View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20384_low_211 (Length: 255)
Name: NF20384_low_211
Description: NF20384
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20384_low_211 |
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Alignment Details
Target: chr4 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 16 - 238
Target Start/End: Original strand, 21434583 - 21434800
Alignment:
| Q |
16 |
agaagtaaaaagaaagataaggaataattttatccaaagttaaacttaaaaattctatcataatgtcgttttgatatttgccaaatttaccgtttatcta |
115 |
Q |
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| T |
21434583 |
agaagtaaaaagaaagataaggaataattttatccaaagttaaacttaaaaattctatcataatgtcgttttgatatttgccaaatttaccgtttatcta |
21434682 |
T |
|
| Q |
116 |
aatatacatcaagtcaaaaagcaagaaggctggaaaaccagaaacaaaaaccccagaaatacatcatagaccatgtacttcttaagagtattgtcttaca |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
21434683 |
aatatacatcaagtcaaaaagcaagaaggctggaaaaccagaaacaaaaaccccagaaatacatcatagaccatgtacttcttaagagta-----ttaca |
21434777 |
T |
|
| Q |
216 |
cactaatattcaatcataatatt |
238 |
Q |
| |
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||||||| ||||| ||||||||| |
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| T |
21434778 |
cactaatgttcaagcataatatt |
21434800 |
T |
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