View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF20384_low_86 (Length: 411)
Name: NF20384_low_86
Description: NF20384
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20384_low_86 |
 | |
|
| [»] scaffold0005 (1 HSPs) |
| | |
|
Alignment Details
Target: chr3 (Bit Score: 272; Significance: 1e-152; HSPs: 6)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 22 - 398
Target Start/End: Original strand, 40924242 - 40924623
Alignment:
| Q |
22 |
tcttgtgttaagatttgttgataaagctggtttaatacaagagagattgtttgatgtggcacgtgttaatgacactgcttccttaactcttaaggaagca |
121 |
Q |
| |
|
|||||||||||| |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
40924242 |
tcttgtgttaaggtttgttgataaagctggtttgatacaagagagattttttgatgtggcacgtgttaatgacactgcttccttaactcttaaggaagca |
40924341 |
T |
|
| Q |
122 |
atatgttgtatactttctcgacataaccttgatctttctaacattcgtggtcaaaggtatgacgatgctagcaatatgagaggagaatgaaatgttttac |
221 |
Q |
| |
|
||||| |||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||||| |||| ||||| |
|
|
| T |
40924342 |
gtatgtggtatactttctcgacataaccttgatgtttctaacattcgtggtcaagggtatgacggtgctagcaatatgagaggagaatggaatggtttac |
40924441 |
T |
|
| Q |
222 |
aagcactttttatgaaagattgtccttatgcttactatgt-cattgttttgctcatcggttgtaacttccctta--tactgcatcaagagaagttacatt |
318 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| ||||| ||||| ||||||||||||||||||| ||| |
|
|
| T |
40924442 |
aagcactttttatgaaagattgtccttatgcttactatgtccactgttttgctcatcggttgcaacttgccttagttactgcatcaagagaagttgcatc |
40924541 |
T |
|
| Q |
319 |
aattcatcaattc--tgagaagctgacttttgttgtcaatgttgttggttcttctactaatcaccatgacgagttccaagct |
398 |
Q |
| |
|
||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| | |||||| ||||| |||||| |
|
|
| T |
40924542 |
aattcataaattctttgagaagctgacttttgttgtcaatgttgttggttcttctactaagcgccatgatgagttacaagct |
40924623 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 22 - 398
Target Start/End: Original strand, 2735196 - 2735577
Alignment:
| Q |
22 |
tcttgtgttaagatttgttgataaagctggtttaatacaagagagattgtttgatgtggcacgtgttaatgacactgcttccttaactcttaaggaagca |
121 |
Q |
| |
|
|||||||||||| |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2735196 |
tcttgtgttaaggtttgttgataaagctggtttgatacaagagagattttttgatgtggcacgtgttaatgacactgcttccttaactcttaaggaagca |
2735295 |
T |
|
| Q |
122 |
atatgttgtatactttctcgacataaccttgatctttctaacattcgtggtcaaaggtatgacgatgctagcaatatgagaggagaatgaaatgttttac |
221 |
Q |
| |
|
||||| |||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||||| |||| ||||| |
|
|
| T |
2735296 |
gtatgtggtatactttctcgacataaccttgatgtttctaacattcgtggtcaagggtatgacggtgctagcaatatgagaggagaatggaatggtttac |
2735395 |
T |
|
| Q |
222 |
aagcactttttatgaaagattgtccttatgcttactatgt-cattgttttgctcatcggttgtaacttccctta--tactgcatcaagagaagttacatt |
318 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| ||||| | ||| ||||||||||||||||||| ||| |
|
|
| T |
2735396 |
aagcactttttatgaaagattgtccttatgcttactatgtccactgttttgctcatcggttgcaacttgctttagttactgcatcaagagaagttgcatc |
2735495 |
T |
|
| Q |
319 |
aattcatcaattc--tgagaagctgacttttgttgtcaatgttgttggttcttctactaatcaccatgacgagttccaagct |
398 |
Q |
| |
|
||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| | |||||| ||||| |||||| |
|
|
| T |
2735496 |
aattcataaattctttgagaagctgacttttgttgtcaatgttgttggttcttctactaagcgccatgatgagttacaagct |
2735577 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 104 - 398
Target Start/End: Complemental strand, 22127930 - 22127631
Alignment:
| Q |
104 |
ttaactcttaaggaagcaatatgttgtatactttctcgacataaccttgatctttctaacattcgtggtcaaaggtatgacgatgctagcaatatgagag |
203 |
Q |
| |
|
|||||||||||||||||| ||||| ||||||||| |||||||||| |||| ||||||||||| |||||||| ||||||||| ||||||||||||||||| |
|
|
| T |
22127930 |
ttaactcttaaggaagcagtatgtggtatactttttcgacataactttgacgtttctaacatttgtggtcaagggtatgacggtgctagcaatatgagag |
22127831 |
T |
|
| Q |
204 |
gagaatgaaatgttttacaagcactttttatgaaagattgtccttatgcttactatgt-cattgttttgctcatcggttgtaacttccctta--tactgc |
300 |
Q |
| |
|
||||||| |||| |||||||||||| |||||||||||||||||||||||||||||||| || ||||| |||||||||||| ||||| ||||| |||||| |
|
|
| T |
22127830 |
gagaatggaatggtttacaagcactatttatgaaagattgtccttatgcttactatgtccactgtttcgctcatcggttgcaacttgccttagttactgc |
22127731 |
T |
|
| Q |
301 |
atcaagagaagttacattaattcatcaattc--tgagaagctgacttttgttgtcaatgttgttggttcttctactaatcaccatgacgagttccaagct |
398 |
Q |
| |
|
||||||||||||| ||| ||||||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||| | |||||| ||||| |||||| |
|
|
| T |
22127730 |
atcaagagaagttgcatcaattcataaattctttgagaagctgatttttgttgtcaatgttgttggttcttctactaagcgccatgatgagttacaagct |
22127631 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 22 - 398
Target Start/End: Complemental strand, 22511115 - 22510734
Alignment:
| Q |
22 |
tcttgtgttaagatttgttgataaagctggtttaatacaagagagattgtttgatgtggcacgtgttaatgacactgcttccttaactcttaaggaagca |
121 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||||||| |||| |||||| || | |||||| | |||| | || |||| |||||||||||| |
|
|
| T |
22511115 |
tcttgtgttaagatttgttgataaagatggtttaatacaagagcgattttttgatatgagatgtgttactagcactacatctttaagtcttaaggaagcg |
22511016 |
T |
|
| Q |
122 |
atatgttgtatactttctcgacataaccttgatctttctaacattcgtggtcaaaggtatgacgatgctagcaatatgagaggagaatgaaatgttttac |
221 |
Q |
| |
|
| ||| ||||||||||||||||||||||||| |||||||| ||| ||||||| ||||| | | ||| |||||||||||||||||||| || | ||||| |
|
|
| T |
22511015 |
gtgtgtgatatactttctcgacataaccttgatgtttctaaccttcatggtcaagggtataatggtgcaagcaatatgagaggagaatggaacggtttac |
22510916 |
T |
|
| Q |
222 |
aagcactttttatgaaagattgtccttatgcttactatgt-cattgttttgctcatcggttgtaacttccctt--atactgcatcaagagaagttacatt |
318 |
Q |
| |
|
||||| | |||||||| ||| |||||||||| ||||| | |||||||||||||| || ||||| |||| |||||||||||||||||| | | |
|
|
| T |
22510915 |
aagcattgtttatgaaggatcgtccttatgcatactacatccattgttttgctcacatattacaacttgccttggttactgcatcaagagaagtcaaacc |
22510816 |
T |
|
| Q |
319 |
aattcatcaattc--tgagaagctgacttttgttgtcaatgttgttggttcttctactaatcaccatgacgagttccaagct |
398 |
Q |
| |
|
|||||| ||||| |||||| ||||||||| ||||||||| |||| |||||||| |||| | ||||| ||||| |||||| |
|
|
| T |
22510815 |
aattcacaaattctttgagaaactgacttttattgtcaatgctgtttgttcttctcctaagcgacatgatgagttacaagct |
22510734 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 24 - 54
Target Start/End: Original strand, 43946317 - 43946347
Alignment:
| Q |
24 |
ttgtgttaagatttgttgataaagctggttt |
54 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
43946317 |
ttgtgttaagatttgttgataaagctggttt |
43946347 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 20554749 - 20554653
Alignment:
| Q |
177 |
ggtatgacgatgctagcaatatgagaggagaatgaaatgttttacaagcactttttatgaaagattgtccttatgcttactat-gtcattgttttgc |
272 |
Q |
| |
|
||||||| | |||||| |||||||| ||| |||| |||| || |||||| | ||| | |||||||||||||||||||| ||| |||||||||||| |
|
|
| T |
20554749 |
ggtatgatggtgctagtaatatgaggggataatggaatggattgcaagcattatttctcaaagattgtccttatgcttattatattcattgttttgc |
20554653 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 264; Significance: 1e-147; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 22 - 398
Target Start/End: Original strand, 31420565 - 31420946
Alignment:
| Q |
22 |
tcttgtgttaagatttgttgataaagctggtttaatacaagagagattgtttgatgtggcacgtgttaatgacactgcttccttaactcttaaggaagca |
121 |
Q |
| |
|
|||||||||||| |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31420565 |
tcttgtgttaaggtttgttgataaagctggtttgatacaagagagattttttgatgtggcacgtgttaatgacactgcttccttaactcttaaggaagca |
31420664 |
T |
|
| Q |
122 |
atatgttgtatactttctcgacataaccttgatctttctaacattcgtggtcaaaggtatgacgatgctagcaatatgagaggagaatgaaatgttttac |
221 |
Q |
| |
|
||||| |||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||||| |||| ||||| |
|
|
| T |
31420665 |
gtatgtggtatactttctcgacataaccttgatgtttctaacattcgtggtcaagggtatgacggtgctagcaatatgagaggagaatggaatggtttac |
31420764 |
T |
|
| Q |
222 |
aagcactttttatgaaagattgtccttatgcttactatgt-cattgttttgctcatcggttgtaacttccctta--tactgcatcaagagaagttacatt |
318 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| ||||| | ||| ||||||||||||||||||| ||| |
|
|
| T |
31420765 |
aagcactttttatgaaagattgtccttatgcttactatgtccactgttttgctcatcggttgcaacttgctttagttactgcatcaagagaagttgcatc |
31420864 |
T |
|
| Q |
319 |
aattcatcaattc--tgagaagctgacttttgttgtcaatgttgttggttcttctactaatcaccatgacgagttccaagct |
398 |
Q |
| |
|
||||||| ||||| | ||||||||||||||||||||||||||||||||||||||||||| | |||||| ||||| |||||| |
|
|
| T |
31420865 |
aattcataaattctttaagaagctgacttttgttgtcaatgttgttggttcttctactaagcgccatgatgagttacaagct |
31420946 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 22 - 376
Target Start/End: Original strand, 41595327 - 41595686
Alignment:
| Q |
22 |
tcttgtgttaagatttgttgataaagctggtttaatacaagagagattgtttgatgtggcacgtgttaatgacactgcttccttaactcttaaggaagca |
121 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||||||| |||| |||||| || | |||||| |||| | || |||| ||||||||||||| |
|
|
| T |
41595327 |
tcttgtgttaagatttgttgataaagatggtttaatacaagagcgattttttgatatgagatgtgttaccagcactacatctttaagtcttaaggaagca |
41595426 |
T |
|
| Q |
122 |
atatgttgtatactttctcgacataaccttgatctttctaacattcgtggtcaaaggtatgacgatgctagcaatatgagaggagaatgaaatgttttac |
221 |
Q |
| |
|
| ||| ||||||||||||||||||||||||| |||||||| ||||||||||| ||||||| | ||| |||||||||||||||||||| || | ||||| |
|
|
| T |
41595427 |
gtgtgtgatatactttctcgacataaccttgatgtttctaaccttcgtggtcaagggtatgatggtgcaagcaatatgagaggagaatggaacggtttac |
41595526 |
T |
|
| Q |
222 |
aagcactttttatgaaagattgtccttatgcttactatgt-cattgttttgctcatcggttgtaacttccctt--atactgcatcaagagaagttacatt |
318 |
Q |
| |
|
||||| | |||||||| |||||||||||||| ||||| | ||||||||||||||| | || ||||| |||| |||||||||||||||||| | | |
|
|
| T |
41595527 |
aagcattgtttatgaaggattgtccttatgcatactacatccattgttttgctcatagattacaacttgccttggttactgcatcaagagaagtcaaacc |
41595626 |
T |
|
| Q |
319 |
aattcatcaattc--tgagaagctgacttttgttgtcaatgttgttggttcttctactaa |
376 |
Q |
| |
|
||||||| ||||| |||||| ||||||||| ||||||||| |||| |||||||| |||| |
|
|
| T |
41595627 |
aattcataaattctttgagaaactgacttttattgtcaatgctgtttgttcttctcctaa |
41595686 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0005 (Bit Score: 260; Significance: 1e-145; HSPs: 1)
Name: scaffold0005
Description:
Target: scaffold0005; HSP #1
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 22 - 398
Target Start/End: Original strand, 41067 - 41448
Alignment:
| Q |
22 |
tcttgtgttaagatttgttgataaagctggtttaatacaagagagattgtttgatgtggcacgtgttaatgacactgcttccttaactcttaaggaagca |
121 |
Q |
| |
|
|||||||||||| |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
41067 |
tcttgtgttaaggtttgttgataaagctggtttgatacaagagagattttttgatgtggcacgtgttaatgacattgcttccttaactcttaaggaagca |
41166 |
T |
|
| Q |
122 |
atatgttgtatactttctcgacataaccttgatctttctaacattcgtggtcaaaggtatgacgatgctagcaatatgagaggagaatgaaatgttttac |
221 |
Q |
| |
|
||||| |||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||||| |||| ||||| |
|
|
| T |
41167 |
gtatgtggtatactttctcgacataaccttgatgtttctaacattcgtggtcaagggtatgacggtgctagcaatatgagaggagaatggaatggtttac |
41266 |
T |
|
| Q |
222 |
aagcactttttatgaaagattgtccttatgcttactatgt-cattgttttgctcatcggttgtaacttccctta--tactgcatcaagagaagttacatt |
318 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||||| || |||||||||||||||||| ||||| ||||| ||||||||||||||||||| ||| |
|
|
| T |
41267 |
aagcactttttatttaagattgtccttatgcttactatgtccactgttttgctcatcggttgcaacttgccttagttactgcatcaagagaagttgcatc |
41366 |
T |
|
| Q |
319 |
aattcatcaattc--tgagaagctgacttttgttgtcaatgttgttggttcttctactaatcaccatgacgagttccaagct |
398 |
Q |
| |
|
||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| | |||||| ||||| |||||| |
|
|
| T |
41367 |
aattcataaattctttgagaagctgacttttgttgtcaatgttgttggttcttctactaagcgccatgatgagttacaagct |
41448 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 260; Significance: 1e-145; HSPs: 3)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 22 - 398
Target Start/End: Complemental strand, 22271841 - 22271460
Alignment:
| Q |
22 |
tcttgtgttaagatttgttgataaagctggtttaatacaagagagattgtttgatgtggcacgtgttaatgacactgcttccttaactcttaaggaagca |
121 |
Q |
| |
|
|||||||||||| |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
22271841 |
tcttgtgttaaggtttgttgataaagctggtttgatacaagagagattttttgatgtggcacgtgttaatgacactgcttccgtaactcttaaggaagca |
22271742 |
T |
|
| Q |
122 |
atatgttgtatactttctcgacataaccttgatctttctaacattcgtggtcaaaggtatgacgatgctagcaatatgagaggagaatgaaatgttttac |
221 |
Q |
| |
|
||||| |||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||||| |||| ||||| |
|
|
| T |
22271741 |
gtatgtggtatactttctcgacataaccttgatgtttctaacattcgtggtcaagggtatgacggtgctagcaatatgagaggagaatggaatggtttac |
22271642 |
T |
|
| Q |
222 |
aagcactttttatgaaagattgtccttatgcttactatgt-cattgttttgctcatcggttgtaacttccctta--tactgcatcaagagaagttacatt |
318 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| ||||| | ||| ||||||||||||||||||| ||| |
|
|
| T |
22271641 |
aagcactttttatgaaagattgtccttatgcttactatgtccactgttttgctcatcggttgcaacttgctttagttactgcatcaagagaagttgcatc |
22271542 |
T |
|
| Q |
319 |
aattcatcaattc--tgagaagctgacttttgttgtcaatgttgttggttcttctactaatcaccatgacgagttccaagct |
398 |
Q |
| |
|
||||||| ||||| | ||||||||||||||||||||||||||||||||||||||||||| | |||||| ||||| |||||| |
|
|
| T |
22271541 |
aattcataaattctttaagaagctgacttttgttgtcaatgttgttggttcttctactaagcgccatgatgagttacaagct |
22271460 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 22 - 376
Target Start/End: Original strand, 14008178 - 14008537
Alignment:
| Q |
22 |
tcttgtgttaagatttgttgataaagctggtttaatacaagagagattgtttgatgtggcacgtgttaatgacactgcttccttaactcttaaggaagca |
121 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||||||| |||| |||||| || | |||||| |||| | || |||| |||||||||||| |
|
|
| T |
14008178 |
tcttgtgttaagatttgttgataaagatggtttaatacaagagcgattttttgatatgagatgtgttaccagcactacatctttaagtcttaaggaagcg |
14008277 |
T |
|
| Q |
122 |
atatgttgtatactttctcgacataaccttgatctttctaacattcgtggtcaaaggtatgacgatgctagcaatatgagaggagaatgaaatgttttac |
221 |
Q |
| |
|
| ||| ||||||||||||||||||||||||| |||||||| ||||||||||| ||||||| | ||| |||||||||||||||||||| || | ||||| |
|
|
| T |
14008278 |
gtgtgtgatatactttctcgacataaccttgatgtttctaaccttcgtggtcaatggtatgatggtgcaagcaatatgagaggagaatggaacggtttac |
14008377 |
T |
|
| Q |
222 |
aagcactttttatgaaagattgtccttatgcttactatgt-cattgttttgctcatcggttgtaacttccctt--atactgcatcaagagaagttacatt |
318 |
Q |
| |
|
||||| | |||||||| |||||||||||||| ||||| | ||||||||||||||| | || ||||| |||| |||||||||||||||||| | | |
|
|
| T |
14008378 |
aagcattgtttatgaaggattgtccttatgcatactacatccattgttttgctcatagattacaacttgccttggttactgcatcaagagaagtcaaacc |
14008477 |
T |
|
| Q |
319 |
aattcatcaattc--tgagaagctgacttttgttgtcaatgttgttggttcttctactaa |
376 |
Q |
| |
|
||||||| ||||| |||||| ||||||||| ||||||||| |||| |||||||| |||| |
|
|
| T |
14008478 |
aattcataaattctttgagaaactgacttttattgtcaatgctgtttgttcttctcctaa |
14008537 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 26 - 398
Target Start/End: Complemental strand, 23122508 - 23122130
Alignment:
| Q |
26 |
gtgttaagatttgttgataaagctggtttaatacaagagagattgtttgatgtggcacgtgttaatgacactgcttccttaactcttaaggaagcaatat |
125 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||| |||| |||||| || | |||||| | |||| | || |||| ||||||||||||| | | |
|
|
| T |
23122508 |
gtgttaagatttgttgataaagatggtttaatacaagagcgattttttgatatgagatgtgttactagcactacatctttaagtcttaaggaagcagtgt |
23122409 |
T |
|
| Q |
126 |
gttgtatactttctcgacataaccttgatctttctaacattcgtggtcaaaggtatgacgatgctagcaatatgagaggagaatgaaatgttttacaagc |
225 |
Q |
| |
|
|| ||||||||||||||||||||||||| |||||||| ||||||||||| ||||||| | ||| |||||||||||||||||||| || | ||||||||| |
|
|
| T |
23122408 |
gtgatatactttctcgacataaccttgatgtttctaaccttcgtggtcaagggtatgatggtgcaagcaatatgagaggagaatggaacggtttacaagc |
23122309 |
T |
|
| Q |
226 |
actttttatgaaagattgtccttatgcttactatgt-cattgttttgctcatcggttgtaacttccctt--atactgcatcaagagaagttacattaatt |
322 |
Q |
| |
|
| | |||||||| |||||||||||||| ||||| | |||||||||||||| | || ||||| |||| |||||||||||| ||||| | | |||| |
|
|
| T |
23122308 |
attgtttatgaaggattgtccttatgcatactacatccattgttttgctcacagattacaactttccttgattactgcatcaagtgaagtcaaaccaatt |
23122209 |
T |
|
| Q |
323 |
catcaattc--tgagaagctgac-ttttgttgtcaatgttgttggttcttctactaatcaccatgacgagttccaagct |
398 |
Q |
| |
|
||| ||||| |||||| ||||| |||| |||||||| |||| |||||||| |||| | ||||| ||||| |||||| |
|
|
| T |
23122208 |
cataaattctttgagaaactgactttttattgtcaataatgtttgttcttctcctaagcgacatgatgagttacaagct |
23122130 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 260; Significance: 1e-145; HSPs: 3)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 22 - 398
Target Start/End: Original strand, 5087294 - 5087675
Alignment:
| Q |
22 |
tcttgtgttaagatttgttgataaagctggtttaatacaagagagattgtttgatgtggcacgtgttaatgacactgcttccttaactcttaaggaagca |
121 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| ||||||||||||| |||| |||||||||||||||||| |
|
|
| T |
5087294 |
tcttgtgttaagatttgttgataaagctggtttgatacaagagagattttttgatgtggcacatgttaatgacacttcttcgttaactcttaaggaagca |
5087393 |
T |
|
| Q |
122 |
atatgttgtatactttctcgacataaccttgatctttctaacattcgtggtcaaaggtatgacgatgctagcaatatgagaggagaatgaaatgttttac |
221 |
Q |
| |
|
||||| |||||||||||||||||||||||||| |||||||||||||||||||| ||||||| | |||||||||||||||||||||||| ||| ||||| |
|
|
| T |
5087394 |
gtatgtggtatactttctcgacataaccttgatgtttctaacattcgtggtcaagggtatgatggtgctagcaatatgagaggagaatggaattgtttac |
5087493 |
T |
|
| Q |
222 |
aagcactttttatgaaagattgtccttatgcttactatgt-cattgttttgctcatcggttgtaacttccctta--tactgcatcaagagaagttacatt |
318 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||| |
|
|
| T |
5087494 |
aagcactttttatgaaagattgtccttatgcttactatgtccattgttttgctcatcggttgcaacttgccttagttactgcatcaagagaagttacatc |
5087593 |
T |
|
| Q |
319 |
aattcatcaattc--tgagaagctgacttttgttgtcaatgttgttggttcttctactaatcaccatgacgagttccaagct |
398 |
Q |
| |
|
||||||||||||| ||||||| || |||||||||||||||||||||||||||||||||| | |||||| ||||| |||||| |
|
|
| T |
5087594 |
aattcatcaattctttgagaagttggcttttgttgtcaatgttgttggttcttctactaagcgccatgatgagttacaagct |
5087675 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 22 - 376
Target Start/End: Original strand, 43523934 - 43524292
Alignment:
| Q |
22 |
tcttgtgttaagatttgttgataaagctggtttaatacaagagagattgtttgatgtggcacgtgttaatgacactgcttccttaactcttaaggaagca |
121 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||||||| |||| |||||| || | |||||| |||| | || |||| |||||||||||| |
|
|
| T |
43523934 |
tcttgtgttaagatttgttgataaagatggtttaatacaagagcgatt-tttgatatgagatgtgttaccagcactacatctttaagtcttaaggaagcg |
43524032 |
T |
|
| Q |
122 |
atatgttgtatactttctcgacataaccttgatctttctaacattcgtggtcaaaggtatgacgatgctagcaatatgagaggagaatgaaatgttttac |
221 |
Q |
| |
|
| ||| ||||||||||||||||||||||||| |||||||| ||||||||||| ||||||| | ||| |||||||||||||||||||| || | ||||| |
|
|
| T |
43524033 |
gtgtgtgatatactttctcgacataaccttgatgtttctaaccttcgtggtcaagggtatgatggtgcaagcaatatgagaggagaatggaacggtttac |
43524132 |
T |
|
| Q |
222 |
aagcactttttatgaaagattgtccttatgcttactatgt-cattgttttgctcatcggttgtaacttccctt--atactgcatcaagagaagttacatt |
318 |
Q |
| |
|
||||| | |||||||| |||||||||||||| ||||| | ||||||||||||||| | || ||||| |||| |||||||||||||||||| | | |
|
|
| T |
43524133 |
aagcattgtttatgaaggattgtccttatgcatactacatccattgttttgctcatagattacaacttgccttggttactgcatcaagagaagtcaaacc |
43524232 |
T |
|
| Q |
319 |
aattcatcaattc--tgagaagctgacttttgttgtcaatgttgttggttcttctactaa |
376 |
Q |
| |
|
||||||| ||||| |||||| ||||||||| ||||||||| |||| |||||||| |||| |
|
|
| T |
43524233 |
aattcataaattctttgagaaactgacttttattgtcaatgctgtttgttcttctcctaa |
43524292 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 333 - 385
Target Start/End: Original strand, 30396794 - 30396846
Alignment:
| Q |
333 |
gagaagctgacttttgttgtcaatgttgttggttcttctactaatcaccatga |
385 |
Q |
| |
|
|||||||| |||||| |||||||||||||| |||||||| |||| | |||||| |
|
|
| T |
30396794 |
gagaagcttacttttattgtcaatgttgtttgttcttctcctaagcgccatga |
30396846 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 258; Significance: 1e-143; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 24 - 398
Target Start/End: Original strand, 95870 - 96249
Alignment:
| Q |
24 |
ttgtgttaagatttgttgataaagctggtttaatacaagagagattgtttgatgtggcacgtgttaatgacactgcttccttaactcttaaggaagcaat |
123 |
Q |
| |
|
||||||||||||||||||||||||||||||| || ||||||||||| ||||||| ||||||||||||||||||| |||| |||||||||||||||||||| |
|
|
| T |
95870 |
ttgtgttaagatttgttgataaagctggtttgatgcaagagagattttttgatgcggcacgtgttaatgacacttcttcgttaactcttaaggaagcaat |
95969 |
T |
|
| Q |
124 |
atgttgtatactttctcgacataaccttgatctttctaacattcgtggtcaaaggtatgacgatgctagcaatatgagaggagaatgaaatgttttacaa |
223 |
Q |
| |
|
|||| |||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||||| |||| ||||||| |
|
|
| T |
95970 |
atgtggtatactttctcgacataaccttgatgtttctaacattcgtggtcaagggtatgacggtgctagcaatatgagaggagaatggaatggtttacaa |
96069 |
T |
|
| Q |
224 |
gcactttttatgaaagattgtccttatgcttactatgt-cattgttttgctcatcggttgtaacttccctta--tactgcatcaagagaagttacattaa |
320 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| ||||| ||||| ||||||||||||||||||||||| || |
|
|
| T |
96070 |
gcactttttatgaaagattgtccttatgcttactatgtccactgttttgctcatcggttgcaacttgccttagttactgcatcaagagaagttacatcaa |
96169 |
T |
|
| Q |
321 |
ttcatcaattc--tgagaagctgacttttgttgtcaatgttgttggttcttctactaatcaccatgacgagttccaagct |
398 |
Q |
| |
|
||||| ||||| ||||||| || |||||||||||||||||||||||||||||||||| | |||||| ||||| |||||| |
|
|
| T |
96170 |
ttcattaattctttgagaagttggcttttgttgtcaatgttgttggttcttctactaagcgccatgatgagttacaagct |
96249 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 27 - 167
Target Start/End: Original strand, 9303448 - 9303588
Alignment:
| Q |
27 |
tgttaagatttgttgataaagctggtttaatacaagagagattgtttgatgtggcacgtgttaatgacactgcttccttaactcttaaggaagcaatatg |
126 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| ||||||||||||||||| |||||||||||||||| | |||| |
|
|
| T |
9303448 |
tgttaagatttgttgataaagctggtttgatacaagagagattttttgatgtggcacatgttaatgacactgctttcttaactcttaaggaaacggtatg |
9303547 |
T |
|
| Q |
127 |
ttgtatactttctcgacataaccttgatctttctaacattc |
167 |
Q |
| |
|
| |||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
9303548 |
tggtatactttctcgacataaccttgatgtttctaacattc |
9303588 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 256; Significance: 1e-142; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 22 - 398
Target Start/End: Complemental strand, 14798661 - 14798280
Alignment:
| Q |
22 |
tcttgtgttaagatttgttgataaagctggtttaatacaagagagattgtttgatgtggcacgtgttaatgacactgcttccttaactcttaaggaagca |
121 |
Q |
| |
|
|||||||||||| |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
14798661 |
tcttgtgttaaggtttgttgataaagctggtttgatacaagagagattttttgatgtggcacgtgttaatgacattgcttccttaactcttaaggaagca |
14798562 |
T |
|
| Q |
122 |
atatgttgtatactttctcgacataaccttgatctttctaacattcgtggtcaaaggtatgacgatgctagcaatatgagaggagaatgaaatgttttac |
221 |
Q |
| |
|
||||| |||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||||| |||| ||||| |
|
|
| T |
14798561 |
gtatgtggtatactttctcgacataaccttgatgtttctaacattcgtggtcaagggtatgacggtgctagcaatatgagaggagaatggaatggtttac |
14798462 |
T |
|
| Q |
222 |
aagcactttttatgaaagattgtccttatgcttactatgt-cattgttttgctcatcggttgtaacttccctta--tactgcatcaagagaagttacatt |
318 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||||| || ||||||||||||||||| ||||| ||||| ||||||||||||||||||| ||| |
|
|
| T |
14798461 |
aagcactttttattgaagattgtccttatgcttactatgtccactgttttgctcatcggttacaacttgccttagttactgcatcaagagaagttgcatc |
14798362 |
T |
|
| Q |
319 |
aattcatcaattc--tgagaagctgacttttgttgtcaatgttgttggttcttctactaatcaccatgacgagttccaagct |
398 |
Q |
| |
|
||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| | |||||| ||||| |||||| |
|
|
| T |
14798361 |
aattcataaattctttgagaagctgacttttgttgtcaatgttgttggttcttctactaagcgccatgatgagttacaagct |
14798280 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 104 - 276
Target Start/End: Original strand, 50413754 - 50413927
Alignment:
| Q |
104 |
ttaactcttaaggaagcaatatgttgtatactttctcgacataaccttgatctttctaacattcgtggtcaaaggtatgacgatgctagcaatatgagag |
203 |
Q |
| |
|
|||||||||||||||||| | ||| ||| |||||||||| |||||||||| | |||||| |||| |||||| ||| ||| ||| | ||||||| ||||| |
|
|
| T |
50413754 |
ttaactcttaaggaagcagtgtgtgatatgctttctcgacgtaaccttgatgtgtctaaccttcgcggtcaagggtgtgatgatacaagcaatacgagag |
50413853 |
T |
|
| Q |
204 |
gagaatgaaatgttttacaagcactttttatgaaagattgtccttatgcttactatgt-cattgttttgctcat |
276 |
Q |
| |
|
||||||| |||| || | ||||| | ||||| || ||||||||||||| ||||| | ||||||||||||||| |
|
|
| T |
50413854 |
gagaatggaatggttaataagcattgtttattaaggattgtccttatgtatactacatccattgttttgctcat |
50413927 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 22 - 64
Target Start/End: Complemental strand, 18839176 - 18839134
Alignment:
| Q |
22 |
tcttgtgttaagatttgttgataaagctggtttaatacaagag |
64 |
Q |
| |
|
|||||||||||||||||| |||||| |||||||||||||||| |
|
|
| T |
18839176 |
tcttgtgttaagatttgtggataaaattggtttaatacaagag |
18839134 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 210; Significance: 1e-115; HSPs: 5)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 22 - 363
Target Start/End: Original strand, 33362205 - 33362548
Alignment:
| Q |
22 |
tcttgtgttaagatttgttgataaagctggtttaatacaagagagattgtttgatgtggcacgtgttaatgacactgcttccttaactcttaaggaagca |
121 |
Q |
| |
|
|||||||||||| |||||||||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
33362205 |
tcttgtgttaaggtttgttgataaa--tggtttggtacaagagagattttttgatgtggcacgtgttaatgacactgcttccttaactcttaatgaagca |
33362302 |
T |
|
| Q |
122 |
atatgttgtatactttctcgacataaccttgatctttctaacattcgtggtcaaaggtatgacgatgctagcaatatgagaggagaatgaaatgttttac |
221 |
Q |
| |
|
||||| |||||||||||||||||||||||||| |||| ||||||||||||||| ||||||||| |||||| ||||||||||||||||| |||| ||||| |
|
|
| T |
33362303 |
gtatgtggtatactttctcgacataaccttgatgtttcaaacattcgtggtcaagggtatgacggtgctagaaatatgagaggagaatggaatggtttac |
33362402 |
T |
|
| Q |
222 |
aagcactttttatgaaagattgtccttatgcttactatgt-cattgttttgctcatcggttgtaacttccctta--tactgcatcaagagaagttacatt |
318 |
Q |
| |
|
|||| || |||||||||||||||||||||||||||||||| || |||||||||||||||||| ||||| ||||| ||||||||||||||||||| ||| |
|
|
| T |
33362403 |
aagc-ctatttatgaaagattgtccttatgcttactatgtccactgttttgctcatcggttgcaacttgccttagttactgcatcaagagaagttgcatc |
33362501 |
T |
|
| Q |
319 |
aattcatcaattc--tgagaagctgacttttgttgtcaatgttgttg |
363 |
Q |
| |
|
||||||| ||||| ||||||||||| |||||||||||||||||||| |
|
|
| T |
33362502 |
aattcataaattctttgagaagctgatttttgttgtcaatgttgttg |
33362548 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 295 - 398
Target Start/End: Original strand, 33362566 - 33362671
Alignment:
| Q |
295 |
tactgcatcaagagaagttacattaattcatcaattct--gagaagctgacttttgttgtcaatgttgttggttcttctactaatcaccatgacgagttc |
392 |
Q |
| |
|
||||||||||||||||||| ||| ||||||| |||||| |||||||||| ||||||||||||||||||||||||||||||||| | |||||| ||||| |
|
|
| T |
33362566 |
tactgcatcaagagaagttgcatcaattcataaattctttgagaagctgatttttgttgtcaatgttgttggttcttctactaagcgccatgatgagtta |
33362665 |
T |
|
| Q |
393 |
caagct |
398 |
Q |
| |
|
|||||| |
|
|
| T |
33362666 |
caagct |
33362671 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 130 - 258
Target Start/End: Complemental strand, 42467522 - 42467394
Alignment:
| Q |
130 |
tatactttctcgacataaccttgatctttctaacattcgtggtcaaaggtatgacgatgctagcaatatgagaggagaatgaaatgttttacaagcactt |
229 |
Q |
| |
|
|||||||||||||||||| |||||| |||||||||||||||||||| | ||||||| | | || ||||||||| | |||| |||| ||||||||||| |
|
|
| T |
42467522 |
tatactttctcgacataatcttgatgtttctaacattcgtggtcaaggttatgacggtacctgcgatatgagagaacaatggaatggcttacaagcacta |
42467423 |
T |
|
| Q |
230 |
tttatgaaagattgtccttatgcttacta |
258 |
Q |
| |
|
||| |||| | ||||||| ||| ||||| |
|
|
| T |
42467422 |
tttttgaatcaatgtccttctgcatacta |
42467394 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 130 - 248
Target Start/End: Complemental strand, 42480087 - 42479969
Alignment:
| Q |
130 |
tatactttctcgacataaccttgatctttctaacattcgtggtcaaaggtatgacgatgctagcaatatgagaggagaatgaaatgttttacaagcactt |
229 |
Q |
| |
|
||||||||||| ||||| |||||| |||||||||||||||||||| ||||||| | | | || | ||||||| | |||| |||| |||||| ||||| |
|
|
| T |
42480087 |
tatactttctcagcataatcttgatgtttctaacattcgtggtcaagggtatgatggtacctgcgaaatgagagaacaatggaatggtttacatgcacta |
42479988 |
T |
|
| Q |
230 |
tttatgaaagattgtcctt |
248 |
Q |
| |
|
||| |||| || ||||||| |
|
|
| T |
42479987 |
tttttgaatgaatgtcctt |
42479969 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 130 - 183
Target Start/End: Complemental strand, 42472841 - 42472788
Alignment:
| Q |
130 |
tatactttctcgacataaccttgatctttctaacattcgtggtcaaaggtatga |
183 |
Q |
| |
|
||||||||||||||| || |||||| ||||||| |||||||||||| ||||||| |
|
|
| T |
42472841 |
tatactttctcgacacaatcttgatgtttctaatattcgtggtcaagggtatga |
42472788 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 182; Significance: 3e-98; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 22 - 376
Target Start/End: Original strand, 25535838 - 25536195
Alignment:
| Q |
22 |
tcttgtgttaagatttgttgataaagctggtttaatacaagagagattgtttgatgtggcacgtgttaatgacactgcttccttaactcttaaggaagca |
121 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||| | | |||||| ||||||||||||||||| | ||||||||||||||||||||| | |
|
|
| T |
25535838 |
tcttgtgttaagatttgttgataaagcttgtttaatacaagagaaaat-tttgatacggcacgtgttaatgacatttcttccttaactcttaaggaagta |
25535936 |
T |
|
| Q |
122 |
atatgttgtatactttctcgacataaccttgatctttctaacattcgtggtcaaaggtatgacgatgctagcaatatgagaggagaatgaaatgttttac |
221 |
Q |
| |
|
||||| ||||||||||| |||||||||||||| ||||||||| |||||| ||| ||||||| | || ||| ||||||||||||||||| |||| ||||| |
|
|
| T |
25535937 |
gtatgtggtatactttctagacataaccttgatgtttctaacaatcgtggccaatggtatgaaggtgttagtaatatgagaggagaatggaatggtttac |
25536036 |
T |
|
| Q |
222 |
aagcactttttatgaaagattgtccttatgcttactatgt-cattgttttgctcatcggttgtaacttccctta--tactgcatcaagagaagttacatt |
318 |
Q |
| |
|
|||||| |||| | |||||||||||||||||||||||||| || | | ||| |||||| ||| ||||| ||||| ||||||||||||||||||||||| |
|
|
| T |
25536037 |
aagcac-ttttctaaaagattgtccttatgcttactatgtccactatcttgttcatcgattgcaacttaccttagttactgcatcaagagaagttacatc |
25536135 |
T |
|
| Q |
319 |
aattcatcaattc--tgagaagctgacttttgttgtcaatgttgttggttcttctactaa |
376 |
Q |
| |
|
||||||||||||| ||||||| || |||||||||||||||||||||||||||||||||| |
|
|
| T |
25536136 |
aattcatcaattctttgagaagttggcttttgttgtcaatgttgttggttcttctactaa |
25536195 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 26 - 398
Target Start/End: Complemental strand, 11053976 - 11053622
Alignment:
| Q |
26 |
gtgttaagatttgttgataaagctggtttaatacaag-agagattgtttgatgtggcacgtgttaatgacactgcttccttaactcttaaggaagcaata |
124 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||| | ||||||| |||||||||| ||||||||||||||||||||||||||| |||||||| || ||| |
|
|
| T |
11053976 |
gtgttaagatttgttgataaagctggttttatacagggagagattttttgatgtggtacgtgttaatgacactgcttccttaacacttaaggacgctata |
11053877 |
T |
|
| Q |
125 |
tgttgtatactttctcgacataaccttgatctttctaacattcgtggtcaaaggtatgacgatgctagcaatatgagaggagaatgaaatgttttacaag |
224 |
Q |
| |
|
||| || ||| ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
11053876 |
tgtggt---------cgatataaccttgatgtttctaacattcgtggt-------atgacgatgctagcaatatgagaggagaatgaaatggtttacaaa |
11053793 |
T |
|
| Q |
225 |
cactttttatgaaagattgtccttatgcttactatgt-cattgttttgctcatcggttgtaacttccctta--tactgcatcaagagaagttacattaat |
321 |
Q |
| |
|
||||||||||||||||||||| |||| |||||||||| || | |||||||||||||||| ||| | ||||| ||||||||||||||||||||||| ||| |
|
|
| T |
11053792 |
cactttttatgaaagattgtcattatacttactatgtccactattttgctcatcggttgcaacctgccttagttactgcatcaagagaagttacatcaat |
11053693 |
T |
|
| Q |
322 |
tcatcaattctgagaagctgacttttgttgtcaatgttgttggttcttctactaatcaccatgacgagttccaagct |
398 |
Q |
| |
|
|| | |||||||||| ||||||||||||||||||||||||||||||||| | |||||| ||||| |||||| |
|
|
| T |
11053692 |
tc------tttgagaagctggtttttgttgtcaatgttgttggttcttctactaagcgccatgatgagttacaagct |
11053622 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 123 - 294
Target Start/End: Original strand, 27132116 - 27132288
Alignment:
| Q |
123 |
tatgttgtatactttctcgacataaccttgatctttctaacattcgtggtcaaaggtatgacgatgctagcaatatgagaggagaatgaaatgttttaca |
222 |
Q |
| |
|
||||| |||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| |||| ||||||||||||||||||| |||| |||||| |
|
|
| T |
27132116 |
tatgtggtatactttctcgacataaccttgatgtttctaacattcgtggtcaagggtatgacggtgctggcaatatgagaggagaatggaatggtttaca |
27132215 |
T |
|
| Q |
223 |
agcactttttatgaaagattgtccttatgcttactatgt-cattgttttgctcatcggttgtaacttccctta |
294 |
Q |
| |
|
| || |||||| ||||||||||||||||||||||||||| || | |||| ||||||||||| ||||| ||||| |
|
|
| T |
27132216 |
aacaatttttaagaaagattgtccttatgcttactatgtccactatttttctcatcggttgcaacttgcctta |
27132288 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 35 - 120
Target Start/End: Original strand, 27129857 - 27129942
Alignment:
| Q |
35 |
tttgttgataaagctggtttaatacaagagagattgtttgatgtggcacgtgttaatgacactgcttccttaactcttaaggaagc |
120 |
Q |
| |
|
|||||||||||||||||||| ||||| || ||||| |||||| |||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
27129857 |
tttgttgataaagctggtttgatacacgaaagattttttgatatggcacgtgtaaatgacactgcttccttaactcttaaggaagc |
27129942 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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