View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20387_low_13 (Length: 253)
Name: NF20387_low_13
Description: NF20387
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20387_low_13 |
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Alignment Details
Target: chr3 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 4 - 238
Target Start/End: Complemental strand, 34915750 - 34915516
Alignment:
| Q |
4 |
cataggtaaaattatcactaagatcaaaatttttgaccccggaaacaggattgaaaaaggtactactattcacattaaatttatcaatgtgattaaaatc |
103 |
Q |
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| T |
34915750 |
cataggtaaaattatcactaagatcaaaatttttgaccccggagacaggattgaaaaaggtactactattcacattaaatttatcaatgtgattaaaatc |
34915651 |
T |
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| Q |
104 |
ttgnnnnnnnccatgagatgaaggaaccactccaaaaggattctcataattttttatgttggatttcaagtggtaattttcttgtaaaaaatttgtctga |
203 |
Q |
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||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34915650 |
ttgaaagaaaccatgagatgaaggaaccactccaaaaggattctcataattttttatgttggatttcaagtggtaattttcttgtaaaaaatttgtctga |
34915551 |
T |
|
| Q |
204 |
aaatccattgacataaagtgcaacagaaaataatg |
238 |
Q |
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||||||||||||||||||||||||||||||||||| |
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| T |
34915550 |
aaatccattgacataaagtgcaacagaaaataatg |
34915516 |
T |
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