View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2038_high_19 (Length: 351)
Name: NF2038_high_19
Description: NF2038
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2038_high_19 |
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Alignment Details
Target: chr1 (Bit Score: 211; Significance: 1e-115; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 1 - 260
Target Start/End: Complemental strand, 3912107 - 3911848
Alignment:
| Q |
1 |
taataattaaaaattcaaacttttaagtgttttgtccaacccccttcatcaaaaaacacagnnnnnnncacctggagtattcagctttgtaacaatgaca |
100 |
Q |
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| T |
3912107 |
taataattaaaaattcaaacttttaagtgttttgtccaatacccttcatcaaaaaacaaagaaaaaagcacatggagtattcagctttgtaacaatgaca |
3912008 |
T |
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| Q |
101 |
accctcacaatcacaacttgttgacaaagcttcaaactttgaatattgttgtgttctctccattccaaaaagggaacaataagaaaaacaaccttggaag |
200 |
Q |
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| T |
3912007 |
accataaaaatcacaacttgttgacaaagcttcaaactttgaatattgttgtgttctctccattccaaaaagggaacaataagaaaaacaaccttggaag |
3911908 |
T |
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| Q |
201 |
agtaaaactacaacactcaccatcatctgattccactgaattgacattgaaacaactgag |
260 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3911907 |
agtaaaactacaacactcaccatcatctgattccactgaattgacattgaaacaactgag |
3911848 |
T |
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