View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF2038_high_26 (Length: 233)
Name: NF2038_high_26
Description: NF2038
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2038_high_26 |
 | |
|
Alignment Details
Target: chr3 (Bit Score: 188; Significance: 1e-102; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 13 - 212
Target Start/End: Complemental strand, 44696631 - 44696432
Alignment:
| Q |
13 |
tcgaagaatatagtaagtcaaaacccaatttcagcttcttcttcacaaacagtactaagctgccatcaaataggattagggtttgaagataagggtttag |
112 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
44696631 |
tcgaagaaaatagtaagtcaaaacccaatttcagcttcttcttcacaaacagtactaagctgccctcaaataggattagggtttgaagataagggtttag |
44696532 |
T |
|
| Q |
113 |
gtttagaatcaattagaaaaggtaaagaaggattggaaggcttgaattgctataatgaccatcatcataatggcatgttatcatcaccaccatcatcatc |
212 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
44696531 |
gtttagaatcaattagaaaaggtaaagaaggattagaaggcttgaattgctataatgaccatcatcataatggcatgttatcatcaccaccatcatcatc |
44696432 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University