View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2038_low_16 (Length: 368)
Name: NF2038_low_16
Description: NF2038
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2038_low_16 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 356; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 356; E-Value: 0
Query Start/End: Original strand, 5 - 368
Target Start/End: Original strand, 37110876 - 37111239
Alignment:
| Q |
5 |
aaccatgttttctcctaaattttattccattttcacagtgctaatattcctccttcttaatccatcacatgctcaattgacctcaacattctactccaac |
104 |
Q |
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| T |
37110876 |
aaccatgttttctcctaaattttattccattttcacagtgctaatattcctccttcttaatccatcacatgctcaattgacctcaacattctactccaac |
37110975 |
T |
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| Q |
105 |
acatgccccagtgtttcttctatagtaagaaatgttgttcaacaagctctgcaaaatgatcctcgtattaccgcaagcctaacccgtcttcactttcccg |
204 |
Q |
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| T |
37110976 |
acatgccccagtgtttcttctatagtaagaaatgttgttcaacaagctctgcaaaatgatcctcgtattaccgcgagcctaacccgtcttcactttcacg |
37111075 |
T |
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| Q |
205 |
attgctttgttaatgtaatttcttatacattttgattaatgagccagaatttaggtgattgattaataactaatgtccttaatttgtgtattgcagggat |
304 |
Q |
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| T |
37111076 |
attgctttgttaatgtaatttcttatacattttgattaatgagccagaatttaggtgattgattaataactaatgtccttaatttgtgtattgcagggat |
37111175 |
T |
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| Q |
305 |
gtgatgcatctcttttattagatcaaggtggaaacataacactaagtgagaaaaatgctgttcc |
368 |
Q |
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| T |
37111176 |
gtgatgcatctcttttattagatcaaggtggaaacataacactaagtgagaaaaatgctgttcc |
37111239 |
T |
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