View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2038_low_17 (Length: 364)

Name: NF2038_low_17
Description: NF2038
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2038_low_17
NF2038_low_17
[»] chr3 (43 HSPs)
chr3 (101-348)||(43299597-43299844)
chr3 (1-99)||(12349278-12349376)
chr3 (1-99)||(4851563-4851661)
chr3 (1-99)||(21221467-21221565)
chr3 (1-99)||(28675670-28675768)
chr3 (3-99)||(26282496-26282592)
chr3 (1-99)||(1344814-1344912)
chr3 (1-99)||(2134950-2135048)
chr3 (1-99)||(29584755-29584853)
chr3 (1-99)||(51259887-51259985)
chr3 (1-99)||(53046748-53046846)
chr3 (1-99)||(3864781-3864879)
chr3 (1-99)||(53557902-53558000)
chr3 (3-99)||(5442171-5442267)
chr3 (1-99)||(25860528-25860626)
chr3 (1-99)||(43175449-43175547)
chr3 (1-99)||(24571162-24571259)
chr3 (1-99)||(47958539-47958637)
chr3 (1-69)||(40094413-40094481)
chr3 (3-99)||(51925317-51925412)
chr3 (1-99)||(25927434-25927533)
chr3 (14-99)||(22484862-22484947)
chr3 (1-99)||(39052945-39053044)
chr3 (1-99)||(38213234-38213332)
chr3 (14-99)||(31883141-31883226)
chr3 (60-99)||(20254955-20254994)
chr3 (1-59)||(44116859-44116917)
chr3 (14-99)||(50386575-50386660)
chr3 (1-56)||(20609755-20609810)
chr3 (1-56)||(34026590-34026645)
chr3 (14-99)||(10747098-10747183)
chr3 (14-99)||(33364897-33364982)
chr3 (5-66)||(42636514-42636575)
chr3 (14-99)||(54964001-54964086)
chr3 (60-99)||(3867809-3867848)
chr3 (60-99)||(20609799-20609838)
chr3 (60-99)||(34026562-34026601)
chr3 (60-99)||(44116834-44116873)
chr3 (5-99)||(29645946-29646039)
chr3 (45-99)||(41695031-41695084)
chr3 (50-99)||(21373820-21373869)
chr3 (14-91)||(45691019-45691096)
chr3 (1-33)||(20254991-20255023)
[»] chr7 (49 HSPs)
chr7 (101-348)||(27646525-27646772)
chr7 (1-99)||(32873883-32873981)
chr7 (1-99)||(18470567-18470665)
chr7 (1-99)||(36769683-36769781)
chr7 (1-99)||(46633580-46633678)
chr7 (1-93)||(47947649-47947741)
chr7 (1-93)||(47953079-47953171)
chr7 (1-99)||(3922817-3922915)
chr7 (1-99)||(41211315-41211413)
chr7 (1-99)||(3892140-3892238)
chr7 (1-99)||(12982186-12982284)
chr7 (1-99)||(21784754-21784852)
chr7 (1-99)||(26994339-26994437)
chr7 (1-99)||(30599122-30599220)
chr7 (3-95)||(26371925-26372017)
chr7 (1-99)||(1870017-1870115)
chr7 (1-99)||(10932671-10932769)
chr7 (1-99)||(11321999-11322097)
chr7 (1-99)||(18386408-18386506)
chr7 (1-99)||(30849360-30849458)
chr7 (1-99)||(43189357-43189455)
chr7 (1-99)||(43158800-43158898)
chr7 (14-99)||(23349417-23349502)
chr7 (25-99)||(46408779-46408853)
chr7 (3-98)||(11822116-11822210)
chr7 (14-96)||(22724657-22724739)
chr7 (3-84)||(1363536-1363616)
chr7 (14-99)||(43368085-43368170)
chr7 (1-99)||(21133254-21133352)
chr7 (14-99)||(329354-329439)
chr7 (14-99)||(9913409-9913494)
chr7 (14-99)||(9927097-9927182)
chr7 (46-99)||(47316842-47316895)
chr7 (51-99)||(34117356-34117404)
chr7 (1-56)||(40753081-40753136)
chr7 (1-99)||(16962995-16963088)
chr7 (14-100)||(48445404-48445490)
chr7 (14-99)||(34295530-34295615)
chr7 (1-56)||(29661249-29661304)
chr7 (14-99)||(22724158-22724243)
chr7 (14-99)||(41665701-41665786)
chr7 (1-54)||(47442765-47442818)
chr7 (3-99)||(48894601-48894696)
chr7 (60-99)||(40753053-40753092)
chr7 (60-99)||(47442735-47442774)
chr7 (66-99)||(26910585-26910618)
chr7 (26-99)||(38301232-38301305)
chr7 (58-99)||(46448799-46448840)
chr7 (1-41)||(11250563-11250603)
[»] chr4 (59 HSPs)
chr4 (1-99)||(52319208-52319306)
chr4 (1-99)||(20802637-20802735)
chr4 (1-99)||(23521762-23521860)
chr4 (3-99)||(37865635-37865731)
chr4 (1-99)||(12600768-12600866)
chr4 (1-99)||(24002220-24002318)
chr4 (1-99)||(49152205-49152303)
chr4 (1-99)||(21579908-21580006)
chr4 (1-99)||(43640981-43641079)
chr4 (1-99)||(56154503-56154601)
chr4 (1-99)||(55065439-55065536)
chr4 (3-95)||(29785645-29785737)
chr4 (1-99)||(9512446-9512544)
chr4 (1-77)||(6776482-6776558)
chr4 (1-95)||(14296483-14296577)
chr4 (1-99)||(21202622-21202720)
chr4 (1-99)||(33177138-33177236)
chr4 (1-95)||(14314731-14314825)
chr4 (1-99)||(36743794-36743892)
chr4 (38-99)||(42869864-42869925)
chr4 (3-99)||(9807039-9807134)
chr4 (1-69)||(20518128-20518196)
chr4 (1-99)||(55593764-55593865)
chr4 (5-99)||(34929797-34929891)
chr4 (3-99)||(2786847-2786942)
chr4 (15-95)||(44649281-44649361)
chr4 (1-56)||(29616095-29616150)
chr4 (1-96)||(38486363-38486453)
chr4 (45-99)||(46680640-46680694)
chr4 (14-99)||(22318502-22318587)
chr4 (46-99)||(36885828-36885881)
chr4 (3-56)||(53343585-53343638)
chr4 (1-56)||(33552948-33553003)
chr4 (60-99)||(36497114-36497153)
chr4 (1-99)||(20694258-20694351)
chr4 (1-91)||(54542881-54542970)
chr4 (3-96)||(37695649-37695741)
chr4 (58-99)||(37931803-37931844)
chr4 (14-99)||(50178611-50178696)
chr4 (14-99)||(52949604-52949689)
chr4 (1-45)||(4325727-4325771)
chr4 (3-99)||(7555065-7555160)
chr4 (4-99)||(13110211-13110305)
chr4 (60-99)||(33552992-33553031)
chr4 (1-56)||(47361515-47361570)
chr4 (45-99)||(32181166-32181220)
chr4 (3-95)||(16320408-16320499)
chr4 (1-41)||(24210258-24210298)
chr4 (3-99)||(29592783-29592873)
chr4 (47-99)||(38520446-38520498)
chr4 (51-99)||(38812422-38812470)
chr4 (1-56)||(2725238-2725293)
chr4 (3-54)||(44324450-44324500)
chr4 (66-99)||(2725288-2725321)
chr4 (14-99)||(3649519-3649604)
chr4 (3-88)||(7001748-7001832)
chr4 (14-99)||(50186411-50186496)
chr4 (15-59)||(32081080-32081124)
chr4 (1-33)||(36885879-36885911)
[»] chr8 (38 HSPs)
chr8 (1-99)||(32020129-32020227)
chr8 (3-99)||(34063007-34063103)
chr8 (1-99)||(31513711-31513809)
chr8 (1-99)||(32303713-32303811)
chr8 (1-99)||(45446334-45446432)
chr8 (1-99)||(29563354-29563452)
chr8 (1-99)||(6386455-6386553)
chr8 (1-99)||(8673183-8673281)
chr8 (1-99)||(13407063-13407161)
chr8 (1-95)||(27103842-27103936)
chr8 (1-99)||(41709656-41709754)
chr8 (1-99)||(34101387-34101485)
chr8 (3-99)||(15001346-15001442)
chr8 (1-83)||(5968992-5969074)
chr8 (1-99)||(12753453-12753550)
chr8 (1-99)||(31731943-31732041)
chr8 (16-99)||(45113935-45114018)
chr8 (1-99)||(3251784-3251882)
chr8 (1-99)||(29672451-29672549)
chr8 (15-99)||(21272592-21272676)
chr8 (3-99)||(37618522-37618617)
chr8 (31-99)||(955094-955162)
chr8 (7-99)||(17805569-17805661)
chr8 (1-56)||(37861803-37861858)
chr8 (1-99)||(7394942-7395040)
chr8 (1-99)||(25478127-25478220)
chr8 (14-99)||(35225542-35225627)
chr8 (3-99)||(40388920-40389015)
chr8 (1-56)||(4052404-4052459)
chr8 (1-56)||(30543150-30543205)
chr8 (14-99)||(37474599-37474684)
chr8 (60-99)||(4052376-4052415)
chr8 (60-99)||(14005216-14005255)
chr8 (1-56)||(37664411-37664466)
chr8 (14-99)||(22999137-22999222)
chr8 (14-99)||(30501025-30501110)
chr8 (1-56)||(14005172-14005227)
chr8 (60-99)||(37664455-37664494)
[»] chr6 (35 HSPs)
chr6 (1-99)||(15277089-15277187)
chr6 (1-99)||(2614775-2614873)
chr6 (1-99)||(17867714-17867812)
chr6 (1-99)||(17877497-17877595)
chr6 (8-99)||(32805357-32805448)
chr6 (1-99)||(29814744-29814842)
chr6 (1-99)||(28502338-28502437)
chr6 (1-99)||(4494250-4494348)
chr6 (1-99)||(11212136-11212234)
chr6 (1-99)||(24203242-24203340)
chr6 (1-99)||(24242543-24242641)
chr6 (1-99)||(3259557-3259660)
chr6 (3-99)||(10959880-10959975)
chr6 (3-95)||(32410006-32410098)
chr6 (3-99)||(31870254-31870349)
chr6 (1-96)||(10324263-10324358)
chr6 (1-91)||(15277432-15277522)
chr6 (1-66)||(32132532-32132597)
chr6 (3-99)||(3932961-3933057)
chr6 (46-99)||(11279018-11279071)
chr6 (31-99)||(11381972-11382040)
chr6 (16-99)||(17443142-17443225)
chr6 (46-99)||(11613973-11614026)
chr6 (3-99)||(23636103-23636198)
chr6 (1-56)||(167075-167130)
chr6 (15-98)||(29054239-29054322)
chr6 (1-56)||(34176752-34176807)
chr6 (26-99)||(34684162-34684235)
chr6 (16-99)||(14925622-14925705)
chr6 (16-99)||(18057399-18057482)
chr6 (14-88)||(32859942-32860016)
chr6 (16-94)||(11675541-11675619)
chr6 (50-99)||(10485038-10485087)
chr6 (15-99)||(8178048-8178132)
chr6 (43-99)||(34176724-34176780)
[»] chr2 (39 HSPs)
chr2 (1-99)||(2085951-2086049)
chr2 (1-99)||(37308535-37308633)
chr2 (1-99)||(39461193-39461291)
chr2 (1-99)||(16104153-16104251)
chr2 (1-99)||(18685715-18685813)
chr2 (1-99)||(17540593-17540691)
chr2 (1-99)||(32497794-32497892)
chr2 (1-99)||(34338689-34338787)
chr2 (1-99)||(35114664-35114762)
chr2 (3-99)||(33366489-33366585)
chr2 (1-95)||(4641399-4641493)
chr2 (1-99)||(5278947-5279045)
chr2 (3-96)||(9733045-9733138)
chr2 (1-99)||(2645199-2645297)
chr2 (1-99)||(30326444-30326542)
chr2 (1-99)||(42706237-42706335)
chr2 (3-95)||(40692188-40692280)
chr2 (1-83)||(7258791-7258873)
chr2 (1-99)||(44284516-44284606)
chr2 (9-99)||(30798610-30798698)
chr2 (1-99)||(18793374-18793472)
chr2 (1-99)||(19513802-19513900)
chr2 (1-99)||(42365456-42365554)
chr2 (46-99)||(9717120-9717173)
chr2 (3-99)||(37003983-37004080)
chr2 (14-94)||(28824682-28824762)
chr2 (1-99)||(26418802-26418900)
chr2 (17-99)||(38993196-38993278)
chr2 (16-99)||(27462927-27463010)
chr2 (14-99)||(40832596-40832684)
chr2 (28-99)||(12672593-12672663)
chr2 (1-56)||(33889165-33889220)
chr2 (14-100)||(16178006-16178092)
chr2 (14-99)||(13829318-13829403)
chr2 (13-82)||(26981815-26981884)
chr2 (60-99)||(33889137-33889176)
chr2 (14-99)||(6896049-6896133)
chr2 (3-95)||(3913575-3913666)
chr2 (3-99)||(11114752-11114847)
[»] chr5 (38 HSPs)
chr5 (1-99)||(2351559-2351657)
chr5 (1-99)||(4818259-4818357)
chr5 (1-99)||(11963220-11963318)
chr5 (1-99)||(35701156-35701254)
chr5 (3-95)||(32528598-32528690)
chr5 (3-99)||(34794766-34794862)
chr5 (1-99)||(7523050-7523148)
chr5 (1-99)||(40182343-40182441)
chr5 (1-99)||(41790581-41790679)
chr5 (14-99)||(4689829-4689914)
chr5 (1-99)||(8136718-8136816)
chr5 (1-91)||(6284418-6284508)
chr5 (30-99)||(548227-548296)
chr5 (15-99)||(20119650-20119734)
chr5 (4-99)||(21739283-21739373)
chr5 (1-99)||(39918387-39918484)
chr5 (14-99)||(24036112-24036197)
chr5 (1-82)||(40489233-40489314)
chr5 (1-69)||(31770710-31770778)
chr5 (1-99)||(5673023-5673121)
chr5 (1-86)||(700720-700805)
chr5 (14-99)||(7770410-7770495)
chr5 (1-56)||(24181743-24181798)
chr5 (1-56)||(29241300-29241355)
chr5 (1-56)||(39788114-39788169)
chr5 (14-99)||(37148705-37148790)
chr5 (60-99)||(29241272-29241311)
chr5 (1-99)||(22493537-22493635)
chr5 (14-99)||(3735237-3735322)
chr5 (3-56)||(31880197-31880250)
chr5 (1-41)||(5571761-5571801)
chr5 (60-99)||(7208393-7208432)
chr5 (1-56)||(23091423-23091478)
chr5 (60-99)||(24181787-24181826)
chr5 (14-69)||(26180425-26180480)
chr5 (58-95)||(7725984-7726021)
chr5 (14-99)||(31644327-31644411)
chr5 (14-66)||(22432437-22432489)
[»] chr1 (53 HSPs)
chr1 (1-99)||(844912-845010)
chr1 (1-99)||(1351622-1351720)
chr1 (5-99)||(41972800-41972894)
chr1 (1-99)||(35387499-35387597)
chr1 (1-99)||(7183806-7183904)
chr1 (1-99)||(16386742-16386840)
chr1 (1-99)||(17887835-17887933)
chr1 (1-99)||(44738229-44738327)
chr1 (1-99)||(51703350-51703448)
chr1 (3-99)||(24339827-24339923)
chr1 (3-95)||(42510417-42510509)
chr1 (1-95)||(6711234-6711328)
chr1 (3-99)||(38087186-38087281)
chr1 (1-99)||(12890126-12890224)
chr1 (1-99)||(16451015-16451113)
chr1 (1-99)||(28340491-28340589)
chr1 (1-99)||(51264383-51264481)
chr1 (1-99)||(45491063-45491161)
chr1 (1-99)||(32270246-32270339)
chr1 (1-99)||(50540232-50540330)
chr1 (1-95)||(17327837-17327931)
chr1 (1-99)||(41968037-41968135)
chr1 (3-96)||(46154791-46154884)
chr1 (3-99)||(16476345-16476440)
chr1 (1-99)||(3415042-3415140)
chr1 (1-59)||(20495079-20495137)
chr1 (14-99)||(25539744-25539829)
chr1 (14-95)||(26764990-26765071)
chr1 (14-99)||(38663021-38663106)
chr1 (3-99)||(31004021-31004116)
chr1 (1-99)||(1601056-1601159)
chr1 (20-99)||(39281783-39281862)
chr1 (14-99)||(11772832-11772917)
chr1 (14-99)||(50304540-50304625)
chr1 (3-99)||(10384256-10384351)
chr1 (45-99)||(16437266-16437320)
chr1 (14-99)||(6144186-6144271)
chr1 (3-56)||(26118405-26118458)
chr1 (14-93)||(570281-570360)
chr1 (14-89)||(15540090-15540165)
chr1 (60-99)||(26118447-26118486)
chr1 (5-56)||(30105872-30105923)
chr1 (60-99)||(30105912-30105951)
chr1 (5-56)||(34663858-34663909)
chr1 (20-99)||(23799670-23799749)
chr1 (60-99)||(34663830-34663869)
chr1 (5-99)||(16704614-16704707)
chr1 (3-69)||(32289534-32289600)
chr1 (14-99)||(6029501-6029586)
chr1 (14-99)||(8838827-8838912)
chr1 (51-99)||(25343426-25343474)
chr1 (51-99)||(42705465-42705513)
chr1 (14-46)||(47093042-47093074)
[»] scaffold0208 (1 HSPs)
scaffold0208 (1-99)||(2457-2555)
[»] scaffold0054 (1 HSPs)
scaffold0054 (1-99)||(23456-23554)
[»] scaffold0014 (1 HSPs)
scaffold0014 (1-99)||(101828-101926)
[»] scaffold0169 (2 HSPs)
scaffold0169 (1-99)||(12655-12753)
scaffold0169 (1-99)||(18173-18271)
[»] scaffold0027 (1 HSPs)
scaffold0027 (1-99)||(15051-15149)
[»] scaffold0098 (1 HSPs)
scaffold0098 (1-99)||(51318-51416)
[»] scaffold0025 (1 HSPs)
scaffold0025 (14-99)||(5571-5656)
[»] scaffold0729 (1 HSPs)
scaffold0729 (1-77)||(4698-4774)
[»] scaffold0957 (1 HSPs)
scaffold0957 (10-82)||(2623-2695)
[»] scaffold0003 (1 HSPs)
scaffold0003 (63-99)||(338766-338802)
[»] scaffold0181 (1 HSPs)
scaffold0181 (1-54)||(19209-19262)
[»] scaffold0360 (1 HSPs)
scaffold0360 (1-56)||(15496-15551)
[»] scaffold0004 (2 HSPs)
scaffold0004 (1-56)||(373083-373138)
scaffold0004 (60-99)||(373127-373166)


Alignment Details
Target: chr3 (Bit Score: 244; Significance: 1e-135; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 101 - 348
Target Start/End: Complemental strand, 43299844 - 43299597
Alignment:
Q  101 gaaagaatggcagacagagaacatgaagaatcatcatcacctttttacataaccaaataaagactcgaccagctaaaattccagcaacaacccagcttcc 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  43299844 gaaagaatggcagacagagaacatgaagaatcatcatcacctttttacataaccaaataaagactcgaccagctaaaattccagtaacaacccagcttcc 43299745  T
Q  201 agaaccatactcctgcccttcctgtatcaaattaaaacttgcagccaacataacacctgcagccattccgttacacaacccagcccattgcggatcaagc 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43299744 agaaccatactcctgcccttcctgtatcaaattaaaacttgcagccaacataacacctgcagccattccgttacacaacccagcccattgcggatcaagc 43299645  T
Q  301 tctacaaagaagaacggcactgcacctaaaccagtagcagctgccatc 348  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  43299644 tctacaaagaagaacggcactgcacctaaaccagtagcagctgccatc 43299597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 12349278 - 12349376
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||||||||||||||||||||||||||| ||||||||||| || ||||||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  12349278 actcaatgccataaaaaatttgtcatgtgctgttctgccttgtgttgtactgttctatcttgtactgttatgtccaatacttgctcttttgcaaaccaa 12349376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 4851563 - 4851661
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||||||||||||||||||||||| ||| |||||||||||| || |||||||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  4851563 actcaatgccataaaaaatttgtcctgtcttgttctgccttgtgttgtactgttctatcttgtactgttttgtccggtacttgctgttttgcaaaccaa 4851661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 21221467 - 21221565
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||||||||||||||||||||||| |||| |||||||||||||| |||||||||||||||||||||||| |||| |||||||||||| |||||||||||    
T  21221467 actcaatgccataaaaaatttgtcttgtgctgttctgccttatgttgtactgttctatcttgtactgttctgtctagtacttgctgtattgcaaaccaa 21221565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 28675768 - 28675670
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||||||||||||||||||||||| |||||||||||||||| || |||||||||||||||||||||||| ||||||||||||  |||||||||||||||    
T  28675768 actcaatgccataaaaaatttgtcctgtgttgttctgccttgtgttgtactgttctatcttgtactgttctgtccagtacttattgttttgcaaaccaa 28675670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 3 - 99
Target Start/End: Original strand, 26282496 - 26282592
Alignment:
Q  3 tcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||||||||||||||||||||||||| ||||||| ||| || |||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  26282496 tcaatgccataaaaaatttgtcatgtgctgttctgtcttgtgttgtactgttctatcttgtactgttctatccagtacttgctgttttgcaaaccaa 26282592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 1344814 - 1344912
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||||||||||||||||| |||||||||| ||||||| ||| || |||||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  1344814 actcaatgccataaaaaaattgtcatgtgatgttctgtcttgtgttgtactgttctatcttgtactgttttgtccagtacttgctattttgcaaaccaa 1344912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 2135048 - 2134950
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||||||||||||||||||||||| |||||||||||||||| || |||||||||||||||||||  ||| |||| ||||||||||||||||||||||||    
T  2135048 actcaatgccataaaaaatttgtcttgtgttgttctgccttgtgttgtactgttctatcttgtaacgttctgtctagtacttgctgttttgcaaaccaa 2134950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 29584853 - 29584755
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||||||| |||||||||||||  |||  |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  29584853 actcaatgcaataaaaaatttgttctgtactgttctgccttatgttgtactgttctatcttgtactgttctgtccagtacttgctgttttgcaaaccaa 29584755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 51259887 - 51259985
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||||||||||||||| |||||| |||| ||||||||||| || |||||||||||||||||||||||| | |||||||||| ||||||||||||||||    
T  51259887 actcaatgccataaaaattttgtcttgtgctgttctgccttgtgttgtactgttctatcttgtactgttctatccagtacttactgttttgcaaaccaa 51259985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 53046748 - 53046846
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||||||||||||||||||||||  |||||||||||||||| || ||||||||||||||||||| |||| ||| ||||||||| |||||||||||||||    
T  53046748 actcaatgccataaaaaatttgttctgtgttgttctgccttgtgttgtactgttctatcttgtattgttctgttcagtacttgttgttttgcaaaccaa 53046846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 3864781 - 3864879
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||||||||||||||||||||||| |||| |||| ||| ||||| |||| ||||||||||||||||||| ||| |||||||| ||||||||||||||||    
T  3864781 actcaatgccataaaaaatttgtcctgtgctgttatgcgttatgttgtaatgttctatcttgtactgttctgtgcagtacttactgttttgcaaaccaa 3864879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 53557902 - 53558000
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||||||||||||||||||||||||||| ||||||||||| || ||||||||| || |||||| |||| |||| ||||||| ||||||||||||||||    
T  53557902 actcaatgccataaaaaatttgtcatgtgctgttctgccttgtgttgtactgttataccttgtattgttctgtcaagtacttactgttttgcaaaccaa 53558000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 3 - 99
Target Start/End: Complemental strand, 5442267 - 5442171
Alignment:
Q  3 tcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||||||||||||||||||||||||||||||| | |||| |  ||||||||||||  |||||||||| ||||||||||||||| |||||||||||||    
T  5442267 tcaatgccataaaaaatttgtcatgtgttgttataccttgtattgtactgttctaaattgtactgttctgtccagtacttgctattttgcaaaccaa 5442171  T

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Target: chr3; HSP #15
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 25860528 - 25860626
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||| |||||||||||||||||| ||||||||| |||||| || ||| |||||||||||||||||||| |||||||| ||| | ||||||||||||||    
T  25860528 actcattgccataaaaaatttgtcctgtgttgttatgccttttgttgtgctgttctatcttgtactgttctgtccagtgcttaccgttttgcaaaccaa 25860626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 43175547 - 43175449
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||||| ||||||||||||| || |||| ||||||| ||| |  | |||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  43175547 actcaataccataaaaaatttatcgtgtgctgttctgtcttgtattatactgttctatcttgtactgttttgtccagtacttgctgttttgcaaaccaa 43175449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 24571259 - 24571162
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||||||||||||||||||||||||||  |||||||||||||| |||| ||||||||||| || || | |||||||||||| ||||||| ||||||||    
T  24571259 actcaatgccataaaaaatttgtcatgtactgttctgccttatgttgtattgttctatcttatagtg-tctgtccagtacttactgttttacaaaccaa 24571162  T

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Target: chr3; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 47958539 - 47958637
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||||||| ||||||||||||||  | || ||||||||||| |  |||| |||||||||||||| |||| |||||||||||||||||||||||||||||    
T  47958539 actcaatgacataaaaaatttgttctatgctgttctgccttgtattgtagtgttctatcttgtattgttctgtccagtacttgctgttttgcaaaccaa 47958637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 40094481 - 40094413
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgtt 69  Q
    ||||||||||||||||| ||||||||||||||||||||||| || |||| |||||||||||||||||||    
T  40094481 actcaatgccataaaaattttgtcatgtgttgttctgccttgtgttgtattgttctatcttgtactgtt 40094413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 99
Target Start/End: Original strand, 51925317 - 51925412
Alignment:
Q  3 tcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||||||||||||| |||||||||||| ||||||||||| || ||| ||||| | |||||||||||||| |||||||||| | ||||||||||||||    
T  51925317 tcaatgccataaaa-atttgtcatgtgctgttctgccttgtgttgtgctgttatgtcttgtactgttatatccagtacttaccgttttgcaaaccaa 51925412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 25927434 - 25927533
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctg-ttttgcaaaccaa 99  Q
    |||||||||||||||||||||||| |||| |||||| |||| |  |||||||||||||||| ||||||| ||||| ||||||| || |||||||||||||    
T  25927434 actcaatgccataaaaaatttgtcttgtgctgttctaccttgtattgtactgttctatcttatactgttttgtccggtacttgttgtttttgcaaaccaa 25927533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 14 - 99
Target Start/End: Original strand, 22484862 - 22484947
Alignment:
Q  14 aaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||||||||| |||| |||||| ||||||| |||  ||| ||||||| |||||||||||||||||||| ||||||||||||||||    
T  22484862 aaaaatttgtcttgtgctgttctaccttatgttgtgttgtcctatcttatactgttatgtccagtacttactgttttgcaaaccaa 22484947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 39052945 - 39053044
Alignment:
Q  1 actcaatgccataaaa-aatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||||||| |||||| ||||||||||||||||||||  ||| || |||||||||||||||||||||||| ||| ||| | || || |||||||||||||    
T  39052945 actcaatgctataaaaaaatttgtcatgtgttgttctatcttgtgttgtactgttctatcttgtactgttctgttcagcatttactattttgcaaaccaa 39053044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 38213332 - 38213234
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||| ||||||||||||||||||||||| |||||||||| ||| | |  |||| | |||||||||||| ||| || ||||| ||||||||||||||||    
T  38213332 actcattgccataaaaaatttgtcatgtgctgttctgcctaatgttatgttgttttgtcttgtactgttctgtacaatacttactgttttgcaaaccaa 38213234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 14 - 99
Target Start/End: Original strand, 31883141 - 31883226
Alignment:
Q  14 aaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||||||||| ||||||||||| |||| |  ||| ||||||| |||||||||||| ||| | ||||||||| |||||||||||||    
T  31883141 aaaaatttgtcctgtgttgttctcccttgtattgtgctgttctttcttgtactgttctgtactgtacttgctattttgcaaaccaa 31883226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 60 - 99
Target Start/End: Complemental strand, 20254994 - 20254955
Alignment:
Q  60 ttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  20254994 ttgtactgttatgtccagtacttgctgttttgcaaaccaa 20254955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 44116917 - 44116859
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatc 59  Q
    |||||||||||||||||||||||| |||| ||||||| ||| || ||||||||||||||    
T  44116917 actcaatgccataaaaaatttgtcctgtgctgttctgacttgtgttgtactgttctatc 44116859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 99
Target Start/End: Original strand, 50386575 - 50386660
Alignment:
Q  14 aaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||||||||| |||| |||||| |||| |  ||| ||||||| | |||||||||| ||| | |||||||||||||||||||||||    
T  50386575 aaaaatttgtcctgtgctgttctcccttgtattgtgctgttcttttttgtactgttctgtactgtacttgctgttttgcaaaccaa 50386660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 20609755 - 20609810
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttct 56  Q
    |||||||| ||||||||||||||| |||| ||||||||||| || |||||||||||    
T  20609755 actcaatgtcataaaaaatttgtcctgtgctgttctgccttgtgttgtactgttct 20609810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 34026645 - 34026590
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttct 56  Q
    ||||||| |||||||||||||||| |||| ||||||||||| || |||||||||||    
T  34026645 actcaataccataaaaaatttgtcctgtgctgttctgccttgtgttgtactgttct 34026590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 14 - 99
Target Start/End: Complemental strand, 10747183 - 10747098
Alignment:
Q  14 aaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||||||||| |||| |||||| |||| |  |||  |||||| |||||||||||| | | | |||||||||||||||||||||||    
T  10747183 aaaaatttgtcttgtgctgttctcccttgtattgtgttgttctttcttgtactgttttatactgtacttgctgttttgcaaaccaa 10747098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 14 - 99
Target Start/End: Original strand, 33364897 - 33364982
Alignment:
Q  14 aaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||||||||| || ||||||||  ||| |  ||| || |||| |||||||||||| ||| | |||||||||||||||||||||||    
T  33364897 aaaaatttgtcctgggttgttctctcttgtattgtgctattctttcttgtactgttttgtactgtacttgctgttttgcaaaccaa 33364982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 66
Target Start/End: Original strand, 42636514 - 42636575
Alignment:
Q  5 aatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtact 66  Q
    |||||||||||||||||||| |||| ||||||||||| || |||||| |||| ||| |||||    
T  42636514 aatgccataaaaaatttgtcctgtgctgttctgccttgtgttgtactattctgtctagtact 42636575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 14 - 99
Target Start/End: Original strand, 54964001 - 54964086
Alignment:
Q  14 aaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||||||||  ||||||| ||||| ||||| | |  ||| ||||||| |||||||||||||||||| | || |||||||||||||    
T  54964001 aaaaatttgttttgtgttgctctgctttatgttatggtgtcctatcttatactgttatgtccagtacgtactattttgcaaaccaa 54964086  T

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Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 60 - 99
Target Start/End: Original strand, 3867809 - 3867848
Alignment:
Q  60 ttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||||||||||||| |||||||| ||||||||||||||||    
T  3867809 ttgtactgttatgttcagtacttactgttttgcaaaccaa 3867848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 60 - 99
Target Start/End: Original strand, 20609799 - 20609838
Alignment:
Q  60 ttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||||||||| |||||||||||| ||||||||||||||||    
T  20609799 ttgtactgttctgtccagtacttactgttttgcaaaccaa 20609838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 60 - 99
Target Start/End: Complemental strand, 34026601 - 34026562
Alignment:
Q  60 ttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||||||||| |||||||||||| ||||||||||||||||    
T  34026601 ttgtactgttctgtccagtacttactgttttgcaaaccaa 34026562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 60 - 99
Target Start/End: Complemental strand, 44116873 - 44116834
Alignment:
Q  60 ttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||||||||| | |||||||||||||||||||||||||||    
T  44116873 ttgtactgttctatccagtacttgctgttttgcaaaccaa 44116834  T

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Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 99
Target Start/End: Complemental strand, 29646039 - 29645946
Alignment:
Q  5 aatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||||||||||| |||||| |||| |||| | ||||||| |||  |||| | ||||||| |||| |||||| |||||| | |||||||||||||    
T  29646039 aatgccataaaaa-tttgtcttgtgatgttataccttatgttgtgttgttttgtcttgtattgttctgtccaatacttgttattttgcaaaccaa 29645946  T

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Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 45 - 99
Target Start/End: Original strand, 41695031 - 41695084
Alignment:
Q  45 ctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||| ||||||| |||||||||||| ||||  |||||||||||||||||||||||    
T  41695031 ctgtgctgttctttcttgtactgttttgtct-gtacttgctgttttgcaaaccaa 41695084  T

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Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 99
Target Start/End: Complemental strand, 21373869 - 21373820
Alignment:
Q  50 ctgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||||| ||||||| |||| |||||| ||||| ||||||||||||||||    
T  21373869 ctgttctgtcttgtattgttctgtccaatacttactgttttgcaaaccaa 21373820  T

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Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 91
Target Start/End: Original strand, 45691019 - 45691096
Alignment:
Q  14 aaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttg 91  Q
    |||||||||||||||||| ||||  |||||  |||  |||||| |||||||||||| | ||||||||||  |||||||    
T  45691019 aaaaatttgtcatgtgttattctatcttatattgtgttgttctgtcttgtactgttctatccagtacttagtgttttg 45691096  T

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Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 20255023 - 20254991
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgt 33  Q
    |||||||||||||||||||||||| ||||||||    
T  20255023 actcaatgccataaaaaatttgtcttgtgttgt 20254991  T

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Target: chr7 (Bit Score: 232; Significance: 1e-128; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 101 - 348
Target Start/End: Complemental strand, 27646772 - 27646525
Alignment:
Q  101 gaaagaatggcagacagagaacatgaagaatcatcatcacctttttacataaccaaataaagactcgaccagctaaaattccagcaacaacccagcttcc 200  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||    
T  27646772 gaaagaatggcagacagagaacatgaagattcatcatcacctttttacataaccaaataaagactccaccagctaaaattccagtaacaacccagcttcc 27646673  T
Q  201 agaaccatactcctgcccttcctgtatcaaattaaaacttgcagccaacataacacctgcagccattccgttacacaacccagcccattgcggatcaagc 300  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27646672 agaaccatactcctgcccttcctgtatcaaatcaaaacttgcagccaacataacacctgcagccattccgttacacaacccagcccattgcggatcaagc 27646573  T
Q  301 tctacaaagaagaacggcactgcacctaaaccagtagcagctgccatc 348  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  27646572 tctacaaagaagaacggcactgcacctaaaccagtagcagctgccatc 27646525  T

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Target: chr7; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 32873883 - 32873981
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  32873883 actcaatgccataaaaaatttgtcatgtgttgttctgccttgtgttgtactgttctatcttgtactgttctgtccagtacttgctgttttgcaaaccaa 32873981  T

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Target: chr7; HSP #3
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 18470665 - 18470567
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||||||||||||||||||||||||||| ||||||||||| || |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  18470665 actcaatgccataaaaaatttgtcatgtgctgttctgccttgtgttgtactgttctatcttgtactgttctgtccagtacttgctgttttgcaaaccaa 18470567  T

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Target: chr7; HSP #4
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 36769683 - 36769781
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||||||||||||||||||||||||||| ||||||||||| || |||||||||||||||||||||||| |||||||||||| ||||||||||||||||    
T  36769683 actcaatgccataaaaaatttgtcatgtgctgttctgccttgtgttgtactgttctatcttgtactgttctgtccagtacttactgttttgcaaaccaa 36769781  T

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Target: chr7; HSP #5
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 46633678 - 46633580
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||||||||||||||||||||||| |||||||||||||||| || ||||||||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  46633678 actcaatgccataaaaaatttgtcttgtgttgttctgccttgtgttgtactgttctatcttgtactattatgtccaatacttgctgttttgcaaaccaa 46633580  T

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Target: chr7; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 47947741 - 47947649
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgca 93  Q
    ||||||||||||||||||||||||||||| ||||||||||| || |||||||||||||||||||||||| |||||||||||||||||||||||    
T  47947741 actcaatgccataaaaaatttgtcatgtgctgttctgccttgtgttgtactgttctatcttgtactgttctgtccagtacttgctgttttgca 47947649  T

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Target: chr7; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 47953171 - 47953079
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgca 93  Q
    ||||||||||||||||||||||||||||| ||||||||||| || |||||||||||||||||||||||| |||||||||||||||||||||||    
T  47953171 actcaatgccataaaaaatttgtcatgtgctgttctgccttgtgttgtactgttctatcttgtactgttctgtccagtacttgctgttttgca 47953079  T

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Target: chr7; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 3922817 - 3922915
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||||||||||||||||||||||| |||| ||||||||||| || ||||||| |||||||||||||||| |||||||||||||||||||||||||||||    
T  3922817 actcaatgccataaaaaatttgtcctgtgctgttctgccttgtgttgtactggtctatcttgtactgttctgtccagtacttgctgttttgcaaaccaa 3922915  T

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Target: chr7; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 41211315 - 41211413
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||||||||||||||||||||||| | |||||||||||||| || |||| ||||||||||||||||||| |||||||||||||||||||||||||||||    
T  41211315 actcaatgccataaaaaatttgtcctatgttgttctgccttgtgttgtattgttctatcttgtactgttttgtccagtacttgctgttttgcaaaccaa 41211413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 3892140 - 3892238
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||||||||||||||||||||||||| || ||||||||||| || |||||||||||||||| ||||||| |||||||||||| ||||||||||||||||    
T  3892140 actcaatgccataaaaaatttgtcatatgctgttctgccttgtgttgtactgttctatcttatactgttctgtccagtacttactgttttgcaaaccaa 3892238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 12982284 - 12982186
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||||||||||||||| ||||||||||| ||||||||||| || |||||||||||||||||||||||| | ||||||||||||| |||||||||||||    
T  12982284 actcaatgccataaaaattttgtcatgtgctgttctgccttgtgttgtactgttctatcttgtactgttctctccagtacttgctcttttgcaaaccaa 12982186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 21784852 - 21784754
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||||||||||||||| ||||||  |||||||||||||||| || |||||||||||||||||||||||| |||||||||||| ||||||||||||||||    
T  21784852 actcaatgccataaaagatttgttctgtgttgttctgccttgtgttgtactgttctatcttgtactgttttgtccagtacttactgttttgcaaaccaa 21784754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 26994339 - 26994437
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||||||||||||||||||||||| |||| ||||||||||| || |||||||||||||||||| ||||| |||||||||||| ||||||||||||||||    
T  26994339 actcaatgccataaaaaatttgtcctgtgctgttctgccttgtgttgtactgttctatcttgtcctgttctgtccagtactttctgttttgcaaaccaa 26994437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 30599122 - 30599220
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||||||  |||||||||||||||||||||||||||||||| || |||||||||||||||||||||||| |||||||||||| |||||||| |||||||    
T  30599122 actcaatttcataaaaaatttgtcatgtgttgttctgccttgtgttgtactgttctatcttgtactgttctgtccagtacttactgttttgtaaaccaa 30599220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 3 - 95
Target Start/End: Original strand, 26371925 - 26372017
Alignment:
Q  3 tcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaa 95  Q
    ||||||||||||||||||||||||||| |||||||  ||||| ||||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  26371925 tcaatgccataaaaaatttgtcatgtgatgttctgttttatgttgtactgttctatcttgtactgttatgtccagtacttactgtttttcaaa 26372017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 1870115 - 1870017
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||||||| |||||||||||| ||||||| ||||||||||| || ||||||||||||| |||||||||||||| |||||| ||||||||||||||||||    
T  1870115 actcaatgtcataaaaaatttatcatgtgctgttctgccttgtgttgtactgttctatattgtactgttatgtacagtacatgctgttttgcaaaccaa 1870017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 10932671 - 10932769
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||||||||||||||||||||||| | || ||||||||| | || |||||||||||||||||||||||| |||||||||||| ||||||||||||||||    
T  10932671 actcaatgccataaaaaatttgtcctatgctgttctgccgtgtgttgtactgttctatcttgtactgttctgtccagtacttactgttttgcaaaccaa 10932769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 11321999 - 11322097
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||||||||||||||||||||||||||  ||||||||||| || |||||||||||||||||||||||| |||||  ||||| ||||||||||||||||    
T  11321999 actcaatgccataaaaaatttgtcatgtactgttctgccttgtgttgtactgttctatcttgtactgttctgtccgatacttactgttttgcaaaccaa 11322097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 18386506 - 18386408
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||||||| |||||||||||||||||||||||||||||||| || |||| |||||||| |||||| ||| |||||| ||||||||||||||||||||||    
T  18386506 actcaatgtcataaaaaatttgtcatgtgttgttctgccttgtgttgtattgttctattttgtaccgttttgtccaatacttgctgttttgcaaaccaa 18386408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 30849360 - 30849458
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||||||||||||||||| ||||| |||||||||||| ||| || |||||||||||||||||||||||| |||| ||||||| ||||||||||||||||    
T  30849360 actcaatgccataaaaaaattgtcctgtgttgttctgtcttgtgttgtactgttctatcttgtactgttctgtcaagtacttactgttttgcaaaccaa 30849458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 43189357 - 43189455
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||||||||||||||||||||||||||   | ||||||||| || |||||||||||||||| |||||||||||||||||||| ||||||||||||||||    
T  43189357 actcaatgccataaaaaatttgtcatgcactattctgccttgtgttgtactgttctatcttatactgttatgtccagtacttactgttttgcaaaccaa 43189455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 43158800 - 43158898
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||||||||||||||||||||||| |||  ||||||| ||| || |||||||||||||||||||||| | | || ||||||||||||||||||||||||    
T  43158800 actcaatgccataaaaaatttgtcctgtactgttctgtcttgtgttgtactgttctatcttgtactgctctatctagtacttgctgttttgcaaaccaa 43158898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 14 - 99
Target Start/End: Original strand, 23349417 - 23349502
Alignment:
Q  14 aaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||||||||||||||| |||||| ||||||| |||  |||||||||||||||||||||||||| ||||| || |||||||||||||    
T  23349417 aaaaatttgtcatgtgctgttctaccttatgttgttttgttctatcttgtactgttatgtccattacttactattttgcaaaccaa 23349502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 25 - 99
Target Start/End: Complemental strand, 46408853 - 46408779
Alignment:
Q  25 atgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||| ||||||||||| || |||||||||||||||||||||||| | |||| ||||||||||||||||||||||    
T  46408853 atgtgatgttctgccttgtgttgtactgttctatcttgtactgttctatccaatacttgctgttttgcaaaccaa 46408779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 98
Target Start/End: Complemental strand, 11822210 - 11822116
Alignment:
Q  3 tcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaacca 98  Q
    ||||||||||||||| |||||| | |||||||||||||| || |||  |||||||| || ||||||||||| |||||||| |||||||||||||||    
T  11822210 tcaatgccataaaaa-tttgtcctatgttgttctgccttgtgttgtgttgttctattttatactgttatgttcagtacttactgttttgcaaacca 11822116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 22724657 - 22724739
Alignment:
Q  14 aaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaac 96  Q
    |||||||| || ||||||||||||||||||| |||  | ||||||||||||||||| |||||||||||| || ||||||||||    
T  22724657 aaaaatttatcttgtgttgttctgccttatgttgtgatattctatcttgtactgttctgtccagtacttactattttgcaaac 22724739  T

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Target: chr7; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 3 - 84
Target Start/End: Complemental strand, 1363616 - 1363536
Alignment:
Q  3 tcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgc 84  Q
    ||||||||||||||| |||||||||||||||||| |||| || |||  ||||||||||| || |||||||||||||||||||    
T  1363616 tcaatgccataaaaa-tttgtcatgtgttgttctaccttctgatgtgttgttctatcttatattgttatgtccagtacttgc 1363536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 14 - 99
Target Start/End: Complemental strand, 43368170 - 43368085
Alignment:
Q  14 aaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||||||||||||||| |||||| |||| |  ||| ||||||| |||||||||||| ||| | |||||||||||||||||||||||    
T  43368170 aaaaatttgtcatgtgctgttctcccttgtattgtgctgttctttcttgtactgttctgtactgtacttgctgttttgcaaaccaa 43368085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 21133352 - 21133254
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||||||| ||||||||||||||  |||||||||||||||| || |||  |||||| ||||||| ||||||||  ||||||| || |||||| ||||||    
T  21133352 actcaatgtcataaaaaatttgtactgtgttgttctgccttgtgttgtgatgttctttcttgtattgttatgtatagtacttactattttgccaaccaa 21133254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 14 - 99
Target Start/End: Complemental strand, 329439 - 329354
Alignment:
Q  14 aaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||||||||||||||  |||| |||||| || ||| |||||||   |||||||||| |||||||||||| ||||||||||||||||    
T  329439 aaaaatttgtcatgtactgttatgccttgtgttgtgctgttctgcattgtactgttctgtccagtacttactgttttgcaaaccaa 329354  T

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Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 14 - 99
Target Start/End: Complemental strand, 9913494 - 9913409
Alignment:
Q  14 aaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||||||||||||||| |||||| |||| |  |||  |||||| |||||||||||| ||| ||||| |||||||||||||||||||    
T  9913494 aaaaatttgtcatgtggtgttctcccttgtattgtgttgttctttcttgtactgttctgtacagtatttgctgttttgcaaaccaa 9913409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 14 - 99
Target Start/End: Complemental strand, 9927182 - 9927097
Alignment:
Q  14 aaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||||||||||||||| |||||| |||| |  |||  |||||| |||||||||||| ||| ||||| |||||||||||||||||||    
T  9927182 aaaaatttgtcatgtggtgttctcccttgtattgtgttgttctttcttgtactgttctgtacagtatttgctgttttgcaaaccaa 9927097  T

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Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 46 - 99
Target Start/End: Original strand, 47316842 - 47316895
Alignment:
Q  46 tgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||||||||||||||||||| ||| |||||||||||| ||||||||||||||||    
T  47316842 tgtactgttctatcttgtaccgttctgtccagtacttactgttttgcaaaccaa 47316895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 51 - 99
Target Start/End: Complemental strand, 34117404 - 34117356
Alignment:
Q  51 tgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  34117404 tgttctgtcttgtactgttatgtccagtacttactgttttgcaaaccaa 34117356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 40753136 - 40753081
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttct 56  Q
    |||||||||||||||||||||||| ||||||||||||| || || |||||||||||    
T  40753136 actcaatgccataaaaaatttgtcctgtgttgttctgctttgtgttgtactgttct 40753081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 16963088 - 16962995
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||||||||||||||||||||||||||| |||| |||     ||||| |||   | | |||||||||| |||||||||||| ||||||||||||||||    
T  16963088 actcaatgccataaaaaatttgtcatgtgctgttatgc-----gctgttctgccttgtgttgtactgttctgtccagtacttactgttttgcaaaccaa 16962995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 14 - 100
Target Start/End: Complemental strand, 48445490 - 48445404
Alignment:
Q  14 aaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaat 100  Q
    ||||||||||||||||||||| |||||| || |||  |||| |   |||||||||| |||||||||||| |||| ||||||||||||    
T  48445490 aaaaatttgtcatgtgttgttatgccttgtgttgtgttgttatgcattgtactgttttgtccagtacttactgtcttgcaaaccaat 48445404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 99
Target Start/End: Original strand, 34295530 - 34295615
Alignment:
Q  14 aaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||||||||| |||| |||||| |||| |  |||  |||||| |||||||||||| ||| | |||||||||||||||||||||||    
T  34295530 aaaaatttgtcttgtgctgttctcccttgtattgtgttgttctttcttgtactgttttgtactgtacttgctgttttgcaaaccaa 34295615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 29661304 - 29661249
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttct 56  Q
    ||||||||| |||||||||||||| |||||||||||||||| || |||||| ||||    
T  29661304 actcaatgctataaaaaatttgtcttgtgttgttctgccttgtgttgtactattct 29661249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 14 - 99
Target Start/End: Original strand, 22724158 - 22724243
Alignment:
Q  14 aaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||||||| || ||||||||||||||||||| |||  ||| ||||||| |||| || ||||| ||| || || |||||||||||||    
T  22724158 aaaaatttatcttgtgttgttctgccttatgttgtgttgtcctatcttatactattttgtccggtatttactattttgcaaaccaa 22724243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 14 - 99
Target Start/End: Original strand, 41665701 - 41665786
Alignment:
Q  14 aaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||||||||| |||| | || ||| ||||| ||| |||| |||||||||| |||||||| | |||||| |||||||| |||||||    
T  41665701 aaaaatttgtcttgtgctattatgcgttatgttgtgctgtcctatcttgtattgttatgttccgtacttactgttttgtaaaccaa 41665786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 47442818 - 47442765
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgtt 54  Q
    |||||||| ||||||||||||||| |||  |||||||||||||| |||||||||    
T  47442818 actcaatgtcataaaaaatttgtcctgtagtgttctgccttatgttgtactgtt 47442765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 99
Target Start/End: Complemental strand, 48894696 - 48894601
Alignment:
Q  3 tcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||||| |||||||||| |||  ||| |||| | |||| || ||||||||||  ||||||||||||||||| | || || ||||||||||||||||    
T  48894696 tcaatgcaataaaaaatt-gtccagtgctgttttaccttgtgttgtactgttcggtcttgtactgttatgtcaaatatttactgttttgcaaaccaa 48894601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 60 - 99
Target Start/End: Complemental strand, 40753092 - 40753053
Alignment:
Q  60 ttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||||||||| |||||||||||| ||||||||||||||||    
T  40753092 ttgtactgttctgtccagtacttactgttttgcaaaccaa 40753053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 60 - 99
Target Start/End: Complemental strand, 47442774 - 47442735
Alignment:
Q  60 ttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||||||||| |||||| ||||||||||||||||||||||    
T  47442774 ttgtactgttttgtccaatacttgctgttttgcaaaccaa 47442735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 99
Target Start/End: Original strand, 26910585 - 26910618
Alignment:
Q  66 tgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||||||||||||||| ||||||||||||||||    
T  26910585 tgttatgtccagtacttactgttttgcaaaccaa 26910618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 99
Target Start/End: Complemental strand, 38301305 - 38301232
Alignment:
Q  26 tgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||||||||| |||| |  |||  |||||| |||||||||||| ||| | ||||||| |||||||||||||||    
T  38301305 tgtgttgttctcccttgtattgtgttgttctttcttgtactgttctgtactgtacttgttgttttgcaaaccaa 38301232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 99
Target Start/End: Original strand, 46448799 - 46448840
Alignment:
Q  58 tcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||||||||||||||| ||||||| || |||||||||||||    
T  46448799 tcttgtactgttatgtcaagtacttactattttgcaaaccaa 46448840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 11250603 - 11250563
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgcctt 41  Q
    ||||||| |||||||||||||||| |||| |||||||||||    
T  11250603 actcaataccataaaaaatttgtcctgtgctgttctgcctt 11250563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 87; Significance: 1e-41; HSPs: 59)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 52319306 - 52319208
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||||||||||||||||||||||| |||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52319306 actcaatgccataaaaaatttgtcctgtgttgttctgccttgtgttgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 52319208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 20802637 - 20802735
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||||||||||||||||||||||| |||||||||||||||| || |||||||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  20802637 actcaatgccataaaaaatttgtcctgtgttgttctgccttgtgttgtactgttctatcttgtactgttctgttcagtacttgctgttttgcaaaccaa 20802735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 23521860 - 23521762
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||||||||||||||||||||||||||| ||||||||||| || ||||||||| |||||||||||||| |||||||||||||||||||||||||||||    
T  23521860 actcaatgccataaaaaatttgtcatgtgctgttctgccttgtgttgtactgttttatcttgtactgttctgtccagtacttgctgttttgcaaaccaa 23521762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 3 - 99
Target Start/End: Complemental strand, 37865731 - 37865635
Alignment:
Q  3 tcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||||||||||||||| |||||||||||||||||||||| || |||||||||||||||||||||||||||||| |||||| ||||||||||||||||    
T  37865731 tcaatgccataaaaaaattgtcatgtgttgttctgccttgtgttgtactgttctatcttgtactgttatgtcccgtacttactgttttgcaaaccaa 37865635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 12600866 - 12600768
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||||||||||||||||||||||| ||| ||||||| ||| || |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  12600866 actcaatgccataaaaaatttgtcaagtgctgttctgacttgtgttgtactgttctatcttgtactgttctgtccagtacttgctgttttgcaaaccaa 12600768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 24002318 - 24002220
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||||||||| |||||||||||| |||| ||||||||||| || |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  24002318 actcaatgccaaaaaaaatttgtcctgtgctgttctgccttgtgttgtactgttctatcttgtactgttctgtccagtacttgctgttttgcaaaccaa 24002220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 49152205 - 49152303
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||||||||||||||||||||||| |||| ||||||||||| || |||||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  49152205 actcaatgccataaaaaatttgtcctgtgctgttctgccttgtgttgtactgttctatcttatactgttctgtccagtacttgctgttttgcaaaccaa 49152303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 21580006 - 21579908
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||||| |||||||||||||||| |||||||||||||||| || |||||||||||||||| ||||||| |||||||||||| ||||||||||||||||    
T  21580006 actcaataccataaaaaatttgtcctgtgttgttctgccttgtgttgtactgttctatcttatactgttctgtccagtacttactgttttgcaaaccaa 21579908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 43641079 - 43640981
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||||||||||||||| |||||| |||| ||||||||||| || |||||||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  43641079 actcaatgccataaaaattttgtcctgtgctgttctgccttgtgttgtactgttctatcttgtactgttctgtctagtacttgctgttttgcaaaccaa 43640981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 56154601 - 56154503
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||||||||||||||||||||||||||  ||||||||||| || |||||||||||||||| ||||||| ||||||||||||| |||||||||||||||    
T  56154601 actcaatgccataaaaaatttgtcatgtactgttctgccttgtgttgtactgttctatcttatactgttctgtccagtacttgttgttttgcaaaccaa 56154503  T

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Target: chr4; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 55065439 - 55065536
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||||||||||||||| ||||||| |||| ||||||||||| || |||||| || |||||| |||||||||||||||||||||||||||||||||||||    
T  55065439 actcaatgccataaaa-atttgtcctgtgctgttctgccttgtgttgtactattttatcttatactgttatgtccagtacttgctgttttgcaaaccaa 55065536  T

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Target: chr4; HSP #12
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 3 - 95
Target Start/End: Original strand, 29785645 - 29785737
Alignment:
Q  3 tcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaa 95  Q
    ||||||||||||||||||||||||||| ||||||||||| || |||||||||||||||| ||||||| ||| ||||||||  |||||||||||    
T  29785645 tcaatgccataaaaaatttgtcatgtgctgttctgccttgtgttgtactgttctatcttatactgttctgttcagtacttattgttttgcaaa 29785737  T

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Target: chr4; HSP #13
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 9512446 - 9512544
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||||||||||||||||||||||||||| | ||||| ||| || || ||| ||||||||||||||||| ||||  |||||||||||||||||||||||    
T  9512446 actcaatgccataaaaaatttgtcatgtgctattctgtcttttgttgcactattctatcttgtactgttctgtcacgtacttgctgttttgcaaaccaa 9512544  T

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Target: chr4; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 6776558 - 6776482
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccag 77  Q
    |||||||||||||||||||||||| |||| ||||||||||| || |||||||||||||||||||||||| |||||||    
T  6776558 actcaatgccataaaaaatttgtcctgtgctgttctgccttgtgttgtactgttctatcttgtactgttctgtccag 6776482  T

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Target: chr4; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 14296577 - 14296483
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaa 95  Q
    |||||||||||||||||||||||| |||| |||||||| || || ||||||||||||| |||| ||||| ||||||||||||  |||||||||||    
T  14296577 actcaatgccataaaaaatttgtcctgtgctgttctgctttgtgttgtactgttctatattgttctgttctgtccagtacttattgttttgcaaa 14296483  T

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Target: chr4; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 21202720 - 21202622
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||| ||||||||||||||||||||||| |||||||  || || ||| ||||||| |||||||||||| |||||||||||| || |||||||||||||    
T  21202720 actcattgccataaaaaatttgtcatgtgctgttctgttttgtgttgtgctgttctgtcttgtactgttttgtccagtacttactattttgcaaaccaa 21202622  T

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Target: chr4; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 33177138 - 33177236
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||||||||||||||| ||||||| | |||||||||| ||| || |||||||||||||||| ||||||| |||| ||||||| | ||||||||||||||    
T  33177138 actcaatgccataaaatatttgtcctttgttgttctgtcttgtgttgtactgttctatcttatactgttctgtcaagtacttaccgttttgcaaaccaa 33177236  T

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Target: chr4; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 14314825 - 14314731
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaa 95  Q
    |||||||||||||||||||||||| |||| |||||||| || || ||||||||||||| |||| ||||| ||||||||||||  ||||| |||||    
T  14314825 actcaatgccataaaaaatttgtcctgtgctgttctgctttgtgttgtactgttctatattgttctgttctgtccagtacttattgtttagcaaa 14314731  T

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Target: chr4; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 36743794 - 36743892
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||||||||||||||||||||||| |||| |||||||||||||| |||| | ||||||||||||| ||| | || ||||||| || |||| ||||||||    
T  36743794 actcaatgccataaaaaatttgtcttgtgctgttctgccttatgttgtattattctatcttgtaccgttctatctagtacttactatttttcaaaccaa 36743892  T

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Target: chr4; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 38 - 99
Target Start/End: Complemental strand, 42869925 - 42869864
Alignment:
Q  38 ccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  42869925 ccttatgttgtactgttctatcttgtactgttctgtcgagtacttgctgttttgcaaaccaa 42869864  T

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Target: chr4; HSP #21
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 3 - 99
Target Start/End: Complemental strand, 9807134 - 9807039
Alignment:
Q  3 tcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||||||||| ||| |||||| |||| |||| |||||| || ||| |||||||||||||||||||| |||||||||||| || |||||||||||||    
T  9807134 tcaatgccatacaaa-tttgtcctgtgctgttatgccttgtgttgtgctgttctatcttgtactgttctgtccagtacttactattttgcaaaccaa 9807039  T

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Target: chr4; HSP #22
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 20518128 - 20518196
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgtt 69  Q
    |||||||||||||||||||||||| |||| ||||||||||| || |||||| |||||||||||||||||    
T  20518128 actcaatgccataaaaaatttgtcctgtgctgttctgccttgtgttgtactattctatcttgtactgtt 20518196  T

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Target: chr4; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 55593865 - 55593764
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttat---gtccagtacttgctgttttgcaaacc 97  Q
    |||||||||||||||||||||||  ||  |||||||||||| || |||||||||||||||||||||||| |   ||||||||||| ||| ||| ||||||    
T  55593865 actcaatgccataaaaaatttgttttgcattgttctgccttgtgttgtactgttctatcttgtactgttctgtcgtccagtacttactgatttacaaacc 55593766  T
Q  98 aa 99  Q
    ||    
T  55593765 aa 55593764  T

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Target: chr4; HSP #24
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 5 - 99
Target Start/End: Complemental strand, 34929891 - 34929797
Alignment:
Q  5 aatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||||||||||| ||||||||||| ||||||||||| || |||||| || ||| |||||||||| |||| |||  || ||||||||||||||||    
T  34929891 aatgccataaaaattttgtcatgtgctgttctgccttgtgttgtactattttattttgtactgttttgtctagtttttactgttttgcaaaccaa 34929797  T

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Target: chr4; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 99
Target Start/End: Complemental strand, 2786942 - 2786847
Alignment:
Q  3 tcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||||| |||||||||| |||  ||| |||| ||||||||| |||  |||||  ||||||||||||||||||||||||| ||||||||||||||||    
T  2786942 tcaatgcaataaaaaatt-gtctagtgctgttttgccttatgttgtgttgttcggtcttgtactgttatgtccagtacttactgttttgcaaaccaa 2786847  T

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Target: chr4; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 44649281 - 44649361
Alignment:
Q  15 aaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaa 95  Q
    |||||||||||||||||||||| |||| |  ||||||||||| |||||||||||| ||| | |||||||| ||||||||||    
T  44649281 aaaatttgtcatgtgttgttctcccttgtattgtactgttctttcttgtactgttctgtactgtacttgccgttttgcaaa 44649361  T

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Target: chr4; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 29616150 - 29616095
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttct 56  Q
    ||||||||||||||||||||||||||||||||||||| ||| || |||||||||||    
T  29616150 actcaatgccataaaaaatttgtcatgtgttgttctgtcttgtgttgtactgttct 29616095  T

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Target: chr4; HSP #28
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 38486363 - 38486453
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaac 96  Q
    |||||| ||||||||||||||||| |||| ||||||||||     ||| ||||||||||||| |||||| |||| ||||||| |||||||||||||    
T  38486363 actcaacgccataaaaaatttgtcctgtgctgttctgcct-----tgtgctgttctatcttgcactgttctgtctagtacttactgttttgcaaac 38486453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 45 - 99
Target Start/End: Original strand, 46680640 - 46680694
Alignment:
Q  45 ctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||||||||||||||||||||||| |||||||||||| || |||||||||||||    
T  46680640 ctgtactgttctatcttgtactgttctgtccagtacttactattttgcaaaccaa 46680694  T

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Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 14 - 99
Target Start/End: Original strand, 22318502 - 22318587
Alignment:
Q  14 aaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||||||||||||||||||| || ||| || ||| |||||||   ||||||| || |||||||||||| ||||||||||||||||    
T  22318502 aaaaatttgtcatgtgttgttatgtcttgtgttgtgctgttctgcattgtactcttctgtccagtacttactgttttgcaaaccaa 22318587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 46 - 99
Target Start/End: Complemental strand, 36885881 - 36885828
Alignment:
Q  46 tgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||||||||||||||||||||||| |||| |||||| |||||||||||||||||    
T  36885881 tgtactgttctatcttgtactgttctgtctagtactcgctgttttgcaaaccaa 36885828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 53343585 - 53343638
Alignment:
Q  3 tcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttct 56  Q
    |||||||||||||||||||||||||||||||||||| || || |||||||||||    
T  53343585 tcaatgccataaaaaatttgtcatgtgttgttctgcattgtgttgtactgttct 53343638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 33552948 - 33553003
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttct 56  Q
    |||||||||||||||||||||||| ||||||||| |||||| || |||||||||||    
T  33552948 actcaatgccataaaaaatttgtcctgtgttgttttgccttgtgttgtactgttct 33553003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 60 - 99
Target Start/End: Complemental strand, 36497153 - 36497114
Alignment:
Q  60 ttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  36497153 ttgtactgttatgtccagtacttgctgttttgcaaaccaa 36497114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 20694351 - 20694258
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||| ||||||| ||||||||||||||| | ||||||||| || |||     |||||||||||||||| | |||| ||||| ||||||||||||||||    
T  20694351 actcattgccatacaaaatttgtcatgtgctattctgccttgtgttgt-----tctatcttgtactgttctatccattacttactgttttgcaaaccaa 20694258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 54542970 - 54542881
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttg 91  Q
    |||||||| ||||||||||||||| |||| |||||||| || || |||||||||||||| |||||| || |||  ||||||| ||||||||    
T  54542970 actcaatgacataaaaaatttgtcttgtgctgttctgctttgtgttgtactgttctatcctgtactattctgt-tagtacttactgttttg 54542881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 96
Target Start/End: Original strand, 37695649 - 37695741
Alignment:
Q  3 tcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaac 96  Q
    |||||||||||||| ||||||| |||| |||||| |||| |  |||  |||||| |||||||||||| ||| ||||||||| ||||||||||||    
T  37695649 tcaatgccataaaa-atttgtcttgtgctgttctcccttgtattgtgttgttctttcttgtactgttctgtacagtacttgttgttttgcaaac 37695741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 58 - 99
Target Start/End: Complemental strand, 37931844 - 37931803
Alignment:
Q  58 tcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||||||||||||||||||||||| ||||||||||||||||    
T  37931844 tcttgtactgttatgtccagtacttactgttttgcaaaccaa 37931803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 99
Target Start/End: Original strand, 50178611 - 50178696
Alignment:
Q  14 aaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||||||||| |||| |||||| |||| |  |||  |||||| |||||||||||| ||| | |||||||||||||||||||||||    
T  50178611 aaaaatttgtcctgtgatgttctcccttgtattgtgatgttctttcttgtactgttctgtactgtacttgctgttttgcaaaccaa 50178696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 99
Target Start/End: Complemental strand, 52949689 - 52949604
Alignment:
Q  14 aaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||||||||| |||| | |||| |||| |  ||| ||||||| |||||||||||| ||| | |||||||||||||||||||||||    
T  52949689 aaaaatttgtcctgtgctattctcccttgtattgtgctgttctttcttgtactgttctgtactgtacttgctgttttgcaaaccaa 52949604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 4325771 - 4325727
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgc 45  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||    
T  4325771 actcattgccataaaaaatttgtcgtgtgttgttctgccttatgc 4325727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 3 - 99
Target Start/End: Original strand, 7555065 - 7555160
Alignment:
Q  3 tcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||||||||||||| ||||||| |||| ||||||| ||| || |||  |||| | ||||||||||||| ||||| ||||| || |||||||||||||    
T  7555065 tcaatgccataaaa-atttgtcgtgtgatgttctgtcttgtgttgtgttgttttgtcttgtactgttaagtccaatacttactattttgcaaaccaa 7555160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 99
Target Start/End: Complemental strand, 13110305 - 13110211
Alignment:
Q  4 caatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||||||||||||| |||||  || |||||||| |||| |||| |  |||||||||||||| |||| | |||| ||||| ||||||||||||||||    
T  13110305 caatgccataaaaa-tttgttctgcgttgttctaccttgtgctatgttgttctatcttgtattgttttatccactacttactgttttgcaaaccaa 13110211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 60 - 99
Target Start/End: Original strand, 33552992 - 33553031
Alignment:
Q  60 ttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  33552992 ttgtactgttctgtccagtacttgctgttttgcaaaccaa 33553031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 47361515 - 47361570
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttct 56  Q
    |||||||  |||||||||||||||||||| ||||||||||| || |||||||||||    
T  47361515 actcaatatcataaaaaatttgtcatgtgctgttctgccttgtgttgtactgttct 47361570  T

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Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 45 - 99
Target Start/End: Complemental strand, 32181220 - 32181166
Alignment:
Q  45 ctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||| ||||||||||||||| |||| | |||||||||| ||||||||||||||||    
T  32181220 ctgtgctgttctatcttgtattgttctatccagtacttactgttttgcaaaccaa 32181166  T

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Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 95
Target Start/End: Complemental strand, 16320499 - 16320408
Alignment:
Q  3 tcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaa 95  Q
    ||||||||||||||| |||||| ||||||||||| |||| |  |||  |||||| ||||||| || | | | |||||||||||||||||||||    
T  16320499 tcaatgccataaaaa-tttgtcttgtgttgttctcccttctattgtgttgttctttcttgtattgctttatacagtacttgctgttttgcaaa 16320408  T

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Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 24210298 - 24210258
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgcctt 41  Q
    ||||||| |||||||| ||||||||||||||||||||||||    
T  24210298 actcaataccataaaatatttgtcatgtgttgttctgcctt 24210258  T

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Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 99
Target Start/End: Complemental strand, 29592873 - 29592783
Alignment:
Q  3 tcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||||||| |||||||||||| |||  ||||||||||     |||  |||||| |||||||||| ||||||||||| || ||||||||||||||||    
T  29592873 tcaatgcca-aaaaaatttgtcttgttctgttctgcct-----tgtgttgttctgtcttgtactgatatgtccagtatttactgttttgcaaaccaa 29592783  T

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Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 99
Target Start/End: Complemental strand, 38520498 - 38520446
Alignment:
Q  47 gtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||||||||||||| ||||||| |||||| |||| | |||||||||||||||    
T  38520498 gtactgttctatcttatactgttctgtccaatactagttgttttgcaaaccaa 38520446  T

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Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 51 - 99
Target Start/End: Complemental strand, 38812470 - 38812422
Alignment:
Q  51 tgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||||| || ||||||||| ||||| |||||||||||||||||||||||    
T  38812470 tgttctgtcgtgtactgttttgtccggtacttgctgttttgcaaaccaa 38812422  T

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Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 2725238 - 2725293
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttct 56  Q
    |||||||| ||||||||||||||| |||| ||||||||||| |||| || ||||||    
T  2725238 actcaatgtcataaaaaatttgtcctgtgctgttctgccttgtgctatattgttct 2725293  T

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Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 44324450 - 44324500
Alignment:
Q  3 tcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgtt 54  Q
    |||||||||||||| |||||||||||| |||||||||||||| ||| |||||    
T  44324450 tcaatgccataaaa-atttgtcatgtgctgttctgccttatgttgtgctgtt 44324500  T

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Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 99
Target Start/End: Original strand, 2725288 - 2725321
Alignment:
Q  66 tgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||| |||||||||||||||||||||||||||||    
T  2725288 tgttctgtccagtacttgctgttttgcaaaccaa 2725321  T

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Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 99
Target Start/End: Complemental strand, 3649604 - 3649519
Alignment:
Q  14 aaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||||||||| ||||| |||| |||||| || ||| |||||||   || ||||||  |||||||||||| || |||||||||||||    
T  3649604 aaaaatttgtgatgtgctgttatgccttgtgttgtgctgttctgcattatactgtgttgtccagtacttactattttgcaaaccaa 3649519  T

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Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 7001832 - 7001748
Alignment:
Q  3 tcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgtt 88  Q
    ||||||||||||||| |||||| ||| |||||||| ||| || |||  |||||| ||||||||| || ||||||||| || |||||    
T  7001832 tcaatgccataaaaa-tttgtcctgtattgttctgtcttgtgttgtgatgttctgtcttgtactattttgtccagtatttactgtt 7001748  T

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Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 99
Target Start/End: Complemental strand, 50186496 - 50186411
Alignment:
Q  14 aaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||||||||| | ||||||| || |||||| ||| || || | |||| |||||||  ||| ||||||| ||||||||||||||||    
T  50186496 aaaaatttgtcctatgttgttatgtcttatgttgtgctattttgtcttatactgttcagtcaagtacttactgttttgcaaaccaa 50186411  T

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Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 59
Target Start/End: Complemental strand, 32081124 - 32081080
Alignment:
Q  15 aaaatttgtcatgtgttgttctgccttatgctgtactgttctatc 59  Q
    |||||||||| |||| |||||| ||||||| ||||||||||||||    
T  32081124 aaaatttgtcttgtgctgttctaccttatgttgtactgttctatc 32081080  T

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Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 36885911 - 36885879
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgt 33  Q
    |||||||||||||||||||||||| ||||||||    
T  36885911 actcaatgccataaaaaatttgtcctgtgttgt 36885879  T

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Target: chr8 (Bit Score: 83; Significance: 3e-39; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 32020129 - 32020227
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||||||||||||||||||||||||||| ||||||||||| || |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  32020129 actcaatgccataaaaaatttgtcatgtgctgttctgccttgtgttgtactgttctatcttgtactgttctgtccagtacttgctgttttgcaaaccaa 32020227  T

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Target: chr8; HSP #2
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 3 - 99
Target Start/End: Complemental strand, 34063103 - 34063007
Alignment:
Q  3 tcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  34063103 tcaatgccataaaaaatttgtcatgtgttgtgctgccttatgttgtactgttctatcttgtactgttctgtccagtacttgcggttttgcaaaccaa 34063007  T

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Target: chr8; HSP #3
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 31513711 - 31513809
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||| |||||| ||||| ||||||||||||||||    
T  31513711 actcaatgccataaaaaatttgtcatgtgttgttctgccttgtgttgtactgttctatcttgtactgttttgtccaatacttactgttttgcaaaccaa 31513809  T

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Target: chr8; HSP #4
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 32303713 - 32303811
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||||||||||||||||||||||| |||| ||||||||||| || |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  32303713 actcaatgccataaaaaatttgtcctgtgctgttctgccttttgttgtactgttctatcttgtactgttctgtccagtacttgctgttttgcaaaccaa 32303811  T

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Target: chr8; HSP #5
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 45446432 - 45446334
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||||||||||||||||||||||||||| ||||||||||| || |||||||||||||||||||||||| |||||||||||| ||||||||||||||||    
T  45446432 actcaatgccataaaaaatttgtcatgtgctgttctgccttgtgttgtactgttctatcttgtactgttctgtccagtacttactgttttgcaaaccaa 45446334  T

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Target: chr8; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 29563354 - 29563452
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||||||||||||||||||||||||||||||||||| |||| || |||||||||||||||||||||||| ||| || ||||||||||||||||||||||    
T  29563354 actcaatgccataaaaaatttgtcatgtgttgttctaccttgtgttgtactgttctatcttgtactgttctgttcaatacttgctgttttgcaaaccaa 29563452  T

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Target: chr8; HSP #7
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 6386553 - 6386455
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||||||||||||||||||||||  |||| ||||||||||| || |||||||||||||||||||||||| ||||||||||||| |||||||||||||||    
T  6386553 actcaatgccataaaaaatttgttttgtgctgttctgccttgtgttgtactgttctatcttgtactgttctgtccagtacttgttgttttgcaaaccaa 6386455  T

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Target: chr8; HSP #8
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 8673183 - 8673281
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||||||||||||||| |||||| |||| |||| |||||| || |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  8673183 actcaatgccataaaaattttgtcctgtgctgttttgccttgtgttgtactgttctatcttgtactgttttgtccagtacttgctgttttgcaaaccaa 8673281  T

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Target: chr8; HSP #9
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 13407063 - 13407161
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||||||| ||||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| |||||||||||| |||||||| |||||||    
T  13407063 actcaatgctataaaaaatttgtcatgtgttgttctgccttgtgttgtactgttctatattgtactgttctgtccagtacttactgttttgtaaaccaa 13407161  T

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Target: chr8; HSP #10
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 27103936 - 27103842
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaa 95  Q
    ||||||||||||||||||||||||||||| ||||||||||| || |||| ||||||||||||||||||| ||||||||||||| |||||||||||    
T  27103936 actcaatgccataaaaaatttgtcatgtgctgttctgccttgtgttgtaatgttctatcttgtactgttctgtccagtacttgttgttttgcaaa 27103842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 41709754 - 41709656
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||||||||||||||||| ||||| |||| ||||||||||| || ||||||||||||||||||| |||| |||||||||||| ||||||||||||||||    
T  41709754 actcaatgccataaaaaaattgtcctgtgctgttctgccttgtgttgtactgttctatcttgtattgttctgtccagtacttactgttttgcaaaccaa 41709656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 34101485 - 34101387
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||||| ||||||||||||||||| |||| ||||||||||| || |||||||||||||||| ||||||| |||||||||||| || |||||||||||||    
T  34101485 actcaacgccataaaaaatttgtcctgtgatgttctgccttgtgttgtactgttctatcttatactgttttgtccagtacttacttttttgcaaaccaa 34101387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 3 - 99
Target Start/End: Complemental strand, 15001442 - 15001346
Alignment:
Q  3 tcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||| ||||||||||||| || |||||||||||||||| || ||| ||||||| |||||||||||| |||||||||||| ||||||||||||||||    
T  15001442 tcaataccataaaaaatttatcttgtgttgttctgccttgtgttgtgctgttctgtcttgtactgttctgtccagtacttactgttttgcaaaccaa 15001346  T

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Target: chr8; HSP #14
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 5968992 - 5969074
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttg 83  Q
    |||||||||||||||||||||||| | |||||||||||||| || |||||||||||||||||||||||| |||||| ||||||    
T  5968992 actcaatgccataaaaaatttgtcctatgttgttctgccttgtgttgtactgttctatcttgtactgttctgtccaatacttg 5969074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 12753453 - 12753550
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||||||||||||||  ||||||||||||||||||| ||| || |||| ||||||||||||||||||| |||||| ||||| ||||||||||||||||    
T  12753453 actcaatgccataaaatttttgtcatgtgttgttctgtcttgtgttgtattgttctatcttgtactgttctgtccaatactt-ctgttttgcaaaccaa 12753550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 31732041 - 31731943
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||||||||||||||| ||||||||||| | ||||| ||| || |||||||||||||||| |||| || |||||||||||| ||||||||||||||||    
T  31732041 actcaatgccataaaaattttgtcatgtgctattctgtcttgtgttgtactgttctatcttatacttttctgtccagtacttactgttttgcaaaccaa 31731943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 16 - 99
Target Start/End: Complemental strand, 45114018 - 45113935
Alignment:
Q  16 aaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||||| |||||||||||| |||||| || ||| ||| ||||||||||||||||||||||||||||| ||||||||||||||||    
T  45114018 aaatttatcatgtgttgttatgccttgtgttgtgctgctctatcttgtactgttatgtccagtacttactgttttgcaaaccaa 45113935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 3251784 - 3251882
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||||||||||||||||||||||| | || ||||||||||| || |||||||||||||||| || |||| |||||  ||||| ||||||||||||||||    
T  3251784 actcaatgccataaaaaatttgtcctatgctgttctgccttgtgttgtactgttctatcttatattgttctgtccgatacttactgttttgcaaaccaa 3251882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 29672451 - 29672549
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||||||||||| ||||||||||| |||||||||||| ||| || || |||||||||||||||| |||| |||||||| ||| ||||||| ||||||||    
T  29672451 actcaatgccatgaaaaatttgtcctgtgttgttctgtcttgtgttgcactgttctatcttgtattgttctgtccagttcttactgttttacaaaccaa 29672549  T

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Target: chr8; HSP #20
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 21272676 - 21272592
Alignment:
Q  15 aaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||||||||| | || ||||||||||| || ||||||| ||||||||||| |||| |||||| ||||||||||||||||||||||    
T  21272676 aaaatttgtcctatgctgttctgccttgtgttgtactgatctatcttgtattgttctgtccaatacttgctgttttgcaaaccaa 21272592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 3 - 99
Target Start/End: Original strand, 37618522 - 37618617
Alignment:
Q  3 tcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||||||||||| | ||||||||||| ||||||||||| || ||| ||||| | | ||||||||||||||||||||||| | ||||||||||||||    
T  37618522 tcaatgccataaaca-tttgtcatgtgctgttctgccttgtgttgtgctgttatgttttgtactgttatgtccagtacttaccgttttgcaaaccaa 37618617  T

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Target: chr8; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 31 - 99
Target Start/End: Original strand, 955094 - 955162
Alignment:
Q  31 tgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||||| ||| || |||||||||||||||||||||||| |||| |||||||||||||||| |||||||    
T  955094 tgttctgtcttgtgttgtactgttctatcttgtactgttctgtcaagtacttgctgttttgtaaaccaa 955162  T

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Target: chr8; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 99
Target Start/End: Complemental strand, 17805661 - 17805569
Alignment:
Q  7 tgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||| ||||||||||||| ||||||||||| |||| || |||  | |||| |||||||||||| |||| ||||||| ||||||||||||||||    
T  17805661 tgccctaaaaaatttgtcctgtgttgttctaccttgtgttgtgttattctgtcttgtactgttttgtcaagtacttactgttttgcaaaccaa 17805569  T

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Target: chr8; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 37861858 - 37861803
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttct 56  Q
    ||||||||||||||||||||||||||||| ||||||||||| || |||||||||||    
T  37861858 actcaatgccataaaaaatttgtcatgtgctgttctgccttgtgttgtactgttct 37861803  T

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Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 7394942 - 7395040
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||| |||||||||||| ||||| | || ||||||| ||| || |||||||||||||||| || |||| |||| ||||| | ||||||||||||||||    
T  7394942 actcagtgccataaaaaacttgtcctatgctgttctgtcttgtgttgtactgttctatcttatattgttctgtcaagtacctactgttttgcaaaccaa 7395040  T

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Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 25478220 - 25478127
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||||||||||||||||||||||      ||||||||||| || |||| ||||||||||| ||||||| |||| ||||||| ||||||| ||||||||    
T  25478220 actcaatgccataaaaaatttgtc-----ctgttctgccttgtgttgtattgttctatcttatactgttttgtcaagtacttactgttttacaaaccaa 25478127  T

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Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 14 - 99
Target Start/End: Complemental strand, 35225627 - 35225542
Alignment:
Q  14 aaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||||||||| |||||||||||| ||| || |||  ||| || ||||||||| || |||||||||||| ||||||||||||||||    
T  35225627 aaaaatttgtcttgtgttgttctgtcttgtgttgtgttgtcctgtcttgtactattctgtccagtacttactgttttgcaaaccaa 35225542  T

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Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 99
Target Start/End: Complemental strand, 40389015 - 40388920
Alignment:
Q  3 tcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||||||||||||  ||| || |||||||||||||||| || ||| ||||| | ||||||||| ||||||||||||||| |  |||||||||||||    
T  40389015 tcaatgccataaaattttt-tcctgtgttgttctgccttgtgttgtgctgttatgtcttgtactcttatgtccagtacttaccattttgcaaaccaa 40388920  T

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Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 4052459 - 4052404
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttct 56  Q
    |||||||||||||||||||||||| |||| ||||||||||| || |||||||||||    
T  4052459 actcaatgccataaaaaatttgtcctgtgctgttctgccttgtgttgtactgttct 4052404  T

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Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 30543150 - 30543205
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttct 56  Q
    |||||||||||||||| ||||||| |||||||||||||||| || |||||||||||    
T  30543150 actcaatgccataaaatatttgtcctgtgttgttctgccttgtgttgtactgttct 30543205  T

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Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 99
Target Start/End: Complemental strand, 37474684 - 37474599
Alignment:
Q  14 aaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||||||||||||||| |||| | |||| |  ||| ||||||| |||||||||| ||| | | |||||||||||||||||||||||    
T  37474684 aaaaatttgtcatgtgctgttatcccttgtattgtgctgttctttcttgtactgctatatgctgtacttgctgttttgcaaaccaa 37474599  T

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Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 60 - 99
Target Start/End: Complemental strand, 4052415 - 4052376
Alignment:
Q  60 ttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  4052415 ttgtactgttctgtccagtacttgctgttttgcaaaccaa 4052376  T

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Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 60 - 99
Target Start/End: Original strand, 14005216 - 14005255
Alignment:
Q  60 ttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  14005216 ttgtactgttctgtccagtacttgctgttttgcaaaccaa 14005255  T

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Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 37664411 - 37664466
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttct 56  Q
    |||||||||||||||||||||||| |||| |||||||| || || |||||||||||    
T  37664411 actcaatgccataaaaaatttgtcttgtgctgttctgcattgtgttgtactgttct 37664466  T

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Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 14 - 99
Target Start/End: Complemental strand, 22999222 - 22999137
Alignment:
Q  14 aaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||||||||  |||| |||||| |||| |  ||| ||||||| |||||||||||| |||   |||||||||||||||||||||||    
T  22999222 aaaaatttgttctgtgctgttctcccttgtattgtgctgttctttcttgtactgttttgtattgtacttgctgttttgcaaaccaa 22999137  T

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Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 14 - 99
Target Start/End: Complemental strand, 30501110 - 30501025
Alignment:
Q  14 aaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||||||||| | || |||| || |||||| |||  |||||| ||||||||| ||||||| |||| ||| |||||||||||||||    
T  30501110 aaaaatttgtcctatggtgttttgtcttatgttgtgttgttctgtcttgtactattatgtcaagtatttgttgttttgcaaaccaa 30501025  T

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Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 14005172 - 14005227
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttct 56  Q
    |||||||| ||||||||||||||| | |||||||||| ||| || |||||||||||    
T  14005172 actcaatgtcataaaaaatttgtcctatgttgttctgtcttgtgttgtactgttct 14005227  T

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Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 60 - 99
Target Start/End: Original strand, 37664455 - 37664494
Alignment:
Q  60 ttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||||||||| |||||||| ||||||||||||||||||||    
T  37664455 ttgtactgttctgtccagtgcttgctgttttgcaaaccaa 37664494  T

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Target: chr6 (Bit Score: 83; Significance: 3e-39; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 15277089 - 15277187
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||||||||||||||  |||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  15277089 actcaatgccataaaatttttgtcatgtgttgttctgccttatgttgtactgttctatcttgtactgttctgtccagtacttgctgttttgcaaaccaa 15277187  T

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Target: chr6; HSP #2
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 2614873 - 2614775
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| ||||||| ||||||||||||| |||||||||||||||    
T  2614873 actcaatgccataaaaaatttgtcatgtgttgttctgccttgtgttgtactgttctatcttatactgttttgtccagtacttgttgttttgcaaaccaa 2614775  T

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Target: chr6; HSP #3
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 17867812 - 17867714
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||||||||||||||||||||||| |||||||||||||||| || ||||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  17867812 actcaatgccataaaaaatttgtcctgtgttgttctgccttgtgttgtactgttctatgttgtactgttctgtccagtacttgctgttttgcaaaccaa 17867714  T

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Target: chr6; HSP #4
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 17877595 - 17877497
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||||||||||||||||||||||| |||||||||||||||| || ||||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  17877595 actcaatgccataaaaaatttgtcctgtgttgttctgccttgtgttgtactgttctatgttgtactgttctgtccagtacttgctgttttgcaaaccaa 17877497  T

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Target: chr6; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 8 - 99
Target Start/End: Complemental strand, 32805448 - 32805357
Alignment:
Q  8 gccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||||||||||||||||||||| ||||||||||| || |||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  32805448 gccataaaaaatttgtcatgtgctgttctgccttgtgttgtattgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 32805357  T

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Target: chr6; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 29814842 - 29814744
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||||||||||||||||| ||||| |||||||||||||||| || |||||||||||||||||||||||| |||||||||||| ||||||||||||||||    
T  29814842 actcaatgccataaaaaaattgtcctgtgttgttctgccttgtgttgtactgttctatcttgtactgttctgtccagtacttactgttttgcaaaccaa 29814744  T

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Target: chr6; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 28502437 - 28502338
Alignment:
Q  1 actcaatgcca-taaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||||||||| ||||||| ||||| |||||||||||||||| || |||||||||||||||||||||||| |||||||||||| ||||||||||||||||    
T  28502437 actcaatgccaataaaaaaattgtcctgtgttgttctgccttgtgttgtactgttctatcttgtactgttctgtccagtacttactgttttgcaaaccaa 28502338  T

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Target: chr6; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 4494250 - 4494348
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||| |||||||||||||||||| ||||||||||||||||||| ||| |||||||||| ||||||||| |||| ||||||| ||||||||||||||||    
T  4494250 actcattgccataaaaaatttgtcctgtgttgttctgccttatgttgtgctgttctatcctgtactgttctgtctagtacttactgttttgcaaaccaa 4494348  T

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Target: chr6; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 11212234 - 11212136
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||||| ||||||||| ||||||| |||| ||||||||||| || |||||||||||||||||||||||| |||||| ||||||||||||||||||||||    
T  11212234 actcaaggccataaaacatttgtcctgtgctgttctgccttgtgttgtactgttctatcttgtactgttctgtccaatacttgctgttttgcaaaccaa 11212136  T

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Target: chr6; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 24203340 - 24203242
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||||||||||||||||||||||| |||| |||| |||||| || |||||||||||||| ||||||||| |||||| ||||||||||||||||||||||    
T  24203340 actcaatgccataaaaaatttgtcctgtgctgttttgccttgtgttgtactgttctatcatgtactgttctgtccaatacttgctgttttgcaaaccaa 24203242  T

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Target: chr6; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 24242641 - 24242543
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||||||| ||||||||||||||| |||| ||||||||||| || |||||| || |||||||||||||| |||||||||||||||||||||||||||||    
T  24242641 actcaatgtcataaaaaatttgtcctgtgctgttctgccttgtgttgtactcttttatcttgtactgttctgtccagtacttgctgttttgcaaaccaa 24242543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 3259660 - 3259557
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgt-----gttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaa 95  Q
    ||||||||||||||||||||||||||||     ||||||||||||| || |||||||||||||||||||||||| |||||| | ||||||||||||||||    
T  3259660 actcaatgccataaaaaatttgtcatgtcatgtgttgttctgccttgtgttgtactgttctatcttgtactgttctgtccaatccttgctgttttgcaaa 3259561  T
Q  96 ccaa 99  Q
    ||||    
T  3259560 ccaa 3259557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 3 - 99
Target Start/End: Complemental strand, 10959975 - 10959880
Alignment:
Q  3 tcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||||  |||||| |||||||||||| | |||||||||| ||||||||||||||||    
T  10959975 tcaatgccataaaaa-tttgtcatgtgttgttctgccttgtgctgtgatgttctgtcttgtactgttctatccagtacttactgttttgcaaaccaa 10959880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 3 - 95
Target Start/End: Original strand, 32410006 - 32410098
Alignment:
Q  3 tcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaa 95  Q
    |||||| |||||||||||||||||||| ||||||||||| || |||||||||||||||| ||||||| |||| |||| || ||||||||||||    
T  32410006 tcaatgtcataaaaaatttgtcatgtgctgttctgccttgtgttgtactgttctatcttatactgttctgtctagtatttactgttttgcaaa 32410098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 99
Target Start/End: Original strand, 31870254 - 31870349
Alignment:
Q  3 tcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||||||||||||| ||||||||||||||||||| ||||||  |||  |||||| |||||||||||||||| || |||||| |||||||||||||||    
T  31870254 tcaatgccataaaa-atttgtcatgtgttgttctcccttatattgtgttgttctttcttgtactgttatgtacaatacttgatgttttgcaaaccaa 31870349  T

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Target: chr6; HSP #16
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 10324263 - 10324358
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaac 96  Q
    ||||||| |||||||||||||||  |||| |||||| |||| || |||| ||||||||||||||||||| ||||| |||||| |||||||||||||    
T  10324263 actcaatcccataaaaaatttgttctgtgctgttctaccttgtgttgtaatgttctatcttgtactgttctgtccggtacttactgttttgcaaac 10324358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 15277432 - 15277522
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttg 91  Q
    ||||||||| |||||||||||||  ||||||||| | |||| || |||||||||||||||| ||||||| |||||||||||| ||||||||    
T  15277432 actcaatgctataaaaaatttgttctgtgttgttttaccttgtgttgtactgttctatcttatactgttctgtccagtacttactgttttg 15277522  T

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Target: chr6; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 32132532 - 32132597
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtact 66  Q
    |||||||||||||||||||||||| |||| ||||||||||| || |||||||||||||||||||||    
T  32132532 actcaatgccataaaaaatttgtcctgtgctgttctgccttgtgttgtactgttctatcttgtact 32132597  T

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Target: chr6; HSP #19
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 3 - 99
Target Start/End: Original strand, 3932961 - 3933057
Alignment:
Q  3 tcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||||||||||||||||||||| |||| |||| || ||| || |||||||||||||||| ||||||| | |||| |||||| | |||||||||||||    
T  3932961 tcaatgccataaaaaatttgtcctgtgctgttttgtcttgtgttgtactgttctatcttatactgttttatccaatacttgttattttgcaaaccaa 3933057  T

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Target: chr6; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 46 - 99
Target Start/End: Complemental strand, 11279071 - 11279018
Alignment:
Q  46 tgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  11279071 tgtactgttctatcttgtactgttctatccagtacttgctgttttgcaaaccaa 11279018  T

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Target: chr6; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 31 - 99
Target Start/End: Complemental strand, 11382040 - 11381972
Alignment:
Q  31 tgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||||||||| || |||||||||||||||||||||||| ||| |||||||| || |||||||||||||    
T  11382040 tgttctgccttgtgttgtactgttctatcttgtactgttctgttcagtacttactattttgcaaaccaa 11381972  T

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Target: chr6; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 16 - 99
Target Start/End: Complemental strand, 17443225 - 17443142
Alignment:
Q  16 aaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||||||| |||| |||| |||||| || |||  ||||||||||||||||||| |||||| || |||||||||||||||||||    
T  17443225 aaatttgtcctgtgctgttatgccttgtgttgtgttgttctatcttgtactgttctgtccaatatttgctgttttgcaaaccaa 17443142  T

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Target: chr6; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 46 - 99
Target Start/End: Original strand, 11613973 - 11614026
Alignment:
Q  46 tgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||||||||||||| ||||||||| |||||| ||||||||||||||||||||||    
T  11613973 tgtactgttctatcgtgtactgttctgtccaatacttgctgttttgcaaaccaa 11614026  T

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Target: chr6; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 99
Target Start/End: Complemental strand, 23636198 - 23636103
Alignment:
Q  3 tcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||||||||||||||| | |||||||   |||||||||| || |||  |||||| |||||||||||||| ||||||| || ||||||||||||||||    
T  23636198 tcaatgccataaaaaact-gtcatgtacagttctgccttctgttgtgttgttctgtcttgtactgttatatccagtatttactgttttgcaaaccaa 23636103  T

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Target: chr6; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 167075 - 167130
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttct 56  Q
    |||||||| |||||||||||||||||||| ||||||||||| || |||||||||||    
T  167075 actcaatgtcataaaaaatttgtcatgtgctgttctgccttgtgttgtactgttct 167130  T

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Target: chr6; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 98
Target Start/End: Complemental strand, 29054322 - 29054239
Alignment:
Q  15 aaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaacca 98  Q
    ||||||| || |||| ||||||| |||||| |||  ||| ||||||||||||||||||||||||||||  | ||||||||||||    
T  29054322 aaaatttatcttgtgctgttctgtcttatgttgtgttgtcctatcttgtactgttatgtccagtacttattattttgcaaacca 29054239  T

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Target: chr6; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 34176807 - 34176752
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttct 56  Q
    |||||||||||||||||||||||| |||| ||||||| |||||| |||||||||||    
T  34176807 actcaatgccataaaaaatttgtcctgtgctgttctgtcttatgttgtactgttct 34176752  T

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Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 99
Target Start/End: Original strand, 34684162 - 34684235
Alignment:
Q  26 tgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||||||| ||||||||| |||  ||| || |||||||||||| |||||| ||||| ||||||||||||||||    
T  34684162 tgtgttgttatgccttatgttgtgttgtcctgtcttgtactgttttgtccaatacttactgttttgcaaaccaa 34684235  T

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Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 99
Target Start/End: Original strand, 14925622 - 14925705
Alignment:
Q  16 aaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||||||| |||| |||| |||||| || |||  ||||||||||| ||||||||||||| |||||| ||  ||||||||||||    
T  14925622 aaatttgtcctgtgctgttatgccttgtgttgtgttgttctatcttttactgttatgtcccgtacttacttctttgcaaaccaa 14925705  T

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Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 99
Target Start/End: Complemental strand, 18057482 - 18057399
Alignment:
Q  16 aaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||||||| |||| | || |||||| || ||| |||||||||||| ||||||| | |||| ||||| ||||||||||||||||    
T  18057482 aaatttgtcctgtgctattatgccttgtgttgtgctgttctatcttttactgttctatccaatacttactgttttgcaaaccaa 18057399  T

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Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 32860016 - 32859942
Alignment:
Q  14 aaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgtt 88  Q
    ||||||||||  |||| |||||||||||||  |||  ||| |||||||||||||||||||||| ||||| |||||    
T  32860016 aaaaatttgtattgtgctgttctgccttatattgtgttgtcctatcttgtactgttatgtccaatacttactgtt 32859942  T

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Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 94
Target Start/End: Original strand, 11675541 - 11675619
Alignment:
Q  16 aaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaa 94  Q
    |||||||||||||| | || | |||| || |||  |||||| ||||||| ||||||||||| ||||| |||||||||||    
T  11675541 aaatttgtcatgtgctattttaccttttgttgtgttgttctgtcttgtattgttatgtccaatacttactgttttgcaa 11675619  T

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Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 99
Target Start/End: Complemental strand, 10485087 - 10485038
Alignment:
Q  50 ctgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||||| |||||||||||| ||| | |||||||||||||| ||||||||    
T  10485087 ctgttctttcttgtactgttctgtactgtacttgctgttttacaaaccaa 10485038  T

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Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 99
Target Start/End: Original strand, 8178048 - 8178132
Alignment:
Q  15 aaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||| |||||||||  ||||||| ||| || ||| || |||||||||||| |||| | |||||| |||  |||||||||||||||    
T  8178048 aaaacttgtcatgtactgttctgtcttgtgttgtgctattctatcttgtattgttctatccagtgcttcatgttttgcaaaccaa 8178132  T

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Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 43 - 99
Target Start/End: Complemental strand, 34176780 - 34176724
Alignment:
Q  43 tgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||||| ||||  ||| |||||||||| |||||||||||| | ||||||||||||||    
T  34176780 tgctgttctgtcttatgttgtactgttctgtccagtacttaccgttttgcaaaccaa 34176724  T

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Target: chr2 (Bit Score: 83; Significance: 3e-39; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 2086049 - 2085951
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||||||| |||||||||||||||||||||||||||||||| || |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  2086049 actcaatggcataaaaaatttgtcatgtgttgttctgccttgtgttgtactgttctatcttgtactgttctgtccagtacttgctgttttgcaaaccaa 2085951  T

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Target: chr2; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 37308633 - 37308535
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||| ||||||||||||| |||||||||||||||    
T  37308633 actcaatgccataaaaaatttgtcatgtgttgttctgccttgtgttgtactgttctatcttgtactgttctgtccagtacttgttgttttgcaaaccaa 37308535  T

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Target: chr2; HSP #3
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 39461291 - 39461193
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||||||||||||||||||||||||||| ||||||||||| || ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  39461291 actcaatgccataaaaaatttgtcatgtgctgttctgccttgtgttgtactgttctatcttgtattgttatgtccagtacttactgttttgcaaaccaa 39461193  T

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Target: chr2; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 16104251 - 16104153
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||||||||||||||||||||| | |||||||||||||||| || |||||||||||||||||||||||| ||||||||||||| |||||||||||||||    
T  16104251 actcaatgccataaaaaatttgccctgtgttgttctgccttgtgttgtactgttctatcttgtactgttttgtccagtacttgttgttttgcaaaccaa 16104153  T

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Target: chr2; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 18685813 - 18685715
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||||||||||||||||||||||| |||| ||||||| ||| || |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  18685813 actcaatgccataaaaaatttgtcctgtgctgttctgtcttgtgttgtactgttctatcttgtactgttctgtccagtacttgctgttttgcaaaccaa 18685715  T

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Target: chr2; HSP #6
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 17540691 - 17540593
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||||||||||||||||| ||||||||| ||||||||||| || |||||||||||||||| ||||||| | |||||||||||||||||||||||||||    
T  17540691 actcaatgccataaaaaatatgtcatgtgctgttctgccttgtgttgtactgttctatcttatactgttctatccagtacttgctgttttgcaaaccaa 17540593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 32497892 - 32497794
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||||||||||||||||||||||| |||| ||||||||||| || ||||||||||||||||||| |||| |||||||||||| ||||||||||||||||    
T  32497892 actcaatgccataaaaaatttgtcctgtgctgttctgccttttgttgtactgttctatcttgtattgttctgtccagtacttactgttttgcaaaccaa 32497794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 34338787 - 34338689
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||||||||||||||| |||||| |||| ||||||||||| || |||||||||||||||||||||||| ||||||||||||| |||||||||||||||    
T  34338787 actcaatgccataaaaattttgtcctgtgctgttctgccttgtgttgtactgttctatcttgtactgttctgtccagtacttgttgttttgcaaaccaa 34338689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 35114762 - 35114664
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||| |||||||||||||||||| ||||  |||||||||| || |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  35114762 actcattgccataaaaaatttgtcctgtgccgttctgccttgtgttgtactgttctatcttgtactgttctgtccagtacttgctgttttgcaaaccaa 35114664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 3 - 99
Target Start/End: Complemental strand, 33366585 - 33366489
Alignment:
Q  3 tcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||||||||||||||||||||| |||| ||||||| ||| || ||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  33366585 tcaatgccataaaaaatttgtcctgtgctgttctgacttgtgttgtactgttctatcttgtattgttctgtccagtacttgctgttttgcaaaccaa 33366489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 4641493 - 4641399
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaa 95  Q
    ||||||||  |||||||||||||| ||||||||||||||||||| ||||||||||||| || ||||||| |||||||||||||||||||||||||    
T  4641493 actcaatggtataaaaaatttgtcctgtgttgttctgccttatgttgtactgttctatattttactgttctgtccagtacttgctgttttgcaaa 4641399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 5278947 - 5279045
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||||||||||||||||||||||| |||| ||||||||||| || |||| ||||||||||||||||||| |||| ||||||| ||||||||||||||||    
T  5278947 actcaatgccataaaaaatttgtcctgtgctgttctgccttgtgttgtattgttctatcttgtactgttctgtcaagtacttactgttttgcaaaccaa 5279045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 3 - 96
Target Start/End: Original strand, 9733045 - 9733138
Alignment:
Q  3 tcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaac 96  Q
    |||||||||||||||||||||| ||||  |||||||||| || |||||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  9733045 tcaatgccataaaaaatttgtcctgtgccgttctgccttgtgttgtactgttctatcttatactgttctgtccagtacttgctgttttgcaaac 9733138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 2645199 - 2645297
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||||||||||||||||||||||  ||| |||||||||||||| |||||||||||||||| ||||||| | || |||||||| |||||||||||||||    
T  2645199 actcaatgccataaaaaatttgtccagtgctgttctgccttatgttgtactgttctatcttatactgttctatcaagtacttgttgttttgcaaaccaa 2645297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 30326444 - 30326542
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||||| ||||||||| |||||| |||| ||||||||||| || ||||| |||||||||||||||||| ||||||||||||||| |||||||||||||    
T  30326444 actcaattccataaaaattttgtcctgtgctgttctgccttgtgttgtacggttctatcttgtactgttctgtccagtacttgctcttttgcaaaccaa 30326542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 42706335 - 42706237
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||||||||||||||||||||||| |||| ||||||| ||| || |||| |||||||||||||||||||||||| ||| ||| ||||||||||||||||    
T  42706335 actcaatgccataaaaaatttgtcctgtgctgttctgtcttgtgttgtattgttctatcttgtactgttatgtcaagtgcttactgttttgcaaaccaa 42706237  T

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Target: chr2; HSP #17
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 3 - 95
Target Start/End: Complemental strand, 40692280 - 40692188
Alignment:
Q  3 tcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaa 95  Q
    |||||||||||||||||||||| |||| |||| |||||| || ||||||||||||||||||||||||||||| |||| || ||||||||||||    
T  40692280 tcaatgccataaaaaatttgtcctgtgctgttttgccttgtgttgtactgttctatcttgtactgttatgtctagtatttactgttttgcaaa 40692188  T

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Target: chr2; HSP #18
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 7258873 - 7258791
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttg 83  Q
    ||||||||||||||||||||||||||||  | ||||||||| || |||||||||||||||||||||||| |||||||||||||    
T  7258873 actcaatgccataaaaaatttgtcatgtactattctgccttgtgttgtactgttctatcttgtactgttctgtccagtacttg 7258791  T

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Target: chr2; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 44284606 - 44284516
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||        ||||||||||||||||| |||||||||||||||||||||||||||||    
T  44284606 actcaatgccataaaaaatttgtcatgtgctgttctgccttgtg--------ttctatcttgtactgttctgtccagtacttgctgttttgcaaaccaa 44284516  T

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Target: chr2; HSP #20
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 9 - 99
Target Start/End: Original strand, 30798610 - 30798698
Alignment:
Q  9 ccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||| ||||||||||||||| ||||||| |||||| |  ||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  30798610 ccatacaaaatttgtcatgtgctgttctgtcttatgtt--actgttctatcttatactgttctgtccagtacttgctgttttgcaaaccaa 30798698  T

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Target: chr2; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 18793374 - 18793472
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||||| |||||||||||||||| |||| |||||| ||||||| ||||||||||||| || ||||||| ||||||||||||  | |||||||||||||    
T  18793374 actcaatcccataaaaaatttgtcttgtgatgttctaccttatgttgtactgttctattttatactgttttgtccagtacttattattttgcaaaccaa 18793472  T

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Target: chr2; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 19513802 - 19513900
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||||| ||||||||||||||||  ||| ||||||| ||| |  |||||||||||||||||||||||| | |||||||||| ||||||||||||||||    
T  19513802 actcaataccataaaaaatttgtcccgtgctgttctgtcttctattgtactgttctatcttgtactgttttatccagtacttactgttttgcaaaccaa 19513900  T

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Target: chr2; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 42365554 - 42365456
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||||||||||||||||||| || |||||||||||||||| || |||||||||||||||| |  |||| | |||| ||||| ||||||||||||||||    
T  42365554 actcaatgccataaaaaatttatcttgtgttgttctgccttgtgttgtactgttctatcttatgttgttttttccaatacttactgttttgcaaaccaa 42365456  T

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Target: chr2; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 46 - 99
Target Start/End: Complemental strand, 9717173 - 9717120
Alignment:
Q  46 tgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  9717173 tgtactgttctatcttgtactgttctgtccagtacttgctgttttgcaaaccaa 9717120  T

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Target: chr2; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 99
Target Start/End: Original strand, 37003983 - 37004080
Alignment:
Q  3 tcaatgccataaaaaatttgtcat-gtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||||||||||||||||||||| | ||| |||| | |||| |  |||||||||||||||| ||||||| |||| ||||||||||||||||||||||||    
T  37003983 tcaatgccataaaaaatttgtccttgtgctgttttaccttgtattgtactgttctatcttatactgttctgtctagtacttgctgttttgcaaaccaa 37004080  T

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Target: chr2; HSP #26
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 28824682 - 28824762
Alignment:
Q  14 aaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaa 94  Q
    ||||||||||||||| |||||||| |||||| ||| ||||||| ||||||||||||  ||||||||||| |||||||||||    
T  28824682 aaaaatttgtcatgtattgttctgtcttatgttgtgctgttctgtcttgtactgttcagtccagtacttactgttttgcaa 28824762  T

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Target: chr2; HSP #27
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 26418900 - 26418802
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||| ||||||||||  |||||||||||||||||||||||  | ||| ||||||| ||||| |||||| |||| | ||||| ||||||||||||||||    
T  26418900 actcattgccataaaatttttgtcatgtgttgttctgccttgcgttgtgctgttctgtcttgcactgttctgtcaaatacttactgttttgcaaaccaa 26418802  T

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Target: chr2; HSP #28
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 17 - 99
Target Start/End: Original strand, 38993196 - 38993278
Alignment:
Q  17 aatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||||||| ||||||||||||||||||| ||| |||| ||||||| || |||| |||||||||||| || |||||||||||||    
T  38993196 aatttgtcttgtgttgttctgccttatgttgtgctgtcctatcttatattgttctgtccagtacttactattttgcaaaccaa 38993278  T

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Target: chr2; HSP #29
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 16 - 99
Target Start/End: Original strand, 27462927 - 27463010
Alignment:
Q  16 aaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||||||||||||||||||| |||| || ||| ||||||| | ||| |||||| | |||| ||||||||||||||||||||||    
T  27462927 aaatttgtcatgtgttgttctaccttgtgttgtgctgttctgttttgcactgttttatccaatacttgctgttttgcaaaccaa 27463010  T

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Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 14 - 99
Target Start/End: Original strand, 40832596 - 40832684
Alignment:
Q  14 aaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtact---tgctgttttgcaaaccaa 99  Q
    ||||||||||||||||||||||| |||| || ||| ||||||||||||||||| || |||| | ||||   | ||||||||||||||||    
T  40832596 aaaaatttgtcatgtgttgttctaccttgtgttgtgctgttctatcttgtactattctgtctaatacttactactgttttgcaaaccaa 40832684  T

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Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 28 - 99
Target Start/End: Original strand, 12672593 - 12672663
Alignment:
Q  28 tgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||||||||||||| || |||||||||||||||| || | ||||||| |||| || ||||||||||||||||    
T  12672593 tgttgttctgccttgtgttgtactgttctatcttata-ttttatgtctagtatttactgttttgcaaaccaa 12672663  T

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Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 33889220 - 33889165
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttct 56  Q
    ||||||| ||||||||||||||| ||||| ||||||||||| || |||||||||||    
T  33889220 actcaataccataaaaaatttgttatgtgctgttctgccttgtgttgtactgttct 33889165  T

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Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 100
Target Start/End: Original strand, 16178006 - 16178092
Alignment:
Q  14 aaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaat 100  Q
    ||||||||||| |||||||||||  ||| || |||  || | | ||||| |||||| |||||||||||| |||||||||||||||||    
T  16178006 aaaaatttgtcgtgtgttgttctatcttgtgttgtgttgatatgtcttgcactgttctgtccagtacttactgttttgcaaaccaat 16178092  T

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Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 14 - 99
Target Start/End: Complemental strand, 13829403 - 13829318
Alignment:
Q  14 aaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||||||||  |||| ||||||||||| || ||| |||||||   |||||||||| |||||| || || ||||||||||||||||    
T  13829403 aaaaatttgttctgtgatgttctgccttgtgttgtgctgttctgctttgtactgttttgtccaataattactgttttgcaaaccaa 13829318  T

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Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 26981815 - 26981884
Alignment:
Q  13 aaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtactt 82  Q
    ||||||||| || |||| ||||||||||| || ||| ||||| | |||||||||||| ||||||||||||    
T  26981815 aaaaaatttatcctgtgctgttctgccttgtgttgtgctgttttgtcttgtactgttctgtccagtactt 26981884  T

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Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 60 - 99
Target Start/End: Complemental strand, 33889176 - 33889137
Alignment:
Q  60 ttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||||||||| |||||||||||| ||||||||||||||||    
T  33889176 ttgtactgttctgtccagtacttactgttttgcaaaccaa 33889137  T

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Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 99
Target Start/End: Complemental strand, 6896133 - 6896049
Alignment:
Q  14 aaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||||||||||||||||||| |||||| || |||  ||||||   || ||||||| |||  ||||||| ||||||||||||||||    
T  6896133 aaaaatttgtcatgtgttgttatgccttgtgttgtgttgttctgcattatactgttctgt-tagtacttactgttttgcaaaccaa 6896049  T

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Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 95
Target Start/End: Original strand, 3913575 - 3913666
Alignment:
Q  3 tcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaa 95  Q
    ||||||||||||||| ||| || | |||||||||||||| || |||  |||||| |||| ||||||| | || |||| || ||||||||||||    
T  3913575 tcaatgccataaaaa-tttatcctatgttgttctgccttgtgttgtgttgttctgtcttatactgttctatcaagtatttactgttttgcaaa 3913666  T

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Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 99
Target Start/End: Complemental strand, 11114847 - 11114752
Alignment:
Q  3 tcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||||||||||||| ||| || | | |||||||| ||| || |||  |||||| ||||||||  ||||||  ||||||| ||||||||||||||||    
T  11114847 tcaatgccataaaaatttt-tcttatattgttctgtcttgtgttgtgttgttctgtcttgtacaattatgtttagtacttactgttttgcaaaccaa 11114752  T

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Target: chr5 (Bit Score: 79; Significance: 7e-37; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 2351657 - 2351559
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||||||||||||||||||| || |||||||||||||||| || |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  2351657 actcaatgccataaaaaatttatcctgtgttgttctgccttgtgttgtactgttctatcttgtactgttctgtccagtacttgctgttttgcaaaccaa 2351559  T

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Target: chr5; HSP #2
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 4818259 - 4818357
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||||||||||||||||||||||| |||||||||||||||| || || ||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  4818259 actcaatgccataaaaaatttgtcttgtgttgttctgccttgtgttgcactgttctatcttgtactgttctgtccagtacttgctgttttgcaaaccaa 4818357  T

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Target: chr5; HSP #3
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 11963318 - 11963220
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||||||||||||||||||||||||||||| |||||| || || |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  11963318 actcaatgccataaaaaatttgtcatgtgttattctgctttgtgttgtactgttctatcttgtactgttctgtccagtacttgctgttttgcaaaccaa 11963220  T

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Target: chr5; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 35701254 - 35701156
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||| |||||||||||||||||| |||||| ||||||||| || |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  35701254 actcattgccataaaaaatttgtcctgtgttattctgccttgtgttgtactgttctatcttgtactgttctgtccagtacttgctgttttgcaaaccaa 35701156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 3 - 95
Target Start/End: Complemental strand, 32528690 - 32528598
Alignment:
Q  3 tcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaa 95  Q
    ||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| |||||||||||| || |||||||||    
T  32528690 tcaatgccataaaaaatttgtcatgtgctgttctgccttatgttgtactgttctatcttgtactgttctgtccagtacttactattttgcaaa 32528598  T

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Target: chr5; HSP #6
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 3 - 99
Target Start/End: Complemental strand, 34794862 - 34794766
Alignment:
Q  3 tcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||||||| ||||||||| ||||||||||||||||||| || |||||||||||||||||||||||| |||||| ||||| ||||||||||||||||    
T  34794862 tcaatgccacaaaaaatttatcatgtgttgttctgccttgtgttgtactgttctatcttgtactgttctgtccaatacttactgttttgcaaaccaa 34794766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 7523148 - 7523050
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||||||| ||||||||||||||| |||| ||||||||||| || |||||||||||||||||||||||| |||||| ||||| ||||||||||||||||    
T  7523148 actcaatgtcataaaaaatttgtcctgtgctgttctgccttgtgttgtactgttctatcttgtactgttctgtccaatacttcctgttttgcaaaccaa 7523050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 40182441 - 40182343
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||||||||||||||||||||||||||| |||| |||||| || ||||||||||| ||||||| |||| ||||||||||||||||||||| |||||||    
T  40182441 actcaatgccataaaaaatttgtcatgtgctgttttgccttgtgttgtactgttctttcttgtattgttctgtccagtacttgctgttttggaaaccaa 40182343  T

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Target: chr5; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 41790581 - 41790679
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||||||||||||||| |||||||||||||||||||||||| || ||||||||||||| || ||||||| |||||||||||| |||||||| |||||||    
T  41790581 actcaatgccataaaatatttgtcatgtgttgttctgccttgtgttgtactgttctattttatactgttctgtccagtacttactgttttgtaaaccaa 41790679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 14 - 99
Target Start/End: Original strand, 4689829 - 4689914
Alignment:
Q  14 aaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||||||||||||||||||||||||||||| |||  |||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  4689829 aaaaatttgtcatgtgttgttctgccttatgttgtgttgttctgtcttgtactgttatgtccattacttgctgttttgcaaaccaa 4689914  T

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Target: chr5; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 8136816 - 8136718
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||||||||||||||||| ||||| ||||||||| |||||| || ||||||||||||||||||||| || |||||||||||| ||||||| ||||||||    
T  8136816 actcaatgccataaaaaaattgtcctgtgttgttatgccttgtgttgtactgttctatcttgtactattctgtccagtacttactgttttacaaaccaa 8136718  T

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Target: chr5; HSP #12
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 6284418 - 6284508
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttg 91  Q
    |||||||||||||||||||||||| |||| ||| ||||||| || |||||||||||||||| || |||| |||||||||||||||||||||    
T  6284418 actcaatgccataaaaaatttgtcttgtgctgtactgccttgtgttgtactgttctatcttatattgttctgtccagtacttgctgttttg 6284508  T

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Target: chr5; HSP #13
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 30 - 99
Target Start/End: Complemental strand, 548296 - 548227
Alignment:
Q  30 ttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||||||||||||| |||||||||||||||||||||||| ||||||||||||  |||||||||||||||    
T  548296 ttgttctgccttatgttgtactgttctatcttgtactgttctgtccagtacttaatgttttgcaaaccaa 548227  T

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Target: chr5; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 20119734 - 20119650
Alignment:
Q  15 aaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||||||||||||  ||||||||||| || ||| |||||||||||||||||||| |||||| ||||| ||||||||||||||||    
T  20119734 aaaatttgtcatgtactgttctgccttgtgttgtgctgttctatcttgtactgttctgtccaatacttactgttttgcaaaccaa 20119650  T

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Target: chr5; HSP #15
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 4 - 99
Target Start/End: Original strand, 21739283 - 21739373
Alignment:
Q  4 caatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||||||||||||||||||||      ||||||| ||| || |||||||||||||||| || ||||||||||||||||||||||||||||||||||    
T  21739283 caatgccataaaaaatttgtc-----ctgttctgtcttgtgttgtactgttctatcttatattgttatgtccagtacttgctgttttgcaaaccaa 21739373  T

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Target: chr5; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 39918484 - 39918387
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||||| | |||||| ||||||| ||||||||||| |||| || |||||||||||||||||||||||| |||||||||||| |||  |||||||||||    
T  39918484 actcaatactataaaatatttgtcctgtgttgttctaccttgtgttgtactgttctatcttgtactgttctgtccagtacttactg-attgcaaaccaa 39918387  T

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Target: chr5; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 14 - 99
Target Start/End: Complemental strand, 24036197 - 24036112
Alignment:
Q  14 aaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||||||||||||||||||||||| |||||| ||| ||||||| ||||||||||||  || ||||||||  |||||||||||||||    
T  24036197 aaaaatttgtcatgtgttgttctgtcttatgttgtgctgttctgtcttgtactgttcagtacagtacttattgttttgcaaaccaa 24036112  T

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Target: chr5; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 40489314 - 40489233
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtactt 82  Q
    |||||||||||||||||||||||||||  ||||||||| ||||| |||||||||| |||||||||| || |||||| |||||    
T  40489314 actcaatgccataaaaaatttgtcatgcattgttctgctttatgttgtactgttcaatcttgtactattctgtccaatactt 40489233  T

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Target: chr5; HSP #19
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 31770710 - 31770778
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgtt 69  Q
    |||||||||||||||||||||||| |||| ||||||||||| || |||||||||||||||| |||||||    
T  31770710 actcaatgccataaaaaatttgtcctgtgctgttctgccttgtgttgtactgttctatcttatactgtt 31770778  T

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Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 5673121 - 5673023
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||| |||||||||| ||||||| | || |||| |||||| || ||| ||||| |||||||||||||| |||| ||||||| |||||||| |||||||    
T  5673121 actcattgccataaaatatttgtcctttgatgttatgccttgtgttgtgctgttatatcttgtactgttctgtcaagtacttactgttttgtaaaccaa 5673023  T

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Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 700720 - 700805
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctg 86  Q
    ||||| ||||||||||| ||||||||||| |||||| |||| || |||| | || | |||||||||||||||||||||| ||||||    
T  700720 actcattgccataaaaattttgtcatgtgctgttctaccttgtgttgtattattttgtcttgtactgttatgtccagtatttgctg 700805  T

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Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 14 - 99
Target Start/End: Original strand, 7770410 - 7770495
Alignment:
Q  14 aaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||||||||| |||| | ||||| ||| || |||  |||||| ||||||||  ||||||||||||||||||||||||||||||||    
T  7770410 aaaaatttgtcctgtgctattctgtcttgtgttgtgttgttctgtcttgtacgattatgtccagtacttgctgttttgcaaaccaa 7770495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 24181743 - 24181798
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttct 56  Q
    |||||||||||||||||||||||| |||| ||||||||||| || |||||||||||    
T  24181743 actcaatgccataaaaaatttgtcctgtgctgttctgccttgtgttgtactgttct 24181798  T

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Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 29241355 - 29241300
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttct 56  Q
    |||||||||||||||||||||||| |||| ||||||||||| || |||||||||||    
T  29241355 actcaatgccataaaaaatttgtcctgtgctgttctgccttgtgttgtactgttct 29241300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 39788169 - 39788114
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttct 56  Q
    ||||||| ||||||||||||||||||||| |||||||| ||||| |||||||||||    
T  39788169 actcaataccataaaaaatttgtcatgtgctgttctgcattatgttgtactgttct 39788114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 99
Target Start/End: Original strand, 37148705 - 37148790
Alignment:
Q  14 aaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||||||||| |||| |||| | |||| || ||| ||||||| | || ||||||| |||||||||||| ||||||||||||||||    
T  37148705 aaaaatttgtcctgtgctgttataccttgtgttgtgctgttctgtattatactgttttgtccagtacttactgttttgcaaaccaa 37148790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 60 - 99
Target Start/End: Complemental strand, 29241311 - 29241272
Alignment:
Q  60 ttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  29241311 ttgtactgttctgtccagtacttgctgttttgcaaaccaa 29241272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 22493537 - 22493635
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||| |||||||||||||||||  |||| |||||| |||| || |||  | |||| ||||| |||||| |||||| |||||| |||||||| ||||||    
T  22493537 actcattgccataaaaaatttgttctgtgctgttctaccttgtgttgtgttattctgtcttgcactgttctgtccaatacttgttgttttgcgaaccaa 22493635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 14 - 99
Target Start/End: Complemental strand, 3735322 - 3735237
Alignment:
Q  14 aaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||||||||| | || |||||| |||| |  ||| || |||| |||||||||||| ||| |||||| ||||||||||||||||||    
T  3735322 aaaaatttgtcctatgctgttctcccttgtattgtgctattctttcttgtactgttctgtacagtacctgctgttttgcaaaccaa 3735237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 31880197 - 31880250
Alignment:
Q  3 tcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttct 56  Q
    |||||| |||||||||||||||||||  ||||||||||| || |||||||||||    
T  31880197 tcaatgtcataaaaaatttgtcatgtactgttctgccttgtgttgtactgttct 31880250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 5571761 - 5571801
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgcctt 41  Q
    |||||||||||||||||||||||| |||| |||||||||||    
T  5571761 actcaatgccataaaaaatttgtcctgtgctgttctgcctt 5571801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 60 - 99
Target Start/End: Original strand, 7208393 - 7208432
Alignment:
Q  60 ttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||||||||| ||||||||||||| |||||||||||||||    
T  7208393 ttgtactgttctgtccagtacttgttgttttgcaaaccaa 7208432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 23091423 - 23091478
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttct 56  Q
    |||||||||||||| ||||||||| |||||||||||  ||| || |||||||||||    
T  23091423 actcaatgccataagaaatttgtcttgtgttgttctatcttgtgttgtactgttct 23091478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 60 - 99
Target Start/End: Original strand, 24181787 - 24181826
Alignment:
Q  60 ttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||||||||| |||||||||||| ||||||||||||||||    
T  24181787 ttgtactgttctgtccagtacttactgttttgcaaaccaa 24181826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 14 - 69
Target Start/End: Original strand, 26180425 - 26180480
Alignment:
Q  14 aaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgtt 69  Q
    |||| ||||| ||| |||||||||||||||| ||||||||| | ||||||||||||    
T  26180425 aaaagtttgttatgggttgttctgccttatgttgtactgttatgtcttgtactgtt 26180480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 95
Target Start/End: Original strand, 7725984 - 7726021
Alignment:
Q  58 tcttgtactgttatgtccagtacttgctgttttgcaaa 95  Q
    ||||||||||||||||| ||||||| ||||||||||||    
T  7725984 tcttgtactgttatgtctagtacttactgttttgcaaa 7726021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 99
Target Start/End: Complemental strand, 31644411 - 31644327
Alignment:
Q  14 aaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||||||||| ||||||||||| |||| |  ||| || |||| |||||||||||| ||  | |||| ||||||||||||||||||    
T  31644411 aaaaatttgtcttgtgttgttctaccttgtattgtgctattct-tcttgtactgttctgcactgtacatgctgttttgcaaaccaa 31644327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 66
Target Start/End: Original strand, 22432437 - 22432489
Alignment:
Q  14 aaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtact 66  Q
    ||||||||||||||||||||||| |||| || ||| ||||||| ||| |||||    
T  22432437 aaaaatttgtcatgtgttgttctaccttgtgttgtgctgttctgtctagtact 22432489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 79; Significance: 7e-37; HSPs: 53)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 844912 - 845010
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||||||||||||||||||||||| |||| ||||||||||| || |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  844912 actcaatgccataaaaaatttgtcctgtgctgttctgccttgtgttgtactgttctatcttgtactgttctgtccagtacttgctgttttgcaaaccaa 845010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 1351622 - 1351720
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||| |||| ||||||| ||||||||||||||||    
T  1351622 actcaatgccataaaaaatttgtcatgtgttgttctgccttgtgttgtactgttctatcttgtactgttctgtcaagtacttactgttttgcaaaccaa 1351720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 5 - 99
Target Start/End: Complemental strand, 41972894 - 41972800
Alignment:
Q  5 aatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||||||||||||||||||||||| ||||||||||| || |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  41972894 aatgccataaaaaatttgtcatgtgctgttctgccttgtgttgtactgttctatcttgtactgttctgtccagtacttgctgttttgcaaaccaa 41972800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 35387499 - 35387597
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||||||||||||||||||||||||||| |||||| |||| || ||||||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  35387499 actcaatgccataaaaaatttgtcatgtgctgttctaccttgtgttgtactgttctatcttgtattattatgtccagtacttgctgttttgcaaaccaa 35387597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 7183904 - 7183806
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||||||||||||||||||||||| ||| |||||||| ||| || |||||||||||||||||||||||| |||||||||||| ||||||||||||||||    
T  7183904 actcaatgccataaaaaatttgtcctgtattgttctgtcttgtgttgtactgttctatcttgtactgttctgtccagtacttactgttttgcaaaccaa 7183806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 16386840 - 16386742
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||||||||||||||||||||||| |||| ||||||||||| |  |||||||||||||||||||||||| |||||| ||||||||||||||||||||||    
T  16386840 actcaatgccataaaaaatttgtcctgtgctgttctgccttgtattgtactgttctatcttgtactgttctgtccaatacttgctgttttgcaaaccaa 16386742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 17887933 - 17887835
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||||||||||||||||||||||||||||||||||||||| || |||| |||||||||||||||| || ||||| |||||| ||||||||||||||||    
T  17887933 actcaatgccataaaaaatttgtcatgtgttgttctgccttgtgttgtattgttctatcttgtactattctgtcccgtacttactgttttgcaaaccaa 17887835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 44738229 - 44738327
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||||||||||||||||||||||||||||||||||| |||| || |||| ||||||||||| ||||||| |||| ||||||||||||||||||||||||    
T  44738229 actcaatgccataaaaaatttgtcatgtgttgttctaccttgtgttgtattgttctatcttctactgttctgtctagtacttgctgttttgcaaaccaa 44738327  T

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Target: chr1; HSP #9
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 51703350 - 51703448
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||||||||||||||||||||||||||| ||||| |||||| || ||| ||||| |||||||||||||| |||||||||||||||||||||||||||||    
T  51703350 actcaatgccataaaaaatttgtcatgtattgttttgccttgtgttgttctgttatatcttgtactgttttgtccagtacttgctgttttgcaaaccaa 51703448  T

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Target: chr1; HSP #10
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 3 - 99
Target Start/End: Original strand, 24339827 - 24339923
Alignment:
Q  3 tcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||||||||||||||||||||| |||| ||||||||||| || |||||||||||||||||||||||| ||||||||| ||||||||||||| |||||    
T  24339827 tcaatgccataaaaaatttgtcctgtgctgttctgccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctgttttgcagaccaa 24339923  T

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Target: chr1; HSP #11
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 3 - 95
Target Start/End: Complemental strand, 42510509 - 42510417
Alignment:
Q  3 tcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaa 95  Q
    |||||||||||||||||||||| |||| ||||||||||| || |||||||||||||||||||||||| |||||||||||| ||||||||||||    
T  42510509 tcaatgccataaaaaatttgtcctgtgctgttctgccttgtgttgtactgttctatcttgtactgttctgtccagtacttactgttttgcaaa 42510417  T

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Target: chr1; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 6711234 - 6711328
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaa 95  Q
    |||||||||||||||||||||||| |||| ||||||||||| || ||||||||||||| |||||||||| ||||||||||||| |||||||||||    
T  6711234 actcaatgccataaaaaatttgtcttgtgctgttctgccttgtgttgtactgttctattttgtactgttctgtccagtacttgatgttttgcaaa 6711328  T

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Target: chr1; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 3 - 99
Target Start/End: Original strand, 38087186 - 38087281
Alignment:
Q  3 tcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||||||||||||| ||||||| |||| |||||||||||||| ||||||||||| |||||||||||||||||||||||||  |||||||||||||||    
T  38087186 tcaatgccataaaa-atttgtcctgtgctgttctgccttatgttgtactgttctgtcttgtactgttatgtccagtacttaatgttttgcaaaccaa 38087281  T

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Target: chr1; HSP #14
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 12890224 - 12890126
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||||||||||||||||||| || |||| ||||||||||| || |||||||||||||||||||||||| |||| ||||||| || |||||||||||||    
T  12890224 actcaatgccataaaaaatttatcctgtgctgttctgccttgtgttgtactgttctatcttgtactgttctgtctagtacttactattttgcaaaccaa 12890126  T

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Target: chr1; HSP #15
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 16451113 - 16451015
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||||||||||||||||||||||| |||| | ||||||| | || |||||| ||||||||||||||||| |||||||||||| ||||||||||||||||    
T  16451113 actcaatgccataaaaaatttgtcctgtgctattctgccatgtgttgtactattctatcttgtactgttctgtccagtacttactgttttgcaaaccaa 16451015  T

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Target: chr1; HSP #16
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 28340491 - 28340589
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||||||||||||||||| |||||||||  ||||||||||| || |||||||||||||||||||||||| |||||| ||||| |||||||| |||||||    
T  28340491 actcaatgccataaaaaaattgtcatgtactgttctgccttgtgttgtactgttctatcttgtactgttctgtccaatacttactgttttgtaaaccaa 28340589  T

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Target: chr1; HSP #17
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 51264481 - 51264383
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||||||||||||||||||||||| |||| | ||||| ||| || |||||||||||||||||||||||| |||||| ||||||||| ||||||||||||    
T  51264481 actcaatgccataaaaaatttgtcctgtgctattctgtcttgtgttgtactgttctatcttgtactgttctgtccaatacttgctgatttgcaaaccaa 51264383  T

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Target: chr1; HSP #18
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 45491063 - 45491161
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||||||||||| ||||||||||||||| ||||||||||| || |||| ||||||||||| || |||| ||||||||| ||||||||||||| |||||    
T  45491063 actcaatgccatacaaaatttgtcatgtgctgttctgccttgtgttgtattgttctatcttatattgttctgtccagtaattgctgttttgcataccaa 45491161  T

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Target: chr1; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 32270339 - 32270246
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||||||||||||||||||||||| | |     |||| ||| || |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  32270339 actcaatgccataaaaaatttgtcctat-----tctgtcttgtgttgtactgttctatcttgtactgttttgtccagtacttgctgttttgcaaaccaa 32270246  T

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Target: chr1; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 50540330 - 50540232
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||||||||||||||||||||| | |||| ||||||| | | || |||||||||||||||| ||||||| |||| ||||||| ||||||||||||||||    
T  50540330 actcaatgccataaaaaatttgccctgtgctgttctgacgtgtgttgtactgttctatcttatactgttctgtcaagtacttactgttttgcaaaccaa 50540232  T

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Target: chr1; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 17327837 - 17327931
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaa 95  Q
    |||||| ||||||||||||||||| | |||||||||||||| |  |||||||||||||||| ||||||| |||||| ||||| || |||||||||    
T  17327837 actcaacgccataaaaaatttgtcctatgttgttctgccttgtattgtactgttctatcttatactgttctgtccaatacttacttttttgcaaa 17327931  T

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Target: chr1; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 41968037 - 41968135
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||| || ||||||||||||||||||| |||||| ||||| || |||  |||||| |||||||||||| ||||||| |||| ||||||||||||||||    
T  41968037 actcattgtcataaaaaatttgtcatgtattgttccgccttgtgttgtgttgttctgtcttgtactgttctgtccagcacttactgttttgcaaaccaa 41968135  T

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Target: chr1; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 96
Target Start/End: Complemental strand, 46154884 - 46154791
Alignment:
Q  3 tcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaac 96  Q
    |||||| ||||||||||||||||||||  ||| || ||| || | |||||||||||||| ||||||| |||||||||||| |||||||||||||    
T  46154884 tcaatgtcataaaaaatttgtcatgtgccgttatgtcttgtgttatactgttctatcttatactgttttgtccagtacttactgttttgcaaac 46154791  T

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Target: chr1; HSP #24
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 3 - 99
Target Start/End: Original strand, 16476345 - 16476440
Alignment:
Q  3 tcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||||||||| ||| ||||||||||| |||| |||||||||  ||  ||||||||||| || ||||||||||||||||| ||||||||||||||||    
T  16476345 tcaatgccatacaaa-tttgtcatgtggtgttatgccttatgtcgtgttgttctatcttatattgttatgtccagtacttactgttttgcaaaccaa 16476440  T

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Target: chr1; HSP #25
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 3415042 - 3415140
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||||||||||||||||  |  ||||||||||| || ||| || | || ||||||||||||||||||| |||||||||||| ||||||| ||||||||    
T  3415042 actcaatgccataaaaaaaattacatgtgttgttttgtcttgtgttatattgttctatcttgtactgttttgtccagtacttactgttttacaaaccaa 3415140  T

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Target: chr1; HSP #26
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 20495079 - 20495137
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatc 59  Q
    |||||||| |||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  20495079 actcaatgtcataaaaaatttgtcatgtgctgttctgccttatgttgtactgttctatc 20495137  T

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Target: chr1; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 14 - 99
Target Start/End: Complemental strand, 25539829 - 25539744
Alignment:
Q  14 aaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||||||||| |||| | ||||||||| || |||| |||| | ||||||||||||||||||||||||| | ||||||||||||||    
T  25539829 aaaaatttgtcctgtgctattctgccttgtgttgtattgttatgtcttgtactgttatgtccagtacttaccgttttgcaaaccaa 25539744  T

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Target: chr1; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 14 - 95
Target Start/End: Original strand, 26764990 - 26765071
Alignment:
Q  14 aaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaa 95  Q
    ||||||||||| | | |||||||||||| || |||  ||||||||||||||||||| |||||||||||| ||||||||||||    
T  26764990 aaaaatttgtcctatattgttctgccttgtgttgtgttgttctatcttgtactgttctgtccagtacttactgttttgcaaa 26765071  T

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Target: chr1; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 14 - 99
Target Start/End: Complemental strand, 38663106 - 38663021
Alignment:
Q  14 aaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||||||||| ||||||||||| ||||||  |||  |||||| |||||||||||| ||| | |||||||||||||||||||||||    
T  38663106 aaaaatttgtcctgtgttgttctcccttatattgtgttgttctttcttgtactgttttgtactgtacttgctgttttgcaaaccaa 38663021  T

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Target: chr1; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 99
Target Start/End: Complemental strand, 31004116 - 31004021
Alignment:
Q  3 tcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||||||||||||| |||||| |||| |||||| |||| |  ||  ||||||| |||||||||||| ||| |||||||||||||||||||||||||    
T  31004116 tcaatgccataaaaa-tttgtcctgtgatgttctcccttgtattgcgctgttctttcttgtactgttctgtacagtacttgctgttttgcaaaccaa 31004021  T

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Target: chr1; HSP #31
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 1601159 - 1601056
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgt-----tctatcttgtactgttatgtccagtacttgctgttttgcaaa 95  Q
    ||||| |||||||||||||||||| |||||||||||||||| || |||  |||     ||| |||||||||||| |||||||||||| |||||||||| |    
T  1601159 actcattgccataaaaaatttgtcttgtgttgttctgccttgtgttgtgttgtgttgttctttcttgtactgttttgtccagtacttactgttttgcaga 1601060  T
Q  96 ccaa 99  Q
    ||||    
T  1601059 ccaa 1601056  T

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Target: chr1; HSP #32
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 39281862 - 39281783
Alignment:
Q  20 ttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||||||||||||| ||| || || ||| |||||||||||| |||| || |||||||||||| ||||||||||||||||    
T  39281862 ttgtcatgtgttgttatgcattgtgttgtgctgttctatcttatactattctgtccagtacttactgttttgcaaaccaa 39281783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 14 - 99
Target Start/End: Original strand, 11772832 - 11772917
Alignment:
Q  14 aaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||||||||| |||| | ||||||||| || |||  |||| | ||||||||||||||||||||||||| | ||||||||||||||    
T  11772832 aaaaatttgtcctgtgctattctgccttgtgttgtgttgttatgtcttgtactgttatgtccagtacttaccgttttgcaaaccaa 11772917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 14 - 99
Target Start/End: Complemental strand, 50304625 - 50304540
Alignment:
Q  14 aaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||||||||| |||| |||||| |||| |  ||| ||||||| |||||||||||| ||| | |||||||||||||||||||||||    
T  50304625 aaaaatttgtcctgtgctgttctcccttgtattgtgctgttctttcttgtactgttctgtactgtacttgctgttttgcaaaccaa 50304540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 99
Target Start/End: Complemental strand, 10384351 - 10384256
Alignment:
Q  3 tcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||||| |||||||||| |||  |||||||| |||| | || ||| ||||||  ||||||||||||||| ||||||||| ||||||||||||||||    
T  10384351 tcaatgcaataaaaaatt-gtccagtgttgttttgccctgtgttgtgctgttcggtcttgtactgttatgcccagtacttactgttttgcaaaccaa 10384256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 45 - 99
Target Start/End: Complemental strand, 16437320 - 16437266
Alignment:
Q  45 ctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||||||||||||||| ||||||| ||||||||| |||||||||| ||||||||    
T  16437320 ctgtactgttctatcttatactgttctgtccagtatttgctgttttacaaaccaa 16437266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 99
Target Start/End: Original strand, 6144186 - 6144271
Alignment:
Q  14 aaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||||||||| |||| |||||||||||||| |||  ||  ||||||||||||||| ||| ||||  || ||||||||||||||||    
T  6144186 aaaaatttgtcttgtgatgttctgccttatgttgtgttgccctatcttgtactgttctgttcagtgattactgttttgcaaaccaa 6144271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 26118405 - 26118458
Alignment:
Q  3 tcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttct 56  Q
    |||||||||||||||||||||| |||| ||||||||||| || |||||||||||    
T  26118405 tcaatgccataaaaaatttgtcctgtgctgttctgccttgtgttgtactgttct 26118458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 93
Target Start/End: Complemental strand, 570360 - 570281
Alignment:
Q  14 aaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgca 93  Q
    |||||||| || ||||||||||||| ||||| |||  |||||||||||||||| || |||| | ||||| ||||||||||    
T  570360 aaaaatttatcttgtgttgttctgctttatgttgtgttgttctatcttgtactattttgtctaatacttactgttttgca 570281  T

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Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 89
Target Start/End: Original strand, 15540090 - 15540165
Alignment:
Q  14 aaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttt 89  Q
    ||||| ||||||||||||||| |||||| || ||| |||||||   |||||||||| |||||||||||| ||||||    
T  15540090 aaaaacttgtcatgtgttgttatgccttgtgttgtgctgttctgcattgtactgttctgtccagtacttactgttt 15540165  T

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Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 60 - 99
Target Start/End: Original strand, 26118447 - 26118486
Alignment:
Q  60 ttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  26118447 ttgtactgttctgtccagtacttgctgttttgcaaaccaa 26118486  T

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Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 56
Target Start/End: Original strand, 30105872 - 30105923
Alignment:
Q  5 aatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttct 56  Q
    ||||||||||||||||||||  ||||||||||||||| || |||||||||||    
T  30105872 aatgccataaaaaatttgtccagtgttgttctgccttgtgttgtactgttct 30105923  T

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Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 60 - 99
Target Start/End: Original strand, 30105912 - 30105951
Alignment:
Q  60 ttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  30105912 ttgtactgttctgtccagtacttgctgttttgcaaaccaa 30105951  T

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Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 34663909 - 34663858
Alignment:
Q  5 aatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttct 56  Q
    ||||||||||||||||||||||||| | |||| ||||||| |||||||||||    
T  34663909 aatgccataaaaaatttgtcatgtgctcttctaccttatgttgtactgttct 34663858  T

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Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 23799670 - 23799749
Alignment:
Q  20 ttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||||||||||||||| |||| |  |||  |||||| |||||||||||| | | |||||||| |||||||| |||||||    
T  23799670 ttgtcatgtgttgttctcccttgtattgtgttgttctttcttgtactgttctatacagtacttactgttttgtaaaccaa 23799749  T

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Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 60 - 99
Target Start/End: Complemental strand, 34663869 - 34663830
Alignment:
Q  60 ttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||||||||| |||||||||||| ||||||||||||||||    
T  34663869 ttgtactgttctgtccagtacttactgttttgcaaaccaa 34663830  T

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Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 99
Target Start/End: Complemental strand, 16704707 - 16704614
Alignment:
Q  5 aatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||||||||||| |||||| |||  | |||||| ||||| | |  |||||| ||||||  ||||||||||||||||| |||||||| |||||||    
T  16704707 aatgccataaaaa-tttgtcttgtactattctgctttatgttttgttgttctgtcttgtgttgttatgtccagtactttctgttttgaaaaccaa 16704614  T

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Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 32289534 - 32289600
Alignment:
Q  3 tcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgtt 69  Q
    |||||| ||||||| |||| || | |||||||||| |||||| | |||| |||||||||||||||||    
T  32289534 tcaatgtcataaaatatttatcctatgttgttctggcttatgttatactcttctatcttgtactgtt 32289600  T

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Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 99
Target Start/End: Original strand, 6029501 - 6029586
Alignment:
Q  14 aaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||||||||| |||| |||| |||||| || ||| |||||||   || ||||||  |||||||||||| || |||||||||||||    
T  6029501 aaaaatttgtcctgtgctgttatgccttgtgttgtgctgttctgcattatactgtgctgtccagtacttactattttgcaaaccaa 6029586  T

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Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 99
Target Start/End: Complemental strand, 8838912 - 8838827
Alignment:
Q  14 aaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||||||||| ||||||| ||||  ||| || |||  |||||| |||| ||| |||||||| |||| || ||||||||||||||||    
T  8838912 aaaaatttgttatgtgtttttctatcttgtgttgtgttgttctgtcttatacagttatgtctagtatttactgttttgcaaaccaa 8838827  T

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Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 51 - 99
Target Start/End: Original strand, 25343426 - 25343474
Alignment:
Q  51 tgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||||| |||||||| |||||||| |||| || ||||||||||||||||    
T  25343426 tgttctgtcttgtacggttatgtctagtagttactgttttgcaaaccaa 25343474  T

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Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 51 - 99
Target Start/End: Original strand, 42705465 - 42705513
Alignment:
Q  51 tgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||||||||||||||||||||||||  |||||  | |||||||||||||    
T  42705465 tgttctatcttgtactgttatgtcccatacttattattttgcaaaccaa 42705513  T

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Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 46
Target Start/End: Original strand, 47093042 - 47093074
Alignment:
Q  14 aaaaatttgtcatgtgttgttctgccttatgct 46  Q
    |||||||||||||||||||||||| ||||||||    
T  47093042 aaaaatttgtcatgtgttgttctgtcttatgct 47093074  T

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Target: scaffold0208 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0208
Description:

Target: scaffold0208; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 2457 - 2555
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||||||| |||||||||||||||||||| ||||||||||| || |||||| ||||||||||||||||| |||||||||||||||||||||||||||||    
T  2457 actcaatgtcataaaaaatttgtcatgtgctgttctgccttgtgttgtactattctatcttgtactgttctgtccagtacttgctgttttgcaaaccaa 2555  T

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Target: scaffold0054 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 23554 - 23456
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||||||||||||||||||||||  ||| ||||||||||| || |||| ||||||||||||||||||| ||||||||| |||||||||||||||||||    
T  23554 actcaatgccataaaaaatttgtccagtgctgttctgccttgtgttgtattgttctatcttgtactgttctgtccagtatttgctgttttgcaaaccaa 23456  T

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Target: scaffold0014 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 101926 - 101828
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||||||||||||||||||||||| |||| |||||| ||||||  |||||||||||||||| ||||||| ||||| |||||||||||||||||||||||    
T  101926 actcaatgccataaaaaatttgtcctgtgctgttctaccttatattgtactgttctatcttatactgttctgtccggtacttgctgttttgcaaaccaa 101828  T

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Target: scaffold0169 (Bit Score: 63; Significance: 3e-27; HSPs: 2)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 12655 - 12753
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||||||| |||||||||||||| |||| ||||||| | | || |||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  12655 actcaatgctataaaaaatttgtcttgtgctgttctgacatgtgttgtactgttctatcttgtactgttctatccagtacttgctgttttgcaaaccaa 12753  T

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Target: scaffold0169; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 18173 - 18271
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||||||| |||||||||||||| |||| ||||||| | | || |||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  18173 actcaatgctataaaaaatttgtcttgtgctgttctgacatgtgttgtactgttctatcttgtactgttctatccagtacttgctgttttgcaaaccaa 18271  T

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Target: scaffold0027 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 15149 - 15051
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||||||||||||||   ||| |||||||||||||||||||||| ||||||||||||| |||||||||| ||||| |||||| ||||||||||||||||    
T  15149 actcaatgccataaattttttttcatgtgttgttctgccttatgttgtactgttctattttgtactgttctgtccggtacttactgttttgcaaaccaa 15051  T

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Target: scaffold0098 (Bit Score: 59; Significance: 6e-25; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 51416 - 51318
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||||||| ||||||||||||||| |||| ||||||| ||| |  | ||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  51416 actcaatgtcataaaaaatttgtcttgtgctgttctgtcttgtattatactgttctatattgtactgttctgtccagtacttgctgttttgcaaaccaa 51318  T

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Target: scaffold0025 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 14 - 99
Target Start/End: Original strand, 5571 - 5656
Alignment:
Q  14 aaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    ||||||||||| |||| ||||||||||| || |||  |||||| ||||||||||||||||||||||||||||||||||||||||||    
T  5571 aaaaatttgtcctgtgctgttctgccttgtgttgtgttgttctgtcttgtactgttatgtccagtacttgctgttttgcaaaccaa 5656  T

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Target: scaffold0729 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0729
Description:

Target: scaffold0729; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 4698 - 4774
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccag 77  Q
    |||||||||||||||||||||||| |||| ||||||||||| || |||||||||||||||||||||||| |||||||    
T  4698 actcaatgccataaaaaatttgtcctgtgctgttctgccttgtgttgtactgttctatcttgtactgttctgtccag 4774  T

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Target: scaffold0957 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0957
Description:

Target: scaffold0957; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 10 - 82
Target Start/End: Original strand, 2623 - 2695
Alignment:
Q  10 cataaaaaatttgtcatgtgttgttctgccttatgctgtactgttctatcttgtactgttatgtccagtactt 82  Q
    ||||||||||||||||||||||||||| |||| || |||| ||||||||||| ||||||||||||||||||||    
T  2623 cataaaaaatttgtcatgtgttgttctaccttgtgttgtattgttctatcttatactgttatgtccagtactt 2695  T

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Target: scaffold0003 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 63 - 99
Target Start/End: Complemental strand, 338802 - 338766
Alignment:
Q  63 tactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||||||||||||||||||||||||||||||||||||    
T  338802 tactgttatgtccagtacttgctgttttgcaaaccaa 338766  T

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Target: scaffold0181 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 19209 - 19262
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgtt 54  Q
    |||||||||||||||||||||| |||||| |||||| |||| || |||||||||    
T  19209 actcaatgccataaaaaatttgccatgtgctgttctaccttgtgttgtactgtt 19262  T

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Target: scaffold0360 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 15496 - 15551
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttct 56  Q
    |||||||| |||||||||||| || |||| ||||||||||| || |||||||||||    
T  15496 actcaatgtcataaaaaatttatcctgtgctgttctgccttgtgttgtactgttct 15551  T

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Target: scaffold0004 (Bit Score: 32; Significance: 0.000000008; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 373083 - 373138
Alignment:
Q  1 actcaatgccataaaaaatttgtcatgtgttgttctgccttatgctgtactgttct 56  Q
    ||||||||||||||||||||| |  | | ||||||||||||||| |||||||||||    
T  373083 actcaatgccataaaaaatttattctatattgttctgccttatgttgtactgttct 373138  T

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Target: scaffold0004; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 60 - 99
Target Start/End: Original strand, 373127 - 373166
Alignment:
Q  60 ttgtactgttatgtccagtacttgctgttttgcaaaccaa 99  Q
    |||||||||| ||| |||||||||||||||||||||||||    
T  373127 ttgtactgttctgttcagtacttgctgttttgcaaaccaa 373166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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