View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20392_high_21 (Length: 309)

Name: NF20392_high_21
Description: NF20392
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20392_high_21
NF20392_high_21
[»] chr1 (66 HSPs)
chr1 (93-245)||(39776560-39776712)
chr1 (3-95)||(15034657-15034749)
chr1 (6-87)||(34756433-34756514)
chr1 (7-93)||(4038148-4038234)
chr1 (3-87)||(45565400-45565484)
chr1 (18-95)||(23536065-23536142)
chr1 (3-95)||(27804334-27804426)
chr1 (9-93)||(47165201-47165285)
chr1 (18-93)||(15034743-15034818)
chr1 (3-63)||(5474468-5474528)
chr1 (9-93)||(24273209-24273293)
chr1 (9-95)||(26501068-26501154)
chr1 (3-85)||(28745805-28745886)
chr1 (22-95)||(4038073-4038146)
chr1 (9-97)||(8224764-8224852)
chr1 (18-97)||(27935569-27935648)
chr1 (14-97)||(29446746-29446828)
chr1 (18-93)||(30190220-30190295)
chr1 (1-55)||(15245480-15245534)
chr1 (10-96)||(38277412-38277498)
chr1 (18-87)||(27804271-27804340)
chr1 (6-95)||(50005077-50005166)
chr1 (6-93)||(6470672-6470759)
chr1 (6-85)||(44410319-44410398)
chr1 (3-55)||(23536136-23536188)
chr1 (9-97)||(28632575-28632662)
chr1 (6-97)||(43622964-43623055)
chr1 (9-84)||(44570687-44570762)
chr1 (9-96)||(49659214-49659300)
chr1 (6-95)||(31166308-31166397)
chr1 (6-55)||(32572960-32573009)
chr1 (3-55)||(17502249-17502301)
chr1 (9-84)||(37448390-37448465)
chr1 (1-55)||(27935523-27935577)
chr1 (29-94)||(32287942-32288007)
chr1 (18-87)||(34756511-34756580)
chr1 (9-86)||(37447891-37447968)
chr1 (6-55)||(40264068-40264117)
chr1 (18-87)||(40264114-40264183)
chr1 (11-87)||(37036940-37037016)
chr1 (18-87)||(28745880-28745949)
chr1 (6-55)||(37214891-37214939)
chr1 (18-87)||(50005163-50005232)
chr1 (9-93)||(946376-946458)
chr1 (9-73)||(946933-946997)
chr1 (36-84)||(32573024-32573072)
chr1 (23-87)||(38277504-38277567)
chr1 (36-96)||(44410413-44410473)
chr1 (9-55)||(41822532-41822578)
chr1 (9-87)||(51847858-51847935)
chr1 (6-103)||(10166490-10166586)
chr1 (58-99)||(15245454-15245495)
chr1 (9-66)||(15467952-15468009)
chr1 (9-69)||(31195480-31195540)
chr1 (19-55)||(45565479-45565515)
chr1 (53-96)||(5474414-5474457)
chr1 (38-85)||(32652214-32652261)
chr1 (58-97)||(34007441-34007480)
chr1 (19-93)||(49216337-49216412)
chr1 (9-52)||(50471791-50471834)
chr1 (9-55)||(44571239-44571285)
chr1 (9-63)||(47820243-47820297)
chr1 (10-55)||(32128068-32128113)
chr1 (6-63)||(47541974-47542031)
chr1 (58-98)||(32572935-32572975)
chr1 (18-70)||(37214842-37214894)
[»] chr8 (57 HSPs)
chr8 (1-93)||(17110936-17111028)
chr8 (6-93)||(3853616-3853703)
chr8 (6-93)||(3858074-3858161)
chr8 (1-87)||(4156234-4156320)
chr8 (18-96)||(17110866-17110944)
chr8 (7-93)||(14800033-14800119)
chr8 (10-93)||(33902667-33902748)
chr8 (6-83)||(13404899-13404976)
chr8 (9-98)||(33377296-33377385)
chr8 (18-95)||(42711364-42711441)
chr8 (21-87)||(8689138-8689204)
chr8 (9-95)||(23011732-23011818)
chr8 (20-97)||(40046800-40046877)
chr8 (9-93)||(24044960-24045044)
chr8 (9-93)||(29257350-29257434)
chr8 (9-93)||(44889354-44889438)
chr8 (8-95)||(11744717-11744804)
chr8 (9-87)||(29482806-29482884)
chr8 (9-87)||(44346677-44346755)
chr8 (9-97)||(36103097-36103185)
chr8 (10-97)||(14235-14321)
chr8 (10-96)||(33986001-33986087)
chr8 (9-87)||(35979003-35979081)
chr8 (1-63)||(38573462-38573524)
chr8 (18-87)||(13404833-13404902)
chr8 (9-93)||(28324661-28324745)
chr8 (36-95)||(14991690-14991749)
chr8 (33-87)||(30435252-30435306)
chr8 (18-87)||(3853700-3853769)
chr8 (18-87)||(3858158-3858227)
chr8 (9-78)||(8049269-8049338)
chr8 (9-74)||(15186816-15186881)
chr8 (9-93)||(515531-515615)
chr8 (17-93)||(31807409-31807484)
chr8 (18-97)||(33902750-33902829)
chr8 (18-61)||(32626023-32626066)
chr8 (1-55)||(30435312-30435365)
chr8 (9-60)||(13144616-13144667)
chr8 (48-95)||(27322687-27322734)
chr8 (45-96)||(32626069-32626120)
chr8 (18-93)||(37268091-37268166)
chr8 (18-73)||(40046874-40046929)
chr8 (9-95)||(1088276-1088362)
chr8 (9-55)||(26520438-26520484)
chr8 (9-55)||(30444932-30444978)
chr8 (9-55)||(34008819-34008865)
chr8 (19-60)||(8689207-8689248)
chr8 (10-87)||(9982643-9982719)
chr8 (58-99)||(14799973-14800014)
chr8 (6-55)||(42739969-42740018)
chr8 (19-55)||(7202885-7202921)
chr8 (19-70)||(21465318-21465369)
chr8 (58-93)||(30435350-30435385)
chr8 (9-55)||(29611408-29611454)
chr8 (9-66)||(21465572-21465629)
chr8 (27-55)||(7202921-7202949)
chr8 (62-102)||(42711295-42711335)
[»] chr5 (61 HSPs)
chr5 (3-95)||(15374029-15374121)
chr5 (3-92)||(20523202-20523291)
chr5 (5-98)||(40643889-40643981)
chr5 (3-95)||(2316376-2316469)
chr5 (7-96)||(9764335-9764424)
chr5 (1-101)||(40809408-40809508)
chr5 (5-92)||(3563278-3563365)
chr5 (1-103)||(32470872-32470974)
chr5 (9-93)||(22766952-22767036)
chr5 (16-93)||(26281262-26281339)
chr5 (9-96)||(927299-927386)
chr5 (9-103)||(25935276-25935370)
chr5 (3-87)||(32389978-32390062)
chr5 (9-93)||(37722880-37722964)
chr5 (20-87)||(2721557-2721624)
chr5 (9-96)||(40090400-40090487)
chr5 (18-97)||(40809337-40809416)
chr5 (9-98)||(41762201-41762290)
chr5 (22-93)||(9764426-9764497)
chr5 (18-93)||(15804322-15804397)
chr5 (3-93)||(23091963-23092052)
chr5 (15-96)||(16515099-16515180)
chr5 (20-97)||(34982212-34982288)
chr5 (9-93)||(22303856-22303940)
chr5 (17-97)||(33245366-33245446)
chr5 (18-93)||(2316463-2316537)
chr5 (18-93)||(15373960-15374035)
chr5 (18-93)||(20523133-20523208)
chr5 (9-87)||(9894308-9894386)
chr5 (9-87)||(19533893-19533971)
chr5 (9-95)||(32250084-32250169)
chr5 (18-96)||(32390056-32390134)
chr5 (18-95)||(23092046-23092123)
chr5 (9-86)||(37145487-37145564)
chr5 (3-87)||(6634083-6634167)
chr5 (39-87)||(15804399-15804447)
chr5 (9-96)||(10314646-10314733)
chr5 (16-87)||(16515011-16515081)
chr5 (38-87)||(28828373-28828422)
chr5 (18-87)||(28828431-28828500)
chr5 (18-98)||(32470966-32471044)
chr5 (48-97)||(5658772-5658821)
chr5 (36-96)||(6634012-6634072)
chr5 (13-93)||(35379344-35379423)
chr5 (38-97)||(13243453-13243514)
chr5 (9-87)||(14834830-14834908)
chr5 (9-55)||(22305132-22305178)
chr5 (6-55)||(15270837-15270886)
chr5 (6-55)||(17542344-17542393)
chr5 (9-55)||(33146211-33146257)
chr5 (9-54)||(28490031-28490076)
chr5 (19-55)||(2550348-2550384)
chr5 (9-73)||(20320634-20320698)
chr5 (58-97)||(2550324-2550363)
chr5 (44-87)||(13243514-13243557)
chr5 (20-55)||(34982293-34982328)
chr5 (58-96)||(22305109-22305147)
chr5 (9-63)||(35111256-35111310)
chr5 (19-61)||(37241598-37241640)
chr5 (9-54)||(17492634-17492679)
chr5 (9-73)||(37090301-37090365)
[»] chr4 (57 HSPs)
chr4 (3-93)||(36455907-36455997)
chr4 (1-87)||(28845877-28845963)
chr4 (2-87)||(7352818-7352903)
chr4 (6-93)||(15660255-15660342)
chr4 (3-85)||(1107121-1107203)
chr4 (1-66)||(857266-857331)
chr4 (29-98)||(7352907-7352976)
chr4 (19-103)||(1112595-1112679)
chr4 (18-93)||(857323-857398)
chr4 (6-85)||(10128046-10128125)
chr4 (18-96)||(4896716-4896794)
chr4 (3-93)||(14982280-14982369)
chr4 (15-96)||(36456007-36456088)
chr4 (6-95)||(42844541-42844630)
chr4 (9-93)||(31473849-31473933)
chr4 (18-93)||(28845955-28846030)
chr4 (18-93)||(49111396-49111471)
chr4 (9-87)||(10633038-10633116)
chr4 (9-85)||(1539649-1539725)
chr4 (9-93)||(2125857-2125941)
chr4 (9-93)||(35470122-35470206)
chr4 (9-95)||(41139473-41139557)
chr4 (3-93)||(41498489-41498580)
chr4 (11-93)||(55266852-55266934)
chr4 (16-93)||(1112704-1112781)
chr4 (20-93)||(11040968-11041040)
chr4 (18-98)||(1107046-1107127)
chr4 (35-92)||(4441338-4441395)
chr4 (24-85)||(11348327-11348388)
chr4 (9-66)||(29091164-29091221)
chr4 (3-55)||(11041036-11041088)
chr4 (9-93)||(16516171-16516255)
chr4 (19-95)||(41498575-41498651)
chr4 (36-93)||(4896648-4896705)
chr4 (6-55)||(26250981-26251030)
chr4 (3-55)||(12914067-12914119)
chr4 (36-96)||(15660180-15660240)
chr4 (36-87)||(42844645-42844696)
chr4 (7-73)||(12169039-12169104)
chr4 (9-63)||(26534523-26534577)
chr4 (44-94)||(31742874-31742924)
chr4 (29-93)||(5715744-5715808)
chr4 (9-85)||(19461725-19461801)
chr4 (18-93)||(467887-467960)
chr4 (18-97)||(26250905-26250984)
chr4 (9-55)||(42775643-42775689)
chr4 (9-95)||(42776635-42776721)
chr4 (18-87)||(10127980-10128049)
chr4 (46-87)||(42542979-42543020)
chr4 (9-95)||(31947588-31947675)
chr4 (9-73)||(46242533-46242597)
chr4 (19-95)||(52493924-52493998)
chr4 (10-61)||(16300209-16300260)
chr4 (9-87)||(9451121-9451199)
chr4 (9-55)||(53760779-53760825)
chr4 (18-55)||(4441412-4441449)
chr4 (18-51)||(14982363-14982396)
[»] chr3 (64 HSPs)
chr3 (3-97)||(44436254-44436348)
chr3 (3-93)||(44692822-44692912)
chr3 (13-103)||(49457333-49457423)
chr3 (6-85)||(31070415-31070493)
chr3 (18-111)||(44692906-44692999)
chr3 (9-93)||(5415858-5415942)
chr3 (3-95)||(9129342-9129434)
chr3 (3-95)||(9137449-9137541)
chr3 (17-93)||(46672799-46672875)
chr3 (18-97)||(27251978-27252057)
chr3 (18-95)||(9129428-9129505)
chr3 (18-95)||(9137535-9137612)
chr3 (9-87)||(21307520-21307598)
chr3 (11-96)||(34088568-34088653)
chr3 (22-94)||(5415782-5415854)
chr3 (11-93)||(36397979-36398061)
chr3 (9-97)||(42005941-42006029)
chr3 (9-93)||(47767432-47767516)
chr3 (18-93)||(28092214-28092289)
chr3 (9-96)||(53129831-53129918)
chr3 (6-55)||(46429434-46429483)
chr3 (9-85)||(19475824-19475900)
chr3 (9-93)||(37054394-37054478)
chr3 (9-93)||(53470417-53470501)
chr3 (9-96)||(671607-671694)
chr3 (18-85)||(37321558-37321625)
chr3 (18-93)||(39110394-39110469)
chr3 (9-95)||(7302344-7302430)
chr3 (10-55)||(332051-332096)
chr3 (3-55)||(27251932-27251984)
chr3 (9-73)||(30766573-30766637)
chr3 (39-99)||(35279920-35279980)
chr3 (9-93)||(48947605-48947689)
chr3 (1-55)||(25655364-25655418)
chr3 (9-101)||(7976539-7976632)
chr3 (9-85)||(30767112-30767189)
chr3 (3-96)||(40929605-40929697)
chr3 (3-55)||(28092283-28092335)
chr3 (18-60)||(44436342-44436384)
chr3 (9-87)||(52527042-52527120)
chr3 (24-93)||(46635857-46635926)
chr3 (6-51)||(47284268-47284313)
chr3 (9-73)||(31189385-31189449)
chr3 (37-96)||(46001361-46001420)
chr3 (18-93)||(46429480-46429555)
chr3 (9-59)||(13176550-13176600)
chr3 (29-87)||(44288467-44288525)
chr3 (9-83)||(47336891-47336965)
chr3 (18-55)||(332012-332049)
chr3 (6-55)||(38506861-38506910)
chr3 (36-97)||(42130688-42130749)
chr3 (6-63)||(42130764-42130821)
chr3 (36-93)||(47284328-47284385)
chr3 (49-93)||(2732639-2732683)
chr3 (9-73)||(50168598-50168662)
chr3 (9-60)||(8762159-8762210)
chr3 (58-93)||(25655315-25655350)
chr3 (18-69)||(31070490-31070541)
chr3 (9-55)||(2104772-2104818)
chr3 (9-59)||(13339451-13339501)
chr3 (58-96)||(25655403-25655441)
chr3 (18-55)||(25655335-25655372)
chr3 (6-51)||(39215880-39215925)
chr3 (19-67)||(19475923-19475971)
[»] chr7 (55 HSPs)
chr7 (10-95)||(40110735-40110820)
chr7 (14-96)||(43955514-43955596)
chr7 (7-96)||(5644674-5644763)
chr7 (6-95)||(29065817-29065906)
chr7 (6-101)||(31632714-31632809)
chr7 (18-97)||(40110822-40110901)
chr7 (6-87)||(21635957-21636038)
chr7 (16-87)||(43955596-43955667)
chr7 (7-93)||(2057468-2057554)
chr7 (1-87)||(49052852-49052935)
chr7 (7-96)||(34388262-34388351)
chr7 (9-93)||(26162112-26162196)
chr7 (113-245)||(44207967-44208099)
chr7 (22-96)||(2057392-2057466)
chr7 (9-93)||(28539143-28539227)
chr7 (9-96)||(35776930-35777017)
chr7 (9-95)||(39342617-39342703)
chr7 (1-55)||(40854007-40854061)
chr7 (18-99)||(40854053-40854135)
chr7 (6-63)||(46069421-46069478)
chr7 (9-93)||(6498740-6498824)
chr7 (3-63)||(44915264-44915324)
chr7 (9-96)||(14603237-14603324)
chr7 (1-96)||(46481943-46482038)
chr7 (9-87)||(23455222-23455300)
chr7 (24-93)||(34398938-34399008)
chr7 (9-93)||(18789221-18789305)
chr7 (9-93)||(23548586-23548670)
chr7 (9-93)||(35455804-35455888)
chr7 (9-92)||(9784906-9784989)
chr7 (9-100)||(25189201-25189292)
chr7 (9-95)||(29639190-29639276)
chr7 (18-96)||(44915192-44915270)
chr7 (18-95)||(49052784-49052860)
chr7 (22-98)||(34388353-34388429)
chr7 (9-87)||(43791098-43791174)
chr7 (23-93)||(5644766-5644836)
chr7 (29-95)||(30524253-30524319)
chr7 (18-93)||(29065903-29065978)
chr7 (9-87)||(30629063-30629141)
chr7 (9-102)||(22391562-22391655)
chr7 (9-73)||(3905634-3905698)
chr7 (5-55)||(31913256-31913306)
chr7 (9-55)||(30587878-30587924)
chr7 (9-55)||(32650611-32650657)
chr7 (18-95)||(21635883-21635960)
chr7 (10-66)||(18789544-18789600)
chr7 (36-84)||(22351874-22351922)
chr7 (33-93)||(46482044-46482104)
chr7 (9-55)||(14790151-14790197)
chr7 (9-55)||(45984378-45984424)
chr7 (9-55)||(45988738-45988784)
chr7 (46-95)||(29195707-29195756)
chr7 (58-95)||(31913234-31913271)
chr7 (19-67)||(31632828-31632876)
[»] chr2 (53 HSPs)
chr2 (1-93)||(784860-784952)
chr2 (6-95)||(27033488-27033577)
chr2 (6-93)||(41461587-41461674)
chr2 (18-95)||(14365698-14365775)
chr2 (10-93)||(14365777-14365858)
chr2 (18-94)||(14537198-14537274)
chr2 (9-96)||(10480116-10480203)
chr2 (9-93)||(13017779-13017863)
chr2 (9-101)||(33189246-33189338)
chr2 (18-93)||(11716408-11716483)
chr2 (16-95)||(17180295-17180374)
chr2 (9-95)||(769034-769120)
chr2 (7-93)||(10244177-10244263)
chr2 (9-87)||(11532242-11532320)
chr2 (9-87)||(11793901-11793979)
chr2 (10-87)||(28740602-28740679)
chr2 (9-93)||(1583798-1583882)
chr2 (3-55)||(14537268-14537320)
chr2 (9-93)||(45094460-45094544)
chr2 (18-96)||(784790-784868)
chr2 (9-95)||(11141303-11141389)
chr2 (10-60)||(14954343-14954393)
chr2 (9-95)||(39630223-39630308)
chr2 (3-96)||(11684596-11684680)
chr2 (3-55)||(3345783-3345835)
chr2 (3-55)||(11824749-11824801)
chr2 (9-85)||(30698289-30698365)
chr2 (9-95)||(7228001-7228087)
chr2 (3-85)||(11716477-11716550)
chr2 (6-87)||(40026070-40026151)
chr2 (9-93)||(35047668-35047752)
chr2 (9-96)||(3092279-3092366)
chr2 (18-96)||(41461512-41461590)
chr2 (9-66)||(32839637-32839694)
chr2 (18-102)||(14954257-14954341)
chr2 (9-67)||(7167656-7167714)
chr2 (23-93)||(8735844-8735914)
chr2 (18-96)||(17905651-17905729)
chr2 (10-57)||(11607257-11607304)
chr2 (9-55)||(8736430-8736476)
chr2 (6-87)||(740710-740791)
chr2 (18-55)||(11684674-11684711)
chr2 (11-92)||(30751338-30751418)
chr2 (18-87)||(44256191-44256259)
chr2 (10-57)||(11595355-11595402)
chr2 (9-55)||(20935744-20935790)
chr2 (58-96)||(41585710-41585748)
chr2 (58-87)||(3345852-3345881)
chr2 (18-55)||(11824718-11824755)
chr2 (6-55)||(21504488-21504537)
chr2 (58-87)||(44205678-44205707)
chr2 (19-67)||(11532169-11532217)
chr2 (9-53)||(44255674-44255718)
[»] chr6 (28 HSPs)
chr6 (5-96)||(776151-776242)
chr6 (3-93)||(9285647-9285737)
chr6 (6-87)||(9763018-9763099)
chr6 (3-97)||(6919777-6919870)
chr6 (27-98)||(8574758-8574829)
chr6 (27-93)||(8574695-8574761)
chr6 (18-87)||(6919714-6919783)
chr6 (9-102)||(34244969-34245062)
chr6 (19-87)||(15299510-15299577)
chr6 (26-93)||(776080-776147)
chr6 (9-96)||(28918162-28918249)
chr6 (9-93)||(13487275-13487359)
chr6 (9-93)||(29889423-29889507)
chr6 (9-93)||(1368477-1368561)
chr6 (21-73)||(15299419-15299471)
chr6 (36-95)||(9763114-9763173)
chr6 (9-87)||(15832472-15832550)
chr6 (6-71)||(6358237-6358302)
chr6 (9-66)||(34364770-34364827)
chr6 (58-96)||(8475176-8475214)
chr6 (9-66)||(9697489-9697546)
chr6 (53-93)||(33733432-33733472)
chr6 (30-61)||(15299474-15299505)
chr6 (9-55)||(8475199-8475245)
chr6 (60-101)||(1195343-1195384)
chr6 (10-55)||(1195371-1195416)
chr6 (18-55)||(9285731-9285768)
chr6 (9-65)||(31412929-31412985)
[»] scaffold0048 (1 HSPs)
scaffold0048 (11-87)||(82949-83025)
[»] scaffold0044 (2 HSPs)
scaffold0044 (7-87)||(56347-56427)
scaffold0044 (22-63)||(56304-56345)
[»] scaffold1562 (2 HSPs)
scaffold1562 (7-96)||(402-491)
scaffold1562 (22-87)||(493-558)
[»] scaffold1158 (2 HSPs)
scaffold1158 (7-96)||(2102-2191)
scaffold1158 (22-87)||(2035-2100)
[»] scaffold0009 (2 HSPs)
scaffold0009 (14-93)||(41997-42076)
scaffold0009 (36-95)||(42080-42139)
[»] scaffold0169 (1 HSPs)
scaffold0169 (9-97)||(4071-4159)
[»] scaffold0318 (1 HSPs)
scaffold0318 (9-93)||(2867-2950)
[»] scaffold0027 (1 HSPs)
scaffold0027 (9-73)||(10906-10970)
[»] scaffold0400 (1 HSPs)
scaffold0400 (9-92)||(4487-4570)
[»] scaffold0365 (1 HSPs)
scaffold0365 (9-92)||(5131-5214)
[»] scaffold0129 (2 HSPs)
scaffold0129 (10-97)||(19194-19280)
scaffold0129 (19-87)||(19784-19851)
[»] scaffold0301 (1 HSPs)
scaffold0301 (9-87)||(7157-7235)
[»] scaffold0337 (1 HSPs)
scaffold0337 (9-95)||(15855-15938)
[»] scaffold0065 (1 HSPs)
scaffold0065 (9-95)||(2897-2980)
[»] scaffold0002 (1 HSPs)
scaffold0002 (9-59)||(130388-130438)
[»] scaffold0240 (1 HSPs)
scaffold0240 (9-55)||(17574-17620)
[»] scaffold0039 (1 HSPs)
scaffold0039 (58-102)||(109040-109084)


Alignment Details
Target: chr1 (Bit Score: 149; Significance: 1e-78; HSPs: 66)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 93 - 245
Target Start/End: Original strand, 39776560 - 39776712
Alignment:
Q  93 ttaggatttttctaaaatattaccttccatccatgccaagaattgtgagtgtattcttttggtcaccaaatgcaacagtgtaacgacagtgttcatgcaa 192  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39776560 ttaggatttttctaaaatattaccttccatccatgccaagaattgtgagtgtattcttttggtcaccaaatgcaacagtgtaacgacagtgttcatgcaa 39776659  T
Q  193 gcgaaactgagcaaatgaccactctgaattgaaatactttggcaacactcctg 245  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39776660 gtgaaactgagcaaatgaccactctgaattgaaatactttggcaacactcctg 39776712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 3 - 95
Target Start/End: Complemental strand, 15034749 - 15034657
Alignment:
Q  3 tgaattcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactctta 95  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| |||||||    
T  15034749 tgaattcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacattcctccatccaaacacactctta 15034657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 6 - 87
Target Start/End: Complemental strand, 34756514 - 34756433
Alignment:
Q  6 attcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  34756514 attcaaacaatagaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaaca 34756433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 7 - 93
Target Start/End: Original strand, 4038148 - 4038234
Alignment:
Q  7 ttcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||||| |||||    
T  4038148 ttcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattactttccctcaaaatattcccccatccaaacacactct 4038234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 3 - 87
Target Start/End: Complemental strand, 45565484 - 45565400
Alignment:
Q  3 tgaattcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    |||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||    
T  45565484 tgaatttaaacaatagaattcaccttaaaatagttgaattccctcaaaacattacattctctcaaaacattcccccatccaaaca 45565400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 23536142 - 23536065
Alignment:
Q  18 gaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactctta 95  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||    
T  23536142 gaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactctta 23536065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 3 - 95
Target Start/End: Original strand, 27804334 - 27804426
Alignment:
Q  3 tgaattcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactctta 95  Q
    |||||||||||||||||||||| ||||||||||||||||||| || |||||||||||| |||||||||||| | ||||||||||| |||||||    
T  27804334 tgaattcaaacaatagaattcaacttaaagtagttgaattccttctaaacattacatttcctcaaaacattcctccatccaaacacactctta 27804426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 9 - 93
Target Start/End: Original strand, 47165201 - 47165285
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    |||||||| ||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| ||||||||||| |||||    
T  47165201 caaacaatggaattcaccttaaagtatttgaattccctcaaaacattacatttcctcaaaacatttctccatccaaacacactct 47165285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 15034743 - 15034818
Alignment:
Q  18 gaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||    
T  15034743 gaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactct 15034818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 5474468 - 5474528
Alignment:
Q  3 tgaattcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccc 63  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5474468 tgaattcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccc 5474528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 9 - 93
Target Start/End: Original strand, 24273209 - 24273293
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    |||||||| |||||||||| |||||| ||||||||||||| |||||||||||||||||||||||| ||||||||||||| |||||    
T  24273209 caaacaatggaattcacctcaaagtatttgaattccctcataacattacattccctcaaaacattcccccatccaaacacactct 24273293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 9 - 95
Target Start/End: Original strand, 26501068 - 26501154
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactctta 95  Q
    |||||||| |||||||| | |||||| |||||||||||||||||||||||||||||||||||||| | ||||||||||| |||||||    
T  26501068 caaacaatggaattcacatcaaagtatttgaattccctcaaaacattacattccctcaaaacattcctccatccaaacacactctta 26501154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 28745886 - 28745805
Alignment:
Q  3 tgaattcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaa 85  Q
    ||||||||||||||||||||||||||||| || ||||||||||||||| |||||||||||||||||| ||| |||||||||||    
T  28745886 tgaattcaaacaatagaattcaccttaaa-taattgaattccctcaaaccattacattccctcaaaatattcccccatccaaa 28745805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 22 - 95
Target Start/End: Complemental strand, 4038146 - 4038073
Alignment:
Q  22 tcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactctta 95  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||    
T  4038146 tcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccacccaaacacactctta 4038073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 9 - 97
Target Start/End: Complemental strand, 8224852 - 8224764
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttagg 97  Q
    |||||||| |||||||| | |||||| || ||||||||||||||||||||||||||||||||||| || |||||||||| |||||||||    
T  8224852 caaacaatggaattcacatcaaagtatttcaattccctcaaaacattacattccctcaaaacattccctcatccaaacacactcttagg 8224764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 18 - 97
Target Start/End: Original strand, 27935569 - 27935648
Alignment:
Q  18 gaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttagg 97  Q
    ||||||| || |||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||| |||||||||    
T  27935569 gaattcaactcaaagtagttgaatttcctcaaaacattacattccctcaaaatatttctccatccaaacacactcttagg 27935648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 29446828 - 29446746
Alignment:
Q  14 aatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttagg 97  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| |||| | |||||| |||||||||    
T  29446828 aatagaattcaccttaaa-tagttgaattccctcaaaacattacattccttcaaaacattcccccgttcaaacacactcttagg 29446746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 30190220 - 30190295
Alignment:
Q  18 gaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    |||||||||| ||| |||||||||| |||||||||||||||||||||||||||||| ||||||||||||| |||||    
T  30190220 gaattcacctcaaaatagttgaattacctcaaaacattacattccctcaaaacattcccccatccaaacacactct 30190295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 15245534 - 15245480
Alignment:
Q  1 gttgaattcaaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 55  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15245534 gttgaattcaaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 15245480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 96
Target Start/End: Complemental strand, 38277498 - 38277412
Alignment:
Q  10 aaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttag 96  Q
    |||||||| ||||||||| |||||||||||||||| |||||||||||||||||||||||| |||  | |||||||||| ||||||||    
T  38277498 aaacaatataattcacctcaaagtagttgaattccttcaaaacattacattccctcaaaatattctctcatccaaacacactcttag 38277412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 18 - 87
Target Start/End: Complemental strand, 27804340 - 27804271
Alignment:
Q  18 gaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    |||||||||| ||| ||||||||||||||||||| ||||||||||||||||||||| |||||||||||||    
T  27804340 gaattcacctcaaaatagttgaattccctcaaaatattacattccctcaaaacattcccccatccaaaca 27804271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 50005166 - 50005077
Alignment:
Q  6 attcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactctta 95  Q
    |||||||||||||||||||||| |||| |||||||||| ||||||||||||||||| ||||||| ||| |  |||||||||| |||||||    
T  50005166 attcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaacacactctta 50005077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 6 - 93
Target Start/End: Original strand, 6470672 - 6470759
Alignment:
Q  6 attcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    ||||||||||| |||| ||||| |||| | |||||||||||||||||||||||||| ||||||||||| | ||||||||||| |||||    
T  6470672 attcaaacaatggaatccacctcaaagaatttgaattccctcaaaacattacattctctcaaaacattccgccatccaaacacactct 6470759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 6 - 85
Target Start/End: Complemental strand, 44410398 - 44410319
Alignment:
Q  6 attcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaa 85  Q
    ||||| |||||||||||||||| ||| ||||||||||| || ||||||||||||||||||||||||||  ||||||||||    
T  44410398 attcagacaatagaattcacctcaaaatagttgaattcgcttaaaacattacattccctcaaaacattctcccatccaaa 44410319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 23536136 - 23536188
Alignment:
Q  3 tgaattcaaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 55  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  23536136 tgaattcaaacaatataattcaccttaaagtagttgaattccctcaaaacatt 23536188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 9 - 97
Target Start/End: Original strand, 28632575 - 28632662
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttagg 97  Q
    |||||||| |||||||||| |||||| |||||||| ||||||||||||||||||||| ||||||| || |||||||||| ||| |||||    
T  28632575 caaacaatggaattcacctcaaagta-ttgaattctctcaaaacattacattccctccaaacattccctcatccaaacacactattagg 28632662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 6 - 97
Target Start/End: Original strand, 43622964 - 43623055
Alignment:
Q  6 attcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttagg 97  Q
    ||||||| |||  ||||||||| |||||| || ||||  |||||||||||||||||| |||||||||| ||||||||||||| |||||||||    
T  43622964 attcaaataatgaaattcacctcaaagtatttaaattttctcaaaacattacattccatcaaaacattcccccatccaaacacactcttagg 43623055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 9 - 84
Target Start/End: Complemental strand, 44570762 - 44570687
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaa 84  Q
    |||||||| |||||||||| || ||| ||||||||| ||||||||||||||||||||||||||||  |||||||||    
T  44570762 caaacaatggaattcacctcaaggtatttgaattccttcaaaacattacattccctcaaaacattctcccatccaa 44570687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 9 - 96
Target Start/End: Complemental strand, 49659300 - 49659214
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttag 96  Q
    |||||||| |||||||||| |||||| || |||||||||  |||||||||||||||||| ||| ||||||||||||||| ||||||||    
T  49659300 caaacaatggaattcacctcaaagtatttaaattccctcgtaacattacattccctcaataca-ttccccatccaaacacactcttag 49659214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 31166397 - 31166308
Alignment:
Q  6 attcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactctta 95  Q
    ||||||||||||||||||| || ||| || ||| ||||| |||||||||||||||  ||||||||||| || |||||||||| |||||||    
T  31166397 attcaaacaatagaattcatctcaaaatatttgcattccatcaaaacattacattatctcaaaacattccctcatccaaacacactctta 31166308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 6 - 55
Target Start/End: Complemental strand, 32573009 - 32572960
Alignment:
Q  6 attcaaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 55  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  32573009 attcaaacaatagaattcacctcaaagtagttgaattccctcaaaacatt 32572960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 17502249 - 17502301
Alignment:
Q  3 tgaattcaaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 55  Q
    |||||||||| ||||||||||| ||||||||||||||||||||||||||||||    
T  17502249 tgaattcaaataatagaattcaacttaaagtagttgaattccctcaaaacatt 17502301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 9 - 84
Target Start/End: Original strand, 37448390 - 37448465
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaa 84  Q
    |||||||| |||||||| | |||||| || ||||||||||||||||||||||| ||||||||||| || |||||||    
T  37448390 caaacaatggaattcacatcaaagtatttaaattccctcaaaacattacattctctcaaaacattccctcatccaa 37448465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 27935577 - 27935523
Alignment:
Q  1 gttgaattcaaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 55  Q
    ||||||||||||||||||||||||||| ||||||||||||||  |||||||||||    
T  27935577 gttgaattcaaacaatagaattcacctgaaagtagttgaattttctcaaaacatt 27935523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 29 - 94
Target Start/End: Original strand, 32287942 - 32288007
Alignment:
Q  29 aaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactctt 94  Q
    |||||| ||||||| ||||||||||||||||||||||||||| || | ||||||||||| ||||||    
T  32287942 aaagtatttgaatttcctcaaaacattacattccctcaaaactttcctccatccaaacacactctt 32288007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 18 - 87
Target Start/End: Original strand, 34756511 - 34756580
Alignment:
Q  18 gaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    |||| ||||| ||| || ||||||||||||||||||||| ||| |||||||| |||||||||||||||||    
T  34756511 gaatccacctcaaaataattgaattccctcaaaacattatattacctcaaaatatttccccatccaaaca 34756580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 9 - 86
Target Start/End: Original strand, 37447891 - 37447968
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaac 86  Q
    |||||||| |||||||||| || ||| ||||||||| |||||||||||||||||||| ||| ||| ||| ||||||||    
T  37447891 caaacaatggaattcacctcaaggtatttgaattccttcaaaacattacattccctccaaatattcccctatccaaac 37447968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 6 - 55
Target Start/End: Complemental strand, 40264117 - 40264068
Alignment:
Q  6 attcaaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 55  Q
    ||||||||||||||||||| || |||||||||||||||||||||||||||    
T  40264117 attcaaacaatagaattcatctcaaagtagttgaattccctcaaaacatt 40264068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 18 - 87
Target Start/End: Original strand, 40264114 - 40264183
Alignment:
Q  18 gaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    |||| ||||| ||| || ||||||||||||||||||||||||| |||||||| ||| |||||||||||||    
T  40264114 gaatccacctcaaaataattgaattccctcaaaacattacattacctcaaaatattcccccatccaaaca 40264183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 87
Target Start/End: Original strand, 37036940 - 37037016
Alignment:
Q  11 aacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    |||||| ||||| || | ||| || |||||||||||||||||||||||||| ||||||||||| || ||||||||||    
T  37036940 aacaatggaatttacatcaaaatatttgaattccctcaaaacattacattcactcaaaacattccctcatccaaaca 37037016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 87
Target Start/End: Original strand, 28745880 - 28745949
Alignment:
Q  18 gaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    |||||||||| ||| ||||||||||||||||||| |||||||||||| |||| |||  | ||||||||||    
T  28745880 gaattcacctcaaaatagttgaattccctcaaaatattacattcccttaaaatattctctcatccaaaca 28745949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 55
Target Start/End: Original strand, 37214891 - 37214939
Alignment:
Q  6 attcaaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 55  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||||    
T  37214891 attcaaacaatagaattcacctcaa-gtagttgaattccctcaaaacatt 37214939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 87
Target Start/End: Original strand, 50005163 - 50005232
Alignment:
Q  18 gaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    |||| ||||| ||| || ||||||||||||||||||||||||| |||||||| ||| | |||||||||||    
T  50005163 gaatccacctcaaaataattgaattccctcaaaacattacattacctcaaaatattcctccatccaaaca 50005232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 9 - 93
Target Start/End: Complemental strand, 946458 - 946376
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    |||||||||||||||| |  |||||| || ||||||||||||||| |||||||||||||| ||||| | |||||||||| |||||    
T  946458 caaacaatagaattcatcc-aaagtatttaaattccctcaaaacaatacattccctcaaagcattt-ctcatccaaacacactct 946376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 946997 - 946933
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatt 73  Q
    |||||||| |||||||||| | |||| ||||||| |||||||| | |||||||||||||||||||    
T  946997 caaacaatggaattcacctcatagtatttgaatttcctcaaaataatacattccctcaaaacatt 946933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 36 - 84
Target Start/End: Original strand, 32573024 - 32573072
Alignment:
Q  36 ttgaattccctcaaaacattacattccctcaaaacatttccccatccaa 84  Q
    ||||||||||||||||||||||||| |||||||| ||| ||||||||||    
T  32573024 ttgaattccctcaaaacattacattacctcaaaatattcccccatccaa 32573072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 23 - 87
Target Start/End: Original strand, 38277504 - 38277567
Alignment:
Q  23 caccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    ||||| ||| || ||||||||||||||||||||||||| |||||||| | |||||||||||||||    
T  38277504 cacctcaaaataattgaattccctcaaaacattacattacctcaaaata-ttccccatccaaaca 38277567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 44410413 - 44410473
Alignment:
Q  36 ttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttag 96  Q
    ||||||||||||||||| ||||||| |||||||| ||| ||| ||||||||| ||||||||    
T  44410413 ttgaattccctcaaaactttacattacctcaaaatattccccaatccaaacacactcttag 44410473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 55
Target Start/End: Original strand, 41822532 - 41822578
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 55  Q
    |||||||| ||||||| ||||||||| ||||||||||||||||||||    
T  41822532 caaacaatggaattcatcttaaagtatttgaattccctcaaaacatt 41822578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 87
Target Start/End: Complemental strand, 51847935 - 51847858
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    ||||| || |||||||||| |||||| ||||||| | | ||||||||||||| |||||||||||| | |||||||||||    
T  51847935 caaacgatggaattcacct-aaagtatttgaatttctttaaaacattacattacctcaaaacattcctccatccaaaca 51847858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 103
Target Start/End: Complemental strand, 10166586 - 10166490
Alignment:
Q  6 attcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttaggattttt 103  Q
    |||||||||||  ||||||||| ||  || |||| |||| ||||||||||||||| || |||||||||  | |||||||||| |||||| ||||||||    
T  10166586 attcaaacaatgaaattcacctaaatatatttgagttccttcaaaacattacattaccacaaaacattctctcatccaaacacactctt-ggattttt 10166490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 58 - 99
Target Start/End: Complemental strand, 15245495 - 15245454
Alignment:
Q  58 attccctcaaaacatttccccatccaaacagactcttaggat 99  Q
    |||||||||||||||| ||||||||||||| |||||||||||    
T  15245495 attccctcaaaacattcccccatccaaacacactcttaggat 15245454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 66
Target Start/End: Original strand, 15467952 - 15468009
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctca 66  Q
    |||||||| |||||||||  |||||| ||||||||||| |||||| ||||||||||||    
T  15467952 caaacaatggaattcaccccaaagtatttgaattcccttaaaacaatacattccctca 15468009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 69
Target Start/End: Complemental strand, 31195540 - 31195480
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaa 69  Q
    |||||||| |||||||||| ||| || || |||| ||||| ||||||||||||||||||||    
T  31195540 caaacaatggaattcacctcaaaatatttaaatttcctcagaacattacattccctcaaaa 31195480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 55
Target Start/End: Original strand, 45565479 - 45565515
Alignment:
Q  19 aattcaccttaaagtagttgaattccctcaaaacatt 55  Q
    ||||||||| |||||||||||||||||||||||||||    
T  45565479 aattcacctcaaagtagttgaattccctcaaaacatt 45565515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 5474457 - 5474414
Alignment:
Q  53 attacattccctcaaaacatttccccatccaaacagactcttag 96  Q
    |||| |||||||||||||||| ||||||||||||| ||||||||    
T  5474457 attaaattccctcaaaacattcccccatccaaacacactcttag 5474414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 38 - 85
Target Start/End: Complemental strand, 32652261 - 32652214
Alignment:
Q  38 gaattccctcaaaacattacattccctcaaaacatttccccatccaaa 85  Q
    ||||| |||||||||| |||||| |||||||||||||| |||||||||    
T  32652261 gaatttcctcaaaacaatacatttcctcaaaacatttctccatccaaa 32652214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 58 - 97
Target Start/End: Original strand, 34007441 - 34007480
Alignment:
Q  58 attccctcaaaacatttccccatccaaacagactcttagg 97  Q
    |||||||||||| ||||||||||||||||| |||||||||    
T  34007441 attccctcaaaatatttccccatccaaacacactcttagg 34007480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 19 - 93
Target Start/End: Original strand, 49216337 - 49216412
Alignment:
Q  19 aattcaccttaaagtagttgaattccctcaaaacatt-acattccctcaaaacatttccccatccaaacagactct 93  Q
    |||| |||| |||||| |||||||||||| ||||||| || |||  ||||||||||||| |||||||||| |||||    
T  49216337 aatttacctcaaagtatttgaattccctcgaaacatttacgttctttcaaaacatttccacatccaaacacactct 49216412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 9 - 52
Target Start/End: Complemental strand, 50471834 - 50471791
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaac 52  Q
    ||||||||| ||||||||| |||||| |||||||||||||||||    
T  50471834 caaacaataaaattcacctgaaagtatttgaattccctcaaaac 50471791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 55
Target Start/End: Complemental strand, 44571285 - 44571239
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 55  Q
    |||||||| |||||||| | |||||| ||||||||||||||||||||    
T  44571285 caaacaatggaattcacttcaaagtatttgaattccctcaaaacatt 44571239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 63
Target Start/End: Complemental strand, 47820297 - 47820243
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccc 63  Q
    ||||||||  |||||||| ||||||| ||||||||||| |||||| |||||||||    
T  47820297 caaacaatgaaattcaccctaaagtatttgaattcccttaaaacaatacattccc 47820243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 55
Target Start/End: Complemental strand, 32128113 - 32128068
Alignment:
Q  10 aaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 55  Q
    ||||||| |||||||||  |||||| ||||||||||||||||||||    
T  32128113 aaacaatggaattcaccacaaagtatttgaattccctcaaaacatt 32128068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 63
Target Start/End: Original strand, 47541974 - 47542031
Alignment:
Q  6 attcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccc 63  Q
    |||||||||||  ||||||||| |||||| || ||||| |||| ||||||||||||||    
T  47541974 attcaaacaatgaaattcacctcaaagtatttaaattctctcataacattacattccc 47542031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 98
Target Start/End: Complemental strand, 32572975 - 32572935
Alignment:
Q  58 attccctcaaaacatttccccatccaaacagactcttagga 98  Q
    |||||||||||||||| ||||||||||||| ||||| ||||    
T  32572975 attccctcaaaacattcccccatccaaacacactctaagga 32572935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 70
Target Start/End: Complemental strand, 37214894 - 37214842
Alignment:
Q  18 gaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaac 70  Q
    |||| ||||| ||| || |||||||| |||||||||||||||| |||||||||    
T  37214894 gaatccacctcaaaataattgaattctctcaaaacattacattacctcaaaac 37214842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 85; Significance: 2e-40; HSPs: 57)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 17110936 - 17111028
Alignment:
Q  1 gttgaattcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  17110936 gttgaattcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttctccatccaaacacactct 17111028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 6 - 93
Target Start/End: Complemental strand, 3853703 - 3853616
Alignment:
Q  6 attcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    |||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| |||||    
T  3853703 attcaaacaatagaattcacctcaaagtagttgaatttcctcaaaacattacattccctcaaaacattcccccatccaaacacactct 3853616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 6 - 93
Target Start/End: Complemental strand, 3858161 - 3858074
Alignment:
Q  6 attcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    |||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| |||||    
T  3858161 attcaaacaatagaattcacctcaaagtagttgaatttcctcaaaacattacattccctcaaaacattcccccatccaaacacactct 3858074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 4156234 - 4156320
Alignment:
Q  1 gttgaattcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||  ||||||||||||    
T  4156234 gttgaattcaaacaatagaattcatcttaaagtagttgaattccctcaaaacattacattccctcaaaatattctcccatccaaaca 4156320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 17110944 - 17110866
Alignment:
Q  18 gaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttag 96  Q
    ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  17110944 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacacactcttag 17110866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 7 - 93
Target Start/End: Original strand, 14800033 - 14800119
Alignment:
Q  7 ttcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    ||||||||||| |||||||||| |||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||||| |||||    
T  14800033 ttcaaacaataaaattcaccttgaagtagttgaattccctcaaaacattactttccctcaaaatattcccccatccaaacacactct 14800119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 10 - 93
Target Start/End: Complemental strand, 33902748 - 33902667
Alignment:
Q  10 aaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| |||||    
T  33902748 aaacaatagaattcacc--aaagtagttgaattccctcaaaacattacattccctcaaaacattcctccatccaaacacactct 33902667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 13404899 - 13404976
Alignment:
Q  6 attcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatcca 83  Q
    |||||||||||| |||||| || ||||||||||||||||||||||||||||||||||||||||||||| ||| |||||    
T  13404899 attcaaacaataaaattcatctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcccctatcca 13404976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 9 - 98
Target Start/End: Original strand, 33377296 - 33377385
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttagga 98  Q
    |||||||| |||||||||  |||||| |||||||||||||||||| || |||||||||||||||| ||||||||||||| ||||||||||    
T  33377296 caaacaatggaattcaccccaaagtatttgaattccctcaaaacaatatattccctcaaaacattcccccatccaaacacactcttagga 33377385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 42711364 - 42711441
Alignment:
Q  18 gaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactctta 95  Q
    ||||||| || ||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| |||||||    
T  42711364 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacattccccaatccaaacacactctta 42711441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 21 - 87
Target Start/End: Complemental strand, 8689204 - 8689138
Alignment:
Q  21 ttcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    |||| ||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||    
T  8689204 ttcatcttaaagtagttgaattccctcaaaacattacattccttcaaaacatttctccatccaaaca 8689138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 9 - 95
Target Start/End: Complemental strand, 23011818 - 23011732
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactctta 95  Q
    |||||||| |||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||  ||| |||||||| |||||||    
T  23011818 caaacaatggaattcacctcaaagtatttgaattccctcataacattacattccctcaaaacattctcccgtccaaacacactctta 23011732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 20 - 97
Target Start/End: Complemental strand, 40046877 - 40046800
Alignment:
Q  20 attcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttagg 97  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||||   ||||||||||| |||||||||    
T  40046877 attcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacattcatccatccaaacacactcttagg 40046800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 9 - 93
Target Start/End: Complemental strand, 24045044 - 24044960
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    |||||||| |||||||||| || ||| ||||||||| |||||||||||||||||||||||||||| || |||||||||| |||||    
T  24045044 caaacaatggaattcacctcaaggtatttgaattccttcaaaacattacattccctcaaaacattccctcatccaaacacactct 24044960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 9 - 93
Target Start/End: Original strand, 29257350 - 29257434
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    |||||||| |||||||||  |||||| ||||||||||| |||||| ||||||||||||||||||| ||||||||||||| |||||    
T  29257350 caaacaatggaattcaccccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacacactct 29257434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 9 - 93
Target Start/End: Complemental strand, 44889438 - 44889354
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    |||||||| |||||||| | |||||| ||||||||||||||||||||| |||||||||||||||| | ||||||||||| |||||    
T  44889438 caaacaatggaattcacatcaaagtatttgaattccctcaaaacattatattccctcaaaacattcctccatccaaacacactct 44889354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 8 - 95
Target Start/End: Original strand, 11744717 - 11744804
Alignment:
Q  8 tcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactctta 95  Q
    |||||||||||||||||||||||| |||||||||||| ||| |||||||||||||||| ||| |||  | |||||||||| |||||||    
T  11744717 tcaaacaatagaattcaccttaaactagttgaattccttcacaacattacattccctctaaatattctctcatccaaacacactctta 11744804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 9 - 87
Target Start/End: Original strand, 29482806 - 29482884
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    |||||||| |||||||||  |||||| |||||||||||||||||| ||| ||||||||||||||| |||||||||||||    
T  29482806 caaacaatggaattcaccccaaagtatttgaattccctcaaaacaatacgttccctcaaaacattcccccatccaaaca 29482884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 9 - 87
Target Start/End: Original strand, 44346677 - 44346755
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    |||||||| |||||||||  |||||| ||||||||||| |||||| ||||||||||||||||||| |||||||||||||    
T  44346677 caaacaatggaattcaccccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaaca 44346755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 9 - 97
Target Start/End: Complemental strand, 36103185 - 36103097
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttagg 97  Q
    ||||||||  ||||||| | |||||| ||||||| ||| |||||||||||||||||||||||||| | ||||||||||| |||||||||    
T  36103185 caaacaatgcaattcacatcaaagtatttgaatttccttaaaacattacattccctcaaaacattcctccatccaaacacactcttagg 36103097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 10 - 97
Target Start/End: Complemental strand, 14321 - 14235
Alignment:
Q  10 aaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttagg 97  Q
    |||||||  ||||||||  |||||| ||||||||||| |||||||||||||||||| ||||| ||||||||||||||| |||||||||    
T  14321 aaacaatgaaattcaccccaaagtatttgaattcccttaaaacattacattccctccaaaca-ttccccatccaaacacactcttagg 14235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 10 - 96
Target Start/End: Complemental strand, 33986087 - 33986001
Alignment:
Q  10 aaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttag 96  Q
    |||||||  ||||||||| |||||| |||||||| |||||||||||||||| | |||| ||||| ||||||||||||| ||||||||    
T  33986087 aaacaatgaaattcacctcaaagtatttgaattctctcaaaacattacattacttcaagacattcccccatccaaacacactcttag 33986001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 9 - 87
Target Start/End: Original strand, 35979003 - 35979081
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    |||||||| |||||||||| |||||| ||||||||||||  || ||||||||||||||||||||| | |||||||||||    
T  35979003 caaacaatggaattcacctcaaagtatttgaattccctcttaagattacattccctcaaaacattcctccatccaaaca 35979081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 38573462 - 38573524
Alignment:
Q  1 gttgaattcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccc 63  Q
    |||||||||||||||||||||||| || |||||||||||||| |||||||||| |||||||||    
T  38573462 gttgaattcaaacaatagaattcaactcaaagtagttgaatttcctcaaaacactacattccc 38573524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 18 - 87
Target Start/End: Complemental strand, 13404902 - 13404833
Alignment:
Q  18 gaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    |||| ||||| ||| || ||||||||||||||||||||||||| |||||||| |||||||||||||||||    
T  13404902 gaatccacctcaaaataattgaattccctcaaaacattacattacctcaaaatatttccccatccaaaca 13404833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 9 - 93
Target Start/End: Original strand, 28324661 - 28324745
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    ||||||||  |||||| || || ||| ||||||||| |||||||||||||||||||||||||||| | ||||||||||| |||||    
T  28324661 caaacaatgtaattcagctcaaggtatttgaattccttcaaaacattacattccctcaaaacattcctccatccaaacacactct 28324745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 36 - 95
Target Start/End: Complemental strand, 14991749 - 14991690
Alignment:
Q  36 ttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactctta 95  Q
    ||||||| ||||||||||||||||| |||||||||||| ||||||||||||| |||||||    
T  14991749 ttgaattgcctcaaaacattacattacctcaaaacattcccccatccaaacacactctta 14991690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 33 - 87
Target Start/End: Complemental strand, 30435306 - 30435252
Alignment:
Q  33 tagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    ||||| ||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  30435306 tagttaaattccctccaaacattacattccctcaaaacatttctccatccaaaca 30435252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 18 - 87
Target Start/End: Original strand, 3853700 - 3853769
Alignment:
Q  18 gaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    |||| ||||| ||| || |||||||||||| |||||||||||| |||||||| |||||||||||||||||    
T  3853700 gaatccacctcaaaataattgaattccctccaaacattacattacctcaaaatatttccccatccaaaca 3853769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 18 - 87
Target Start/End: Original strand, 3858158 - 3858227
Alignment:
Q  18 gaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    |||| ||||| ||| || |||||||||||| |||||||||||| |||||||| |||||||||||||||||    
T  3858158 gaatccacctcaaaataattgaattccctccaaacattacattacctcaaaatatttccccatccaaaca 3858227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 9 - 78
Target Start/End: Complemental strand, 8049338 - 8049269
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttcccc 78  Q
    ||||||||  |||| |||| |||||| ||||||||||||||||||||| |||||||||||||||| ||||    
T  8049338 caaacaatgaaatttacctcaaagtatttgaattccctcaaaacattatattccctcaaaacattccccc 8049269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 15186816 - 15186881
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacattt 74  Q
    ||||||||||||||||||||||| || |||||||  ||||||||||||||||  ||||||||||||    
T  15186816 caaacaatagaattcaccttaaactatttgaatttactcaaaacattacattatctcaaaacattt 15186881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 9 - 93
Target Start/End: Original strand, 515531 - 515615
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    ||||||||  ||||||| | |||||| ||||| ||||| ||||||||||||||| |||||||||| | ||||||||||| |||||    
T  515531 caaacaatgaaattcacatcaaagtatttgaactcccttaaaacattacattccttcaaaacattcctccatccaaacacactct 515615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 17 - 93
Target Start/End: Complemental strand, 31807484 - 31807409
Alignment:
Q  17 agaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    |||||||| ||| || |||||||||||||||||||||||||||| ||||||||||||  | |||||||||| |||||    
T  31807484 agaattcaactttaaatagttgaattccctcaaaacattacatt-cctcaaaacattctctcatccaaacacactct 31807409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 97
Target Start/End: Original strand, 33902750 - 33902829
Alignment:
Q  18 gaattcaccttaaagtagtt-gaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttagg 97  Q
    |||||||||| ||||||||| ||||||||||||||||  |||||||||| ||||||| |||||||| |||| |||||||||    
T  33902750 gaattcacctcaaagtagtttgaattccctcaaaacaaaacattccctc-aaacattcccccatcccaacacactcttagg 33902829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 32626066 - 32626023
Alignment:
Q  18 gaattcaccttaaagtagttgaattccctcaaaacattacattc 61  Q
    ||||||||||||||||||||||||||||||||||||||| ||||    
T  32626066 gaattcaccttaaagtagttgaattccctcaaaacattatattc 32626023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 30435312 - 30435365
Alignment:
Q  1 gttgaattcaaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 55  Q
    |||||||| ||||||||||||| |||||||| |||||||||||||||||||||||    
T  30435312 gttgaatttaaacaatagaatttaccttaaa-tagttgaattccctcaaaacatt 30435365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 60
Target Start/End: Complemental strand, 13144667 - 13144616
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacatt 60  Q
    |||||||| |||||||||| |||||| ||||||||||||| |||||||||||    
T  13144667 caaacaatggaattcacctcaaagtatttgaattccctcataacattacatt 13144616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 48 - 95
Target Start/End: Original strand, 27322687 - 27322734
Alignment:
Q  48 aaaacattacattccctcaaaacatttccccatccaaacagactctta 95  Q
    ||||||||||||||||||||||||||  |||||||||||| |||||||    
T  27322687 aaaacattacattccctcaaaacattctcccatccaaacacactctta 27322734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 45 - 96
Target Start/End: Original strand, 32626069 - 32626120
Alignment:
Q  45 ctcaaaacattacattccctcaaaacatttccccatccaaacagactcttag 96  Q
    ||||||||||||||||||||||||| ||| |||||||||| || ||||||||    
T  32626069 ctcaaaacattacattccctcaaaagattcccccatccaagcacactcttag 32626120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 37268091 - 37268166
Alignment:
Q  18 gaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    |||| ||||| ||| || || |||||||||||||||||||||| |||||||| ||| ||| ||||||||| |||||    
T  37268091 gaatccacctcaaaataattaaattccctcaaaacattacattacctcaaaatattcccctatccaaacacactct 37268166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 73
Target Start/End: Original strand, 40046874 - 40046929
Alignment:
Q  18 gaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatt 73  Q
    |||| ||||| ||| || ||||||||||||||||||||||||| ||||||||||||    
T  40046874 gaatccacctcaaaataattgaattccctcaaaacattacattacctcaaaacatt 40046929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 95
Target Start/End: Original strand, 1088276 - 1088362
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactctta 95  Q
    |||||||| ||||| |||  ||| || ||||||| |||||||||| ||||||| ||||||||||| | ||| ||||||| |||||||    
T  1088276 caaacaatggaatttaccccaaaatatttgaatttcctcaaaacaatacattctctcaaaacattcctccacccaaacacactctta 1088362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 55
Target Start/End: Original strand, 26520438 - 26520484
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 55  Q
    |||||||| |||||||||| |||||| ||||||||||||||||||||    
T  26520438 caaacaatggaattcacctcaaagtatttgaattccctcaaaacatt 26520484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 55
Target Start/End: Original strand, 30444932 - 30444978
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 55  Q
    |||||||| |||||||||| |||||| ||||||||||||||||||||    
T  30444932 caaacaatggaattcacctcaaagtatttgaattccctcaaaacatt 30444978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 55
Target Start/End: Complemental strand, 34008865 - 34008819
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 55  Q
    |||||||| |||||||||| |||||| ||||||||||||||||||||    
T  34008865 caaacaatggaattcacctcaaagtatttgaattccctcaaaacatt 34008819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 8689207 - 8689248
Alignment:
Q  19 aattcaccttaaagtagttgaattccctcaaaacattacatt 60  Q
    |||||| ||||||||| |||||||||||||||||||||||||    
T  8689207 aattcaacttaaagtaattgaattccctcaaaacattacatt 8689248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 10 - 87
Target Start/End: Complemental strand, 9982719 - 9982643
Alignment:
Q  10 aaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    ||||||| |||||||||| ||| || || ||||| |||||||||||||||| ||| |||||| ||| |||||||||||    
T  9982719 aaacaatggaattcacctcaaaatatttaaattctctcaaaacattacattaccttaaaaca-ttctccatccaaaca 9982643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 58 - 99
Target Start/End: Complemental strand, 14800014 - 14799973
Alignment:
Q  58 attccctcaaaacatttccccatccaaacagactcttaggat 99  Q
    |||||||||||||||| ||||||||||||| |||||||||||    
T  14800014 attccctcaaaacattcccccatccaaacacactcttaggat 14799973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 55
Target Start/End: Complemental strand, 42740018 - 42739969
Alignment:
Q  6 attcaaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 55  Q
    |||| ||||||| |||||| || |||||||||||||||||||||||||||    
T  42740018 attctaacaataaaattcatctcaaagtagttgaattccctcaaaacatt 42739969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 55
Target Start/End: Complemental strand, 7202921 - 7202885
Alignment:
Q  19 aattcaccttaaagtagttgaattccctcaaaacatt 55  Q
    ||||||||| |||||||||||||||||||||||||||    
T  7202921 aattcacctcaaagtagttgaattccctcaaaacatt 7202885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 19 - 70
Target Start/End: Original strand, 21465318 - 21465369
Alignment:
Q  19 aattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaac 70  Q
    |||| ||||||||||| ||||||||||||| |||| ||||||| ||||||||    
T  21465318 aatttaccttaaagtatttgaattccctcataacactacattctctcaaaac 21465369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 58 - 93
Target Start/End: Original strand, 30435350 - 30435385
Alignment:
Q  58 attccctcaaaacatttccccatccaaacagactct 93  Q
    |||||||||||||||||||||||||||||| |||||    
T  30435350 attccctcaaaacatttccccatccaaacacactct 30435385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 55
Target Start/End: Complemental strand, 29611454 - 29611408
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 55  Q
    ||||||||  ||||||||| |||||| ||||||||||||||||||||    
T  29611454 caaacaatgaaattcacctcaaagtatttgaattccctcaaaacatt 29611408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 66
Target Start/End: Original strand, 21465572 - 21465629
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctca 66  Q
    |||||||| ||||| |||| |||||| ||||||||||||  || ||||||||||||||    
T  21465572 caaacaatggaattaacctcaaagtatttgaattccctcgtaaaattacattccctca 21465629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 55
Target Start/End: Original strand, 7202921 - 7202949
Alignment:
Q  27 ttaaagtagttgaattccctcaaaacatt 55  Q
    |||||||||||||||||||||||||||||    
T  7202921 ttaaagtagttgaattccctcaaaacatt 7202949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 102
Target Start/End: Complemental strand, 42711335 - 42711295
Alignment:
Q  62 cctcaaaacatttccccatccaaacagactcttaggatttt 102  Q
    |||||||||||||||||||||||||| ||||| ||| ||||    
T  42711335 cctcaaaacatttccccatccaaacacactctaaggttttt 42711295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 81; Significance: 4e-38; HSPs: 61)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 3 - 95
Target Start/End: Original strand, 15374029 - 15374121
Alignment:
Q  3 tgaattcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactctta 95  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||    
T  15374029 tgaattcaaacaatagaattcaccttagagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactctta 15374121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 3 - 92
Target Start/End: Original strand, 20523202 - 20523291
Alignment:
Q  3 tgaattcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactc 92  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| ||||    
T  20523202 tgaattcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattctctcaaaacattcccccatccaaacacactc 20523291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 5 - 98
Target Start/End: Original strand, 40643889 - 40643981
Alignment:
Q  5 aattcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttagga 98  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  40643889 aattcaaacaatagaattcaccttaaa-tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactcttagga 40643981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 3 - 95
Target Start/End: Complemental strand, 2316469 - 2316376
Alignment:
Q  3 tgaattcaaacaatagaattcacctt-aaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactctta 95  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| |||||||    
T  2316469 tgaattcaaacaatagaattcacctttaaagtagttgaattccctcaaaatattacattccctcaaaacattcccccatccaaacacactctta 2316376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 7 - 96
Target Start/End: Complemental strand, 9764424 - 9764335
Alignment:
Q  7 ttcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttag 96  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||||| ||||||||    
T  9764424 ttcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattactttccctcaaaatattcccccatccaaacacactcttag 9764335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 40809408 - 40809508
Alignment:
Q  1 gttgaattcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttaggatt 100  Q
    ||||||||||||||||| ||||||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||||||| ||||| ||||| ||||||    
T  40809408 gttgaattcaaacaataaaattcaccttaaagtagctgaattcactcaaaacattacattctctcaaaacatttccccatctaaacacactctaaggatt 40809507  T
Q  101 t 101  Q
    |    
T  40809508 t 40809508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 5 - 92
Target Start/End: Complemental strand, 3563365 - 3563278
Alignment:
Q  5 aattcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactc 92  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| ||||    
T  3563365 aattcaagcaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacattcccctatccaaacacactc 3563278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 32470974 - 32470872
Alignment:
Q  1 gttgaattcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttaggatt 100  Q
    |||||||||||| ||||||||| |||||||| |||||||||||| |||||||||||||||||||||||||||||| ||||||||| | ||||||||| ||    
T  32470974 gttgaattcaaataatagaatttaccttaaaatagttgaattccttcaaaacattacattccctcaaaacatttctccatccaaatacactcttaggctt 32470875  T
Q  101 ttt 103  Q
    |||    
T  32470874 ttt 32470872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 9 - 93
Target Start/End: Complemental strand, 22767036 - 22766952
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||| ||||||||||||| |||||    
T  22767036 caaacaatagaattcaccttaaagtatttgaattccctcaaaacattatattccctcaaaacattcccccatccaaacacactct 22766952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 16 - 93
Target Start/End: Original strand, 26281262 - 26281339
Alignment:
Q  16 tagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| |||||    
T  26281262 tagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacgttcccccatccaaacacactct 26281339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 9 - 96
Target Start/End: Complemental strand, 927386 - 927299
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttag 96  Q
    |||||||| |||||||||  |||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||    
T  927386 caaacaatggaattcaccccaaagtatttgaattccctcaaaacaatacattccctcaaaacatttccccatccaaacacactcttag 927299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 9 - 103
Target Start/End: Original strand, 25935276 - 25935370
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttaggattttt 103  Q
    |||||||| |||||||||| |||||| ||||||| ||||| |||||||||||||||||||||||| ||||||||||||| |||||||| ||||||    
T  25935276 caaacaatggaattcacctcaaagtatttgaatttcctcataacattacattccctcaaaacattcccccatccaaacacactcttagaattttt 25935370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 3 - 87
Target Start/End: Complemental strand, 32390062 - 32389978
Alignment:
Q  3 tgaattcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    |||||||||| |||||||||||||||| ||||||||||||||||||||| |||||||||| |||||||||| || ||||||||||    
T  32390062 tgaattcaaataatagaattcaccttagagtagttgaattccctcaaaatattacattccttcaaaacattccctcatccaaaca 32389978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 9 - 93
Target Start/End: Original strand, 37722880 - 37722964
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    |||||||| |||||||||| |||||| |||||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||    
T  37722880 caaacaatggaattcacctcaaagtatttgaattccctcaaaacattacattccctcaaaatattcccccatccaaacacactct 37722964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 20 - 87
Target Start/End: Original strand, 2721557 - 2721624
Alignment:
Q  20 attcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  2721557 attcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaaca 2721624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 9 - 96
Target Start/End: Original strand, 40090400 - 40090487
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttag 96  Q
    |||||||| |||||||||| |||||| ||||||||| ||||||||||||||| |||||||||||| ||||||||||||| ||||||||    
T  40090400 caaacaatggaattcacctcaaagtatttgaattccatcaaaacattacatttcctcaaaacattcccccatccaaacacactcttag 40090487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 18 - 97
Target Start/End: Complemental strand, 40809416 - 40809337
Alignment:
Q  18 gaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttagg 97  Q
    ||||||| || |||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||| |||||||||    
T  40809416 gaattcaactcaaagtagttgaattccctcaaaacattatattctctcaaaacatttccccatccaaacacactcttagg 40809337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 9 - 98
Target Start/End: Original strand, 41762201 - 41762290
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttagga 98  Q
    |||||||| |||||||||  |||||| ||||||||||| |||||| ||||||||||||||||||| ||||||||||||| ||||||||||    
T  41762201 caaacaatggaattcaccccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacacactcttagga 41762290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 22 - 93
Target Start/End: Original strand, 9764426 - 9764497
Alignment:
Q  22 tcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    |||||| ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| |||||    
T  9764426 tcacctcaaagtagttgaattccctcaaaacattacattccctcgaaacattcccccatccaaacacactct 9764497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 15804397 - 15804322
Alignment:
Q  18 gaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    ||||||| || ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||| |||||    
T  15804397 gaattcaactcaaagtagttgaattccctcaaaacactacattccctcaaaacattcccccatccaaacacactct 15804322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 3 - 93
Target Start/End: Complemental strand, 23092052 - 23091963
Alignment:
Q  3 tgaattcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    |||||||| | ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| | ||||||||| ||||| |||||    
T  23092052 tgaattcagaaaatagaattcaacttaaagtagttgaattccttcaaaacattacattccctcaaaata-ttccccatcaaaacacactct 23091963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 15 - 96
Target Start/End: Original strand, 16515099 - 16515180
Alignment:
Q  15 atagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttag 96  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||||||| ||||||||  | |||||||||| ||||||||    
T  16515099 atagaattcacctcaaagaagttgaattccctcaaaacattacattccctaaaaacattctctcatccaaacacactcttag 16515180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 20 - 97
Target Start/End: Complemental strand, 34982288 - 34982212
Alignment:
Q  20 attcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttagg 97  Q
    |||||||||||||| |||||||||||||||||||| |||||||||||||||||| ||| ||||||||| |||||||||    
T  34982288 attcaccttaaagtggttgaattccctcaaaacat-acattccctcaaaacattcccctatccaaacacactcttagg 34982212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 9 - 93
Target Start/End: Original strand, 22303856 - 22303940
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    ||||||||  ||||||||| || ||| ||||||||| |||||||||||||||||||||||||||| ||||||||||||| |||||    
T  22303856 caaacaatgaaattcacctcaaggtatttgaattccttcaaaacattacattccctcaaaacattcccccatccaaacacactct 22303940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 33245366 - 33245446
Alignment:
Q  17 agaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttagg 97  Q
    |||||||| |||||||||||||||||  |||||||||||||||||| |||||||||| ||||||||||||| |||| ||||    
T  33245366 agaattcaacttaaagtagttgaattttctcaaaacattacattccatcaaaacattcccccatccaaacacactcatagg 33245446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 2316463 - 2316537
Alignment:
Q  18 gaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    |||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||||| |||||    
T  2316463 gaattcacctcaaagtagttgaattctctcaaaacattacattccctcaaaacattt-tccatccaaacacactct 2316537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 15374035 - 15373960
Alignment:
Q  18 gaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||| |||   ||||||||||| |||||    
T  15374035 gaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaaaattcttccatccaaacacactct 15373960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 20523208 - 20523133
Alignment:
Q  18 gaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    |||||||||| |||||||||||||||||||| || |||||||||||||||||||||  |||||||||||| |||||    
T  20523208 gaattcacctcaaagtagttgaattccctcagaatattacattccctcaaaacattctcccatccaaacacactct 20523133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 9 - 87
Target Start/End: Original strand, 9894308 - 9894386
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    |||||||| |||||||||| |||||| |||||||||||   |||||||||||||||||||||||| |||||||||||||    
T  9894308 caaacaatggaattcacctcaaagtatttgaattccctggtaacattacattccctcaaaacattcccccatccaaaca 9894386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 9 - 87
Target Start/End: Original strand, 19533893 - 19533971
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    ||||||||  ||||||||| |||||| ||||||||||||| |||||||||||||||||||||||| | |||||||||||    
T  19533893 caaacaatgaaattcacctcaaagtatttgaattccctcataacattacattccctcaaaacattcctccatccaaaca 19533971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 9 - 95
Target Start/End: Original strand, 32250084 - 32250169
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactctta 95  Q
    |||||||| ||||||| || || ||| |||||||||||||||||||||| ||||||||||||| ||||||||||||||| |||||||    
T  32250084 caaacaatggaattcatctcaaggtatttgaattccctcaaaacattactttccctcaaaaca-ttccccatccaaacacactctta 32250169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 32390056 - 32390134
Alignment:
Q  18 gaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttag 96  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||| |||  |  ||||||||| ||||||||    
T  32390056 gaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaaaattctctaatccaaacacactcttag 32390134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 23092046 - 23092123
Alignment:
Q  18 gaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactctta 95  Q
    ||||||| || |||||||||||| ||||||||||||||||||||  |||||||||| ||||||||||||| |||||||    
T  23092046 gaattcatctgaaagtagttgaactccctcaaaacattacattcgttcaaaacattcccccatccaaacacactctta 23092123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 9 - 86
Target Start/End: Original strand, 37145487 - 37145564
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaac 86  Q
    ||||||||  ||||||||| |||||| |||||||| |||| |||||||||||||||||||||||| ||||||||||||    
T  37145487 caaacaatgaaattcacctcaaagtatttgaattctctcataacattacattccctcaaaacattcccccatccaaac 37145564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 3 - 87
Target Start/End: Original strand, 6634083 - 6634167
Alignment:
Q  3 tgaattcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    ||||||||||||||||||||||||| |||||||||||| ||| | |||| ||||||||||||| |||  || |||||||||||||    
T  6634083 tgaattcaaacaatagaattcacctcaaagtagttgaactcctttaaaatattacattccctcgaaatgttcccccatccaaaca 6634167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 39 - 87
Target Start/End: Original strand, 15804399 - 15804447
Alignment:
Q  39 aattccctcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  15804399 aattccctcaaaacattacattccctcaaaacatttccccatccaaaca 15804447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 9 - 96
Target Start/End: Complemental strand, 10314733 - 10314646
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttag 96  Q
    ||||||||||||||||| | ||| || ||||||||||| |||| |||||||| | |||||||||||| ||||||||||| ||||||||    
T  10314733 caaacaatagaattcacatcaaaatatttgaattcccttaaaatattacatttcttcaaaacatttctccatccaaacatactcttag 10314646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 87
Target Start/End: Complemental strand, 16515081 - 16515011
Alignment:
Q  16 tagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    |||||||||||| |||| ||||||||||||||||||| |||||||||||||||||| ||| |||||||||||    
T  16515081 tagaattcacctcaaagaagttgaattccctcaaaaccttacattccctcaaaaca-ttctccatccaaaca 16515011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 38 - 87
Target Start/End: Complemental strand, 28828422 - 28828373
Alignment:
Q  38 gaattccctcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||    
T  28828422 gaattccctcaaaacattacattccctcaaaacattcccccatccaaaca 28828373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 18 - 87
Target Start/End: Original strand, 28828431 - 28828500
Alignment:
Q  18 gaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    |||| ||||| ||| || ||||||||||||||||||||||||| |||||||| |||||||||||||||||    
T  28828431 gaatccacctcaaaataattgaattccctcaaaacattacattacctcaaaatatttccccatccaaaca 28828500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 18 - 98
Target Start/End: Original strand, 32470966 - 32471044
Alignment:
Q  18 gaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttagga 98  Q
    ||||||| || |||||||||||||||||||||||||||||||||||||  || |||||| |||||||||| ||||| ||||    
T  32470966 gaattcaactcaaagtagttgaattccctcaaaacattacattccctc--aagatttccacatccaaacacactctaagga 32471044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 48 - 97
Target Start/End: Complemental strand, 5658821 - 5658772
Alignment:
Q  48 aaaacattacattccctcaaaacatttccccatccaaacagactcttagg 97  Q
    |||||||||||||||||||||||||||| ||||||||||| |||||||||    
T  5658821 aaaacattacattccctcaaaacatttctccatccaaacacactcttagg 5658772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 6634072 - 6634012
Alignment:
Q  36 ttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttag 96  Q
    ||||||||||||||||||||||||| |||||||| ||  ||||||||||||| ||||||||    
T  6634072 ttgaattccctcaaaacattacattacctcaaaatatccccccatccaaacacactcttag 6634012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 93
Target Start/End: Complemental strand, 35379423 - 35379344
Alignment:
Q  13 caatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    ||||| ||||||| | |||| | |||||||||||||||||||||||||  ||||||||| ||||||||||||||| |||||    
T  35379423 caataaaattcacttcaaagaatttgaattccctcaaaacattacattatctcaaaaca-ttccccatccaaacacactct 35379344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 38 - 97
Target Start/End: Complemental strand, 13243514 - 13243453
Alignment:
Q  38 gaattccctcaaaacattacattccctcaaaacatttccccatc--caaacagactcttagg 97  Q
    |||||||||||||||||||||||||||||||||||| || ||||  |||||| |||||||||    
T  13243514 gaattccctcaaaacattacattccctcaaaacattccctcatccacaaacacactcttagg 13243453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 9 - 87
Target Start/End: Complemental strand, 14834908 - 14834830
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    ||||||||  ||||||||| |||||| ||| ||||||| |||||||||||||||||| |||||||  ||||| ||||||    
T  14834908 caaacaatgaaattcacctcaaagtatttggattcccttaaaacattacattccctcgaaacattctcccatgcaaaca 14834830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 9 - 55
Target Start/End: Complemental strand, 22305178 - 22305132
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 55  Q
    |||||||| |||||||||| |||||||||||||||||||||||||||    
T  22305178 caaacaatggaattcacctcaaagtagttgaattccctcaaaacatt 22305132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 55
Target Start/End: Original strand, 15270837 - 15270886
Alignment:
Q  6 attcaaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 55  Q
    ||||||||||| |||||||||| |||||| ||||||||||||||||||||    
T  15270837 attcaaacaatggaattcacctcaaagtatttgaattccctcaaaacatt 15270886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 55
Target Start/End: Original strand, 17542344 - 17542393
Alignment:
Q  6 attcaaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 55  Q
    ||||||||||| |||||||||| |||||| ||||||||||||||||||||    
T  17542344 attcaaacaatggaattcacctcaaagtatttgaattccctcaaaacatt 17542393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 55
Target Start/End: Complemental strand, 33146257 - 33146211
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 55  Q
    |||||||| |||||||||| |||||| ||||||||||||||||||||    
T  33146257 caaacaatggaattcacctcaaagtatttgaattccctcaaaacatt 33146211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 54
Target Start/End: Complemental strand, 28490076 - 28490031
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacat 54  Q
    |||||||| |||||||||| |||||| |||||||||||||||||||    
T  28490076 caaacaatggaattcacctcaaagtatttgaattccctcaaaacat 28490031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 55
Target Start/End: Complemental strand, 2550384 - 2550348
Alignment:
Q  19 aattcaccttaaagtagttgaattccctcaaaacatt 55  Q
    ||||||||| |||||||||||||||||||||||||||    
T  2550384 aattcacctcaaagtagttgaattccctcaaaacatt 2550348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 20320634 - 20320698
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatt 73  Q
    |||||||| ||||||||   |||||| ||||||||||| |||| |||||||||| ||||||||||    
T  20320634 caaacaatggaattcacaccaaagtatttgaattcccttaaaatattacattccttcaaaacatt 20320698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 58 - 97
Target Start/End: Complemental strand, 2550363 - 2550324
Alignment:
Q  58 attccctcaaaacatttccccatccaaacagactcttagg 97  Q
    |||||||||||||||| ||||||||||||| |||||||||    
T  2550363 attccctcaaaacattcccccatccaaacacactcttagg 2550324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 44 - 87
Target Start/End: Original strand, 13243514 - 13243557
Alignment:
Q  44 cctcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    ||||||||||||||||| |||||||| ||| |||||||||||||    
T  13243514 cctcaaaacattacattacctcaaaatattcccccatccaaaca 13243557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 20 - 55
Target Start/End: Original strand, 34982293 - 34982328
Alignment:
Q  20 attcaccttaaagtagttgaattccctcaaaacatt 55  Q
    |||||||||||||| |||||||||||||||||||||    
T  34982293 attcaccttaaagtggttgaattccctcaaaacatt 34982328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 58 - 96
Target Start/End: Complemental strand, 22305147 - 22305109
Alignment:
Q  58 attccctcaaaacatttccccatccaaacagactcttag 96  Q
    |||||||||||||||| ||||||||||||| ||||||||    
T  22305147 attccctcaaaacattcccccatccaaacacactcttag 22305109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 63
Target Start/End: Complemental strand, 35111310 - 35111256
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccc 63  Q
    |||||||||||| |||| | ||| || ||||||||| ||||||||||||||||||    
T  35111310 caaacaatagaactcacatcaaaatatttgaattccttcaaaacattacattccc 35111256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 61
Target Start/End: Original strand, 37241598 - 37241640
Alignment:
Q  19 aattcaccttaaagtagttgaattccctcaaaacattacattc 61  Q
    |||||| || |||||| ||||||||||||||||||||||||||    
T  37241598 aattcagctcaaagtatttgaattccctcaaaacattacattc 37241640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 54
Target Start/End: Original strand, 17492634 - 17492679
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacat 54  Q
    |||||||| |||||||||| ||| || |||||||||||||||||||    
T  17492634 caaacaatggaattcacctcaaattatttgaattccctcaaaacat 17492679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 37090365 - 37090301
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatt 73  Q
    |||||||| |||||||| | ||| || ||||||| |||||||||||  |||| ||||||||||||    
T  37090365 caaacaatggaattcacataaaaatatttgaatttcctcaaaacatcgcattacctcaaaacatt 37090301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 79; Significance: 6e-37; HSPs: 57)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 3 - 93
Target Start/End: Complemental strand, 36455997 - 36455907
Alignment:
Q  3 tgaattcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| |||||    
T  36455997 tgaattcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattagattccctcaaaacattcccccatccaaacacactct 36455907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 28845963 - 28845877
Alignment:
Q  1 gttgaattcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| | |||||||||||    
T  28845963 gttgaattcaaacaatagaattcaccttaaagtagttgaattccctcgaaacattacattccctcaaaacattcctccatccaaaca 28845877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 2 - 87
Target Start/End: Complemental strand, 7352903 - 7352818
Alignment:
Q  2 ttgaattcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    |||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||| |||||||||||||    
T  7352903 ttgaattcaaacaatagaattcaccttaaaatagttgaattccatcaaaacattacattccctcaaaacattcccccatccaaaca 7352818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 6 - 93
Target Start/End: Original strand, 15660255 - 15660342
Alignment:
Q  6 attcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| || |||||||||| |||||    
T  15660255 attcaaacaatagaattcagctcaaagtagttgaattccctcaaaacattacattccctcaaaacattccctcatccaaacacactct 15660342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 3 - 85
Target Start/End: Original strand, 1107121 - 1107203
Alignment:
Q  3 tgaattcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaa 85  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||| ||| |||||||||||    
T  1107121 tgaattcaaacaatagaattcaccttagagtagttgaattccctcaaaacattatattccctcaaaatattcccccatccaaa 1107203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 857331 - 857266
Alignment:
Q  1 gttgaattcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctca 66  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  857331 gttgaattcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctca 857266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 29 - 98
Target Start/End: Original strand, 7352907 - 7352976
Alignment:
Q  29 aaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttagga 98  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  7352907 aaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacacactcttagga 7352976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 19 - 103
Target Start/End: Complemental strand, 1112679 - 1112595
Alignment:
Q  19 aattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttaggattttt 103  Q
    ||||||||| ||||||||||||||||||| |||||||||||| |||||||||||| ||||||||||||| |||||||||||||||    
T  1112679 aattcacctcaaagtagttgaattccctcgaaacattacatttcctcaaaacattcccccatccaaacacactcttaggattttt 1112595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 857323 - 857398
Alignment:
Q  18 gaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  857323 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacacactct 857398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 6 - 85
Target Start/End: Original strand, 10128046 - 10128125
Alignment:
Q  6 attcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaa 85  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  10128046 attcaaacaatagaattcatctcaaagtagttgaattccctcaaaacattacattctctcaaaacattcccccatccaaa 10128125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 4896716 - 4896794
Alignment:
Q  18 gaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttag 96  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||    
T  4896716 gaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaatatttccccatccaaacacactattag 4896794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 3 - 93
Target Start/End: Complemental strand, 14982369 - 14982280
Alignment:
Q  3 tgaattcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    |||||||||| |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| | ||||||||||| |||||    
T  14982369 tgaattcaaa-aataaaattcaccttaaagtagttaaattccctcaaaacattacattccctcaaaacattcctccatccaaacacactct 14982280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 15 - 96
Target Start/End: Original strand, 36456007 - 36456088
Alignment:
Q  15 atagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttag 96  Q
    |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| | ||||||||||| ||||||||    
T  36456007 atagaattcaccttaaagtagttgaatttcctcaaaatattacattccctcaaaacattcctccatccaaacacactcttag 36456088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 42844630 - 42844541
Alignment:
Q  6 attcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactctta 95  Q
    |||||||||||||||||||||| |||||||||||||||| |||||| ||||||||||||||||||||| ||||||| | ||| |||||||    
T  42844630 attcaaacaatagaattcacctcaaagtagttgaattccttcaaaatattacattccctcaaaacattcccccatctatacacactctta 42844541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 9 - 93
Target Start/End: Complemental strand, 31473933 - 31473849
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    ||||||||| ||||||||| |||||| ||||||||||||| |||||||||||||||||||||||| ||||||||||||| |||||    
T  31473933 caaacaataaaattcacctcaaagtatttgaattccctcataacattacattccctcaaaacattcccccatccaaacacactct 31473849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 28845955 - 28846030
Alignment:
Q  18 gaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    ||||||| || |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||    
T  28845955 gaattcaactcaaagtagttgaattccctcaaaacattatattccctcaaaacatttccccatccaaacacactct 28846030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 49111396 - 49111471
Alignment:
Q  18 gaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||    
T  49111396 gaattcacctcaaaatagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactct 49111471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 9 - 87
Target Start/End: Complemental strand, 10633116 - 10633038
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    ||||||||  ||||||||| |||||| ||||||||||||| |||||||||||||||||||||||| |||||||||||||    
T  10633116 caaacaatgaaattcacctcaaagtatttgaattccctcataacattacattccctcaaaacattcccccatccaaaca 10633038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 9 - 85
Target Start/End: Complemental strand, 1539725 - 1539649
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaa 85  Q
    ||||||||  ||||||||| |||||| |||||||||||||||||||||||||||||||||||||| | |||||||||    
T  1539725 caaacaatgaaattcacctcaaagtatttgaattccctcaaaacattacattccctcaaaacattcctccatccaaa 1539649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 9 - 93
Target Start/End: Complemental strand, 2125941 - 2125857
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    |||||||| |||||||||  |||||| |||||||||||||||||| ||||||||||||||| ||| ||||||||||||| |||||    
T  2125941 caaacaatggaattcaccccaaagtatttgaattccctcaaaacaatacattccctcaaaatattcccccatccaaacacactct 2125857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 9 - 93
Target Start/End: Complemental strand, 35470206 - 35470122
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    |||||||| |||||||||  |||||| |||||||||||||||||| ||||||||||||||||||||| ||||| ||||| |||||    
T  35470206 caaacaatggaattcaccccaaagtatttgaattccctcaaaacaatacattccctcaaaacatttcaccatctaaacacactct 35470122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 9 - 95
Target Start/End: Complemental strand, 41139557 - 41139473
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactctta 95  Q
    ||||||||||||||||||| |||||| ||||||| ||||||||||||||||| ||||||| |  ||||||||||||||| |||||||    
T  41139557 caaacaatagaattcacctaaaagtatttgaatttcctcaaaacattacattacctcaaagc--ttccccatccaaacacactctta 41139473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 3 - 93
Target Start/End: Complemental strand, 41498580 - 41498489
Alignment:
Q  3 tgaattcaaacaatagaattcaccttaaagtagttgaattccctc-aaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    |||||| |||||||||||||||||||||||| ||||||||||||| |||||||||  ||| ||||||||| | ||||||||||||| |||||    
T  41498580 tgaatttaaacaatagaattcaccttaaagtggttgaattccctcaaaaacattattttctctcaaaacaatcccccatccaaacacactct 41498489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 11 - 93
Target Start/End: Original strand, 55266852 - 55266934
Alignment:
Q  11 aacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    ||||||| ||||||||||||||||||||||||||||||||| |||| ||| ||||||||||||   ||||||||||| |||||    
T  55266852 aacaataaaattcaccttaaagtagttgaattccctcaaaatattatatttcctcaaaacattcatccatccaaacacactct 55266934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 93
Target Start/End: Original strand, 1112704 - 1112781
Alignment:
Q  16 tagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    |||||||||||| ||||||||||||||||||| ||||||||||||  ||||||||||  ||||||||||||| |||||    
T  1112704 tagaattcacctcaaagtagttgaattccctcgaaacattacatttgctcaaaacatccccccatccaaacaaactct 1112781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 93
Target Start/End: Complemental strand, 11041040 - 11040968
Alignment:
Q  20 attcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||||||| | ||||||||||||||| |||||    
T  11041040 attcacctcaaagtagttgaattctctcaaaacattacattccctcaaaata-ttccccatccaaacacactct 11040968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 18 - 98
Target Start/End: Complemental strand, 1107127 - 1107046
Alignment:
Q  18 gaattcaccttaaagtagttgaattccctcaaaacattacattccc-tcaaaacatttccccatccaaacagactcttagga 98  Q
    ||||||| || |||||||||||||||| |||||||||||||||||| | |||| |||||| |||||||||| ||||||||||    
T  1107127 gaattcatctcaaagtagttgaattccttcaaaacattacattcccttaaaaaaatttcctcatccaaacacactcttagga 1107046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 35 - 92
Target Start/End: Complemental strand, 4441395 - 4441338
Alignment:
Q  35 gttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactc 92  Q
    ||||||||||||||||||||||||||||||||||||||| | ||||||||||| ||||    
T  4441395 gttgaattccctcaaaacattacattccctcaaaacattccaccatccaaacacactc 4441338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 24 - 85
Target Start/End: Original strand, 11348327 - 11348388
Alignment:
Q  24 accttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaa 85  Q
    |||| ||||| |||||||||||||||||||||||||||||| |||||||| |||||||||||    
T  11348327 acctcaaagttgttgaattccctcaaaacattacattcccttaaaacattcccccatccaaa 11348388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 9 - 66
Target Start/End: Complemental strand, 29091221 - 29091164
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctca 66  Q
    ||||||||||||||||| | |||||| |||||||||||||||||||||||||||||||    
T  29091221 caaacaatagaattcacatcaaagtatttgaattccctcaaaacattacattccctca 29091164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 11041036 - 11041088
Alignment:
Q  3 tgaattcaaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 55  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||||||    
T  11041036 tgaatccaaacaatagaattcaccataaagtagttgaattccctcaaaacatt 11041088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 9 - 93
Target Start/End: Complemental strand, 16516255 - 16516171
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    |||||||| || ||||| | |||||| || |||||| ||||||||||||||||| |||||||||| ||||||||||||| |||||    
T  16516255 caaacaatggagttcacatcaaagtatttaaattccttcaaaacattacattccgtcaaaacattcccccatccaaacacactct 16516171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 41498575 - 41498651
Alignment:
Q  19 aattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactctta 95  Q
    ||||||||| ||| || ||||||||| |||||||||||||||||||||||| ||| | ||||||||||| |||||||    
T  41498575 aattcacctcaaaataattgaattccttcaaaacattacattccctcaaaatattcctccatccaaacacactctta 41498651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 36 - 93
Target Start/End: Complemental strand, 4896705 - 4896648
Alignment:
Q  36 ttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    ||||||||||||||||||||||||| |||||||| ||| ||||||||||||| |||||    
T  4896705 ttgaattccctcaaaacattacattacctcaaaatattcccccatccaaacacactct 4896648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 6 - 55
Target Start/End: Original strand, 26250981 - 26251030
Alignment:
Q  6 attcaaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 55  Q
    ||||||| |||||||||||||| |||||||||||||||||||||||||||    
T  26250981 attcaaataatagaattcacctcaaagtagttgaattccctcaaaacatt 26251030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 12914067 - 12914119
Alignment:
Q  3 tgaattcaaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 55  Q
    ||||||||||||||| |||||| |||||| |||||||||||||||||||||||    
T  12914067 tgaattcaaacaataaaattcatcttaaaatagttgaattccctcaaaacatt 12914119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 15660240 - 15660180
Alignment:
Q  36 ttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttag 96  Q
    ||||||||||||||||||||||||| |||||||| ||| ||| ||||||||| ||||||||    
T  15660240 ttgaattccctcaaaacattacattacctcaaaatattcccctatccaaacacactcttag 15660180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 36 - 87
Target Start/End: Original strand, 42844645 - 42844696
Alignment:
Q  36 ttgaattccctcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    |||| |||||||||||||||||||| |||||||| |||||||||||||||||    
T  42844645 ttgatttccctcaaaacattacattacctcaaaatatttccccatccaaaca 42844696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 7 - 73
Target Start/End: Complemental strand, 12169104 - 12169039
Alignment:
Q  7 ttcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatt 73  Q
    ||||||||| ||||||||| ||||| |||||||||| | |||||||||||| |||||||||||||||    
T  12169104 ttcaaacaacagaattcactttaaaatagttgaatttc-tcaaaacattactttccctcaaaacatt 12169039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 9 - 63
Target Start/End: Complemental strand, 26534577 - 26534523
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccc 63  Q
    |||||||||||||||||   |||||| ||||||||||||||||||||||||||||    
T  26534577 caaacaatagaattcacaacaaagtatttgaattccctcaaaacattacattccc 26534523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 44 - 94
Target Start/End: Original strand, 31742874 - 31742924
Alignment:
Q  44 cctcaaaacattacattccctcaaaacatttccccatccaaacagactctt 94  Q
    |||||||||||||||||||||||||||||| | ||||||||||| ||||||    
T  31742874 cctcaaaacattacattccctcaaaacattcctccatccaaacacactctt 31742924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 29 - 93
Target Start/End: Complemental strand, 5715808 - 5715744
Alignment:
Q  29 aaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    |||||| ||||||| |||||||||||||||||  ||||||||||| || |||||||||| |||||    
T  5715808 aaagtatttgaattacctcaaaacattacattatctcaaaacattccctcatccaaacacactct 5715744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 9 - 85
Target Start/End: Original strand, 19461725 - 19461801
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaa 85  Q
    |||||||||||||| |  | ||| || |||||||| |||||||||||||||| | |||||| |||||||||||||||    
T  19461725 caaacaatagaatttatatcaaattatttgaattcgctcaaaacattacattacttcaaaatatttccccatccaaa 19461801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 467887 - 467960
Alignment:
Q  18 gaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    |||||||| | ||||| |||||||||| ||||||||||||||||| |||||||| ||| ||||||||||| |||||    
T  467887 gaattcacttcaaagtggttgaattcc-tcaaaacattacattccatcaaaaca-ttctccatccaaacacactct 467960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 97
Target Start/End: Complemental strand, 26250984 - 26250905
Alignment:
Q  18 gaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttagg 97  Q
    |||| ||||| ||| || ||||||| ||||||||||||||||| |||||||| ||| || |||||||||| ||| |||||    
T  26250984 gaatccacctcaaaataattgaatttcctcaaaacattacattacctcaaaatattccctcatccaaacacactattagg 26250905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 55
Target Start/End: Complemental strand, 42775689 - 42775643
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 55  Q
    |||||||| |||||||||| |||||| ||||||||||||||||||||    
T  42775689 caaacaatggaattcacctcaaagtatttgaattccctcaaaacatt 42775643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 95
Target Start/End: Complemental strand, 42776721 - 42776635
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactctta 95  Q
    ||||||||  ||||||||| |||||| |||||||  |||||||||||||||  ||| ||||||||   ||||||||||| |||||||    
T  42776721 caaacaatgaaattcacctaaaagtatttgaatttactcaaaacattacataacctaaaaacattcttccatccaaacacactctta 42776635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 87
Target Start/End: Complemental strand, 10128049 - 10127980
Alignment:
Q  18 gaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    |||| ||||| ||| || ||||||||| ||||||||||||||| | |||||| ||| |||||||||||||    
T  10128049 gaatccacctcaaaataattgaattccttcaaaacattacattacttcaaaatattcccccatccaaaca 10127980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 46 - 87
Target Start/End: Original strand, 42542979 - 42543020
Alignment:
Q  46 tcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    |||||||||||||||||||||||||||| | |||||||||||    
T  42542979 tcaaaacattacattccctcaaaacattccaccatccaaaca 42543020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 95
Target Start/End: Complemental strand, 31947675 - 31947588
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattaca---ttccctcaaaacatttccccatccaaacagactctta 95  Q
    |||||||| |||||||||| |  ||| ||||||||||||  |||||||||   |||||||||||||||  |||||||||||| |||||||    
T  31947675 caaacaatggaattcacctca--gtatttgaattccctcgtaacattacaatattccctcaaaacattctcccatccaaacatactctta 31947588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 46242533 - 46242597
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatt 73  Q
    |||||||| |||||||||| |||||| ||  ||||| ||||||||||| ||| ||||||||||||    
T  46242533 caaacaatggaattcacctcaaagtattttgattccttcaaaacattatatttcctcaaaacatt 46242597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 95
Target Start/End: Complemental strand, 52493998 - 52493924
Alignment:
Q  19 aattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactctta 95  Q
    ||||||||| ||| || || |||||||||||| ||||||||| | |||||||||| ||||||||||||| |||||||    
T  52493998 aattcacctaaaaatattttaattccctcaaa-cattacattacttcaaaacatt-ccccatccaaacacactctta 52493924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 10 - 61
Target Start/End: Original strand, 16300209 - 16300260
Alignment:
Q  10 aaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattc 61  Q
    ||||||| |||||||||| |||||| |||||||  |||||||||||||||||    
T  16300209 aaacaatggaattcacctcaaagtatttgaattttctcaaaacattacattc 16300260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 87
Target Start/End: Original strand, 9451121 - 9451199
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    ||||||||| |||| | || |||||| ||||| || |||||||||||||||| ||| |||||||| |  ||||||||||    
T  9451121 caaacaataaaatttagctaaaagtatttgaactctctcaaaacattacattaccttaaaacattccttcatccaaaca 9451199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 55
Target Start/End: Original strand, 53760779 - 53760825
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 55  Q
    ||||||||||||||||| | ||| || ||||||||||||||||||||    
T  53760779 caaacaatagaattcacatcaaaatatttgaattccctcaaaacatt 53760825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 4441412 - 4441449
Alignment:
Q  18 gaattcaccttaaagtagttgaattccctcaaaacatt 55  Q
    |||||||||| |||||||||||||| ||||||||||||    
T  4441412 gaattcacctcaaagtagttgaatttcctcaaaacatt 4441449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 14982363 - 14982396
Alignment:
Q  18 gaattcaccttaaagtagttgaattccctcaaaa 51  Q
    |||||||||| |||||||||||||||||||||||    
T  14982363 gaattcacctcaaagtagttgaattccctcaaaa 14982396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 79; Significance: 6e-37; HSPs: 64)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 3 - 97
Target Start/End: Complemental strand, 44436348 - 44436254
Alignment:
Q  3 tgaattcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttagg 97  Q
    ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  44436348 tgaattcaaacaatagaattcaccttaaaatagttgaatttcctcaaaacattacattccctcaaaacattcccccatccaaacacactcttagg 44436254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 3 - 93
Target Start/End: Complemental strand, 44692912 - 44692822
Alignment:
Q  3 tgaattcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| ||||||||||||| |||||    
T  44692912 tgaattcaaacaatagaattcaccttaaagtggttgaattccctcaaaacattactttccctcaaaacattcccccatccaaacacactct 44692822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 13 - 103
Target Start/End: Complemental strand, 49457423 - 49457333
Alignment:
Q  13 caatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttaggattttt 103  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| ||||    
T  49457423 caatagaattcaccttaaagtggttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactcttaggaatttt 49457333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 6 - 85
Target Start/End: Complemental strand, 31070493 - 31070415
Alignment:
Q  6 attcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaa 85  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  31070493 attcaaacaatagaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaaca-ttccccatccaaa 31070415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 18 - 111
Target Start/End: Original strand, 44692906 - 44692999
Alignment:
Q  18 gaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttaggatttttctaaaata 111  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| ||||||||| ||| | |||||||    
T  44692906 gaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcctccatccaaacacactcttagggtttctttaaaata 44692999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 9 - 93
Target Start/End: Original strand, 5415858 - 5415942
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| ||| ||||||||||||| |||||    
T  5415858 caaacaatagaattcaccttaaagtagttgaattccatcaaaacattactttccctcaaaatattcccccatccaaacacactct 5415942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 3 - 95
Target Start/End: Complemental strand, 9129434 - 9129342
Alignment:
Q  3 tgaattcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactctta 95  Q
    |||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| | |  |||||||||||| |||||||    
T  9129434 tgaattcaaacaatagaattcaacttaaagtagttgaattccatcaaaacattacattccctcaaaatagtctcccatccaaacacactctta 9129342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 3 - 95
Target Start/End: Complemental strand, 9137541 - 9137449
Alignment:
Q  3 tgaattcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactctta 95  Q
    |||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| | |  |||||||||||| |||||||    
T  9137541 tgaattcaaacaatagaattcaacttaaagtagttgaattccatcaaaacattacattccctcaaaatagtctcccatccaaacacactctta 9137449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 17 - 93
Target Start/End: Original strand, 46672799 - 46672875
Alignment:
Q  17 agaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||    
T  46672799 agaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactct 46672875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 18 - 97
Target Start/End: Original strand, 27251978 - 27252057
Alignment:
Q  18 gaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttagg 97  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||||    
T  27251978 gaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacatccccccatccaaacacactcttagg 27252057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 9129428 - 9129505
Alignment:
Q  18 gaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactctta 95  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| || |||||||||| |||||||    
T  9129428 gaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattccctcatccaaacacactctta 9129505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 9137535 - 9137612
Alignment:
Q  18 gaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactctta 95  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| || |||||||||| |||||||    
T  9137535 gaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattccctcatccaaacacactctta 9137612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 9 - 87
Target Start/End: Original strand, 21307520 - 21307598
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    |||||||| |||||||||| |||||| |||||||||||||||||||||||||||| ||||||||| |||||||||||||    
T  21307520 caaacaatggaattcacctcaaagtatttgaattccctcaaaacattacattcccgcaaaacattcccccatccaaaca 21307598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 96
Target Start/End: Complemental strand, 34088653 - 34088568
Alignment:
Q  11 aacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttag 96  Q
    |||||| |||||||||  |||||| |||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||||||    
T  34088653 aacaatggaattcaccccaaagtatttgaattccctcaaaacaatacattccctcaaaacatttctccatccaaacacactcttag 34088568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 22 - 94
Target Start/End: Complemental strand, 5415854 - 5415782
Alignment:
Q  22 tcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactctt 94  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| ||||||||| ||||||    
T  5415854 tcaccttaaagtagttgaattccctcaaaacattacattccctcaaaatattcccctatccaaacacactctt 5415782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 11 - 93
Target Start/End: Original strand, 36397979 - 36398061
Alignment:
Q  11 aacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    |||||| |||||||||  |||||| |||||||||||||||||| ||||||||||||||||||| ||||||||||||| |||||    
T  36397979 aacaatggaattcaccccaaagtatttgaattccctcaaaacaatacattccctcaaaacattcccccatccaaacacactct 36398061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 9 - 97
Target Start/End: Original strand, 42005941 - 42006029
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttagg 97  Q
    ||||||||  ||||||||| || ||| || |||||| |||||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  42005941 caaacaatgaaattcacctcaaggtatttaaattccttcaaaacattacattccctcaaaacattcccccatccaaacacactcttagg 42006029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 9 - 93
Target Start/End: Complemental strand, 47767516 - 47767432
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    ||||||||  ||||||||| || ||| ||||||||| |||||||||||||||||||||||||||| ||||||||||||| |||||    
T  47767516 caaacaatgtaattcacctcaaggtatttgaattccttcaaaacattacattccctcaaaacattcccccatccaaacacactct 47767432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 28092289 - 28092214
Alignment:
Q  18 gaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    |||||||||| |||||| ||||||||||||||||||| ||||| |||||||||||| ||||||||||||| |||||    
T  28092289 gaattcacctcaaagtaattgaattccctcaaaacatcacatttcctcaaaacattcccccatccaaacatactct 28092214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 9 - 96
Target Start/End: Original strand, 53129831 - 53129918
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttag 96  Q
    |||||||| |||||||||  |||||| ||||||||||| |||||||||||||||||| ||||||| || |||||||||| ||||||||    
T  53129831 caaacaatggaattcaccccaaagtatttgaattcccttaaaacattacattccctcgaaacattccctcatccaaacacactcttag 53129918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 6 - 55
Target Start/End: Complemental strand, 46429483 - 46429434
Alignment:
Q  6 attcaaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 55  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46429483 attcaaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 46429434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 9 - 85
Target Start/End: Complemental strand, 19475900 - 19475824
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaa 85  Q
    |||||||| |||||||||| |||||| ||||||| ||||| |||||||||||||||||||||||| | |||||||||    
T  19475900 caaacaatggaattcacctcaaagtatttgaattacctcataacattacattccctcaaaacattcctccatccaaa 19475824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 9 - 93
Target Start/End: Complemental strand, 37054478 - 37054394
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    ||||||||  ||||||||| || ||| ||||||||| ||||||||||||||||||| |||||||| ||||||||||||| |||||    
T  37054478 caaacaatgaaattcacctcaaggtatttgaattccttcaaaacattacattcccttaaaacattcccccatccaaacacactct 37054394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 9 - 93
Target Start/End: Original strand, 53470417 - 53470501
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    ||||||||  ||||||||  |||||| |||||||||||||||||| || ||||||||||||||||||| |||||||||| |||||    
T  53470417 caaacaatgaaattcaccccaaagtatttgaattccctcaaaacaatagattccctcaaaacatttcctcatccaaacacactct 53470501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 9 - 96
Target Start/End: Original strand, 671607 - 671694
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttag 96  Q
    |||||||| |||||||||  ||||||  ||||||||||||||||| ||||||||||||||||||| ||| ||||||| | ||||||||    
T  671607 caaacaatggaattcaccccaaagtatctgaattccctcaaaacaatacattccctcaaaacattcccctatccaaaaacactcttag 671694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 85
Target Start/End: Complemental strand, 37321625 - 37321558
Alignment:
Q  18 gaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaa 85  Q
    ||||||||||||||||||||||||| |||||||||||||| || |||||||| ||| |||||||||||    
T  37321625 gaattcaccttaaagtagttgaatttcctcaaaacattacttttcctcaaaatattcccccatccaaa 37321558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 39110469 - 39110394
Alignment:
Q  18 gaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    ||||||| || ||||||||||||||||| ||||||||||||||| |||||||||||||  |||||||||| |||||    
T  39110469 gaattcaactcaaagtagttgaattcccacaaaacattacattcgctcaaaacatttcttcatccaaacacactct 39110394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 9 - 95
Target Start/End: Complemental strand, 7302430 - 7302344
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactctta 95  Q
    |||||||| |||||||||| || |||  |||||||| |||||||||||||||| ||||||||||| || |||||||||| |||||||    
T  7302430 caaacaatggaattcacctcaaggtatctgaattccttcaaaacattacattctctcaaaacattccctcatccaaacacactctta 7302344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 10 - 55
Target Start/End: Original strand, 332051 - 332096
Alignment:
Q  10 aaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 55  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  332051 aaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 332096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 27251984 - 27251932
Alignment:
Q  3 tgaattcaaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 55  Q
    |||||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  27251984 tgaattcaaacaatagaattcaacttaaagtagttgaattcccttaaaacatt 27251932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 30766637 - 30766573
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatt 73  Q
    |||||||| |||||||||| || ||| ||||||||| ||||||||||||||||||||||||||||    
T  30766637 caaacaatggaattcacctcaaggtatttgaattccttcaaaacattacattccctcaaaacatt 30766573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 39 - 99
Target Start/End: Original strand, 35279920 - 35279980
Alignment:
Q  39 aattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttaggat 99  Q
    ||||| ||||||||||||||||||||||||||||| ||||||||||||| | |||||||||    
T  35279920 aattcactcaaaacattacattccctcaaaacattcccccatccaaacacattcttaggat 35279980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 9 - 93
Target Start/End: Complemental strand, 48947689 - 48947605
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    |||||||| |||||||||  |||||| |||||||| ||||||||| |||||||||||||||||||   ||||||||||| |||||    
T  48947689 caaacaatggaattcaccccaaagtatttgaattctctcaaaacaatacattccctcaaaacattcttccatccaaacacactct 48947605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 25655364 - 25655418
Alignment:
Q  1 gttgaattcaaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 55  Q
    |||||||||||| ||||||||||| ||||||||||||||||||| ||||||||||    
T  25655364 gttgaattcaaataatagaattcaacttaaagtagttgaattccgtcaaaacatt 25655418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 9 - 101
Target Start/End: Complemental strand, 7976632 - 7976539
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatc-caaacagactcttaggattt 101  Q
    ||||||||||||||||||| || ||| || |||||| ||||||||||||||||| ||||||||||  | ||||  ||||| |||||||||||||    
T  7976632 caaacaatagaattcacctcaatgtatttaaattccttcaaaacattacattccttcaaaacattctctcatctaaaacacactcttaggattt 7976539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 9 - 85
Target Start/End: Complemental strand, 30767189 - 30767112
Alignment:
Q  9 caaacaatagaattcacctta-aagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaa 85  Q
    |||||||| |||||||||||  ||||| ||||||||| ||| ||||||| |||||||||||||||| |||||||||||    
T  30767189 caaacaatggaattcaccttttaagtatttgaattccttcataacattagattccctcaaaacattaccccatccaaa 30767112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 3 - 96
Target Start/End: Complemental strand, 40929697 - 40929605
Alignment:
Q  3 tgaattcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttag 96  Q
    ||||||||||||||||||||||  ||||| ||||||||||  |||  ||||||| |||| || |||||| ||||||||||||||| ||||||||    
T  40929697 tgaattcaaacaatagaattcatattaaaatagttgaattttctccgaacattatattctctgaaaaca-ttccccatccaaacacactcttag 40929605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 28092283 - 28092335
Alignment:
Q  3 tgaattcaaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 55  Q
    ||||||||||||||||||||||||| |||  ||||||||||||||||||||||    
T  28092283 tgaattcaaacaatagaattcacctcaaaacagttgaattccctcaaaacatt 28092335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 44436342 - 44436384
Alignment:
Q  18 gaattcaccttaaagtagttgaattccctcaaaacattacatt 60  Q
    |||||||||| ||||||||||||||||||||||||||||||||    
T  44436342 gaattcacctcaaagtagttgaattccctcaaaacattacatt 44436384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 9 - 87
Target Start/End: Complemental strand, 52527120 - 52527042
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    |||||||| ||||| |||| |||||| |||||||||  || |||||||||| || |||||||||| |||||||||||||    
T  52527120 caaacaatggaatttacctcaaagtatttgaattcctccataacattacatcccttcaaaacattcccccatccaaaca 52527042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 24 - 93
Target Start/End: Complemental strand, 46635926 - 46635857
Alignment:
Q  24 accttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    |||| |||||| ||||||| |||||||||||||||||  |||||||||||| | |||||||||| |||||    
T  46635926 acctaaaagtatttgaatttcctcaaaacattacattagctcaaaacattttctcatccaaacacactct 46635857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 47284313 - 47284268
Alignment:
Q  6 attcaaacaatagaattcaccttaaagtagttgaattccctcaaaa 51  Q
    |||||||||||||||||||||| ||||||| |||||||||||||||    
T  47284313 attcaaacaatagaattcacctcaaagtagctgaattccctcaaaa 47284268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 31189385 - 31189449
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatt 73  Q
    ||||| ||| |||| |||| |||||| |||||||| |||||||||||||||| ||||||||||||    
T  31189385 caaacgataaaatttacctcaaagtatttgaattctctcaaaacattacattacctcaaaacatt 31189449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 37 - 96
Target Start/End: Complemental strand, 46001420 - 46001361
Alignment:
Q  37 tgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttag 96  Q
    ||||||||||| |||||||||||| |||||||| ||| | ||||||||||| ||||||||    
T  46001420 tgaattccctcgaaacattacattacctcaaaatattccgccatccaaacacactcttag 46001361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 46429480 - 46429555
Alignment:
Q  18 gaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    |||| ||||| ||| || ||||||||| ||||||||||||||| |||||||| ||| || |||||||||| |||||    
T  46429480 gaatccacctcaaaataattgaattccttcaaaacattacattacctcaaaatattccctcatccaaacacactct 46429555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 59
Target Start/End: Original strand, 13176550 - 13176600
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacat 59  Q
    ||||||||||||| ||||| |||||  ||||||||||||||||||||||||    
T  13176550 caaacaatagaatccacctaaaagtctttgaattccctcaaaacattacat 13176600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 87
Target Start/End: Original strand, 44288467 - 44288525
Alignment:
Q  29 aaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    |||||| ||||||||| ||||||||||| ||| |||||||||||| | |||||||||||    
T  44288467 aaagtatttgaattccatcaaaacattatattacctcaaaacattcctccatccaaaca 44288525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 83
Target Start/End: Complemental strand, 47336965 - 47336891
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatcca 83  Q
    |||||||| |||||||||| ||  || || ||||  |||||||||||||||| ||| ||||||||||||||||||    
T  47336965 caaacaatggaattcacctaaacatatttaaattatctcaaaacattacattaccttaaaacatttccccatcca 47336891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 332049 - 332012
Alignment:
Q  18 gaattcaccttaaagtagttgaattccctcaaaacatt 55  Q
    |||||||||| |||||||||||||||||||||||||||    
T  332049 gaattcacctcaaagtagttgaattccctcaaaacatt 332012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 55
Target Start/End: Original strand, 38506861 - 38506910
Alignment:
Q  6 attcaaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 55  Q
    ||||||||||| |||||||||| ||| || ||||||||||||||||||||    
T  38506861 attcaaacaatggaattcacctcaaattatttgaattccctcaaaacatt 38506910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 97
Target Start/End: Complemental strand, 42130749 - 42130688
Alignment:
Q  36 ttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttagg 97  Q
    ||||||||||||||||||||||||  |||||||| ||| ||||| ||||||| ||| |||||    
T  42130749 ttgaattccctcaaaacattacatcacctcaaaatattcccccacccaaacacactattagg 42130688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 63
Target Start/End: Original strand, 42130764 - 42130821
Alignment:
Q  6 attcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccc 63  Q
    ||||||| | |||||||||||| |||||| ||||||||||| |||| |||||||||||    
T  42130764 attcaaagagtagaattcacctcaaagtaattgaattccctaaaaagattacattccc 42130821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 93
Target Start/End: Original strand, 47284328 - 47284385
Alignment:
Q  36 ttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    ||||||||||||||||||||||||| |||||||| |||  | |||||||||| |||||    
T  47284328 ttgaattccctcaaaacattacattacctcaaaatattctctcatccaaacacactct 47284385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 93
Target Start/End: Complemental strand, 2732683 - 2732639
Alignment:
Q  49 aaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    |||||||| ||| |||||||||||||||||||||||||| |||||    
T  2732683 aaacattatattacctcaaaacatttccccatccaaacacactct 2732639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 50168598 - 50168662
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatt 73  Q
    |||||||| ||||||| || ||| || |||| || ||||||||||||||||| ||||||||||||    
T  50168598 caaacaatggaattcagctaaaattatttgagtttcctcaaaacattacattacctcaaaacatt 50168662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 9 - 60
Target Start/End: Complemental strand, 8762210 - 8762159
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacatt 60  Q
    |||||||| |||||||| | |||||| ||||||||||||| |||||||||||    
T  8762210 caaacaatggaattcacatcaaagtatttgaattccctcataacattacatt 8762159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 58 - 93
Target Start/End: Complemental strand, 25655350 - 25655315
Alignment:
Q  58 attccctcaaaacatttccccatccaaacagactct 93  Q
    |||||||||||||||||||||||||||||| |||||    
T  25655350 attccctcaaaacatttccccatccaaacacactct 25655315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 69
Target Start/End: Original strand, 31070490 - 31070541
Alignment:
Q  18 gaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaa 69  Q
    |||| ||||| ||| || ||||||||||||||||||||||||| ||||||||    
T  31070490 gaatccacctcaaaataattgaattccctcaaaacattacattacctcaaaa 31070541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 55
Target Start/End: Complemental strand, 2104818 - 2104772
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 55  Q
    ||||||||||||||||| | |||||| |||||||||||| |||||||    
T  2104818 caaacaatagaattcacatcaaagtatttgaattccctcgaaacatt 2104772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 59
Target Start/End: Original strand, 13339451 - 13339501
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacat 59  Q
    ||||||||||||| ||||| |||||  |||||||| |||||||||||||||    
T  13339451 caaacaatagaatccacctaaaagtctttgaattctctcaaaacattacat 13339501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 58 - 96
Target Start/End: Original strand, 25655403 - 25655441
Alignment:
Q  58 attccctcaaaacatttccccatccaaacagactcttag 96  Q
    ||||| |||||||||||||||||||||||| ||||||||    
T  25655403 attccgtcaaaacatttccccatccaaacacactcttag 25655441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 25655372 - 25655335
Alignment:
Q  18 gaattcaccttaaagtagttgaattccctcaaaacatt 55  Q
    ||||||| || |||||||||||||||||||||||||||    
T  25655372 gaattcaactcaaagtagttgaattccctcaaaacatt 25655335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 39215925 - 39215880
Alignment:
Q  6 attcaaacaatagaattcaccttaaagtagttgaattccctcaaaa 51  Q
    |||||||||||| ||||||||| |||||| ||||||||||| ||||    
T  39215925 attcaaacaataaaattcacctcaaagtaattgaattccctaaaaa 39215880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 67
Target Start/End: Complemental strand, 19475971 - 19475923
Alignment:
Q  19 aattcaccttaaagtagttgaattccctcaaaacattacattccctcaa 67  Q
    |||| |||| |||||| ||||||||||||| ||||||||||| ||||||    
T  19475971 aatttacctcaaagtatttgaattccctcataacattacatttcctcaa 19475923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 78; Significance: 2e-36; HSPs: 55)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 10 - 95
Target Start/End: Complemental strand, 40110820 - 40110735
Alignment:
Q  10 aaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactctta 95  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||    
T  40110820 aaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactctta 40110735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 43955596 - 43955514
Alignment:
Q  14 aatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttag 96  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||    
T  43955596 aatagaattcatcttaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactcttag 43955514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 7 - 96
Target Start/End: Complemental strand, 5644763 - 5644674
Alignment:
Q  7 ttcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttag 96  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| | |||| |||||| ||||||||    
T  5644763 ttcaaacaatagaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcctccattcaaacacactcttag 5644674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 29065906 - 29065817
Alignment:
Q  6 attcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactctta 95  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||   ||||||||||| |||||||    
T  29065906 attcaaacaatagaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcatccatccaaacacactctta 29065817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 6 - 101
Target Start/End: Complemental strand, 31632809 - 31632714
Alignment:
Q  6 attcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttaggattt 101  Q
    ||||||||||| |||||||||| |||||| ||||||||||||| |||||||||||||||||||||||| ||||||||||||| |||||||| ||||    
T  31632809 attcaaacaatggaattcacctcaaagtatttgaattccctcataacattacattccctcaaaacattcccccatccaaacacactcttagaattt 31632714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 18 - 97
Target Start/End: Original strand, 40110822 - 40110901
Alignment:
Q  18 gaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttagg 97  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||    
T  40110822 gaattcacctcaaagtagttgaattccctcaaaacattacattccctcgaaacatttccccatccaaacacactcttagg 40110901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 6 - 87
Target Start/End: Original strand, 21635957 - 21636038
Alignment:
Q  6 attcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    ||||||||||||||||||| || ||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||    
T  21635957 attcaaacaatagaattcatctcaaagtagttaaattccttcaaaacattacattccctcaaaacatttccccatccaaaca 21636038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 16 - 87
Target Start/End: Original strand, 43955596 - 43955667
Alignment:
Q  16 tagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  43955596 tagaatgcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaaca 43955667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 7 - 93
Target Start/End: Original strand, 2057468 - 2057554
Alignment:
Q  7 ttcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    ||||||||||| |||||||||| |||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||||| |||||    
T  2057468 ttcaaacaataaaattcaccttgaagtagttgaattccctcaaaacattactttccctcaaaatattcccccatccaaacacactct 2057554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 49052852 - 49052935
Alignment:
Q  1 gttgaattcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| |||||||||||||||    
T  49052852 gttgaattcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattacatt-cctc-aaaca-ttccccatccaaaca 49052935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 7 - 96
Target Start/End: Complemental strand, 34388351 - 34388262
Alignment:
Q  7 ttcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttag 96  Q
    |||||||||| |||||||||||||||||||||||||| |||| |||||||| || |||||||| ||||||||||||||||| ||||||||    
T  34388351 ttcaaacaatggaattcaccttaaagtagttgaattctctcagaacattacttttcctcaaaatatttccccatccaaacacactcttag 34388262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 9 - 93
Target Start/End: Original strand, 26162112 - 26162196
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    |||||||| |||||||||| |||||| ||||||||||||| |||||||||||||||||||||||| ||||||||||||| |||||    
T  26162112 caaacaatggaattcacctcaaagtatttgaattccctcataacattacattccctcaaaacattcccccatccaaacacactct 26162196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 113 - 245
Target Start/End: Complemental strand, 44208099 - 44207967
Alignment:
Q  113 taccttccatccatgccaagaattgtgagtgtattcttttggtcaccaaatgcaacagtgtaacgacagtgttcatgcaagcgaaactgagcaaatgacc 212  Q
    |||||||||||||||||||||||| ||| ||||||||||||  ||||||| ||||| |||||  ||      ||||||||| ||||| |||||| |||||    
T  44208099 taccttccatccatgccaagaattatgactgtattcttttgtacaccaaaagcaactgtgtactgagtaccctcatgcaagtgaaaccgagcaactgacc 44208000  T
Q  213 actctgaattgaaatactttggcaacactcctg 245  Q
    ||||||||||||||||||| |||||||||||||    
T  44207999 actctgaattgaaatacttgggcaacactcctg 44207967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 22 - 96
Target Start/End: Complemental strand, 2057466 - 2057392
Alignment:
Q  22 tcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttag 96  Q
    |||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| ||||||||    
T  2057466 tcacctcaaagtagttgaattccctcaaaacattacattcgctcaaaacattcccccatccaaacacactcttag 2057392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 9 - 93
Target Start/End: Original strand, 28539143 - 28539227
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    |||||||| |||||||||  |||||| |||||||||||||||||| ||||||||||||||||||| ||||||||||||| |||||    
T  28539143 caaacaatggaattcaccccaaagtatttgaattccctcaaaacaatacattccctcaaaacattcccccatccaaacacactct 28539227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 9 - 96
Target Start/End: Original strand, 35776930 - 35777017
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttag 96  Q
    |||| ||| |||||||||| |||||| ||||||||||||| |||||||||||||||||||||||| || |||||||||| ||||||||    
T  35776930 caaataatggaattcacctcaaagtatttgaattccctcataacattacattccctcaaaacattccctcatccaaacacactcttag 35777017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 9 - 95
Target Start/End: Original strand, 39342617 - 39342703
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactctta 95  Q
    |||||||| |||||||||  |||||| ||||||||||| |||||| ||||||||||||||||||| ||||||||||||| |||||||    
T  39342617 caaacaatggaattcaccccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacacactctta 39342703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 40854061 - 40854007
Alignment:
Q  1 gttgaattcaaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 55  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40854061 gttgaattcaaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 40854007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 99
Target Start/End: Original strand, 40854053 - 40854135
Alignment:
Q  18 gaattcaccttaaagtagttgaattccc-tcaaaacattacattccctcaaaacatttccccatccaaacagactcttaggat 99  Q
    ||||||| || ||||||||||||||||| |||||| |||||||||||||| |||||||||||||||||||| |||||||||||    
T  40854053 gaattcaactcaaagtagttgaattcccctcaaaatattacattccctcagaacatttccccatccaaacacactcttaggat 40854135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 6 - 63
Target Start/End: Complemental strand, 46069478 - 46069421
Alignment:
Q  6 attcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccc 63  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  46069478 attcaaacaatagaattcacctcaaagtagttgaattccctcaaaacattacattccc 46069421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 9 - 93
Target Start/End: Original strand, 6498740 - 6498824
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    |||||||| | |||||| | |||||| |||||||||||||||||||||||||||||||||||||| | ||||||||||| |||||    
T  6498740 caaacaatggtattcacatcaaagtatttgaattccctcaaaacattacattccctcaaaacattcctccatccaaacacactct 6498824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 44915264 - 44915324
Alignment:
Q  3 tgaattcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccc 63  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||    
T  44915264 tgaattcaaacaatagaattcaccttagagtagttgaattccctcaaaacattaaattccc 44915324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 9 - 96
Target Start/End: Original strand, 14603237 - 14603324
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttag 96  Q
    |||||||| ||||| |||  |||||| ||||||||||| |||||| ||||||||||||||||||| ||||||||||||| ||||||||    
T  14603237 caaacaatggaatttaccccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacacactcttag 14603324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 46482038 - 46481943
Alignment:
Q  1 gttgaattcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttag 96  Q
    |||||||||||||||||||||||| ||| || ||||| |||| ||||||||||||||||||  || ||| |||| |||||||||||| ||||||||    
T  46482038 gttgaattcaaacaatagaattcatcttcaaatagttaaatttcctcaaaacattacattctttcgaaatattttcccatccaaacacactcttag 46481943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 9 - 87
Target Start/End: Original strand, 23455222 - 23455300
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    |||||||| |||||||||  |||||| |||||||||||||||||| ||||||||||||||||||| || ||||||||||    
T  23455222 caaacaatggaattcaccccaaagtatttgaattccctcaaaacaatacattccctcaaaacattccctcatccaaaca 23455300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 24 - 93
Target Start/End: Original strand, 34398938 - 34399008
Alignment:
Q  24 accttaaagtagttgaattc-cctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    |||| ||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| |||||    
T  34398938 acctcaaagtagttgaattcacctcaaaacattacattccctcaaaacattcccccatccaaacacactct 34399008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 9 - 93
Target Start/End: Original strand, 18789221 - 18789305
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    |||||||| ||||||||||||||||| ||||||||||||| ||||||| |||| ||||||| ||| | ||||||||||| |||||    
T  18789221 caaacaatggaattcaccttaaagtatttgaattccctcataacattatattctctcaaaatattcctccatccaaacacactct 18789305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 9 - 93
Target Start/End: Original strand, 23548586 - 23548670
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    |||||||| |||||||||  |||||| ||||||| |||||||||| ||||||||||||||||||| | ||||||||||| |||||    
T  23548586 caaacaatggaattcaccccaaagtatttgaatttcctcaaaacaatacattccctcaaaacattcctccatccaaacacactct 23548670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 9 - 93
Target Start/End: Complemental strand, 35455888 - 35455804
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    |||||||| ||||| |||  |||||| ||||||||||| |||||| ||||||||||||||||||| ||||||||||||| |||||    
T  35455888 caaacaatggaatttaccccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacacactct 35455804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 9 - 92
Target Start/End: Original strand, 9784906 - 9784989
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactc 92  Q
    |||||||| || ||||||  |||||| |||||||||||||||||| ||||||||||||||||||| | ||||||||||| ||||    
T  9784906 caaacaatggatttcaccccaaagtatttgaattccctcaaaacaatacattccctcaaaacattcctccatccaaacacactc 9784989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 9 - 100
Target Start/End: Original strand, 25189201 - 25189292
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttaggatt 100  Q
    ||||||||  ||||||| | |||||| |||||||||||||||||||| |||| |||||||||||| || |||||||||| ||||||| ||||    
T  25189201 caaacaatgaaattcacttcaaagtatttgaattccctcaaaacattgcattacctcaaaacattcccacatccaaacacactcttaagatt 25189292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 9 - 95
Target Start/End: Original strand, 29639190 - 29639276
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactctta 95  Q
    |||||||| |||||||||| ||| || ||||||| ||||| ||||||||||||||| |||||||| ||||||||| ||| |||||||    
T  29639190 caaacaatggaattcacctcaaaatatttgaatttcctcataacattacattccctgaaaacattcccccatccatacacactctta 29639276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 44915270 - 44915192
Alignment:
Q  18 gaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttag 96  Q
    |||||||||| |||||||||||||||| |||||||||||| ||||||||||| |||  | |||||||||| ||||||||    
T  44915270 gaattcacctcaaagtagttgaattccttcaaaacattacgttccctcaaaaaattctctcatccaaacacactcttag 44915192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 49052860 - 49052784
Alignment:
Q  18 gaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactctta 95  Q
    ||||||| || ||||||||||||||| |||||||||||||||| ||||||||||||| | |||||||||| |||||||    
T  49052860 gaattcaactcaaagtagttgaattcactcaaaacattacatt-cctcaaaacattttctcatccaaacacactctta 49052784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 22 - 98
Target Start/End: Original strand, 34388353 - 34388429
Alignment:
Q  22 tcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttagga 98  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||||||||| |  ||| |||||| ||||| ||||    
T  34388353 tcacctcaaagtagttgaattccctcaaaatattacattccctcaaaacattccatcattcaaacacactctaagga 34388429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 9 - 87
Target Start/End: Complemental strand, 43791174 - 43791098
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    |||||||| || ||||||| |||||| ||||||||||||||||||||||||||||||  ||| ||||| ||||||||||    
T  43791174 caaacaatggagttcacctcaaagtatttgaattccctcaaaacattacattccctc--aacttttcctcatccaaaca 43791098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 23 - 93
Target Start/End: Original strand, 5644766 - 5644836
Alignment:
Q  23 caccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    ||||| ||| || ||||||||||||||||||||||||| ||||||||| || ||||||||||||| |||||    
T  5644766 cacctcaaaataattgaattccctcaaaacattacattacctcaaaacgttcccccatccaaacacactct 5644836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 29 - 95
Target Start/End: Complemental strand, 30524319 - 30524253
Alignment:
Q  29 aaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactctta 95  Q
    |||||| ||||||||||||||||||||||||||| |||||||||| | ||||||| ||| |||||||    
T  30524319 aaagtatttgaattccctcaaaacattacattccttcaaaacattactccatccatacacactctta 30524253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 29065903 - 29065978
Alignment:
Q  18 gaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    |||| ||||| ||| || ||||||||||||||||||||||||| ||| |||||||| | ||||||||||| |||||    
T  29065903 gaatccacctcaaaataattgaattccctcaaaacattacattaccttaaaacattcctccatccaaacacactct 29065978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 9 - 87
Target Start/End: Complemental strand, 30629141 - 30629063
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    ||||||||  ||||||||  |||||| || ||||| || |||||| ||||||||||||||||||| |||||||||||||    
T  30629141 caaacaatgaaattcaccccaaagtatttaaattctcttaaaacaatacattccctcaaaacattcccccatccaaaca 30629063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 102
Target Start/End: Original strand, 22391562 - 22391655
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttaggatttt 102  Q
    ||||||||  ||||||||| ||| || || ||||| |||||||||||||||||||||||||||||  | ||| |||||| ||| ||| ||||||    
T  22391562 caaacaatgaaattcacctcaaaatatttaaattctctcaaaacattacattccctcaaaacattatctcattcaaacacacttttaagatttt 22391655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 3905634 - 3905698
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatt 73  Q
    ||||||||||||||||||| |||||| ||||||||| | |||||||||  || ||||||||||||    
T  3905634 caaacaatagaattcacctcaaagtatttgaattccttgaaaacattatttttcctcaaaacatt 3905698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 31913306 - 31913256
Alignment:
Q  5 aattcaaacaatagaatt-caccttaaagtagttgaattccctcaaaacatt 55  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  31913306 aattcaaacaatagaatttcaccttaaa-tagttgaattccctcaaaacatt 31913256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 55
Target Start/End: Original strand, 30587878 - 30587924
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 55  Q
    |||||||| |||||||| |||||||| ||||||||||||||||||||    
T  30587878 caaacaatggaattcacattaaagtatttgaattccctcaaaacatt 30587924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 55
Target Start/End: Complemental strand, 32650657 - 32650611
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 55  Q
    ||||||||| ||||||||| |||||| ||||||||||||||||||||    
T  32650657 caaacaataaaattcacctcaaagtatttgaattccctcaaaacatt 32650611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 21635960 - 21635883
Alignment:
Q  18 gaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactctta 95  Q
    |||| ||||| ||| || |||||| |||||||||||||||||| |||||||| |||  ||||||||| || |||||||    
T  21635960 gaatccacctcaaaataattgaatcccctcaaaacattacattacctcaaaatattctcccatccaagcacactctta 21635883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 66
Target Start/End: Complemental strand, 18789600 - 18789544
Alignment:
Q  10 aaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctca 66  Q
    ||||||| |||||||||| |||||| ||||||||||||  |||||||||||| ||||    
T  18789600 aaacaatggaattcacctcaaagtatttgaattccctcgtaacattacattctctca 18789544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 84
Target Start/End: Original strand, 22351874 - 22351922
Alignment:
Q  36 ttgaattccctcaaaacattacattccctcaaaacatttccccatccaa 84  Q
    |||||||| |||||||||||||||| || ||||||||| ||||||||||    
T  22351874 ttgaattctctcaaaacattacattaccccaaaacattcccccatccaa 22351922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 93
Target Start/End: Original strand, 46482044 - 46482104
Alignment:
Q  33 tagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    ||||||||||  |||||||||||||||||| |||| ||||||| |||| |||||| |||||    
T  46482044 tagttgaattttctcaaaacattacattccttcaacacatttctccattcaaacacactct 46482104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 55
Target Start/End: Complemental strand, 14790197 - 14790151
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 55  Q
    |||| |||| ||||||||| |||||| ||||||||||||||||||||    
T  14790197 caaataataaaattcacctcaaagtatttgaattccctcaaaacatt 14790151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 55
Target Start/End: Complemental strand, 45984424 - 45984378
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 55  Q
    |||||||| |||||||||| |||||| ||||||||||| ||||||||    
T  45984424 caaacaattgaattcacctcaaagtatttgaattcccttaaaacatt 45984378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 55
Target Start/End: Complemental strand, 45988784 - 45988738
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 55  Q
    |||||||| |||||||||| |||||| ||||||||||| ||||||||    
T  45988784 caaacaattgaattcacctcaaagtatttgaattcccttaaaacatt 45988738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 95
Target Start/End: Complemental strand, 29195756 - 29195707
Alignment:
Q  46 tcaaaacattacattccctcaaaacatttccccatccaaacagactctta 95  Q
    ||||||||||||||| |||||||| ||| | ||||||||||| |||||||    
T  29195756 tcaaaacattacattacctcaaaatattcctccatccaaacacactctta 29195707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 95
Target Start/End: Complemental strand, 31913271 - 31913234
Alignment:
Q  58 attccctcaaaacatttccccatccaaacagactctta 95  Q
    |||||||||||||||| ||||||||||||| |||||||    
T  31913271 attccctcaaaacattcccccatccaaacacactctta 31913234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 67
Target Start/End: Complemental strand, 31632876 - 31632828
Alignment:
Q  19 aattcaccttaaagtagttgaattccctcaaaacattacattccctcaa 67  Q
    |||| |||| |||||| ||||||||||||| ||||||||||| ||||||    
T  31632876 aatttacctcaaagtatttgaattccctcataacattacatttcctcaa 31632828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 77; Significance: 1e-35; HSPs: 53)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 784860 - 784952
Alignment:
Q  1 gttgaattcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| ||||||||||||| |||||    
T  784860 gttgaattcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccatcaaaatattcccccatccaaacacactct 784952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 27033577 - 27033488
Alignment:
Q  6 attcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactctta 95  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| |||||||    
T  27033577 attcaaacaatagaattcacctcaaagtagttgaattccctcaaaacattacattctctcaaaacattcccccatccaaacacactctta 27033488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 6 - 93
Target Start/End: Original strand, 41461587 - 41461674
Alignment:
Q  6 attcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||    
T  41461587 attcaaacaatagaattcacctcaaaatagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactct 41461674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 14365775 - 14365698
Alignment:
Q  18 gaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactctta 95  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||    
T  14365775 gaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactctta 14365698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 10 - 93
Target Start/End: Original strand, 14365777 - 14365858
Alignment:
Q  10 aaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| |||||    
T  14365777 aaacaatagaattcacc--aaagtagttgaattccctcaaaacattacattccctcaaaacattcctccatccaaacacactct 14365858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 14537274 - 14537198
Alignment:
Q  18 gaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactctt 94  Q
    |||||||||| |||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  14537274 gaattcacctcaaagtagttgaattacctcaaaacattacattccctcaaaacattcccccatccaaacacactctt 14537198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 9 - 96
Target Start/End: Complemental strand, 10480203 - 10480116
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttag 96  Q
    |||||||| |||||||||| |||||| ||||||||||||  |||||||||||||||||||||||| ||||||||||||| ||||||||    
T  10480203 caaacaatggaattcacctcaaagtatttgaattccctcgtaacattacattccctcaaaacattcccccatccaaacacactcttag 10480116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 9 - 93
Target Start/End: Complemental strand, 13017863 - 13017779
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    |||||||| |||||||||| |||||| ||||||||||| |||| |||||||||||||||||||||||| |||||||||| |||||    
T  13017863 caaacaatggaattcacctcaaagtatttgaattcccttaaaatattacattccctcaaaacatttccacatccaaacacactct 13017779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 9 - 101
Target Start/End: Original strand, 33189246 - 33189338
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttaggattt 101  Q
    |||||||| |||||||||  |||||| ||||||||||| |||||| ||||||||||||||||||| ||||||||||||| |||||||| ||||    
T  33189246 caaacaatggaattcaccccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacacactcttagaattt 33189338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 11716483 - 11716408
Alignment:
Q  18 gaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||   ||||||||||| |||||    
T  11716483 gaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcttccatccaaacacactct 11716408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 95
Target Start/End: Complemental strand, 17180374 - 17180295
Alignment:
Q  16 tagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactctta 95  Q
    ||||||||| || ||| ||||||||||||||||||||||||||||||||||||||||| || |||||||||| |||||||    
T  17180374 tagaattcatctcaaaatagttgaattccctcaaaacattacattccctcaaaacattccctcatccaaacacactctta 17180295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 9 - 95
Target Start/End: Complemental strand, 769120 - 769034
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactctta 95  Q
    |||||||| |||||||||  |||||| ||||||||||| |||||| ||||||||||||||||||| ||||||||||||| |||||||    
T  769120 caaacaatggaattcaccccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacacactctta 769034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 7 - 93
Target Start/End: Complemental strand, 10244263 - 10244177
Alignment:
Q  7 ttcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    ||||||||||| |||||||||| |||||||||||||||||||||||||||| |||||||| || |||  |||||||||||| |||||    
T  10244263 ttcaaacaataaaattcaccttgaagtagttgaattccctcaaaacattactttccctcagaatattctcccatccaaacacactct 10244177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 9 - 87
Target Start/End: Original strand, 11532242 - 11532320
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    |||||||| |||||||||| |||||| |||||||||||||||||||||||||||||| ||| ||| |||||||||||||    
T  11532242 caaacaatggaattcacctcaaagtatttgaattccctcaaaacattacattccctccaaatattcccccatccaaaca 11532320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 9 - 87
Target Start/End: Complemental strand, 11793979 - 11793901
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    |||||||| |||||||||| |||||| ||||||||||||| |||||||||||||||||||| ||| |||||||||||||    
T  11793979 caaacaatggaattcacctcaaagtatttgaattccctcataacattacattccctcaaaatattcccccatccaaaca 11793901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 10 - 87
Target Start/End: Complemental strand, 28740679 - 28740602
Alignment:
Q  10 aaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    ||||||| ||||| || | |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  28740679 aaacaatggaatttacatcaaagtatttgaattccctcaaaacattacattccctcaaaacatttccccattcaaaca 28740602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 9 - 93
Target Start/End: Original strand, 1583798 - 1583882
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    |||||||| |||||||||  |||||| ||||||||||| |||||| ||||||||||||||||||| ||||||||||||| |||||    
T  1583798 caaacaatggaattcaccccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacacactct 1583882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 14537268 - 14537320
Alignment:
Q  3 tgaattcaaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 55  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14537268 tgaattcaaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 14537320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 9 - 93
Target Start/End: Original strand, 45094460 - 45094544
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    |||||||| |||||||| ||||||||||| |||||||||||||||||| |||||||||||||||| || ||| |||||| |||||    
T  45094460 caaacaatggaattcactttaaagtagttaaattccctcaaaacattatattccctcaaaacattccctcattcaaacacactct 45094544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 784868 - 784790
Alignment:
Q  18 gaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttag 96  Q
    ||||||| || ||||||||| |||||| |||||||||||||||||||||||||||||  ||||||||||| ||||||||    
T  784868 gaattcaactcaaagtagttaaattccttcaaaacattacattccctcaaaacatttttccatccaaacacactcttag 784790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 9 - 95
Target Start/End: Complemental strand, 11141389 - 11141303
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactctta 95  Q
    ||||||||  ||||||||  |||||| ||||||||||| |||||| ||||||||||||||||||| ||||||||||||| |||||||    
T  11141389 caaacaatgtaattcaccccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacacactctta 11141303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 10 - 60
Target Start/End: Original strand, 14954343 - 14954393
Alignment:
Q  10 aaacaatagaattcaccttaaagtagttgaattccctcaaaacattacatt 60  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14954343 aaacaatagaattcaccttaaagtagttgaattccctcaaaacattacatt 14954393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 9 - 95
Target Start/End: Complemental strand, 39630308 - 39630223
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactctta 95  Q
    ||||||||||||||| ||| ||| || |||||||||||||||||| ||||||||||||||||||||| |||| |||||| |||||||    
T  39630308 caaacaatagaattcccctcaaa-tatttgaattccctcaaaacaatacattccctcaaaacatttctccattcaaacacactctta 39630223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 96
Target Start/End: Complemental strand, 11684680 - 11684596
Alignment:
Q  3 tgaattcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttag 96  Q
    ||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||| ||||||||||||| | ||||||    
T  11684680 tgaattcaaacaatagaattcacctt---------gaattccctcaaaacattacattccctcaaaacattcccccatccaaacacattcttag 11684596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 3345835 - 3345783
Alignment:
Q  3 tgaattcaaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 55  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  3345835 tgaattcaaacaatagaatttaccttaaagtagttgaattccctcaaaacatt 3345783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 11824749 - 11824801
Alignment:
Q  3 tgaattcaaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 55  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  11824749 tgaattcaaacaatataattcaccttaaagtagttgaattccctcaaaacatt 11824801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 9 - 85
Target Start/End: Complemental strand, 30698365 - 30698289
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaa 85  Q
    ||||||||  ||||||||| || ||| ||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  30698365 caaacaatgaaattcacctcaaggtatttgaattccttcaaaacattacattccctcaaaacattcccccatccaaa 30698289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 9 - 95
Target Start/End: Original strand, 7228001 - 7228087
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactctta 95  Q
    ||||||||  |||| |||| || ||| || |||||| |||||||||||||||| ||||||||||||||||||||||||| |||||||    
T  7228001 caaacaatgaaatttacctcaaggtatttaaattccttcaaaacattacattctctcaaaacatttccccatccaaacacactctta 7228087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 3 - 85
Target Start/End: Original strand, 11716477 - 11716550
Alignment:
Q  3 tgaattcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaa 85  Q
    ||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||| |||||||||||    
T  11716477 tgaattcaaacaatagaattcacctt---------gaattccctcaaaacattacattccctcaaaacattcccccatccaaa 11716550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 6 - 87
Target Start/End: Complemental strand, 40026151 - 40026070
Alignment:
Q  6 attcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    |||||||||||||||||||||| |||||| || |||| ||||||||||||| ||| |||||||| ||| |||||| ||||||    
T  40026151 attcaaacaatagaattcacctcaaagtatttaaatttcctcaaaacattatattacctcaaaatattcccccattcaaaca 40026070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 9 - 93
Target Start/End: Original strand, 35047668 - 35047752
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    |||||| | |||||||||  |||||| ||||||||||| |||||| |||||| |||||||||||| ||||||||||||| |||||    
T  35047668 caaacattggaattcaccccaaagtatttgaattcccttaaaacaatacatttcctcaaaacattcccccatccaaacacactct 35047752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 9 - 96
Target Start/End: Complemental strand, 3092366 - 3092279
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttag 96  Q
    |||||||| ||||| |||  |||||| ||||||| |||||||||| ||||||||||||||||||| | ||||||||| | ||||||||    
T  3092366 caaacaatggaatttaccccaaagtatttgaatttcctcaaaacaatacattccctcaaaacattcctccatccaaatacactcttag 3092279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 41461590 - 41461512
Alignment:
Q  18 gaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttag 96  Q
    |||| ||||| ||| || || |||||||||||||||||||||| |||||||| ||||||||||||||||| ||| ||||    
T  41461590 gaatccacctcaaaataattaaattccctcaaaacattacattacctcaaaatatttccccatccaaacacactattag 41461512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 9 - 66
Target Start/End: Original strand, 32839637 - 32839694
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctca 66  Q
    |||||||| |||||||| | |||||| |||||||||||||||||||||||||||||||    
T  32839637 caaacaatggaattcacgtcaaagtatttgaattccctcaaaacattacattccctca 32839694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 102
Target Start/End: Complemental strand, 14954341 - 14954257
Alignment:
Q  18 gaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttaggatttt 102  Q
    ||||| || ||||||||||||||||| || |||| ||||||||| ||||||||||| | | ||||||||| ||||||| ||||||    
T  14954341 gaatttactttaaagtagttgaattctcttaaaagattacattcactcaaaacattcctctatccaaacacactcttaagatttt 14954257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 9 - 67
Target Start/End: Original strand, 7167656 - 7167714
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaa 67  Q
    ||||||||  ||||||||| |||||| ||||||||| ||||||||||||||||||||||    
T  7167656 caaacaatgaaattcacctcaaagtatttgaattccttcaaaacattacattccctcaa 7167714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 23 - 93
Target Start/End: Complemental strand, 8735914 - 8735844
Alignment:
Q  23 caccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    ||||| |||||| ||||||||||||  ||||||| ||||||||||||||| | |||||||||||| |||||    
T  8735914 cacctcaaagtatttgaattccctcgtaacattatattccctcaaaacatgttcccatccaaacacactct 8735844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 17905729 - 17905651
Alignment:
Q  18 gaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttag 96  Q
    |||||||||| ||| || ||||||||| | |||||||||||||| ||||||||||| || ||||| |||| ||||||||    
T  17905729 gaattcacctcaaaatatttgaattcctttaaaacattacattctctcaaaacattccctcatcctaacacactcttag 17905651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 57
Target Start/End: Complemental strand, 11607304 - 11607257
Alignment:
Q  10 aaacaatagaattcaccttaaagtagttgaattccctcaaaacattac 57  Q
    ||||||| |||||||||| |||||| ||||||||||||||||||||||    
T  11607304 aaacaatggaattcacctcaaagtatttgaattccctcaaaacattac 11607257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 55
Target Start/End: Original strand, 8736430 - 8736476
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 55  Q
    |||||||| |||||||||| |||||| ||||||||||||||||||||    
T  8736430 caaacaatggaattcacctcaaagtatttgaattccctcaaaacatt 8736476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 87
Target Start/End: Complemental strand, 740791 - 740710
Alignment:
Q  6 attcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    |||||||||||| ||||||||| |||  |  ||||||| | ||||||||||||||  ||||||||||||  |||||||||||    
T  740791 attcaaacaataaaattcacctcaaatgatatgaattctcacaaaacattacattatctcaaaacatttatccatccaaaca 740710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 11684674 - 11684711
Alignment:
Q  18 gaattcaccttaaagtagttgaattccctcaaaacatt 55  Q
    |||||||||| |||||||||||||||||||||||||||    
T  11684674 gaattcacctcaaagtagttgaattccctcaaaacatt 11684711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 92
Target Start/End: Original strand, 30751338 - 30751418
Alignment:
Q  11 aacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactc 92  Q
    |||||||||||||| |||||| || || ||||| ||||||||||||||||  |||||||||||  | |||||||||| ||||    
T  30751338 aacaatagaattcatcttaaa-tatttaaattcactcaaaacattacattatctcaaaacattctctcatccaaacacactc 30751418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 87
Target Start/End: Original strand, 44256191 - 44256259
Alignment:
Q  18 gaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    |||||||||| ||| || | ||||||||||||||||||||||| |||| ||| ||| |||||||||||||    
T  44256191 gaattcacctcaaaataatcgaattccctcaaaacattacattacctc-aaatattcccccatccaaaca 44256259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 10 - 57
Target Start/End: Complemental strand, 11595402 - 11595355
Alignment:
Q  10 aaacaatagaattcaccttaaagtagttgaattccctcaaaacattac 57  Q
    ||||||| |||||||||| ||| || ||||||||||||||||||||||    
T  11595402 aaacaatggaattcacctcaaaatatttgaattccctcaaaacattac 11595355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 55
Target Start/End: Complemental strand, 20935790 - 20935744
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 55  Q
    |||||||| |||||||| | |||||| ||||||||||||||||||||    
T  20935790 caaacaatggaattcacatcaaagtatttgaattccctcaaaacatt 20935744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 58 - 96
Target Start/End: Original strand, 41585710 - 41585748
Alignment:
Q  58 attccctcaaaacatttccccatccaaacagactcttag 96  Q
    |||||||||||||||||| ||||||||||| ||||||||    
T  41585710 attccctcaaaacatttcaccatccaaacacactcttag 41585748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 87
Target Start/End: Original strand, 3345852 - 3345881
Alignment:
Q  58 attccctcaaaacatttccccatccaaaca 87  Q
    ||||||||||||||||||||||||||||||    
T  3345852 attccctcaaaacatttccccatccaaaca 3345881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 11824755 - 11824718
Alignment:
Q  18 gaattcaccttaaagtagttgaattccctcaaaacatt 55  Q
    ||||||| || |||||||||||||||||||||||||||    
T  11824755 gaattcatctcaaagtagttgaattccctcaaaacatt 11824718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 55
Target Start/End: Complemental strand, 21504537 - 21504488
Alignment:
Q  6 attcaaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 55  Q
    ||||||||||| ||||||| || ||| || ||||||||||||||||||||    
T  21504537 attcaaacaatggaattcatctcaaaatatttgaattccctcaaaacatt 21504488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 87
Target Start/End: Original strand, 44205678 - 44205707
Alignment:
Q  58 attccctcaaaacatttccccatccaaaca 87  Q
    ||||||||||||||||||||||||||||||    
T  44205678 attccctcaaaacatttccccatccaaaca 44205707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 67
Target Start/End: Original strand, 11532169 - 11532217
Alignment:
Q  19 aattcaccttaaagtagttgaattccctcaaaacattacattccctcaa 67  Q
    |||| |||| |||||| ||||||||||||| ||||||||||| ||||||    
T  11532169 aatttacctcaaagtatttgaattccctcataacattacatttcctcaa 11532217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 53
Target Start/End: Complemental strand, 44255718 - 44255674
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaaca 53  Q
    ||||||||||||||||||  |||||| |||||||| |||||||||    
T  44255718 caaacaatagaattcaccccaaagtatttgaattctctcaaaaca 44255674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 76; Significance: 4e-35; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 5 - 96
Target Start/End: Original strand, 776151 - 776242
Alignment:
Q  5 aattcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttag 96  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| || ||||||||| ||||||||    
T  776151 aattcaaacaatagaattcaccttaaagtagttgaatttcctcaaaacattacattccctcaaaacattttcctatccaaacacactcttag 776242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 3 - 93
Target Start/End: Complemental strand, 9285737 - 9285647
Alignment:
Q  3 tgaattcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||    
T  9285737 tgaattcaaacaatagaattcagctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactct 9285647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 6 - 87
Target Start/End: Complemental strand, 9763099 - 9763018
Alignment:
Q  6 attcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  9763099 attcaaacaatagaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccttccaaaca 9763018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 3 - 97
Target Start/End: Original strand, 6919777 - 6919870
Alignment:
Q  3 tgaattcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttagg 97  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||||||||||| ||||||||||||||| ||||||||||||| |||||||||    
T  6919777 tgaattcaaacaatagaattcaccttaaa-tggttgaattccctcaaaacattactttccctcaaaacattcccccatccaaacacactcttagg 6919870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 27 - 98
Target Start/End: Original strand, 8574758 - 8574829
Alignment:
Q  27 ttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttagga 98  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  8574758 ttaaagtagttgaattccctcaaaacattacattcactcaaaacatttccccatccaaacacactcttagga 8574829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 27 - 93
Target Start/End: Complemental strand, 8574761 - 8574695
Alignment:
Q  27 ttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||    
T  8574761 ttaaagtagttgaattccctcaaaacattacattcactcaaaacatttccccatccaaacacactct 8574695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 18 - 87
Target Start/End: Complemental strand, 6919783 - 6919714
Alignment:
Q  18 gaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||| |||| | |||||||||||    
T  6919783 gaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaccattcctccatccaaaca 6919714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 9 - 102
Target Start/End: Original strand, 34244969 - 34245062
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttaggatttt 102  Q
    |||||||| ||||| || | |||||| |||||||||||||||||||||||||||||||||||||| | ||||||||||| ||||| ||| ||||    
T  34244969 caaacaatggaatttacatcaaagtatttgaattccctcaaaacattacattccctcaaaacattcctccatccaaacacactctaagggtttt 34245062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 87
Target Start/End: Original strand, 15299510 - 15299577
Alignment:
Q  19 aattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||    
T  15299510 aattcacctcaaagtagttgaattccttcaaaacattacattccctcaaaaca-ttccccatccaaaca 15299577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 26 - 93
Target Start/End: Complemental strand, 776147 - 776080
Alignment:
Q  26 cttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| ||||| |||||    
T  776147 cttaaagtagttgaatttcctcaaaacattacattccctcaaaacatttctccatctaaacacactct 776080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 9 - 96
Target Start/End: Complemental strand, 28918249 - 28918162
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttag 96  Q
    ||||||||  ||||||||| |||||| ||||||| ||| |||||||||||||||||||||||||| | ||||||||||| ||||||||    
T  28918249 caaacaatgaaattcacctcaaagtatttgaatttccttaaaacattacattccctcaaaacattcctccatccaaacacactcttag 28918162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 9 - 93
Target Start/End: Complemental strand, 13487359 - 13487275
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    ||||||||  ||||||||| |||||| ||||||||||||| |||| ||||||||||||||||||| ||||||| ||||| |||||    
T  13487359 caaacaatgaaattcacctcaaagtatttgaattccctcataacactacattccctcaaaacattcccccatctaaacacactct 13487275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 9 - 93
Target Start/End: Original strand, 29889423 - 29889507
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    |||| ||| |||||||| | |||||| ||||||||||||||||||||||||||| |||||||||| | ||||||||||| |||||    
T  29889423 caaataatggaattcacatcaaagtatttgaattccctcaaaacattacattccatcaaaacattcctccatccaaacacactct 29889507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 9 - 93
Target Start/End: Complemental strand, 1368561 - 1368477
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    ||||||||||||||||||| |||  | ||||||||||| |||| ||||||||| ||||||||||| | ||||||||||| |||||    
T  1368561 caaacaatagaattcacctcaaaacatttgaattcccttaaaatattacattctctcaaaacattcctccatccaaacacactct 1368477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 21 - 73
Target Start/End: Complemental strand, 15299471 - 15299419
Alignment:
Q  21 ttcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatt 73  Q
    ||||||| ||||||||||||||| ||||||||||||||||| |||||||||||    
T  15299471 ttcacctcaaagtagttgaattctctcaaaacattacattcgctcaaaacatt 15299419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 36 - 95
Target Start/End: Original strand, 9763114 - 9763173
Alignment:
Q  36 ttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactctta 95  Q
    ||||||||||||||||||||||||| |||||||| ||| | ||||||||||| |||||||    
T  9763114 ttgaattccctcaaaacattacattacctcaaaatattcctccatccaaacacactctta 9763173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 9 - 87
Target Start/End: Complemental strand, 15832550 - 15832472
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    ||||||||  ||||||||  |||||| ||||||||||| ||||||||||||||| || ||||||| || ||||||||||    
T  15832550 caaacaatgaaattcaccccaaagtatttgaattcccttaaaacattacattccttcgaaacattacctcatccaaaca 15832472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 71
Target Start/End: Original strand, 6358237 - 6358302
Alignment:
Q  6 attcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaaca 71  Q
    |||| ||||||||||||||||  |||||| || ||||| |||||||||||||||| ||||||||||    
T  6358237 attctaacaatagaattcaccacaaagtatttaaattctctcaaaacattacattacctcaaaaca 6358302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 66
Target Start/End: Complemental strand, 34364827 - 34364770
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctca 66  Q
    |||||||| |||||||||| |||||| || |||||||||| |||||||||||||||||    
T  34364827 caaacaatggaattcacctcaaagtatttaaattccctcataacattacattccctca 34364770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 58 - 96
Target Start/End: Complemental strand, 8475214 - 8475176
Alignment:
Q  58 attccctcaaaacatttccccatccaaacagactcttag 96  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  8475214 attccctcaaaacatttccccatccaaacacactcttag 8475176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 66
Target Start/End: Complemental strand, 9697546 - 9697489
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctca 66  Q
    |||||||| |||||||| | |||||| ||||||||| ||||||||| |||||||||||    
T  9697546 caaacaatggaattcacatcaaagtatttgaattccttcaaaacatcacattccctca 9697489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 53 - 93
Target Start/End: Complemental strand, 33733472 - 33733432
Alignment:
Q  53 attacattccctcaaaacatttccccatccaaacagactct 93  Q
    ||||||||||||||||||||| ||||||||||||| |||||    
T  33733472 attacattccctcaaaacattcccccatccaaacacactct 33733432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 30 - 61
Target Start/End: Complemental strand, 15299505 - 15299474
Alignment:
Q  30 aagtagttgaattccctcaaaacattacattc 61  Q
    ||||||||||||||||||||||||||||||||    
T  15299505 aagtagttgaattccctcaaaacattacattc 15299474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 55
Target Start/End: Complemental strand, 8475245 - 8475199
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 55  Q
    |||||||| |||||||||  |||||| ||||||||||||||||||||    
T  8475245 caaacaatggaattcacccaaaagtatttgaattccctcaaaacatt 8475199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 101
Target Start/End: Complemental strand, 1195384 - 1195343
Alignment:
Q  60 tccctcaaaacatttccccatccaaacagactcttaggattt 101  Q
    |||||||||||||| ||||||||||||| |||||||| ||||    
T  1195384 tccctcaaaacattcccccatccaaacacactcttagtattt 1195343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 55
Target Start/End: Complemental strand, 1195416 - 1195371
Alignment:
Q  10 aaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 55  Q
    ||||||| |||||||||| |||||| ||||| ||||||||||||||    
T  1195416 aaacaatggaattcacctcaaagtatttgaaatccctcaaaacatt 1195371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 9285731 - 9285768
Alignment:
Q  18 gaattcaccttaaagtagttgaattccctcaaaacatt 55  Q
    ||||||| || |||||||||||||||||||||||||||    
T  9285731 gaattcatctcaaagtagttgaattccctcaaaacatt 9285768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 65
Target Start/End: Complemental strand, 31412985 - 31412929
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctc 65  Q
    |||||||| |||||||  | |||||| ||||||||||||||||||| | ||||||||    
T  31412985 caaacaatggaattcatatcaaagtatttgaattccctcaaaacatcatattccctc 31412929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 69; Significance: 6e-31; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 83025 - 82949
Alignment:
Q  11 aacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  83025 aacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacattcacccatccaaaca 82949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 7 - 87
Target Start/End: Original strand, 56347 - 56427
Alignment:
Q  7 ttcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| || ||||||||||    
T  56347 ttcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattactttccctcaaaatattccctcatccaaaca 56427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 22 - 63
Target Start/End: Complemental strand, 56345 - 56304
Alignment:
Q  22 tcaccttaaagtagttgaattccctcaaaacattacattccc 63  Q
    |||||| |||||||||||||||||||||||||||||||||||    
T  56345 tcacctcaaagtagttgaattccctcaaaacattacattccc 56304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1562 (Bit Score: 62; Significance: 9e-27; HSPs: 2)
Name: scaffold1562
Description:

Target: scaffold1562; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 7 - 96
Target Start/End: Complemental strand, 491 - 402
Alignment:
Q  7 ttcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttag 96  Q
    |||||||||||||||||||| | |||||||||||||||||||||||||||  ||||||||||| ||| ||||||||||||| ||||||||    
T  491 ttcaaacaatagaattcaccctgaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactcttag 402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1562; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 22 - 87
Target Start/End: Original strand, 493 - 558
Alignment:
Q  22 tcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  493 tcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaaca 558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1158 (Bit Score: 62; Significance: 9e-27; HSPs: 2)
Name: scaffold1158
Description:

Target: scaffold1158; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 7 - 96
Target Start/End: Original strand, 2102 - 2191
Alignment:
Q  7 ttcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttag 96  Q
    |||||||||||||||||||| | |||||||||||||||||||||||||||  ||||||||||| ||| ||||||||||||| ||||||||    
T  2102 ttcaaacaatagaattcaccctgaagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactcttag 2191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1158; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 22 - 87
Target Start/End: Complemental strand, 2100 - 2035
Alignment:
Q  22 tcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  2100 tcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaaca 2035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 14 - 93
Target Start/End: Complemental strand, 42076 - 41997
Alignment:
Q  14 aatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| | |||| |||||| |||||    
T  42076 aatagaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcctccattcaaacacactct 41997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 36 - 95
Target Start/End: Original strand, 42080 - 42139
Alignment:
Q  36 ttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactctta 95  Q
    |||||||| |||||||||||||||||||||||||| || ||||||||||||| |||||||    
T  42080 ttgaattctctcaaaacattacattccctcaaaacgttcccccatccaaacacactctta 42139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 57; Significance: 8e-24; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 9 - 97
Target Start/End: Complemental strand, 4159 - 4071
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttagg 97  Q
    ||||||||||||||||||| |||||| |||||||||||||||||||||||||| ||||||||||| |   ||||||||| |||||||||    
T  4159 caaacaatagaattcacctcaaagtatttgaattccctcaaaacattacattctctcaaaacattcctttatccaaacacactcttagg 4071  T

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Target: scaffold0318 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 9 - 93
Target Start/End: Complemental strand, 2950 - 2867
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactct 93  Q
    |||||||| |||||||||| ||| || |||||||||||||||||||||||||| ||| ||||||| ||||||| ||||| |||||    
T  2950 caaacaatggaattcacctcaaa-tatttgaattccctcaaaacattacattctctcgaaacattcccccatctaaacacactct 2867  T

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Target: scaffold0027 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 10970 - 10906
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatt 73  Q
    |||||||| |||||||| | |||||| ||||||||||||||||||||||||||||| ||||||||    
T  10970 caaacaatggaattcacgtcaaagtatttgaattccctcaaaacattacattcccttaaaacatt 10906  T

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Target: scaffold0400 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 9 - 92
Target Start/End: Original strand, 4487 - 4570
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactc 92  Q
    |||||||| |||||||||  ||| || ||||||| ||||||||||||| |||||||||||||||| || |||||||||| ||||    
T  4487 caaacaatggaattcaccccaaaatatttgaatttcctcaaaacattatattccctcaaaacattccctcatccaaacacactc 4570  T

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Target: scaffold0365 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 9 - 92
Target Start/End: Original strand, 5131 - 5214
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactc 92  Q
    |||||||| |||||||||  ||| || ||||||| ||||||||||||| |||||||||||||||| || |||||||||| ||||    
T  5131 caaacaatggaattcaccccaaaatatttgaatttcctcaaaacattatattccctcaaaacattccctcatccaaacacactc 5214  T

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Target: scaffold0129 (Bit Score: 44; Significance: 5e-16; HSPs: 2)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 10 - 97
Target Start/End: Complemental strand, 19280 - 19194
Alignment:
Q  10 aaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactcttagg 97  Q
    ||||||| |||||||||| ||| || ||||||||| |||||||||||||||||||||||| | | ||||||||||||| ||| |||||    
T  19280 aaacaatggaattcacctcaaaatatttgaattcc-tcaaaacattacattccctcaaaatactcccccatccaaacacacttttagg 19194  T

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Target: scaffold0129; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 19 - 87
Target Start/End: Original strand, 19784 - 19851
Alignment:
Q  19 aattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    ||||||||| |||||| |||||||  || |||||||||||||||||||||||| | |||||||||||||    
T  19784 aattcacctcaaagtatttgaattttcttaaaacattacattccctcaaaaca-tcccccatccaaaca 19851  T

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Target: scaffold0301 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 9 - 87
Target Start/End: Complemental strand, 7235 - 7157
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaaca 87  Q
    |||||||| ||||||||   |||||| ||||||||||| |||||| ||||||||||||||||||| | |||||||||||    
T  7235 caaacaatggaattcactccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaaca 7157  T

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Target: scaffold0337 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 95
Target Start/End: Original strand, 15855 - 15938
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactctta 95  Q
    |||||||| ||||||||||  ||||| |||||||| |||| | |||||||||||| ||||||| | ||||||||||||| |||||||    
T  15855 caaacaatggaattcacct--aagtatttgaattctctcatagcattacattccc-caaaacaatcccccatccaaacacactctta 15938  T

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Target: scaffold0065 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 95
Target Start/End: Original strand, 2897 - 2980
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacagactctta 95  Q
    |||||||| ||||||||||  ||||| |||||||| |||| | |||||||||||| ||||||| | ||||||||||||| |||||||    
T  2897 caaacaatggaattcacct--aagtatttgaattctctcatagcattacattccc-caaaacaatcccccatccaaacacactctta 2980  T

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Target: scaffold0002 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 59
Target Start/End: Complemental strand, 130438 - 130388
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacat 59  Q
    ||||||||||||| ||||| |||||  ||||||||||||||||||||||||    
T  130438 caaacaatagaatccacctaaaagtctttgaattccctcaaaacattacat 130388  T

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Target: scaffold0240 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 55
Target Start/End: Original strand, 17574 - 17620
Alignment:
Q  9 caaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 55  Q
    ||||||||| ||| ||||| |||| ||||||||||||||||||||||    
T  17574 caaacaataaaatgcacctcaaaggagttgaattccctcaaaacatt 17620  T

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Target: scaffold0039 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 102
Target Start/End: Complemental strand, 109084 - 109040
Alignment:
Q  58 attccctcaaaacatttccccatccaaacagactcttaggatttt 102  Q
    |||||||||||||||| ||||||||||||| ||||| | ||||||    
T  109084 attccctcaaaacattcccccatccaaacacactctaaagatttt 109040  T

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