View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20392_high_22 (Length: 306)
Name: NF20392_high_22
Description: NF20392
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20392_high_22 |
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Alignment Details
Target: chr8 (Bit Score: 263; Significance: 1e-146; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 13 - 293
Target Start/End: Original strand, 43033641 - 43033923
Alignment:
| Q |
13 |
cagagagcaacaatgaatccactatgagcataaacaaaccagtacaataaagtttacatggtcccttgctttccattgttgagaaacagcccaacaaaaa |
112 |
Q |
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| T |
43033641 |
cagagagcaacaatgaatccactatgagcataaacaaaccagtacaataaagtttacatggtcccttgctttccattgttgagaaacagcccaacaaaaa |
43033740 |
T |
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| Q |
113 |
tctctaaatctctttcgacc-tctattttcactcttcctttgatttctcagtctctctaatattcttttgtcatgtagagagtttacatgaattcctcac |
211 |
Q |
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|||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43033741 |
tctctaaatccctttcgaccctctattttcactcttcctttgatttctcagtctctctaatattcttttgtcatgtagagagtttacatgaattcctcac |
43033840 |
T |
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| Q |
212 |
ttcacacctcaaagtgtttcctaagattactccaagattattctcc-aagtctacccacagagatgccctatgattcttacat |
293 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
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| T |
43033841 |
ttcacacctcaaagtgtttcctaagattactccaagattattctccaaagtctacccacagagatgccctatgattcttacat |
43033923 |
T |
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