View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20392_high_25 (Length: 300)

Name: NF20392_high_25
Description: NF20392
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20392_high_25
NF20392_high_25
[»] chr1 (22 HSPs)
chr1 (84-236)||(39776560-39776712)
chr1 (41-86)||(23536065-23536110)
chr1 (40-84)||(24273249-24273293)
chr1 (41-88)||(8224764-8224811)
chr1 (41-84)||(15034775-15034818)
chr1 (41-88)||(27935601-27935648)
chr1 (41-84)||(30190252-30190295)
chr1 (41-88)||(43623008-43623055)
chr1 (41-86)||(4038073-4038118)
chr1 (41-86)||(15034657-15034702)
chr1 (49-90)||(15245454-15245495)
chr1 (41-86)||(26501109-26501154)
chr1 (41-78)||(34756433-34756470)
chr1 (44-87)||(5474414-5474457)
chr1 (49-88)||(34007441-34007480)
chr1 (41-84)||(47165242-47165285)
chr1 (40-87)||(49659214-49659260)
chr1 (44-78)||(27804271-27804305)
chr1 (41-86)||(27804381-27804426)
chr1 (41-78)||(45565400-45565437)
chr1 (41-85)||(32287963-32288007)
chr1 (49-89)||(32572935-32572975)
[»] chr7 (23 HSPs)
chr7 (104-236)||(44207967-44208099)
chr7 (40-92)||(31632714-31632766)
chr7 (41-88)||(40110854-40110901)
chr7 (44-90)||(40854089-40854135)
chr7 (41-87)||(43955514-43955560)
chr7 (41-78)||(21636001-21636038)
chr7 (41-86)||(40110735-40110780)
chr7 (40-84)||(26162152-26162196)
chr7 (41-84)||(34398965-34399008)
chr7 (40-87)||(35776970-35777017)
chr7 (41-87)||(2057392-2057438)
chr7 (41-87)||(14603278-14603324)
chr7 (41-86)||(39342658-39342703)
chr7 (41-78)||(43955630-43955667)
chr7 (41-84)||(6498781-6498824)
chr7 (41-84)||(28539184-28539227)
chr7 (41-84)||(35455804-35455847)
chr7 (41-87)||(5644674-5644720)
chr7 (40-86)||(29639230-29639276)
chr7 (41-87)||(34388262-34388308)
chr7 (41-86)||(29065817-29065862)
chr7 (41-78)||(30629063-30629100)
chr7 (49-86)||(31913234-31913271)
[»] chr4 (20 HSPs)
chr4 (41-89)||(7352928-7352976)
chr4 (41-94)||(1112595-1112648)
chr4 (41-84)||(857355-857398)
chr4 (40-84)||(31473849-31473893)
chr4 (41-84)||(28845987-28846030)
chr4 (41-84)||(49111428-49111471)
chr4 (41-87)||(4896748-4896794)
chr4 (40-78)||(10633038-10633076)
chr4 (41-78)||(7352818-7352855)
chr4 (41-85)||(31742880-31742924)
chr4 (41-84)||(14982280-14982323)
chr4 (41-84)||(15660299-15660342)
chr4 (41-84)||(16516171-16516214)
chr4 (41-84)||(36455907-36455950)
chr4 (44-87)||(36456045-36456088)
chr4 (41-83)||(4441338-4441380)
chr4 (41-78)||(28845877-28845914)
chr4 (41-86)||(41498606-41498651)
chr4 (41-78)||(42542983-42543020)
chr4 (41-78)||(42844659-42844696)
[»] chr8 (26 HSPs)
chr8 (41-87)||(17110866-17110912)
chr8 (41-84)||(3853616-3853659)
chr8 (41-84)||(3858074-3858117)
chr8 (41-84)||(17110985-17111028)
chr8 (41-88)||(36103097-36103144)
chr8 (49-90)||(14799973-14800014)
chr8 (41-86)||(14991690-14991735)
chr8 (41-86)||(27322689-27322734)
chr8 (41-78)||(30435252-30435289)
chr8 (41-86)||(42711396-42711441)
chr8 (49-89)||(33377345-33377385)
chr8 (41-88)||(14235-14281)
chr8 (41-84)||(24044960-24045003)
chr8 (41-84)||(28324702-28324745)
chr8 (41-84)||(29257391-29257434)
chr8 (49-84)||(30435350-30435385)
chr8 (41-84)||(33902667-33902710)
chr8 (41-88)||(40046800-40046847)
chr8 (40-86)||(23011732-23011778)
chr8 (41-87)||(32626074-32626120)
chr8 (41-78)||(3853732-3853769)
chr8 (41-78)||(3858190-3858227)
chr8 (41-78)||(8689138-8689175)
chr8 (41-78)||(13404833-13404870)
chr8 (41-78)||(44346718-44346755)
chr8 (53-93)||(42711295-42711335)
[»] chr5 (34 HSPs)
chr5 (40-94)||(25935316-25935370)
chr5 (41-89)||(40643933-40643981)
chr5 (41-88)||(5658772-5658819)
chr5 (41-87)||(927299-927345)
chr5 (41-86)||(15374076-15374121)
chr5 (41-78)||(15804410-15804447)
chr5 (41-94)||(32470872-32470925)
chr5 (41-89)||(41762242-41762290)
chr5 (41-84)||(22303897-22303940)
chr5 (41-88)||(40809337-40809384)
chr5 (41-92)||(40809457-40809508)
chr5 (44-86)||(2316376-2316418)
chr5 (40-78)||(9894348-9894386)
chr5 (41-87)||(40090441-40090487)
chr5 (41-78)||(2721587-2721624)
chr5 (41-78)||(28828373-28828410)
chr5 (40-77)||(37145527-37145564)
chr5 (49-88)||(2550324-2550363)
chr5 (41-84)||(9764454-9764497)
chr5 (41-84)||(15804322-15804365)
chr5 (41-84)||(22766952-22766995)
chr5 (41-84)||(26281296-26281339)
chr5 (41-88)||(33245399-33245446)
chr5 (41-84)||(37722921-37722964)
chr5 (41-83)||(3563278-3563320)
chr5 (41-87)||(9764335-9764381)
chr5 (40-78)||(19533933-19533971)
chr5 (41-83)||(20523249-20523291)
chr5 (49-87)||(22305109-22305147)
chr5 (46-88)||(34982212-34982254)
chr5 (41-86)||(23092078-23092123)
chr5 (41-78)||(28828463-28828500)
chr5 (41-86)||(32250125-32250169)
chr5 (44-84)||(20523133-20523173)
[»] chr3 (23 HSPs)
chr3 (41-94)||(49457333-49457386)
chr3 (41-88)||(42005982-42006029)
chr3 (41-88)||(44436254-44436301)
chr3 (41-90)||(35279931-35279980)
chr3 (41-102)||(44692938-44692999)
chr3 (41-88)||(27252010-27252057)
chr3 (41-84)||(46672832-46672875)
chr3 (41-84)||(47767432-47767475)
chr3 (41-87)||(34088568-34088614)
chr3 (41-86)||(9129460-9129505)
chr3 (41-86)||(9137567-9137612)
chr3 (41-84)||(2732639-2732682)
chr3 (49-84)||(25655315-25655350)
chr3 (41-84)||(36398018-36398061)
chr3 (41-84)||(37054394-37054437)
chr3 (41-84)||(44692822-44692865)
chr3 (49-87)||(25655403-25655441)
chr3 (41-87)||(53129872-53129918)
chr3 (41-86)||(7302344-7302389)
chr3 (41-78)||(21307561-21307598)
chr3 (41-85)||(5415782-5415826)
chr3 (40-76)||(19475824-19475860)
chr3 (40-76)||(30767112-30767148)
[»] chr6 (14 HSPs)
chr6 (41-89)||(8574781-8574829)
chr6 (41-88)||(6919823-6919870)
chr6 (41-84)||(8574695-8574738)
chr6 (41-84)||(9285647-9285690)
chr6 (41-87)||(776196-776242)
chr6 (49-87)||(8475176-8475214)
chr6 (41-87)||(28918162-28918208)
chr6 (41-78)||(9763018-9763055)
chr6 (44-84)||(33733432-33733472)
chr6 (41-93)||(34245010-34245062)
chr6 (41-84)||(776080-776123)
chr6 (51-92)||(1195343-1195384)
chr6 (41-78)||(15299541-15299577)
chr6 (40-84)||(13487275-13487319)
[»] chr2 (25 HSPs)
chr2 (40-87)||(10480116-10480163)
chr2 (41-86)||(7228042-7228087)
chr2 (41-86)||(14365698-14365743)
chr2 (41-85)||(14537198-14537242)
chr2 (41-92)||(33189287-33189338)
chr2 (41-84)||(41461631-41461674)
chr2 (41-87)||(784790-784836)
chr2 (41-87)||(11684596-11684642)
chr2 (41-86)||(769034-769079)
chr2 (41-86)||(11141303-11141348)
chr2 (41-86)||(17180295-17180340)
chr2 (41-86)||(27033488-27033533)
chr2 (41-78)||(28740602-28740639)
chr2 (44-84)||(13017779-13017819)
chr2 (41-84)||(1583839-1583882)
chr2 (41-76)||(11716515-11716550)
chr2 (41-84)||(14365815-14365858)
chr2 (41-76)||(30698289-30698324)
chr2 (40-78)||(11793901-11793939)
chr2 (41-87)||(41461512-41461558)
chr2 (49-87)||(41585710-41585748)
chr2 (49-78)||(3345852-3345881)
chr2 (41-86)||(39630223-39630268)
chr2 (49-78)||(44205678-44205707)
chr2 (40-84)||(8735844-8735888)
[»] scaffold1562 (1 HSPs)
scaffold1562 (41-78)||(521-558)
[»] scaffold1158 (1 HSPs)
scaffold1158 (41-78)||(2035-2072)
[»] scaffold0009 (1 HSPs)
scaffold0009 (41-86)||(42094-42139)
[»] scaffold0048 (1 HSPs)
scaffold0048 (41-78)||(82949-82986)
[»] scaffold0039 (1 HSPs)
scaffold0039 (49-93)||(109040-109084)


Alignment Details
Target: chr1 (Bit Score: 149; Significance: 1e-78; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 84 - 236
Target Start/End: Original strand, 39776560 - 39776712
Alignment:
Q  84 ttaggatttttctaaaatattaccttccatccatgccaagaattgtgagtgtattcttttggtcaccaaatgcaacagtgtaacgacagtgttcatgcaa 183  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39776560 ttaggatttttctaaaatattaccttccatccatgccaagaattgtgagtgtattcttttggtcaccaaatgcaacagtgtaacgacagtgttcatgcaa 39776659  T
Q  184 gcgaaactgagcaaatgaccactctgaattgaaatactttggcaacactcctg 236  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39776660 gtgaaactgagcaaatgaccactctgaattgaaatactttggcaacactcctg 39776712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 86
Target Start/End: Complemental strand, 23536110 - 23536065
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaacagactctta 86  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||    
T  23536110 aacattacattccctcaaaacattcccccatccaaacacactctta 23536065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 40 - 84
Target Start/End: Original strand, 24273249 - 24273293
Alignment:
Q  40 taacattacattccctcaaaacatttccccatccaaacagactct 84  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||    
T  24273249 taacattacattccctcaaaacattcccccatccaaacacactct 24273293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 41 - 88
Target Start/End: Complemental strand, 8224811 - 8224764
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaacagactcttagg 88  Q
    |||||||||||||||||||||||| || |||||||||| |||||||||    
T  8224811 aacattacattccctcaaaacattccctcatccaaacacactcttagg 8224764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 41 - 84
Target Start/End: Original strand, 15034775 - 15034818
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaacagactct 84  Q
    |||||||||||||||||||||||| ||||||||||||| |||||    
T  15034775 aacattacattccctcaaaacattcccccatccaaacacactct 15034818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 41 - 88
Target Start/End: Original strand, 27935601 - 27935648
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaacagactcttagg 88  Q
    |||||||||||||||||||| ||||| ||||||||||| |||||||||    
T  27935601 aacattacattccctcaaaatatttctccatccaaacacactcttagg 27935648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 41 - 84
Target Start/End: Original strand, 30190252 - 30190295
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaacagactct 84  Q
    |||||||||||||||||||||||| ||||||||||||| |||||    
T  30190252 aacattacattccctcaaaacattcccccatccaaacacactct 30190295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 41 - 88
Target Start/End: Original strand, 43623008 - 43623055
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaacagactcttagg 88  Q
    ||||||||||||| |||||||||| ||||||||||||| |||||||||    
T  43623008 aacattacattccatcaaaacattcccccatccaaacacactcttagg 43623055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 41 - 86
Target Start/End: Complemental strand, 4038118 - 4038073
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaacagactctta 86  Q
    |||||||||||||||||||||||| ||||| ||||||| |||||||    
T  4038118 aacattacattccctcaaaacattcccccacccaaacacactctta 4038073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 41 - 86
Target Start/End: Complemental strand, 15034702 - 15034657
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaacagactctta 86  Q
    |||||||||||||||||||||||| | ||||||||||| |||||||    
T  15034702 aacattacattccctcaaaacattcctccatccaaacacactctta 15034657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 49 - 90
Target Start/End: Complemental strand, 15245495 - 15245454
Alignment:
Q  49 attccctcaaaacatttccccatccaaacagactcttaggat 90  Q
    |||||||||||||||| ||||||||||||| |||||||||||    
T  15245495 attccctcaaaacattcccccatccaaacacactcttaggat 15245454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 41 - 86
Target Start/End: Original strand, 26501109 - 26501154
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaacagactctta 86  Q
    |||||||||||||||||||||||| | ||||||||||| |||||||    
T  26501109 aacattacattccctcaaaacattcctccatccaaacacactctta 26501154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 41 - 78
Target Start/End: Complemental strand, 34756470 - 34756433
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaaca 78  Q
    |||||||||||||||||||||||| |||||||||||||    
T  34756470 aacattacattccctcaaaacattcccccatccaaaca 34756433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 44 - 87
Target Start/End: Complemental strand, 5474457 - 5474414
Alignment:
Q  44 attacattccctcaaaacatttccccatccaaacagactcttag 87  Q
    |||| |||||||||||||||| ||||||||||||| ||||||||    
T  5474457 attaaattccctcaaaacattcccccatccaaacacactcttag 5474414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 49 - 88
Target Start/End: Original strand, 34007441 - 34007480
Alignment:
Q  49 attccctcaaaacatttccccatccaaacagactcttagg 88  Q
    |||||||||||| ||||||||||||||||| |||||||||    
T  34007441 attccctcaaaatatttccccatccaaacacactcttagg 34007480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 41 - 84
Target Start/End: Original strand, 47165242 - 47165285
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaacagactct 84  Q
    ||||||||||| |||||||||||||| ||||||||||| |||||    
T  47165242 aacattacatttcctcaaaacatttctccatccaaacacactct 47165285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 40 - 87
Target Start/End: Complemental strand, 49659260 - 49659214
Alignment:
Q  40 taacattacattccctcaaaacatttccccatccaaacagactcttag 87  Q
    ||||||||||||||||||| ||| ||||||||||||||| ||||||||    
T  49659260 taacattacattccctcaataca-ttccccatccaaacacactcttag 49659214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 78
Target Start/End: Complemental strand, 27804305 - 27804271
Alignment:
Q  44 attacattccctcaaaacatttccccatccaaaca 78  Q
    ||||||||||||||||||||| |||||||||||||    
T  27804305 attacattccctcaaaacattcccccatccaaaca 27804271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 86
Target Start/End: Original strand, 27804381 - 27804426
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaacagactctta 86  Q
    ||||||||||| |||||||||||| | ||||||||||| |||||||    
T  27804381 aacattacatttcctcaaaacattcctccatccaaacacactctta 27804426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 78
Target Start/End: Complemental strand, 45565437 - 45565400
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaaca 78  Q
    |||||||||||| ||||||||||| |||||||||||||    
T  45565437 aacattacattctctcaaaacattcccccatccaaaca 45565400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 85
Target Start/End: Original strand, 32287963 - 32288007
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaacagactctt 85  Q
    ||||||||||||||||||||| || | ||||||||||| ||||||    
T  32287963 aacattacattccctcaaaactttcctccatccaaacacactctt 32288007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 49 - 89
Target Start/End: Complemental strand, 32572975 - 32572935
Alignment:
Q  49 attccctcaaaacatttccccatccaaacagactcttagga 89  Q
    |||||||||||||||| ||||||||||||| ||||| ||||    
T  32572975 attccctcaaaacattcccccatccaaacacactctaagga 32572935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 61; Significance: 3e-26; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 104 - 236
Target Start/End: Complemental strand, 44208099 - 44207967
Alignment:
Q  104 taccttccatccatgccaagaattgtgagtgtattcttttggtcaccaaatgcaacagtgtaacgacagtgttcatgcaagcgaaactgagcaaatgacc 203  Q
    |||||||||||||||||||||||| ||| ||||||||||||  ||||||| ||||| |||||  ||      ||||||||| ||||| |||||| |||||    
T  44208099 taccttccatccatgccaagaattatgactgtattcttttgtacaccaaaagcaactgtgtactgagtaccctcatgcaagtgaaaccgagcaactgacc 44208000  T
Q  204 actctgaattgaaatactttggcaacactcctg 236  Q
    ||||||||||||||||||| |||||||||||||    
T  44207999 actctgaattgaaatacttgggcaacactcctg 44207967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 40 - 92
Target Start/End: Complemental strand, 31632766 - 31632714
Alignment:
Q  40 taacattacattccctcaaaacatttccccatccaaacagactcttaggattt 92  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||||| ||||    
T  31632766 taacattacattccctcaaaacattcccccatccaaacacactcttagaattt 31632714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 41 - 88
Target Start/End: Original strand, 40110854 - 40110901
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaacagactcttagg 88  Q
    |||||||||||||||| ||||||||||||||||||||| |||||||||    
T  40110854 aacattacattccctcgaaacatttccccatccaaacacactcttagg 40110901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 44 - 90
Target Start/End: Original strand, 40854089 - 40854135
Alignment:
Q  44 attacattccctcaaaacatttccccatccaaacagactcttaggat 90  Q
    |||||||||||||| |||||||||||||||||||| |||||||||||    
T  40854089 attacattccctcagaacatttccccatccaaacacactcttaggat 40854135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 41 - 87
Target Start/End: Complemental strand, 43955560 - 43955514
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaacagactcttag 87  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||    
T  43955560 aacattacattccctcaaaacattcccccatccaaacacactcttag 43955514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 78
Target Start/End: Original strand, 21636001 - 21636038
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaaca 78  Q
    ||||||||||||||||||||||||||||||||||||||    
T  21636001 aacattacattccctcaaaacatttccccatccaaaca 21636038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 86
Target Start/End: Complemental strand, 40110780 - 40110735
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaacagactctta 86  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||    
T  40110780 aacattacattccctcaaaacattcccccatccaaacacactctta 40110735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 40 - 84
Target Start/End: Original strand, 26162152 - 26162196
Alignment:
Q  40 taacattacattccctcaaaacatttccccatccaaacagactct 84  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||    
T  26162152 taacattacattccctcaaaacattcccccatccaaacacactct 26162196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 41 - 84
Target Start/End: Original strand, 34398965 - 34399008
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaacagactct 84  Q
    |||||||||||||||||||||||| ||||||||||||| |||||    
T  34398965 aacattacattccctcaaaacattcccccatccaaacacactct 34399008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 40 - 87
Target Start/End: Original strand, 35776970 - 35777017
Alignment:
Q  40 taacattacattccctcaaaacatttccccatccaaacagactcttag 87  Q
    ||||||||||||||||||||||||| || |||||||||| ||||||||    
T  35776970 taacattacattccctcaaaacattccctcatccaaacacactcttag 35777017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 87
Target Start/End: Complemental strand, 2057438 - 2057392
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaacagactcttag 87  Q
    |||||||||||| ||||||||||| ||||||||||||| ||||||||    
T  2057438 aacattacattcgctcaaaacattcccccatccaaacacactcttag 2057392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 87
Target Start/End: Original strand, 14603278 - 14603324
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaacagactcttag 87  Q
    |||| ||||||||||||||||||| ||||||||||||| ||||||||    
T  14603278 aacaatacattccctcaaaacattcccccatccaaacacactcttag 14603324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 41 - 86
Target Start/End: Original strand, 39342658 - 39342703
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaacagactctta 86  Q
    |||| ||||||||||||||||||| ||||||||||||| |||||||    
T  39342658 aacaatacattccctcaaaacattcccccatccaaacacactctta 39342703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 41 - 78
Target Start/End: Original strand, 43955630 - 43955667
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaaca 78  Q
    |||||||||||||||||||||||| |||||||||||||    
T  43955630 aacattacattccctcaaaacattcccccatccaaaca 43955667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 41 - 84
Target Start/End: Original strand, 6498781 - 6498824
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaacagactct 84  Q
    |||||||||||||||||||||||| | ||||||||||| |||||    
T  6498781 aacattacattccctcaaaacattcctccatccaaacacactct 6498824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 41 - 84
Target Start/End: Original strand, 28539184 - 28539227
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaacagactct 84  Q
    |||| ||||||||||||||||||| ||||||||||||| |||||    
T  28539184 aacaatacattccctcaaaacattcccccatccaaacacactct 28539227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 41 - 84
Target Start/End: Complemental strand, 35455847 - 35455804
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaacagactct 84  Q
    |||| ||||||||||||||||||| ||||||||||||| |||||    
T  35455847 aacaatacattccctcaaaacattcccccatccaaacacactct 35455804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 87
Target Start/End: Complemental strand, 5644720 - 5644674
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaacagactcttag 87  Q
    |||||||||||||||||||||||| | |||| |||||| ||||||||    
T  5644720 aacattacattccctcaaaacattcctccattcaaacacactcttag 5644674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 86
Target Start/End: Original strand, 29639230 - 29639276
Alignment:
Q  40 taacattacattccctcaaaacatttccccatccaaacagactctta 86  Q
    |||||||||||||||| |||||||| ||||||||| ||| |||||||    
T  29639230 taacattacattccctgaaaacattcccccatccatacacactctta 29639276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 87
Target Start/End: Complemental strand, 34388308 - 34388262
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaacagactcttag 87  Q
    |||||||| || |||||||| ||||||||||||||||| ||||||||    
T  34388308 aacattacttttcctcaaaatatttccccatccaaacacactcttag 34388262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 86
Target Start/End: Complemental strand, 29065862 - 29065817
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaacagactctta 86  Q
    ||||||||||||||||||||||||   ||||||||||| |||||||    
T  29065862 aacattacattccctcaaaacattcatccatccaaacacactctta 29065817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 78
Target Start/End: Complemental strand, 30629100 - 30629063
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaaca 78  Q
    |||| ||||||||||||||||||| |||||||||||||    
T  30629100 aacaatacattccctcaaaacattcccccatccaaaca 30629063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 86
Target Start/End: Complemental strand, 31913271 - 31913234
Alignment:
Q  49 attccctcaaaacatttccccatccaaacagactctta 86  Q
    |||||||||||||||| ||||||||||||| |||||||    
T  31913271 attccctcaaaacattcccccatccaaacacactctta 31913234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 45; Significance: 1e-16; HSPs: 20)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 41 - 89
Target Start/End: Original strand, 7352928 - 7352976
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaacagactcttagga 89  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  7352928 aacattacattccctcaaaacatttccccatccaaacacactcttagga 7352976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 41 - 94
Target Start/End: Complemental strand, 1112648 - 1112595
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaacagactcttaggattttt 94  Q
    ||||||||||| |||||||||||| ||||||||||||| |||||||||||||||    
T  1112648 aacattacatttcctcaaaacattcccccatccaaacacactcttaggattttt 1112595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 41 - 84
Target Start/End: Original strand, 857355 - 857398
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaacagactct 84  Q
    |||||||||||||||||||||||||||||||||||||| |||||    
T  857355 aacattacattccctcaaaacatttccccatccaaacacactct 857398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 40 - 84
Target Start/End: Complemental strand, 31473893 - 31473849
Alignment:
Q  40 taacattacattccctcaaaacatttccccatccaaacagactct 84  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||    
T  31473893 taacattacattccctcaaaacattcccccatccaaacacactct 31473849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 41 - 84
Target Start/End: Original strand, 28845987 - 28846030
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaacagactct 84  Q
    ||||||| |||||||||||||||||||||||||||||| |||||    
T  28845987 aacattatattccctcaaaacatttccccatccaaacacactct 28846030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 41 - 84
Target Start/End: Original strand, 49111428 - 49111471
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaacagactct 84  Q
    |||||||||||||||||||||||| ||||||||||||| |||||    
T  49111428 aacattacattccctcaaaacattcccccatccaaacacactct 49111471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 87
Target Start/End: Original strand, 4896748 - 4896794
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaacagactcttag 87  Q
    |||||||||||||||||||| ||||||||||||||||| ||| ||||    
T  4896748 aacattacattccctcaaaatatttccccatccaaacacactattag 4896794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 40 - 78
Target Start/End: Complemental strand, 10633076 - 10633038
Alignment:
Q  40 taacattacattccctcaaaacatttccccatccaaaca 78  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  10633076 taacattacattccctcaaaacattcccccatccaaaca 10633038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 41 - 78
Target Start/End: Complemental strand, 7352855 - 7352818
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaaca 78  Q
    |||||||||||||||||||||||| |||||||||||||    
T  7352855 aacattacattccctcaaaacattcccccatccaaaca 7352818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 85
Target Start/End: Original strand, 31742880 - 31742924
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaacagactctt 85  Q
    |||||||||||||||||||||||| | ||||||||||| ||||||    
T  31742880 aacattacattccctcaaaacattcctccatccaaacacactctt 31742924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 41 - 84
Target Start/End: Complemental strand, 14982323 - 14982280
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaacagactct 84  Q
    |||||||||||||||||||||||| | ||||||||||| |||||    
T  14982323 aacattacattccctcaaaacattcctccatccaaacacactct 14982280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 41 - 84
Target Start/End: Original strand, 15660299 - 15660342
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaacagactct 84  Q
    |||||||||||||||||||||||| || |||||||||| |||||    
T  15660299 aacattacattccctcaaaacattccctcatccaaacacactct 15660342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 41 - 84
Target Start/End: Complemental strand, 16516214 - 16516171
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaacagactct 84  Q
    ||||||||||||| |||||||||| ||||||||||||| |||||    
T  16516214 aacattacattccgtcaaaacattcccccatccaaacacactct 16516171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 41 - 84
Target Start/End: Complemental strand, 36455950 - 36455907
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaacagactct 84  Q
    ||||||| |||||||||||||||| ||||||||||||| |||||    
T  36455950 aacattagattccctcaaaacattcccccatccaaacacactct 36455907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 44 - 87
Target Start/End: Original strand, 36456045 - 36456088
Alignment:
Q  44 attacattccctcaaaacatttccccatccaaacagactcttag 87  Q
    ||||||||||||||||||||| | ||||||||||| ||||||||    
T  36456045 attacattccctcaaaacattcctccatccaaacacactcttag 36456088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 83
Target Start/End: Complemental strand, 4441380 - 4441338
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaacagactc 83  Q
    |||||||||||||||||||||||| | ||||||||||| ||||    
T  4441380 aacattacattccctcaaaacattccaccatccaaacacactc 4441338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 78
Target Start/End: Complemental strand, 28845914 - 28845877
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaaca 78  Q
    |||||||||||||||||||||||| | |||||||||||    
T  28845914 aacattacattccctcaaaacattcctccatccaaaca 28845877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 86
Target Start/End: Original strand, 41498606 - 41498651
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaacagactctta 86  Q
    |||||||||||||||||||| ||| | ||||||||||| |||||||    
T  41498606 aacattacattccctcaaaatattcctccatccaaacacactctta 41498651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 78
Target Start/End: Original strand, 42542983 - 42543020
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaaca 78  Q
    |||||||||||||||||||||||| | |||||||||||    
T  42542983 aacattacattccctcaaaacattccaccatccaaaca 42543020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 78
Target Start/End: Original strand, 42844659 - 42844696
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaaca 78  Q
    ||||||||||| |||||||| |||||||||||||||||    
T  42844659 aacattacattacctcaaaatatttccccatccaaaca 42844696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 41 - 87
Target Start/End: Complemental strand, 17110912 - 17110866
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaacagactcttag 87  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||    
T  17110912 aacattacattccctcaaaacatttccccatccaaacacactcttag 17110866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 41 - 84
Target Start/End: Complemental strand, 3853659 - 3853616
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaacagactct 84  Q
    |||||||||||||||||||||||| ||||||||||||| |||||    
T  3853659 aacattacattccctcaaaacattcccccatccaaacacactct 3853616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 41 - 84
Target Start/End: Complemental strand, 3858117 - 3858074
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaacagactct 84  Q
    |||||||||||||||||||||||| ||||||||||||| |||||    
T  3858117 aacattacattccctcaaaacattcccccatccaaacacactct 3858074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 41 - 84
Target Start/End: Original strand, 17110985 - 17111028
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaacagactct 84  Q
    |||||||||||||||||||||||||| ||||||||||| |||||    
T  17110985 aacattacattccctcaaaacatttctccatccaaacacactct 17111028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 41 - 88
Target Start/End: Complemental strand, 36103144 - 36103097
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaacagactcttagg 88  Q
    |||||||||||||||||||||||| | ||||||||||| |||||||||    
T  36103144 aacattacattccctcaaaacattcctccatccaaacacactcttagg 36103097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 49 - 90
Target Start/End: Complemental strand, 14800014 - 14799973
Alignment:
Q  49 attccctcaaaacatttccccatccaaacagactcttaggat 90  Q
    |||||||||||||||| ||||||||||||| |||||||||||    
T  14800014 attccctcaaaacattcccccatccaaacacactcttaggat 14799973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 41 - 86
Target Start/End: Complemental strand, 14991735 - 14991690
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaacagactctta 86  Q
    ||||||||||| |||||||||||| ||||||||||||| |||||||    
T  14991735 aacattacattacctcaaaacattcccccatccaaacacactctta 14991690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 41 - 86
Target Start/End: Original strand, 27322689 - 27322734
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaacagactctta 86  Q
    ||||||||||||||||||||||||  |||||||||||| |||||||    
T  27322689 aacattacattccctcaaaacattctcccatccaaacacactctta 27322734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 41 - 78
Target Start/End: Complemental strand, 30435289 - 30435252
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaaca 78  Q
    |||||||||||||||||||||||||| |||||||||||    
T  30435289 aacattacattccctcaaaacatttctccatccaaaca 30435252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 41 - 86
Target Start/End: Original strand, 42711396 - 42711441
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaacagactctta 86  Q
    |||||||||||||||||||||||| ||| ||||||||| |||||||    
T  42711396 aacattacattccctcaaaacattccccaatccaaacacactctta 42711441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 89
Target Start/End: Original strand, 33377345 - 33377385
Alignment:
Q  49 attccctcaaaacatttccccatccaaacagactcttagga 89  Q
    |||||||||||||||| ||||||||||||| ||||||||||    
T  33377345 attccctcaaaacattcccccatccaaacacactcttagga 33377385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 41 - 88
Target Start/End: Complemental strand, 14281 - 14235
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaacagactcttagg 88  Q
    |||||||||||||||| ||||||| ||||||||||||| |||||||||    
T  14281 aacattacattccctccaaacatt-ccccatccaaacacactcttagg 14235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 41 - 84
Target Start/End: Complemental strand, 24045003 - 24044960
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaacagactct 84  Q
    |||||||||||||||||||||||| || |||||||||| |||||    
T  24045003 aacattacattccctcaaaacattccctcatccaaacacactct 24044960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 41 - 84
Target Start/End: Original strand, 28324702 - 28324745
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaacagactct 84  Q
    |||||||||||||||||||||||| | ||||||||||| |||||    
T  28324702 aacattacattccctcaaaacattcctccatccaaacacactct 28324745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 41 - 84
Target Start/End: Original strand, 29257391 - 29257434
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaacagactct 84  Q
    |||| ||||||||||||||||||| ||||||||||||| |||||    
T  29257391 aacaatacattccctcaaaacattcccccatccaaacacactct 29257434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 49 - 84
Target Start/End: Original strand, 30435350 - 30435385
Alignment:
Q  49 attccctcaaaacatttccccatccaaacagactct 84  Q
    |||||||||||||||||||||||||||||| |||||    
T  30435350 attccctcaaaacatttccccatccaaacacactct 30435385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 41 - 84
Target Start/End: Complemental strand, 33902710 - 33902667
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaacagactct 84  Q
    |||||||||||||||||||||||| | ||||||||||| |||||    
T  33902710 aacattacattccctcaaaacattcctccatccaaacacactct 33902667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 41 - 88
Target Start/End: Complemental strand, 40046847 - 40046800
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaacagactcttagg 88  Q
    ||||||||||||||||||||||||   ||||||||||| |||||||||    
T  40046847 aacattacattccctcaaaacattcatccatccaaacacactcttagg 40046800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 86
Target Start/End: Complemental strand, 23011778 - 23011732
Alignment:
Q  40 taacattacattccctcaaaacatttccccatccaaacagactctta 86  Q
    |||||||||||||||||||||||||  ||| |||||||| |||||||    
T  23011778 taacattacattccctcaaaacattctcccgtccaaacacactctta 23011732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 87
Target Start/End: Original strand, 32626074 - 32626120
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaacagactcttag 87  Q
    |||||||||||||||||||| ||| |||||||||| || ||||||||    
T  32626074 aacattacattccctcaaaagattcccccatccaagcacactcttag 32626120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 78
Target Start/End: Original strand, 3853732 - 3853769
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaaca 78  Q
    ||||||||||| |||||||| |||||||||||||||||    
T  3853732 aacattacattacctcaaaatatttccccatccaaaca 3853769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 78
Target Start/End: Original strand, 3858190 - 3858227
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaaca 78  Q
    ||||||||||| |||||||| |||||||||||||||||    
T  3858190 aacattacattacctcaaaatatttccccatccaaaca 3858227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 78
Target Start/End: Complemental strand, 8689175 - 8689138
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaaca 78  Q
    ||||||||||||| |||||||||||| |||||||||||    
T  8689175 aacattacattccttcaaaacatttctccatccaaaca 8689138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 78
Target Start/End: Complemental strand, 13404870 - 13404833
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaaca 78  Q
    ||||||||||| |||||||| |||||||||||||||||    
T  13404870 aacattacattacctcaaaatatttccccatccaaaca 13404833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 78
Target Start/End: Original strand, 44346718 - 44346755
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaaca 78  Q
    |||| ||||||||||||||||||| |||||||||||||    
T  44346718 aacaatacattccctcaaaacattcccccatccaaaca 44346755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 53 - 93
Target Start/End: Complemental strand, 42711335 - 42711295
Alignment:
Q  53 cctcaaaacatttccccatccaaacagactcttaggatttt 93  Q
    |||||||||||||||||||||||||| ||||| ||| ||||    
T  42711335 cctcaaaacatttccccatccaaacacactctaaggttttt 42711295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 40 - 94
Target Start/End: Original strand, 25935316 - 25935370
Alignment:
Q  40 taacattacattccctcaaaacatttccccatccaaacagactcttaggattttt 94  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||||| ||||||    
T  25935316 taacattacattccctcaaaacattcccccatccaaacacactcttagaattttt 25935370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 41 - 89
Target Start/End: Original strand, 40643933 - 40643981
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaacagactcttagga 89  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  40643933 aacattacattccctcaaaacattcccccatccaaacacactcttagga 40643981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 41 - 88
Target Start/End: Complemental strand, 5658819 - 5658772
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaacagactcttagg 88  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||||    
T  5658819 aacattacattccctcaaaacatttctccatccaaacacactcttagg 5658772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 41 - 87
Target Start/End: Complemental strand, 927345 - 927299
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaacagactcttag 87  Q
    |||| ||||||||||||||||||||||||||||||||| ||||||||    
T  927345 aacaatacattccctcaaaacatttccccatccaaacacactcttag 927299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 86
Target Start/End: Original strand, 15374076 - 15374121
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaacagactctta 86  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||    
T  15374076 aacattacattccctcaaaacattcccccatccaaacacactctta 15374121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 78
Target Start/End: Original strand, 15804410 - 15804447
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaaca 78  Q
    ||||||||||||||||||||||||||||||||||||||    
T  15804410 aacattacattccctcaaaacatttccccatccaaaca 15804447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 94
Target Start/End: Complemental strand, 32470925 - 32470872
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaacagactcttaggattttt 94  Q
    |||||||||||||||||||||||||| ||||||||| | ||||||||| |||||    
T  32470925 aacattacattccctcaaaacatttctccatccaaatacactcttaggcttttt 32470872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 41 - 89
Target Start/End: Original strand, 41762242 - 41762290
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaacagactcttagga 89  Q
    |||| ||||||||||||||||||| ||||||||||||| ||||||||||    
T  41762242 aacaatacattccctcaaaacattcccccatccaaacacactcttagga 41762290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 41 - 84
Target Start/End: Original strand, 22303897 - 22303940
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaacagactct 84  Q
    |||||||||||||||||||||||| ||||||||||||| |||||    
T  22303897 aacattacattccctcaaaacattcccccatccaaacacactct 22303940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 41 - 88
Target Start/End: Complemental strand, 40809384 - 40809337
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaacagactcttagg 88  Q
    ||||||| |||| ||||||||||||||||||||||||| |||||||||    
T  40809384 aacattatattctctcaaaacatttccccatccaaacacactcttagg 40809337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 41 - 92
Target Start/End: Original strand, 40809457 - 40809508
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaacagactcttaggattt 92  Q
    |||||||||||| ||||||||||||||||||| ||||| ||||| |||||||    
T  40809457 aacattacattctctcaaaacatttccccatctaaacacactctaaggattt 40809508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 44 - 86
Target Start/End: Complemental strand, 2316418 - 2316376
Alignment:
Q  44 attacattccctcaaaacatttccccatccaaacagactctta 86  Q
    ||||||||||||||||||||| ||||||||||||| |||||||    
T  2316418 attacattccctcaaaacattcccccatccaaacacactctta 2316376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 40 - 78
Target Start/End: Original strand, 9894348 - 9894386
Alignment:
Q  40 taacattacattccctcaaaacatttccccatccaaaca 78  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  9894348 taacattacattccctcaaaacattcccccatccaaaca 9894386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 87
Target Start/End: Original strand, 40090441 - 40090487
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaacagactcttag 87  Q
    ||||||||||| |||||||||||| ||||||||||||| ||||||||    
T  40090441 aacattacatttcctcaaaacattcccccatccaaacacactcttag 40090487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 41 - 78
Target Start/End: Original strand, 2721587 - 2721624
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaaca 78  Q
    |||||||||||||||||||||||| |||||||||||||    
T  2721587 aacattacattccctcaaaacattcccccatccaaaca 2721624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 41 - 78
Target Start/End: Complemental strand, 28828410 - 28828373
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaaca 78  Q
    |||||||||||||||||||||||| |||||||||||||    
T  28828410 aacattacattccctcaaaacattcccccatccaaaca 28828373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 40 - 77
Target Start/End: Original strand, 37145527 - 37145564
Alignment:
Q  40 taacattacattccctcaaaacatttccccatccaaac 77  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  37145527 taacattacattccctcaaaacattcccccatccaaac 37145564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 49 - 88
Target Start/End: Complemental strand, 2550363 - 2550324
Alignment:
Q  49 attccctcaaaacatttccccatccaaacagactcttagg 88  Q
    |||||||||||||||| ||||||||||||| |||||||||    
T  2550363 attccctcaaaacattcccccatccaaacacactcttagg 2550324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 41 - 84
Target Start/End: Original strand, 9764454 - 9764497
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaacagactct 84  Q
    |||||||||||||||| ||||||| ||||||||||||| |||||    
T  9764454 aacattacattccctcgaaacattcccccatccaaacacactct 9764497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 41 - 84
Target Start/End: Complemental strand, 15804365 - 15804322
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaacagactct 84  Q
    |||| ||||||||||||||||||| ||||||||||||| |||||    
T  15804365 aacactacattccctcaaaacattcccccatccaaacacactct 15804322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 41 - 84
Target Start/End: Complemental strand, 22766995 - 22766952
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaacagactct 84  Q
    ||||||| |||||||||||||||| ||||||||||||| |||||    
T  22766995 aacattatattccctcaaaacattcccccatccaaacacactct 22766952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 41 - 84
Target Start/End: Original strand, 26281296 - 26281339
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaacagactct 84  Q
    ||||||||||||||||||||| || ||||||||||||| |||||    
T  26281296 aacattacattccctcaaaacgttcccccatccaaacacactct 26281339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 41 - 88
Target Start/End: Original strand, 33245399 - 33245446
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaacagactcttagg 88  Q
    ||||||||||||| |||||||||| ||||||||||||| |||| ||||    
T  33245399 aacattacattccatcaaaacattcccccatccaaacacactcatagg 33245446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 41 - 84
Target Start/End: Original strand, 37722921 - 37722964
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaacagactct 84  Q
    |||||||||||||||||||| ||| ||||||||||||| |||||    
T  37722921 aacattacattccctcaaaatattcccccatccaaacacactct 37722964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 83
Target Start/End: Complemental strand, 3563320 - 3563278
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaacagactc 83  Q
    |||||||||||||||||||||||| ||| ||||||||| ||||    
T  3563320 aacattacattccctcaaaacattcccctatccaaacacactc 3563278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 87
Target Start/End: Complemental strand, 9764381 - 9764335
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaacagactcttag 87  Q
    |||||||| ||||||||||| ||| ||||||||||||| ||||||||    
T  9764381 aacattactttccctcaaaatattcccccatccaaacacactcttag 9764335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 78
Target Start/End: Original strand, 19533933 - 19533971
Alignment:
Q  40 taacattacattccctcaaaacatttccccatccaaaca 78  Q
    ||||||||||||||||||||||||| | |||||||||||    
T  19533933 taacattacattccctcaaaacattcctccatccaaaca 19533971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 83
Target Start/End: Original strand, 20523249 - 20523291
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaacagactc 83  Q
    |||||||||||| ||||||||||| ||||||||||||| ||||    
T  20523249 aacattacattctctcaaaacattcccccatccaaacacactc 20523291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 87
Target Start/End: Complemental strand, 22305147 - 22305109
Alignment:
Q  49 attccctcaaaacatttccccatccaaacagactcttag 87  Q
    |||||||||||||||| ||||||||||||| ||||||||    
T  22305147 attccctcaaaacattcccccatccaaacacactcttag 22305109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 88
Target Start/End: Complemental strand, 34982254 - 34982212
Alignment:
Q  46 tacattccctcaaaacatttccccatccaaacagactcttagg 88  Q
    ||||||||||||||||||| ||| ||||||||| |||||||||    
T  34982254 tacattccctcaaaacattcccctatccaaacacactcttagg 34982212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 86
Target Start/End: Original strand, 23092078 - 23092123
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaacagactctta 86  Q
    ||||||||||||  |||||||||| ||||||||||||| |||||||    
T  23092078 aacattacattcgttcaaaacattcccccatccaaacacactctta 23092123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 78
Target Start/End: Original strand, 28828463 - 28828500
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaaca 78  Q
    ||||||||||| |||||||| |||||||||||||||||    
T  28828463 aacattacattacctcaaaatatttccccatccaaaca 28828500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 86
Target Start/End: Original strand, 32250125 - 32250169
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaacagactctta 86  Q
    |||||||| ||||||||||||| ||||||||||||||| |||||||    
T  32250125 aacattactttccctcaaaaca-ttccccatccaaacacactctta 32250169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 84
Target Start/End: Complemental strand, 20523173 - 20523133
Alignment:
Q  44 attacattccctcaaaacatttccccatccaaacagactct 84  Q
    |||||||||||||||||||||  |||||||||||| |||||    
T  20523173 attacattccctcaaaacattctcccatccaaacacactct 20523133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 23)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 41 - 94
Target Start/End: Complemental strand, 49457386 - 49457333
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaacagactcttaggattttt 94  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||| ||||    
T  49457386 aacattacattccctcaaaacattcccccatccaaacacactcttaggaatttt 49457333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 41 - 88
Target Start/End: Original strand, 42005982 - 42006029
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaacagactcttagg 88  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||    
T  42005982 aacattacattccctcaaaacattcccccatccaaacacactcttagg 42006029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 41 - 88
Target Start/End: Complemental strand, 44436301 - 44436254
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaacagactcttagg 88  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||    
T  44436301 aacattacattccctcaaaacattcccccatccaaacacactcttagg 44436254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 90
Target Start/End: Original strand, 35279931 - 35279980
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaacagactcttaggat 90  Q
    |||||||||||||||||||||||| ||||||||||||| | |||||||||    
T  35279931 aacattacattccctcaaaacattcccccatccaaacacattcttaggat 35279980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 102
Target Start/End: Original strand, 44692938 - 44692999
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaacagactcttaggatttttctaaaata 102  Q
    |||||||||||||||||||||||| | ||||||||||| ||||||||| ||| | |||||||    
T  44692938 aacattacattccctcaaaacattcctccatccaaacacactcttagggtttctttaaaata 44692999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 41 - 88
Target Start/End: Original strand, 27252010 - 27252057
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaacagactcttagg 88  Q
    |||||||||||||||||||||||  ||||||||||||| |||||||||    
T  27252010 aacattacattccctcaaaacatccccccatccaaacacactcttagg 27252057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 41 - 84
Target Start/End: Original strand, 46672832 - 46672875
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaacagactct 84  Q
    |||||||||||||||||||||||| ||||||||||||| |||||    
T  46672832 aacattacattccctcaaaacattcccccatccaaacacactct 46672875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 41 - 84
Target Start/End: Complemental strand, 47767475 - 47767432
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaacagactct 84  Q
    |||||||||||||||||||||||| ||||||||||||| |||||    
T  47767475 aacattacattccctcaaaacattcccccatccaaacacactct 47767432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 87
Target Start/End: Complemental strand, 34088614 - 34088568
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaacagactcttag 87  Q
    |||| ||||||||||||||||||||| ||||||||||| ||||||||    
T  34088614 aacaatacattccctcaaaacatttctccatccaaacacactcttag 34088568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 41 - 86
Target Start/End: Original strand, 9129460 - 9129505
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaacagactctta 86  Q
    |||||||||||||||||||||||| || |||||||||| |||||||    
T  9129460 aacattacattccctcaaaacattccctcatccaaacacactctta 9129505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 41 - 86
Target Start/End: Original strand, 9137567 - 9137612
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaacagactctta 86  Q
    |||||||||||||||||||||||| || |||||||||| |||||||    
T  9137567 aacattacattccctcaaaacattccctcatccaaacacactctta 9137612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 41 - 84
Target Start/End: Complemental strand, 2732682 - 2732639
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaacagactct 84  Q
    ||||||| ||| |||||||||||||||||||||||||| |||||    
T  2732682 aacattatattacctcaaaacatttccccatccaaacacactct 2732639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 49 - 84
Target Start/End: Complemental strand, 25655350 - 25655315
Alignment:
Q  49 attccctcaaaacatttccccatccaaacagactct 84  Q
    |||||||||||||||||||||||||||||| |||||    
T  25655350 attccctcaaaacatttccccatccaaacacactct 25655315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 41 - 84
Target Start/End: Original strand, 36398018 - 36398061
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaacagactct 84  Q
    |||| ||||||||||||||||||| ||||||||||||| |||||    
T  36398018 aacaatacattccctcaaaacattcccccatccaaacacactct 36398061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 41 - 84
Target Start/End: Complemental strand, 37054437 - 37054394
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaacagactct 84  Q
    ||||||||||||||| |||||||| ||||||||||||| |||||    
T  37054437 aacattacattcccttaaaacattcccccatccaaacacactct 37054394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 41 - 84
Target Start/End: Complemental strand, 44692865 - 44692822
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaacagactct 84  Q
    |||||||| ||||||||||||||| ||||||||||||| |||||    
T  44692865 aacattactttccctcaaaacattcccccatccaaacacactct 44692822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 87
Target Start/End: Original strand, 25655403 - 25655441
Alignment:
Q  49 attccctcaaaacatttccccatccaaacagactcttag 87  Q
    ||||| |||||||||||||||||||||||| ||||||||    
T  25655403 attccgtcaaaacatttccccatccaaacacactcttag 25655441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 87
Target Start/End: Original strand, 53129872 - 53129918
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaacagactcttag 87  Q
    |||||||||||||||| ||||||| || |||||||||| ||||||||    
T  53129872 aacattacattccctcgaaacattccctcatccaaacacactcttag 53129918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 86
Target Start/End: Complemental strand, 7302389 - 7302344
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaacagactctta 86  Q
    |||||||||||| ||||||||||| || |||||||||| |||||||    
T  7302389 aacattacattctctcaaaacattccctcatccaaacacactctta 7302344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 78
Target Start/End: Original strand, 21307561 - 21307598
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaaca 78  Q
    |||||||||||||| ||||||||| |||||||||||||    
T  21307561 aacattacattcccgcaaaacattcccccatccaaaca 21307598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 85
Target Start/End: Complemental strand, 5415826 - 5415782
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaacagactctt 85  Q
    |||||||||||||||||||| ||| ||| ||||||||| ||||||    
T  5415826 aacattacattccctcaaaatattcccctatccaaacacactctt 5415782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 40 - 76
Target Start/End: Complemental strand, 19475860 - 19475824
Alignment:
Q  40 taacattacattccctcaaaacatttccccatccaaa 76  Q
    ||||||||||||||||||||||||| | |||||||||    
T  19475860 taacattacattccctcaaaacattcctccatccaaa 19475824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 40 - 76
Target Start/End: Complemental strand, 30767148 - 30767112
Alignment:
Q  40 taacattacattccctcaaaacatttccccatccaaa 76  Q
    |||||||| |||||||||||||||| |||||||||||    
T  30767148 taacattagattccctcaaaacattaccccatccaaa 30767112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 41 - 89
Target Start/End: Original strand, 8574781 - 8574829
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaacagactcttagga 89  Q
    |||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  8574781 aacattacattcactcaaaacatttccccatccaaacacactcttagga 8574829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 41 - 88
Target Start/End: Original strand, 6919823 - 6919870
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaacagactcttagg 88  Q
    |||||||| ||||||||||||||| ||||||||||||| |||||||||    
T  6919823 aacattactttccctcaaaacattcccccatccaaacacactcttagg 6919870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 41 - 84
Target Start/End: Complemental strand, 8574738 - 8574695
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaacagactct 84  Q
    |||||||||||| ||||||||||||||||||||||||| |||||    
T  8574738 aacattacattcactcaaaacatttccccatccaaacacactct 8574695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 41 - 84
Target Start/End: Complemental strand, 9285690 - 9285647
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaacagactct 84  Q
    |||||||||||||||||||||||| ||||||||||||| |||||    
T  9285690 aacattacattccctcaaaacattcccccatccaaacacactct 9285647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 87
Target Start/End: Original strand, 776196 - 776242
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaacagactcttag 87  Q
    ||||||||||||||||||||||||| || ||||||||| ||||||||    
T  776196 aacattacattccctcaaaacattttcctatccaaacacactcttag 776242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 49 - 87
Target Start/End: Complemental strand, 8475214 - 8475176
Alignment:
Q  49 attccctcaaaacatttccccatccaaacagactcttag 87  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  8475214 attccctcaaaacatttccccatccaaacacactcttag 8475176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 87
Target Start/End: Complemental strand, 28918208 - 28918162
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaacagactcttag 87  Q
    |||||||||||||||||||||||| | ||||||||||| ||||||||    
T  28918208 aacattacattccctcaaaacattcctccatccaaacacactcttag 28918162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 41 - 78
Target Start/End: Complemental strand, 9763055 - 9763018
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaaca 78  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  9763055 aacattacattccctcaaaacatttccccttccaaaca 9763018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 84
Target Start/End: Complemental strand, 33733472 - 33733432
Alignment:
Q  44 attacattccctcaaaacatttccccatccaaacagactct 84  Q
    ||||||||||||||||||||| ||||||||||||| |||||    
T  33733472 attacattccctcaaaacattcccccatccaaacacactct 33733432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 93
Target Start/End: Original strand, 34245010 - 34245062
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaacagactcttaggatttt 93  Q
    |||||||||||||||||||||||| | ||||||||||| ||||| ||| ||||    
T  34245010 aacattacattccctcaaaacattcctccatccaaacacactctaagggtttt 34245062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 41 - 84
Target Start/End: Complemental strand, 776123 - 776080
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaacagactct 84  Q
    |||||||||||||||||||||||||| ||||| ||||| |||||    
T  776123 aacattacattccctcaaaacatttctccatctaaacacactct 776080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 92
Target Start/End: Complemental strand, 1195384 - 1195343
Alignment:
Q  51 tccctcaaaacatttccccatccaaacagactcttaggattt 92  Q
    |||||||||||||| ||||||||||||| |||||||| ||||    
T  1195384 tccctcaaaacattcccccatccaaacacactcttagtattt 1195343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 78
Target Start/End: Original strand, 15299541 - 15299577
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaaca 78  Q
    |||||||||||||||||||||| |||||||||||||||    
T  15299541 aacattacattccctcaaaaca-ttccccatccaaaca 15299577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 40 - 84
Target Start/End: Complemental strand, 13487319 - 13487275
Alignment:
Q  40 taacattacattccctcaaaacatttccccatccaaacagactct 84  Q
    ||||| ||||||||||||||||||| ||||||| ||||| |||||    
T  13487319 taacactacattccctcaaaacattcccccatctaaacacactct 13487275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 40 - 87
Target Start/End: Complemental strand, 10480163 - 10480116
Alignment:
Q  40 taacattacattccctcaaaacatttccccatccaaacagactcttag 87  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||||||    
T  10480163 taacattacattccctcaaaacattcccccatccaaacacactcttag 10480116  T

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Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 86
Target Start/End: Original strand, 7228042 - 7228087
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaacagactctta 86  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||    
T  7228042 aacattacattctctcaaaacatttccccatccaaacacactctta 7228087  T

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Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 86
Target Start/End: Complemental strand, 14365743 - 14365698
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaacagactctta 86  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||    
T  14365743 aacattacattccctcaaaacattcccccatccaaacacactctta 14365698  T

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Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 41 - 85
Target Start/End: Complemental strand, 14537242 - 14537198
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaacagactctt 85  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||    
T  14537242 aacattacattccctcaaaacattcccccatccaaacacactctt 14537198  T

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Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 41 - 92
Target Start/End: Original strand, 33189287 - 33189338
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaacagactcttaggattt 92  Q
    |||| ||||||||||||||||||| ||||||||||||| |||||||| ||||    
T  33189287 aacaatacattccctcaaaacattcccccatccaaacacactcttagaattt 33189338  T

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Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 41 - 84
Target Start/End: Original strand, 41461631 - 41461674
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaacagactct 84  Q
    |||||||||||||||||||||||| ||||||||||||| |||||    
T  41461631 aacattacattccctcaaaacattcccccatccaaacacactct 41461674  T

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Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 87
Target Start/End: Complemental strand, 784836 - 784790
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaacagactcttag 87  Q
    |||||||||||||||||||||||||  ||||||||||| ||||||||    
T  784836 aacattacattccctcaaaacatttttccatccaaacacactcttag 784790  T

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Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 87
Target Start/End: Complemental strand, 11684642 - 11684596
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaacagactcttag 87  Q
    |||||||||||||||||||||||| ||||||||||||| | ||||||    
T  11684642 aacattacattccctcaaaacattcccccatccaaacacattcttag 11684596  T

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Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 41 - 86
Target Start/End: Complemental strand, 769079 - 769034
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaacagactctta 86  Q
    |||| ||||||||||||||||||| ||||||||||||| |||||||    
T  769079 aacaatacattccctcaaaacattcccccatccaaacacactctta 769034  T

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Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 41 - 86
Target Start/End: Complemental strand, 11141348 - 11141303
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaacagactctta 86  Q
    |||| ||||||||||||||||||| ||||||||||||| |||||||    
T  11141348 aacaatacattccctcaaaacattcccccatccaaacacactctta 11141303  T

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Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 41 - 86
Target Start/End: Complemental strand, 17180340 - 17180295
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaacagactctta 86  Q
    |||||||||||||||||||||||| || |||||||||| |||||||    
T  17180340 aacattacattccctcaaaacattccctcatccaaacacactctta 17180295  T

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Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 41 - 86
Target Start/End: Complemental strand, 27033533 - 27033488
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaacagactctta 86  Q
    |||||||||||| ||||||||||| ||||||||||||| |||||||    
T  27033533 aacattacattctctcaaaacattcccccatccaaacacactctta 27033488  T

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Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 41 - 78
Target Start/End: Complemental strand, 28740639 - 28740602
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaaca 78  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  28740639 aacattacattccctcaaaacatttccccattcaaaca 28740602  T

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Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 84
Target Start/End: Complemental strand, 13017819 - 13017779
Alignment:
Q  44 attacattccctcaaaacatttccccatccaaacagactct 84  Q
    |||||||||||||||||||||||| |||||||||| |||||    
T  13017819 attacattccctcaaaacatttccacatccaaacacactct 13017779  T

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Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 41 - 84
Target Start/End: Original strand, 1583839 - 1583882
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaacagactct 84  Q
    |||| ||||||||||||||||||| ||||||||||||| |||||    
T  1583839 aacaatacattccctcaaaacattcccccatccaaacacactct 1583882  T

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Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 41 - 76
Target Start/End: Original strand, 11716515 - 11716550
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaa 76  Q
    |||||||||||||||||||||||| |||||||||||    
T  11716515 aacattacattccctcaaaacattcccccatccaaa 11716550  T

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Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 41 - 84
Target Start/End: Original strand, 14365815 - 14365858
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaacagactct 84  Q
    |||||||||||||||||||||||| | ||||||||||| |||||    
T  14365815 aacattacattccctcaaaacattcctccatccaaacacactct 14365858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 41 - 76
Target Start/End: Complemental strand, 30698324 - 30698289
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaa 76  Q
    |||||||||||||||||||||||| |||||||||||    
T  30698324 aacattacattccctcaaaacattcccccatccaaa 30698289  T

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Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 78
Target Start/End: Complemental strand, 11793939 - 11793901
Alignment:
Q  40 taacattacattccctcaaaacatttccccatccaaaca 78  Q
    ||||||||||||||||||||| ||| |||||||||||||    
T  11793939 taacattacattccctcaaaatattcccccatccaaaca 11793901  T

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Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 87
Target Start/End: Complemental strand, 41461558 - 41461512
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaacagactcttag 87  Q
    ||||||||||| |||||||| ||||||||||||||||| ||| ||||    
T  41461558 aacattacattacctcaaaatatttccccatccaaacacactattag 41461512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 87
Target Start/End: Original strand, 41585710 - 41585748
Alignment:
Q  49 attccctcaaaacatttccccatccaaacagactcttag 87  Q
    |||||||||||||||||| ||||||||||| ||||||||    
T  41585710 attccctcaaaacatttcaccatccaaacacactcttag 41585748  T

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Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 78
Target Start/End: Original strand, 3345852 - 3345881
Alignment:
Q  49 attccctcaaaacatttccccatccaaaca 78  Q
    ||||||||||||||||||||||||||||||    
T  3345852 attccctcaaaacatttccccatccaaaca 3345881  T

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Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 86
Target Start/End: Complemental strand, 39630268 - 39630223
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaacagactctta 86  Q
    |||| ||||||||||||||||||||| |||| |||||| |||||||    
T  39630268 aacaatacattccctcaaaacatttctccattcaaacacactctta 39630223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 78
Target Start/End: Original strand, 44205678 - 44205707
Alignment:
Q  49 attccctcaaaacatttccccatccaaaca 78  Q
    ||||||||||||||||||||||||||||||    
T  44205678 attccctcaaaacatttccccatccaaaca 44205707  T

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Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 40 - 84
Target Start/End: Complemental strand, 8735888 - 8735844
Alignment:
Q  40 taacattacattccctcaaaacatttccccatccaaacagactct 84  Q
    |||||||| ||||||||||||||| | |||||||||||| |||||    
T  8735888 taacattatattccctcaaaacatgttcccatccaaacacactct 8735844  T

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Target: scaffold1562 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold1562
Description:

Target: scaffold1562; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 41 - 78
Target Start/End: Original strand, 521 - 558
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaaca 78  Q
    |||||||||||||||||||||||| |||||||||||||    
T  521 aacattacattccctcaaaacattcccccatccaaaca 558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1158 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold1158
Description:

Target: scaffold1158; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 41 - 78
Target Start/End: Complemental strand, 2072 - 2035
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaaca 78  Q
    |||||||||||||||||||||||| |||||||||||||    
T  2072 aacattacattccctcaaaacattcccccatccaaaca 2035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 41 - 86
Target Start/End: Original strand, 42094 - 42139
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaacagactctta 86  Q
    ||||||||||||||||||||| || ||||||||||||| |||||||    
T  42094 aacattacattccctcaaaacgttcccccatccaaacacactctta 42139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 78
Target Start/End: Complemental strand, 82986 - 82949
Alignment:
Q  41 aacattacattccctcaaaacatttccccatccaaaca 78  Q
    ||||||||||||||||||||||||  ||||||||||||    
T  82986 aacattacattccctcaaaacattcacccatccaaaca 82949  T

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Target: scaffold0039 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 49 - 93
Target Start/End: Complemental strand, 109084 - 109040
Alignment:
Q  49 attccctcaaaacatttccccatccaaacagactcttaggatttt 93  Q
    |||||||||||||||| ||||||||||||| ||||| | ||||||    
T  109084 attccctcaaaacattcccccatccaaacacactctaaagatttt 109040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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