View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20392_low_37 (Length: 258)
Name: NF20392_low_37
Description: NF20392
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20392_low_37 |
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Alignment Details
Target: chr2 (Bit Score: 177; Significance: 2e-95; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 17 - 242
Target Start/End: Original strand, 1251867 - 1252112
Alignment:
| Q |
17 |
atgaagaaacttgaaggaaaaacaagataaaactacataaagatcagaatcatatacctgccaatatacctaagagactttggtgctgaaccttcttgtg |
116 |
Q |
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| T |
1251867 |
atgaagaaacttgaaggaaaaacaagataaaactacataaagatcagaatcatatacctgccaatatacctaagagactttggtgctgaaccttcttgtg |
1251966 |
T |
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| Q |
117 |
gaaacttgcaattttctacgtatctacgaaaca--------------------aaaattagctcaattgttacatgttaactcaagaatcaggtctcaaa |
196 |
Q |
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||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| |
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| T |
1251967 |
gaaacttgcaattttctacgtatctacgaaacaaagttccaaggattcatttgaaaattagctcaattgttacatgttaactcaagaatcaggtctgaaa |
1252066 |
T |
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| Q |
197 |
tagtactcgataacagaatttccaaagcttacttggcggttggttc |
242 |
Q |
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| T |
1252067 |
tagtactcgataacagaatttccaaagcttacttggcggttggttc |
1252112 |
T |
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