View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20392_low_53 (Length: 203)
Name: NF20392_low_53
Description: NF20392
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20392_low_53 |
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Alignment Details
Target: chr2 (Bit Score: 168; Significance: 3e-90; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 168; E-Value: 3e-90
Query Start/End: Original strand, 20 - 187
Target Start/End: Original strand, 24860279 - 24860446
Alignment:
| Q |
20 |
aggcaataagttgagcaacccaataaaagagagcagttgggacactaatatgtcctcccacagccattgcaaaggtcacagcaggattgacatgtccacc |
119 |
Q |
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| T |
24860279 |
aggcaataagttgagcaacccaataaaagagagcagttgggacactaatatgtcctcccacagccattgcaaaggtcacagcaggattgacatgtccacc |
24860378 |
T |
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| Q |
120 |
agagatgtcccatgcaatgtacaaaacagaagacagagcaaaagcacttgcaatggcacccacaacca |
187 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24860379 |
agagatgtcccatgcaatgtacaaaacagaagacagagcaaaagcacttgcaatggcacccacaacca |
24860446 |
T |
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