View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF20393_low_10 (Length: 259)
Name: NF20393_low_10
Description: NF20393
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20393_low_10 |
 |  |
|
Alignment Details
Target: chr7 (Bit Score: 95; Significance: 1e-46; HSPs: 7)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 15578149 - 15578055
Alignment:
| Q |
1 |
agtgagatataagtcaactaattaaaataagatatagttgtatttattgtttgtttttgtagcactaacatcatcaattatgttatttatcatct |
95 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15578149 |
agtgagatataagtcaactaattaaaataagatatagttgtatttattgtttgtttttgtagcactaacatcatcaattatgttatttatcatct |
15578055 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 28750646 - 28750740
Alignment:
| Q |
1 |
agtgagatataagtcaactaattaaaataagatatagttgtatttattgtttgtttttgtagcactaacatcatcaattatgttatttatcatct |
95 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28750646 |
agtgagatataagtcaactaattaaaataagatatagttgtatttattgtttgtttttgtagcactaacatcatcaattatgttatttatcatct |
28750740 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 38916112 - 38916206
Alignment:
| Q |
1 |
agtgagatataagtcaactaattaaaataagatatagttgtatttattgtttgtttttgtagcactaacatcatcaattatgttatttatcatct |
95 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38916112 |
agtgagatataagtcaactaattaaaataagatatagttgtatttattgtttgtttttgtagcactaacatcatcaattatgttatttatcatct |
38916206 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 27230864 - 27230770
Alignment:
| Q |
1 |
agtgagatataagtcaactaattaaaataagatatagttgtatttattgtttgtttttgtagcactaacatcatcaattatgttatttatcatct |
95 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
27230864 |
agtgagatataagtcaactaattaaaataagatataattgtatttattgtttgtttttgtagcactaacatcaacaattatgttatttatcatct |
27230770 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 32741541 - 32741579
Alignment:
| Q |
1 |
agtgagatataagtcaactaattaaaataagatatagtt |
39 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
32741541 |
agtgagatataagtcaactaattaaattaagatatagtt |
32741579 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 13 - 46
Target Start/End: Complemental strand, 21972106 - 21972073
Alignment:
| Q |
13 |
gtcaactaattaaaataagatatagttgtattta |
46 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||| |
|
|
| T |
21972106 |
gtcaactaattaaaataagaaatagttgtattta |
21972073 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 202
Target Start/End: Complemental strand, 15577971 - 15577943
Alignment:
| Q |
174 |
aataatacctaataaattgaacgtaacgt |
202 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
15577971 |
aataatacctaataaattgaacgtaacgt |
15577943 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 95; Significance: 1e-46; HSPs: 6)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 12307038 - 12307132
Alignment:
| Q |
1 |
agtgagatataagtcaactaattaaaataagatatagttgtatttattgtttgtttttgtagcactaacatcatcaattatgttatttatcatct |
95 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12307038 |
agtgagatataagtcaactaattaaaataagatatagttgtatttattgtttgtttttgtagcactaacatcatcaattatgttatttatcatct |
12307132 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 3 - 95
Target Start/End: Complemental strand, 605369 - 605277
Alignment:
| Q |
3 |
tgagatataagtcaactaattaaaataagatatagttgtatttattgtttgtttttgtagcactaacatcatcaattatgttatttatcatct |
95 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
605369 |
tgagatataaatcaactaattaaaataagatatagttgtatttattgtttgtttttgtagcactaacatcatcaattatgttatttatcatct |
605277 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 8701289 - 8701197
Alignment:
| Q |
1 |
agtgagatataagtcaactaattaaaataagatatagttgtatttattgtttgtttttgtagcactaacatcatcaattatgttatttatcat |
93 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8701289 |
agtgatatataagtcaactaattaaaataagatatagttgtatttattgtttgtttttgtagcactaacatcatcaattatgttatttatcat |
8701197 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 7727105 - 7727183
Alignment:
| Q |
1 |
agtgagatataagtcaactaattaaaataagatatagttgtatttattgtttgtttttgtagcactaacatcatcaatt |
79 |
Q |
| |
|
|||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7727105 |
agtgcgatataaatcaactaattaaaataagatatagttgtatttattgtttgtttttgtagcactaacatcatcaatt |
7727183 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 43 - 95
Target Start/End: Original strand, 5365388 - 5365440
Alignment:
| Q |
43 |
tttattgtttgtttttgtagcactaacatcatcaattatgttatttatcatct |
95 |
Q |
| |
|
|||||||||||| ||||||||||||| || ||| ||||||||||||||||||| |
|
|
| T |
5365388 |
tttattgtttgtctttgtagcactaatattatccattatgttatttatcatct |
5365440 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 95
Target Start/End: Complemental strand, 2481293 - 2481241
Alignment:
| Q |
43 |
tttattgtttgtttttgtagcactaacatcatcaattatgttatttatcatct |
95 |
Q |
| |
|
|||||||||||| ||||||||||||| | ||| ||||||||||||||||||| |
|
|
| T |
2481293 |
tttattgtttgtctttgtagcactaatactatccattatgttatttatcatct |
2481241 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 95; Significance: 1e-46; HSPs: 3)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 9914603 - 9914509
Alignment:
| Q |
1 |
agtgagatataagtcaactaattaaaataagatatagttgtatttattgtttgtttttgtagcactaacatcatcaattatgttatttatcatct |
95 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9914603 |
agtgagatataagtcaactaattaaaataagatatagttgtatttattgtttgtttttgtagcactaacatcatcaattatgttatttatcatct |
9914509 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 30674158 - 30674252
Alignment:
| Q |
1 |
agtgagatataagtcaactaattaaaataagatatagttgtatttattgtttgtttttgtagcactaacatcatcaattatgttatttatcatct |
95 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30674158 |
agtgagatataagtcatctaattaaaataagatatagttgtatttattgtttgtttttgtagcactaacatcatcaattatgttatttatcatct |
30674252 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 9074995 - 9074901
Alignment:
| Q |
1 |
agtgagatataagtcaactaattaaaataagatatagttgtatttattgtttgtttttgtagcactaacatcatcaattatgttatttatcatct |
95 |
Q |
| |
|
|||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9074995 |
agtgagatataaatcaactaattaaaatgagatatagttgtatttattgtttgtttttgtagcactaacatcatcaattatgttatttatcatct |
9074901 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 95; Significance: 1e-46; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 40889171 - 40889077
Alignment:
| Q |
1 |
agtgagatataagtcaactaattaaaataagatatagttgtatttattgtttgtttttgtagcactaacatcatcaattatgttatttatcatct |
95 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
40889171 |
agtgagatataagtcaactaattaaaataagatatagttgtatttattgtttgtttttgtagcactaacatcatcaattatgttatttatcatct |
40889077 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 95
Target Start/End: Original strand, 44681144 - 44681196
Alignment:
| Q |
43 |
tttattgtttgtttttgtagcactaacatcatcaattatgttatttatcatct |
95 |
Q |
| |
|
|||||||||||| ||||||||||||| | ||| ||||||||||||||||||| |
|
|
| T |
44681144 |
tttattgtttgtctttgtagcactaatactatccattatgttatttatcatct |
44681196 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 95
Target Start/End: Original strand, 23272386 - 23272437
Alignment:
| Q |
43 |
tttattgtttgtttttgtagcactaacatcatcaattatgttatttatcatct |
95 |
Q |
| |
|
||||||||| || ||||||||||||| || |||| |||||||||||||||||| |
|
|
| T |
23272386 |
tttattgttggtctttgtagcactaatattatca-ttatgttatttatcatct |
23272437 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 91; Significance: 3e-44; HSPs: 7)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 23643807 - 23643713
Alignment:
| Q |
1 |
agtgagatataagtcaactaattaaaataagatatagttgtatttattgtttgtttttgtagcactaacatcatcaattatgttatttatcatct |
95 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23643807 |
agtgagatataagtcaactaattaaaataagatatagttgtatttattgtttgttttcgtagcactaacatcatcaattatgttatttatcatct |
23643713 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 43013156 - 43013062
Alignment:
| Q |
1 |
agtgagatataagtcaactaattaaaataagatatagttgtatttattgtttgtttttgtagcactaacatcatcaattatgttatttatcatct |
95 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
43013156 |
agtgagatataagtcaactaattaaaatgagatatagttgtatttattgtttgtttttgtagcattaacatcatcaattatgttatttatcatct |
43013062 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 54714583 - 54714661
Alignment:
| Q |
1 |
agtgagatataagtcaactaattaaaataagatatagttgtatttattgtttgtttttgtagcactaacatcatcaatt |
79 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
54714583 |
agtgagatataagtcaactaattaaaataagatatagttgtatttattgtttgtttttgtagcactaacatcatcaatt |
54714661 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 43 - 95
Target Start/End: Original strand, 12632824 - 12632876
Alignment:
| Q |
43 |
tttattgtttgtttttgtagcactaacatcatcaattatgttatttatcatct |
95 |
Q |
| |
|
|||||||||||| ||||||||||||| || ||| ||||||||||||||||||| |
|
|
| T |
12632824 |
tttattgtttgtctttgtagcactaatattatccattatgttatttatcatct |
12632876 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 95
Target Start/End: Original strand, 27108531 - 27108583
Alignment:
| Q |
43 |
tttattgtttgtttttgtagcactaacatcatcaattatgttatttatcatct |
95 |
Q |
| |
|
|||||||||||| ||||||||||||| | ||| ||||||||||||||||||| |
|
|
| T |
27108531 |
tttattgtttgtctttgtagcactaatactatccattatgttatttatcatct |
27108583 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 919128 - 919096
Alignment:
| Q |
14 |
tcaactaattaaaataagatatagttgtattta |
46 |
Q |
| |
|
||||||||||||||||||| ||||||||||||| |
|
|
| T |
919128 |
tcaactaattaaaataagaaatagttgtattta |
919096 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 28104373 - 28104341
Alignment:
| Q |
14 |
tcaactaattaaaataagatatagttgtattta |
46 |
Q |
| |
|
||||||||||||||||||| ||||||||||||| |
|
|
| T |
28104373 |
tcaactaattaaaataagaaatagttgtattta |
28104341 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 91; Significance: 3e-44; HSPs: 4)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 53153564 - 53153658
Alignment:
| Q |
1 |
agtgagatataagtcaactaattaaaataagatatagttgtatttattgtttgtttttgtagcactaacatcatcaattatgttatttatcatct |
95 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
53153564 |
agtgagatataagtcaactaattaaaataagatatagttgtatttattgtttgtttttgtagcactaacatcatcaatgatgttatttatcatct |
53153658 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 30384775 - 30384869
Alignment:
| Q |
1 |
agtgagatataagtcaactaattaaaataagatatagttgtatttattgtttgtttttgtagcactaacatcatcaattatgttatttatcatct |
95 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
30384775 |
agtgagatataagtcaactaattaaaataagatataattgtatttattgtttgtttttgtagcactaacatcattaattatgttatttatcatct |
30384869 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 3 - 95
Target Start/End: Original strand, 785491 - 785583
Alignment:
| Q |
3 |
tgagatataagtcaactaattaaaataagatatagttgtatttattgtttgtttttgtagcactaacatcatcaattatgttatttatcatct |
95 |
Q |
| |
|
|||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
785491 |
tgagatgtaaatccactaattaaaataagatatagttgtatttattgtttgtttttgtagcactaacatcatcaattatgttatttatcatct |
785583 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 13 - 46
Target Start/End: Original strand, 39737279 - 39737312
Alignment:
| Q |
13 |
gtcaactaattaaaataagatatagttgtattta |
46 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||| |
|
|
| T |
39737279 |
gtcaactaattaaaataagaaatagttgtattta |
39737312 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 87; Significance: 9e-42; HSPs: 3)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 25672656 - 25672562
Alignment:
| Q |
1 |
agtgagatataagtcaactaattaaaataagatatagttgtatttattgtttgtttttgtagcactaacatcatcaattatgttatttatcatct |
95 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
25672656 |
agtgatatataagtcaactaattaaaataagatatagttgtatttattgtttgtttttgtagcacaaacatcatcaattatgttatttatcatct |
25672562 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 14394370 - 14394276
Alignment:
| Q |
1 |
agtgagatataagtcaactaattaaaataagatatagttgtatttattgtttgtttttgtagcactaacatcatcaattatgttatttatcatct |
95 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
14394370 |
agtgagatataagtcaactaattaaaataagatataattgtatttattatttgtttttgtaacactaacatcatcaattatgttatttatcatct |
14394276 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 20983868 - 20983774
Alignment:
| Q |
1 |
agtgagatataagtcaactaattaaaataagatatagttgtatttattgtttgtttttgtagcactaacatcatcaattatgttatttatcatct |
95 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| |
|
|
| T |
20983868 |
agtgagatataagtcaactaattaaaatgagatatagttgtatttattgtttgtttttgtagtattaacatcatcaattatgttatttatcatct |
20983774 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 85; Significance: 1e-40; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 3 - 95
Target Start/End: Complemental strand, 308698 - 308606
Alignment:
| Q |
3 |
tgagatataagtcaactaattaaaataagatatagttgtatttattgtttgtttttgtagcactaacatcatcaattatgttatttatcatct |
95 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
308698 |
tgagatataaatcaactaattaaaataagatatagttatatttattgtttgtttttgtagcactaacatcatcaattatgttatttatcatct |
308606 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 187072 - 186979
Alignment:
| Q |
1 |
agtgagatataagtcaactaattaaaataagatatagttgtatttattgtttgtttttgtagcactaacatcatcaattatgttatttatcatct |
95 |
Q |
| |
|
|||||||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
187072 |
agtgagatataagtcaactaattata-taagatataattgtatttattgtttgtttttgtagcactaacatcatcaattatgttatttatcatct |
186979 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 25276862 - 25276955
Alignment:
| Q |
1 |
agtgagatataagtcaactaattaaaataagatatagttgtatttattgtttgtttttgtagcactaacatcatcaattatgttatttatcatct |
95 |
Q |
| |
|
||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
25276862 |
agtgagatataagtcaagtaattaaaataaaatatagttgtatttattgtttgttttt-tagcactaacatcatcaattatgttatttatcatct |
25276955 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University