View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20393_low_16 (Length: 220)

Name: NF20393_low_16
Description: NF20393
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20393_low_16
NF20393_low_16
[»] chr5 (18 HSPs)
chr5 (18-189)||(37823657-37823828)
chr5 (18-176)||(37639499-37639657)
chr5 (18-190)||(37393112-37393284)
chr5 (18-176)||(37711257-37711415)
chr5 (18-176)||(37401247-37401405)
chr5 (18-176)||(37593957-37594115)
chr5 (18-176)||(37696348-37696506)
chr5 (18-190)||(37532853-37533025)
chr5 (18-166)||(37702436-37702584)
chr5 (33-187)||(37696498-37696652)
chr5 (36-190)||(37594110-37594264)
chr5 (36-187)||(37401101-37401252)
chr5 (36-190)||(37639652-37639806)
chr5 (36-190)||(37711410-37711564)
chr5 (33-201)||(37382550-37382718)
chr5 (103-189)||(37428578-37428664)
chr5 (85-190)||(37435530-37435635)
chr5 (145-184)||(37413488-37413527)
[»] chr4 (4 HSPs)
chr4 (18-176)||(16843245-16843403)
chr4 (33-206)||(16845879-16846052)
chr4 (33-190)||(16843096-16843253)
chr4 (33-184)||(24217972-24218123)
[»] chr3 (1 HSPs)
chr3 (18-82)||(14553125-14553189)


Alignment Details
Target: chr5 (Bit Score: 128; Significance: 2e-66; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 18 - 189
Target Start/End: Original strand, 37823657 - 37823828
Alignment:
Q  18 ggaatcatacctttcaaattgttgtgagccaaatcgagcatataaagggaactggcattgcagaatgttgaagaaatatatcctgtgaagttgttgtttg 117  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  37823657 ggaatcatacctgtcaaattgttgtgagccaaatcgagcatataaagggaactggcattgcagaatgttgaagaaatgtatcctgtgaagttgttatttg 37823756  T
Q  118 agagtaaatagtttttaatgccatcaggtggaattggaagatctccttgaaagttgttgaaactgaggtcaa 189  Q
    ||||| || ||| || |||||||  |||||||||||||||||||||||| || |||||||||||||||||||    
T  37823757 agagtgaaaagtattgaatgccagaaggtggaattggaagatctccttgtaacttgttgaaactgaggtcaa 37823828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 18 - 176
Target Start/End: Original strand, 37639499 - 37639657
Alignment:
Q  18 ggaatcatacctttcaaattgttgtgagccaaatcgagcatataaagggaactggcattgcagaatgttgaagaaatatatcctgtgaagttgttgtttg 117  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  37639499 ggaatcatacctgtcaaattgttgtgagccaaatcgagcatataaagggaactggcattgcagaatgttgaagaaatgtatcctgtgaagttgttatttg 37639598  T
Q  118 agagtaaatagtttttaatgccatcaggtggaattggaagatctccttgaaagttgttg 176  Q
    ||||| || ||| ||||||||||  ||||||||||||||||||||||||||||||||||    
T  37639599 agagtgaaaagtatttaatgccagaaggtggaattggaagatctccttgaaagttgttg 37639657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 18 - 190
Target Start/End: Complemental strand, 37393284 - 37393112
Alignment:
Q  18 ggaatcatacctttcaaattgttgtgagccaaatcgagcatataaagggaactggcattgcagaatgttgaagaaatatatcctgtgaagttgttgtttg 117  Q
    |||||||||||| ||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||    
T  37393284 ggaatcatacctgtcaaattgttgtgagccaaattgaggatataaagggaactagcattgcagaatgttgaagaaatatctcctgtgaagttgttgtttg 37393185  T
Q  118 agagtaaatagtttttaatgccatcaggtggaattggaagatctccttgaaagttgttgaaactgaggtcaat 190  Q
    |||||||| ||| || ||||||||||||||||||||||||||| ||||| || ||||||||||| ||||||||    
T  37393184 agagtaaaaagtcttcaatgccatcaggtggaattggaagatcaccttgtaacttgttgaaactcaggtcaat 37393112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 18 - 176
Target Start/End: Original strand, 37711257 - 37711415
Alignment:
Q  18 ggaatcatacctttcaaattgttgtgagccaaatcgagcatataaagggaactggcattgcagaatgttgaagaaatatatcctgtgaagttgttgtttg 117  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  37711257 ggaatcatacctttcaaattgttgtgagccaaatcgagcacataaagggaactggcattgcagaatgttgaagaaatgtatcctgtgaagttgttatttg 37711356  T
Q  118 agagtaaatagtttttaatgccatcaggtggaattggaagatctccttgaaagttgttg 176  Q
    ||||| || ||| || |||||||  ||||||||||||||||||||||||||||||||||    
T  37711357 agagtgaaaagtattgaatgccagaaggtggaattggaagatctccttgaaagttgttg 37711415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 18 - 176
Target Start/End: Complemental strand, 37401405 - 37401247
Alignment:
Q  18 ggaatcatacctttcaaattgttgtgagccaaatcgagcatataaagggaactggcattgcagaatgttgaagaaatatatcctgtgaagttgttgtttg 117  Q
    |||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  37401405 ggaatcatacctgtcaaattgttgtgagccaaatcgagcacataaagggaactggcattgcagaatgttgaagaaatgtatcctgtgaagttgttatttg 37401306  T
Q  118 agagtaaatagtttttaatgccatcaggtggaattggaagatctccttgaaagttgttg 176  Q
    ||||| || ||| || |||||||  ||||||||||||||||||||||||||||||||||    
T  37401305 agagtgaaaagtattgaatgccagaaggtggaattggaagatctccttgaaagttgttg 37401247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 18 - 176
Target Start/End: Original strand, 37593957 - 37594115
Alignment:
Q  18 ggaatcatacctttcaaattgttgtgagccaaatcgagcatataaagggaactggcattgcagaatgttgaagaaatatatcctgtgaagttgttgtttg 117  Q
    |||||||||||| | ||||||||||||||||||| ||| | ||  ||| |||| |||||||||||||||||||| |||| ||||||||| ||||||||||    
T  37593957 ggaatcatacctgttaaattgttgtgagccaaattgagaacattcaggtaacttgcattgcagaatgttgaagatatatctcctgtgaaattgttgtttg 37594056  T
Q  118 agagtaaatagtttttaatgccatcaggtggaattggaagatctccttgaaagttgttg 176  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37594057 agagtaaatagtttttaatgccatcaggtggaattggaagatctccttgaaagttgttg 37594115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 18 - 176
Target Start/End: Original strand, 37696348 - 37696506
Alignment:
Q  18 ggaatcatacctttcaaattgttgtgagccaaatcgagcatataaagggaactggcattgcagaatgttgaagaaatatatcctgtgaagttgttgtttg 117  Q
    |||||||||||| | ||||||||||||||||||| ||| | ||  ||| |||| |||||||||||||||||||| |||| ||||||||| ||||||||||    
T  37696348 ggaatcatacctgttaaattgttgtgagccaaattgagaacattcaggtaacttgcattgcagaatgttgaagatatatctcctgtgaaattgttgtttg 37696447  T
Q  118 agagtaaatagtttttaatgccatcaggtggaattggaagatctccttgaaagttgttg 176  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  37696448 agagtaaatagtttttaatgccatcaggtggaattggaagatctccttgaaaattgttg 37696506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 18 - 190
Target Start/End: Original strand, 37532853 - 37533025
Alignment:
Q  18 ggaatcatacctttcaaattgttgtgagccaaatcgagcatataaagggaactggcattgcagaatgttgaagaaatatatcctgtgaagttgttgtttg 117  Q
    |||||||||||| ||||||||||||||||||||| ||| | ||  ||| |||| ||||||||||||||||||||||||| ||||||||||||||| ||||    
T  37532853 ggaatcatacctgtcaaattgttgtgagccaaattgagaacattcaggtaacttgcattgcagaatgttgaagaaatatctcctgtgaagttgttatttg 37532952  T
Q  118 agagtaaatagtttttaatgccatcaggtggaattggaagatctccttgaaagttgttgaaactgaggtcaat 190  Q
    ||||| || ||| |  ||||||||||||||||||||||||||||||||| || ||||||||||| | ||||||    
T  37532953 agagtgaaaagtatccaatgccatcaggtggaattggaagatctccttgtaacttgttgaaactcaagtcaat 37533025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 18 - 166
Target Start/End: Original strand, 37702436 - 37702584
Alignment:
Q  18 ggaatcatacctttcaaattgttgtgagccaaatcgagcatataaagggaactggcattgcagaatgttgaagaaatatatcctgtgaagttgttgtttg 117  Q
    |||||||||||| ||||||||||||||||||||| ||| || ||||||||||| |||||||||||||||||||| |||| ||||||||||||||||||||    
T  37702436 ggaatcatacctgtcaaattgttgtgagccaaattgagaatgtaaagggaacttgcattgcagaatgttgaagagatatttcctgtgaagttgttgtttg 37702535  T
Q  118 agagtaaatagtttttaatgccatcaggtggaattggaagatctccttg 166  Q
    |||||||| ||| |  |||||||| ||||||||||||||||| ||||||    
T  37702536 agagtaaaaagtgtacaatgccatgaggtggaattggaagatgtccttg 37702584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 33 - 187
Target Start/End: Original strand, 37696498 - 37696652
Alignment:
Q  33 aaattgttgtgagccaaatcgagcatataaagggaactggcattgcagaatgttgaagaaatatatcctgtgaagttgttgtttgagagtaaatagtttt 132  Q
    ||||||||||||||||||| |||  ||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| || ||| |     
T  37696498 aaattgttgtgagccaaattgagggtataaagggaacttgcattgcagaatgttgaagaaatatttcctgtgaagttgttgtttgagagtgaaaagtatc 37696597  T
Q  133 taatgccatcaggtggaattggaagatctccttgaaagttgttgaaactgaggtc 187  Q
     ||||| |  |||||||||||||||||||||||| || |||||||||||||||||    
T  37696598 caatgctagaaggtggaattggaagatctccttgtaacttgttgaaactgaggtc 37696652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 36 - 190
Target Start/End: Original strand, 37594110 - 37594264
Alignment:
Q  36 ttgttgtgagccaaatcgagcatataaagggaactggcattgcagaatgttgaagaaatatatcctgtgaagttgttgtttgagagtaaatagtttttaa 135  Q
    |||||||||||||||| |||  ||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| ||||||||| || ||| || ||    
T  37594110 ttgttgtgagccaaattgagggtataaagggaacttgcattgcagaatgttgaagaaatatttcctgtgaagttgttatttgagagtgaaaagtattgaa 37594209  T
Q  136 tgccatcaggtggaattggaagatctccttgaaagttgttgaaactgaggtcaat 190  Q
    |||||  |||||||||||||||||||||||| || ||||||||||| | ||||||    
T  37594210 tgccagaaggtggaattggaagatctccttgtaacttgttgaaactcaagtcaat 37594264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 36 - 187
Target Start/End: Complemental strand, 37401252 - 37401101
Alignment:
Q  36 ttgttgtgagccaaatcgagcatataaagggaactggcattgcagaatgttgaagaaatatatcctgtgaagttgttgtttgagagtaaatagtttttaa 135  Q
    |||||||||||||||| |||  ||  ||||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||||||| || ||| || ||    
T  37401252 ttgttgtgagccaaattgagggtacgaagggaacttgcattgcagaatgttgaagaaatgtatcctgtgaagttgttatttgagagtgaaaagtattcaa 37401153  T
Q  136 tgccatcaggtggaattggaagatctccttgaaagttgttgaaactgaggtc 187  Q
    |||||  |||||||||||||||||||||||| || |||||||||||||||||    
T  37401152 tgccagaaggtggaattggaagatctccttgtaacttgttgaaactgaggtc 37401101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 36 - 190
Target Start/End: Original strand, 37639652 - 37639806
Alignment:
Q  36 ttgttgtgagccaaatcgagcatataaagggaactggcattgcagaatgttgaagaaatatatcctgtgaagttgttgtttgagagtaaatagtttttaa 135  Q
    |||||||||||||||| |||  ||||||||||||| || |||| ||||||||||||||||| ||||||||||||||| |||||||||||| ||| |  ||    
T  37639652 ttgttgtgagccaaattgagggtataaagggaacttgcgttgcggaatgttgaagaaatatttcctgtgaagttgttatttgagagtaaaaagtatacaa 37639751  T
Q  136 tgccatcaggtggaattggaagatctccttgaaagttgttgaaactgaggtcaat 190  Q
    |||||||||||||||||||||||| |||||| ||  |||||||||| || |||||    
T  37639752 tgccatcaggtggaattggaagatgtccttgcaacatgttgaaactaagatcaat 37639806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 36 - 190
Target Start/End: Original strand, 37711410 - 37711564
Alignment:
Q  36 ttgttgtgagccaaatcgagcatataaagggaactggcattgcagaatgttgaagaaatatatcctgtgaagttgttgtttgagagtaaatagtttttaa 135  Q
    |||||||||||||||| |||  ||||||||||||| || |||| ||||||||||||||||| ||||||||||||||| ||||||||| || ||| || ||    
T  37711410 ttgttgtgagccaaattgagggtataaagggaacttgcgttgcggaatgttgaagaaatatttcctgtgaagttgttatttgagagtgaaaagtattgaa 37711509  T
Q  136 tgccatcaggtggaattggaagatctccttgaaagttgttgaaactgaggtcaat 190  Q
    |||||   ||||||||||||||||||||||| ||  |||||||||| || |||||    
T  37711510 tgccagatggtggaattggaagatctccttgcaacatgttgaaactaagatcaat 37711564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 33 - 201
Target Start/End: Complemental strand, 37382718 - 37382550
Alignment:
Q  33 aaattgttgtgagccaaatcgagcatataaagggaactggcattgcagaatgttgaagaaatatatcctgtgaagttgttgtttgagagtaaatagtttt 132  Q
    ||||||||||||||||||| ||||| ||  |||||||| || ||||| ||||   ||  ||| | |||||||||||||||||| ||||||||| |||  |    
T  37382718 aaattgttgtgagccaaattgagcacattcagggaacttgcgttgcacaatgaaaaatcaatgtttcctgtgaagttgttgttcgagagtaaaaagtagt 37382619  T
Q  133 taatgccatcaggtggaattggaagatctccttgaaagttgttgaaactgaggtcaatttgttgaatgt 201  Q
     |||||||| | |||| ||||||||||||||||| || |||||||||||||| ||||  ||||||||||    
T  37382618 aaatgccataacgtgggattggaagatctccttgcaacttgttgaaactgagatcaacatgttgaatgt 37382550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 103 - 189
Target Start/End: Original strand, 37428578 - 37428664
Alignment:
Q  103 tgaagttgttgtttgagagtaaatagtttttaatgccatcaggtggaattggaagatctccttgaaagttgttgaaactgaggtcaa 189  Q
    ||||||||||||| ||||||||| ||| || |||||||| |||||||||||||||||||||||| || |||||||||||||| ||||    
T  37428578 tgaagttgttgttagagagtaaaaagtattcaatgccataaggtggaattggaagatctccttgcaacttgttgaaactgagatcaa 37428664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 85 - 190
Target Start/End: Original strand, 37435530 - 37435635
Alignment:
Q  85 ttgaagaaatatatcctgtgaagttgttgtttgagagtaaatagtttttaatgccatcaggtggaattggaagatctccttgaaagttgttgaaactgag 184  Q
    |||||||||| | ||||| |||||||||||||||||| ||| ||| || ||||||||| | |||||||||||  |||||||| || ||||||||||||||    
T  37435530 ttgaagaaatgtctcctgcgaagttgttgtttgagagcaaaaagtattcaatgccatcggatggaattggaatgtctccttgcaatttgttgaaactgag 37435629  T
Q  185 gtcaat 190  Q
    ||||||    
T  37435630 gtcaat 37435635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 145 - 184
Target Start/End: Complemental strand, 37413527 - 37413488
Alignment:
Q  145 gtggaattggaagatctccttgaaagttgttgaaactgag 184  Q
    |||||||||||||||||||||| || ||||||||||||||    
T  37413527 gtggaattggaagatctccttgcaacttgttgaaactgag 37413488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 99; Significance: 5e-49; HSPs: 4)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 18 - 176
Target Start/End: Complemental strand, 16843403 - 16843245
Alignment:
Q  18 ggaatcatacctttcaaattgttgtgagccaaatcgagcatataaagggaactggcattgcagaatgttgaagaaatatatcctgtgaagttgttgtttg 117  Q
    |||||||||||| |||||||||||||||||||||  |||| || ||||| ||| ||||||||||||||||||||||||| ||||||||||||||| ||||    
T  16843403 ggaatcatacctgtcaaattgttgtgagccaaattaagcaaattaagggtacttgcattgcagaatgttgaagaaatatctcctgtgaagttgttatttg 16843304  T
Q  118 agagtaaatagtttttaatgccatcaggtggaattggaagatctccttgaaagttgttg 176  Q
    ||||| || ||| |  |||||||||||||||||||||||||||||||||||| ||||||    
T  16843303 agagtgaaaagtatacaatgccatcaggtggaattggaagatctccttgaaaattgttg 16843245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 33 - 206
Target Start/End: Complemental strand, 16846052 - 16845879
Alignment:
Q  33 aaattgttgtgagccaaatcgagcatataaagggaactggcattgcagaatgttgaagaaatatatcctgtgaagttgttgtttgagagtaaatagtttt 132  Q
    ||||||||||||||||||| ||| | |   ||| |||| ||| |||||||||| ||||| |||| | |||||||||||||||||||||| ||| ||| ||    
T  16846052 aaattgttgtgagccaaattgagaacaatcaggaaacttgcactgcagaatgtggaagacatatcttctgtgaagttgttgtttgagagcaaaaagtatt 16845953  T
Q  133 taatgccatcaggtggaattggaagatctccttgaaagttgttgaaactgaggtcaatttgttgaatgttcttc 206  Q
    ||||||||| |  |||||||||||  |||||||| || |||||||||||||||||||| ||| |||||| ||||    
T  16845952 taatgccataatatggaattggaatgtctccttgcaatttgttgaaactgaggtcaatgtgtcgaatgtccttc 16845879  T

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Target: chr4; HSP #3
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 33 - 190
Target Start/End: Complemental strand, 16843253 - 16843096
Alignment:
Q  33 aaattgttgtgagccaaatcgagcatataaagggaactggcattgcagaatgttgaagaaatatatcctgtgaagttgttgtttgagagtaaatagtttt 132  Q
    ||||||||||||||||||| ||| | ||  | | |||| ||||||||||||||||||||||| | ||||||||||||||||||||||||  || ||| ||    
T  16843253 aaattgttgtgagccaaattgagaacattcaagaaacttgcattgcagaatgttgaagaaatgtctcctgtgaagttgttgtttgagagcgaaaagtatt 16843154  T
Q  133 taatgccatcaggtggaattggaagatctccttgaaagttgttgaaactgaggtcaat 190  Q
     || ||||| || |||||||||||  |||||||| || ||||||||||| || |||||    
T  16843153 gaaggccataagatggaattggaatgtctccttgcaatttgttgaaactaagatcaat 16843096  T

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Target: chr4; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 33 - 184
Target Start/End: Complemental strand, 24218123 - 24217972
Alignment:
Q  33 aaattgttgtgagccaaatcgagcatataaagggaactggcattgcagaatgttgaagaaatatatcctgtgaagttgttgtttgagagtaaatagtttt 132  Q
    |||||||||| |||||||| ||||| ||  |||||||| |||||||| | ||   ||| ||| | ||||||||||||||||||||||||| || ||| ||    
T  24218123 aaattgttgttagccaaattgagcaaattcagggaacttgcattgcacagtgacaaagcaatgtctcctgtgaagttgttgtttgagagtgaaaagtatt 24218024  T
Q  133 taatgccatcaggtggaattggaagatctccttgaaagttgttgaaactgag 184  Q
     ||| ||||  |||||||| ||||| |||||||| || ||||||||||||||    
T  24218023 gaattccatagggtggaatcggaaggtctccttgcaacttgttgaaactgag 24217972  T

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Target: chr3 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 14553125 - 14553189
Alignment:
Q  18 ggaatcatacctttcaaattgttgtgagccaaatcgagcatataaagggaactggcattgcagaa 82  Q
    |||||||||||| ||||||||||||||||||||| |||||||||||||||||| |||||||||||    
T  14553125 ggaatcatacctgtcaaattgttgtgagccaaattgagcatataaagggaacttgcattgcagaa 14553189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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