View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20394_high_10 (Length: 201)
Name: NF20394_high_10
Description: NF20394
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20394_high_10 |
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Alignment Details
Target: chr3 (Bit Score: 132; Significance: 9e-69; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 132; E-Value: 9e-69
Query Start/End: Original strand, 16 - 186
Target Start/End: Original strand, 25370040 - 25370203
Alignment:
| Q |
16 |
aatatcaacatattttgtccgagttttatgttatgtattttgttgttatatttgcattacacacataaaatacacaccaaatataatacttgaatgtttt |
115 |
Q |
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| T |
25370040 |
aatatcaacatattttgtccgagttttatgtcat--attttgttgttatatttgtattacacacataaaatacacaccaaatataatacttgaatgtttt |
25370137 |
T |
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| Q |
116 |
tgtattagacacaggaatgtataatataatacctgaatatataaacttttttgaggatgaggaactttttg |
186 |
Q |
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||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25370138 |
tgtattagacacaggaatg-----tataatacctgaatatataaacttttttgaggatgaggaactttttg |
25370203 |
T |
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