View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20395_high_29 (Length: 201)

Name: NF20395_high_29
Description: NF20395
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20395_high_29
NF20395_high_29
[»] chr7 (82 HSPs)
chr7 (1-201)||(4785833-4786034)
chr7 (60-201)||(4818833-4818974)
chr7 (60-201)||(7318269-7318411)
chr7 (64-201)||(10586989-10587127)
chr7 (64-180)||(3734614-3734730)
chr7 (60-195)||(17153115-17153251)
chr7 (70-198)||(8054457-8054589)
chr7 (60-180)||(8313353-8313476)
chr7 (62-201)||(9574403-9574543)
chr7 (60-201)||(4986551-4986693)
chr7 (60-201)||(4990649-4990791)
chr7 (98-195)||(13759859-13759957)
chr7 (60-201)||(15869591-15869733)
chr7 (60-195)||(16365707-16365842)
chr7 (100-197)||(18662441-18662539)
chr7 (123-201)||(9864350-9864429)
chr7 (62-201)||(23099916-23100055)
chr7 (71-201)||(9731600-9731730)
chr7 (99-199)||(31492928-31493029)
chr7 (126-201)||(10937598-10937674)
chr7 (97-180)||(18368978-18369061)
chr7 (100-197)||(2563818-2563915)
chr7 (60-174)||(3191020-3191134)
chr7 (99-180)||(8979006-8979087)
chr7 (98-175)||(11803103-11803180)
chr7 (87-201)||(1584541-1584654)
chr7 (60-201)||(1587677-1587818)
chr7 (120-201)||(3329679-3329761)
chr7 (100-201)||(21230308-21230410)
chr7 (60-201)||(12181604-12181746)
chr7 (98-198)||(1848226-1848325)
chr7 (60-194)||(7492225-7492358)
chr7 (70-198)||(8054029-8054158)
chr7 (99-190)||(10648585-10648677)
chr7 (82-172)||(17077154-17077247)
chr7 (140-201)||(5797507-5797569)
chr7 (124-197)||(11221189-11221263)
chr7 (120-180)||(5108584-5108643)
chr7 (94-201)||(6042457-6042564)
chr7 (126-201)||(18449238-18449314)
chr7 (82-198)||(20582258-20582375)
chr7 (63-201)||(6013589-6013728)
chr7 (82-198)||(13418533-13418653)
chr7 (99-201)||(16297820-16297923)
chr7 (100-175)||(18467474-18467549)
chr7 (120-201)||(2350768-2350850)
chr7 (98-176)||(4449002-4449080)
chr7 (100-201)||(5530017-5530119)
chr7 (100-201)||(10584487-10584589)
chr7 (98-180)||(39273174-39273256)
chr7 (100-200)||(4579095-4579195)
chr7 (150-195)||(21102344-21102389)
chr7 (149-201)||(33035469-33035521)
chr7 (84-201)||(12329678-12329797)
chr7 (123-201)||(14755154-14755233)
chr7 (60-110)||(1584320-1584370)
chr7 (126-199)||(21912507-21912581)
chr7 (98-175)||(17203047-17203123)
chr7 (126-201)||(9916562-9916638)
chr7 (126-201)||(9924474-9924550)
chr7 (99-201)||(1872781-1872884)
chr7 (127-201)||(7397192-7397266)
chr7 (1-32)||(7492168-7492199)
chr7 (135-198)||(7748122-7748184)
chr7 (135-178)||(8877441-8877484)
chr7 (123-201)||(9500440-9500519)
chr7 (98-176)||(16059020-16059099)
chr7 (135-201)||(16306690-16306757)
chr7 (135-197)||(18661590-18661653)
chr7 (1-35)||(4818999-4819033)
chr7 (159-201)||(7782557-7782599)
chr7 (100-201)||(9245177-9245279)
chr7 (140-197)||(9866582-9866639)
chr7 (122-175)||(22067248-22067302)
chr7 (140-201)||(26134789-26134850)
chr7 (120-201)||(9130902-9130985)
chr7 (1-30)||(17153059-17153088)
chr7 (126-201)||(12391181-12391257)
chr7 (100-172)||(18466031-18466103)
chr7 (100-180)||(18495391-18495471)
chr7 (144-180)||(21227197-21227233)
chr7 (150-201)||(23093306-23093357)
[»] chr2 (37 HSPs)
chr2 (60-201)||(20174596-20174738)
chr2 (60-201)||(32085459-32085601)
chr2 (60-201)||(25618553-25618692)
chr2 (98-198)||(17743475-17743576)
chr2 (94-201)||(29719226-29719334)
chr2 (97-180)||(25196028-25196111)
chr2 (120-201)||(15339234-15339316)
chr2 (98-198)||(28925521-28925621)
chr2 (98-176)||(25535296-25535374)
chr2 (98-180)||(45621880-45621962)
chr2 (98-198)||(27909118-27909219)
chr2 (62-201)||(25885423-25885562)
chr2 (60-196)||(11382715-11382851)
chr2 (100-201)||(45553126-45553228)
chr2 (89-201)||(9774325-9774435)
chr2 (60-201)||(31804862-31805003)
chr2 (126-201)||(8503097-8503173)
chr2 (126-201)||(25888247-25888323)
chr2 (84-180)||(17349375-17349472)
chr2 (82-198)||(17635755-17635875)
chr2 (98-176)||(24090925-24091003)
chr2 (122-176)||(25530469-25530523)
chr2 (98-201)||(12953293-12953397)
chr2 (99-175)||(27418389-27418465)
chr2 (60-160)||(28606139-28606239)
chr2 (128-201)||(8447079-8447152)
chr2 (122-180)||(30411696-30411754)
chr2 (148-201)||(20173347-20173400)
chr2 (123-198)||(17675654-17675730)
chr2 (94-201)||(19200130-19200237)
chr2 (87-201)||(13776335-13776449)
chr2 (60-110)||(29027584-29027634)
chr2 (98-201)||(26603349-26603453)
chr2 (100-180)||(28770444-28770524)
chr2 (100-201)||(5777213-5777314)
chr2 (126-201)||(12557736-12557811)
chr2 (1-45)||(25887809-25887853)
[»] scaffold0622 (1 HSPs)
scaffold0622 (60-201)||(724-867)
[»] chr5 (39 HSPs)
chr5 (84-201)||(25550487-25550607)
chr5 (65-201)||(18208215-18208351)
chr5 (62-201)||(24266917-24267057)
chr5 (62-201)||(24343548-24343688)
chr5 (65-201)||(18937744-18937879)
chr5 (60-180)||(34487656-34487776)
chr5 (60-180)||(19283816-19283936)
chr5 (120-198)||(15375903-15375982)
chr5 (60-201)||(15690774-15690914)
chr5 (60-201)||(22755517-22755659)
chr5 (98-198)||(19004225-19004326)
chr5 (98-178)||(23388837-23388917)
chr5 (101-195)||(19086181-19086276)
chr5 (98-196)||(24245543-24245642)
chr5 (60-201)||(25402299-25402440)
chr5 (123-201)||(15469932-15470011)
chr5 (99-201)||(17171553-17171656)
chr5 (97-180)||(24140460-24140543)
chr5 (81-180)||(20315408-20315511)
chr5 (100-201)||(24852173-24852275)
chr5 (100-180)||(17185481-17185561)
chr5 (97-196)||(17431884-17431984)
chr5 (120-198)||(34128636-34128714)
chr5 (120-201)||(24167605-24167687)
chr5 (98-161)||(20549703-20549766)
chr5 (150-201)||(23014660-23014711)
chr5 (97-180)||(39434480-39434563)
chr5 (98-176)||(17315099-17315177)
chr5 (98-176)||(20858707-20858785)
chr5 (97-201)||(26110460-26110564)
chr5 (120-196)||(36175135-36175211)
chr5 (63-115)||(24662140-24662192)
chr5 (98-176)||(20564079-20564158)
chr5 (135-201)||(26121360-26121426)
chr5 (98-195)||(19051551-19051648)
chr5 (120-201)||(26120861-26120942)
chr5 (98-176)||(28664796-28664874)
chr5 (159-195)||(15492955-15492991)
chr5 (135-187)||(26502130-26502181)
[»] chr8 (40 HSPs)
chr8 (60-201)||(34497111-34497254)
chr8 (60-201)||(14528145-14528287)
chr8 (60-201)||(30806453-30806600)
chr8 (60-201)||(19786727-19786869)
chr8 (98-201)||(29382360-29382464)
chr8 (1-180)||(25182333-25182509)
chr8 (82-201)||(24114262-24114385)
chr8 (100-200)||(24904630-24904731)
chr8 (120-195)||(17101914-17101990)
chr8 (98-201)||(24269594-24269697)
chr8 (82-187)||(27659455-27659564)
chr8 (97-178)||(17509266-17509347)
chr8 (60-160)||(13697893-13697993)
chr8 (62-185)||(21314636-21314757)
chr8 (84-180)||(13314975-13315073)
chr8 (123-192)||(2637603-2637673)
chr8 (100-201)||(5850937-5851039)
chr8 (150-196)||(26615293-26615339)
chr8 (101-201)||(15238795-15238896)
chr8 (120-201)||(6884954-6885035)
chr8 (140-197)||(24110696-24110754)
chr8 (120-201)||(30122176-30122257)
chr8 (140-192)||(30783782-30783835)
chr8 (150-201)||(26008019-26008071)
chr8 (123-201)||(17976615-17976694)
chr8 (82-180)||(18448522-18448623)
chr8 (135-201)||(28276794-28276860)
chr8 (140-201)||(14006091-14006153)
chr8 (126-180)||(14075612-14075666)
chr8 (62-114)||(26394646-26394697)
chr8 (123-180)||(44011048-44011104)
chr8 (126-201)||(31288354-31288429)
chr8 (2-45)||(6885107-6885150)
chr8 (140-201)||(5052962-5053024)
chr8 (98-176)||(23893200-23893278)
chr8 (140-178)||(24723482-24723520)
chr8 (156-201)||(30235373-30235419)
chr8 (98-158)||(16403952-16404012)
chr8 (1-45)||(18448447-18448491)
chr8 (144-180)||(28317432-28317467)
[»] scaffold0005 (1 HSPs)
scaffold0005 (60-201)||(168260-168401)
[»] chr4 (52 HSPs)
chr4 (60-201)||(14648891-14649032)
chr4 (60-201)||(17671998-17672140)
chr4 (60-201)||(12578227-12578369)
chr4 (60-195)||(19636548-19636682)
chr4 (98-201)||(13692668-13692772)
chr4 (62-201)||(5679201-5679341)
chr4 (98-197)||(13908854-13908954)
chr4 (71-201)||(11490528-11490659)
chr4 (60-201)||(19092291-19092433)
chr4 (64-200)||(19929640-19929777)
chr4 (60-200)||(22175924-22176064)
chr4 (60-187)||(17337098-17337223)
chr4 (60-201)||(13128837-13128977)
chr4 (60-201)||(17951257-17951399)
chr4 (60-201)||(17955109-17955251)
chr4 (102-198)||(17216816-17216913)
chr4 (60-195)||(24639423-24639550)
chr4 (100-197)||(20315000-20315098)
chr4 (120-180)||(7582315-7582375)
chr4 (98-196)||(19492699-19492798)
chr4 (100-201)||(19882636-19882738)
chr4 (61-201)||(40227773-40227911)
chr4 (60-180)||(22357493-22357616)
chr4 (98-201)||(21323874-21323978)
chr4 (126-195)||(11093966-11094036)
chr4 (102-180)||(13992879-13992957)
chr4 (98-196)||(15164768-15164867)
chr4 (135-197)||(17709757-17709820)
chr4 (100-201)||(25121227-25121328)
chr4 (101-201)||(3774821-3774923)
chr4 (123-201)||(9737528-9737612)
chr4 (150-201)||(12318429-12318481)
chr4 (98-197)||(19562177-19562277)
chr4 (128-191)||(10589719-10589781)
chr4 (123-201)||(15047124-15047203)
chr4 (123-201)||(15107221-15107300)
chr4 (98-176)||(25094589-25094668)
chr4 (126-195)||(11521218-11521288)
chr4 (140-201)||(19900576-19900637)
chr4 (124-201)||(20829764-20829841)
chr4 (154-201)||(1833648-1833696)
chr4 (84-180)||(8969707-8969802)
chr4 (99-201)||(9052670-9052772)
chr4 (99-201)||(11933415-11933517)
chr4 (126-192)||(22526369-22526436)
chr4 (128-201)||(10107007-10107080)
chr4 (140-201)||(11700610-11700672)
chr4 (98-168)||(16730398-16730468)
chr4 (154-201)||(15050138-15050185)
chr4 (154-201)||(15104239-15104286)
chr4 (120-195)||(19374834-19374909)
chr4 (97-176)||(25097856-25097936)
[»] chr3 (46 HSPs)
chr3 (60-201)||(12805851-12805993)
chr3 (60-201)||(2167579-2167719)
chr3 (1-201)||(16245635-16245832)
chr3 (60-201)||(21325336-21325479)
chr3 (98-195)||(17438430-17438527)
chr3 (60-180)||(8319057-8319177)
chr3 (87-201)||(3116407-3116521)
chr3 (60-197)||(21303315-21303453)
chr3 (98-201)||(21301914-21302018)
chr3 (135-201)||(6289899-6289966)
chr3 (98-199)||(12411149-12411251)
chr3 (100-180)||(821515-821595)
chr3 (60-201)||(41508363-41508504)
chr3 (87-201)||(5508332-5508446)
chr3 (123-201)||(10744898-10744977)
chr3 (123-201)||(10917914-10917993)
chr3 (126-201)||(13908253-13908328)
chr3 (98-196)||(22349410-22349509)
chr3 (98-197)||(19908307-19908407)
chr3 (145-197)||(51119289-51119341)
chr3 (126-201)||(12759383-12759459)
chr3 (120-180)||(19171855-19171915)
chr3 (101-180)||(4650249-4650328)
chr3 (139-197)||(11518001-11518060)
chr3 (97-198)||(932742-932843)
chr3 (126-180)||(8557156-8557210)
chr3 (98-176)||(8889151-8889229)
chr3 (100-201)||(21825870-21825971)
chr3 (98-198)||(8770019-8770119)
chr3 (140-201)||(21083307-21083368)
chr3 (97-177)||(19925621-19925701)
chr3 (126-201)||(28728940-28729016)
chr3 (140-201)||(18458465-18458527)
chr3 (62-180)||(20429728-20429845)
chr3 (62-115)||(2723798-2723851)
chr3 (84-180)||(7495079-7495171)
chr3 (140-195)||(27542956-27543011)
chr3 (123-201)||(18736696-18736774)
chr3 (128-179)||(21019625-21019675)
chr3 (140-187)||(52517834-52517880)
chr3 (122-176)||(16229965-16230019)
chr3 (120-201)||(31286037-31286117)
chr3 (1-45)||(5508484-5508528)
chr3 (98-178)||(8765137-8765217)
chr3 (62-130)||(17155860-17155928)
chr3 (98-173)||(27413881-27413957)
[»] chr6 (53 HSPs)
chr6 (84-201)||(23143718-23143838)
chr6 (60-197)||(12183291-12183430)
chr6 (62-201)||(21907428-21907568)
chr6 (60-201)||(22567836-22567978)
chr6 (62-201)||(11176946-11177086)
chr6 (60-172)||(28933621-28933733)
chr6 (87-201)||(21672423-21672538)
chr6 (87-201)||(21679839-21679954)
chr6 (100-201)||(9726018-9726120)
chr6 (84-180)||(22410311-22410408)
chr6 (60-201)||(27737651-27737792)
chr6 (82-196)||(9516786-9516904)
chr6 (60-201)||(8241273-8241413)
chr6 (82-195)||(23844445-23844562)
chr6 (60-201)||(4339731-4339873)
chr6 (60-201)||(21688756-21688898)
chr6 (60-201)||(15466366-15466508)
chr6 (120-201)||(17729148-17729230)
chr6 (120-192)||(23645788-23645861)
chr6 (101-201)||(25927305-25927406)
chr6 (100-180)||(22566163-22566243)
chr6 (70-180)||(18075360-18075469)
chr6 (60-174)||(9838380-9838494)
chr6 (98-180)||(23231982-23232064)
chr6 (120-196)||(20005900-20005977)
chr6 (98-176)||(24657454-24657532)
chr6 (149-201)||(5624636-5624689)
chr6 (149-201)||(14079494-14079547)
chr6 (100-192)||(17299832-17299925)
chr6 (98-175)||(17827091-17827168)
chr6 (149-201)||(21932102-21932155)
chr6 (82-195)||(27124473-27124589)
chr6 (120-180)||(19244603-19244663)
chr6 (150-201)||(20145111-20145163)
chr6 (150-201)||(22187676-22187728)
chr6 (126-201)||(28586057-28586133)
chr6 (60-201)||(8039097-8039234)
chr6 (144-201)||(7543005-7543063)
chr6 (98-176)||(22413048-22413126)
chr6 (98-176)||(23009394-23009471)
chr6 (98-176)||(23778893-23778970)
chr6 (60-180)||(6630653-6630771)
chr6 (135-201)||(20722213-20722278)
chr6 (148-195)||(26587622-26587670)
chr6 (103-197)||(24251516-24251611)
chr6 (98-157)||(24252228-24252287)
chr6 (98-176)||(21841687-21841765)
chr6 (127-180)||(17382163-17382216)
chr6 (150-201)||(2586717-2586769)
chr6 (99-201)||(9898958-9899062)
chr6 (157-200)||(20002440-20002484)
chr6 (126-201)||(28589457-28589533)
chr6 (160-195)||(34092327-34092363)
[»] chr1 (54 HSPs)
chr1 (63-201)||(22664202-22664341)
chr1 (60-201)||(24281273-24281415)
chr1 (64-198)||(13345302-13345436)
chr1 (60-201)||(147627-147768)
chr1 (82-198)||(12208600-12208720)
chr1 (98-199)||(21449087-21449189)
chr1 (82-198)||(25405610-25405730)
chr1 (60-201)||(17359158-17359297)
chr1 (98-196)||(17610255-17610354)
chr1 (82-198)||(15543946-15544066)
chr1 (60-193)||(33190681-33190815)
chr1 (82-198)||(14779564-14779684)
chr1 (71-194)||(16179010-16179137)
chr1 (82-178)||(21666588-21666687)
chr1 (65-180)||(24214562-24214677)
chr1 (98-198)||(18736239-18736340)
chr1 (102-201)||(21847630-21847729)
chr1 (94-201)||(23038007-23038114)
chr1 (60-201)||(9787840-9787982)
chr1 (100-201)||(17837513-17837615)
chr1 (82-198)||(29242518-29242638)
chr1 (135-198)||(24306341-24306405)
chr1 (60-201)||(22620258-22620400)
chr1 (98-198)||(21987981-21988082)
chr1 (98-178)||(16069550-16069630)
chr1 (70-173)||(51473849-51473950)
chr1 (127-201)||(12012828-12012903)
chr1 (135-201)||(26540892-26540958)
chr1 (60-111)||(28008192-28008243)
chr1 (120-201)||(3591674-3591756)
chr1 (82-198)||(21334699-21334819)
chr1 (120-178)||(22622910-22622968)
chr1 (100-201)||(24267783-24267885)
chr1 (84-180)||(31236032-31236129)
chr1 (149-201)||(32383048-32383101)
chr1 (91-201)||(15813516-15813628)
chr1 (98-201)||(16787725-16787829)
chr1 (97-176)||(16916931-16917011)
chr1 (150-201)||(27117769-27117821)
chr1 (120-180)||(44795387-44795446)
chr1 (87-201)||(15813143-15813257)
chr1 (62-108)||(18100976-18101022)
chr1 (120-201)||(26648992-26649073)
chr1 (123-176)||(24054001-24054053)
chr1 (98-180)||(9401526-9401605)
chr1 (142-201)||(17121523-17121582)
chr1 (98-178)||(18830501-18830581)
chr1 (140-180)||(34480987-34481027)
chr1 (140-198)||(18825655-18825713)
chr1 (122-176)||(23179819-23179874)
chr1 (98-176)||(727489-727567)
chr1 (128-201)||(25958105-25958178)
chr1 (159-201)||(33712660-33712702)
chr1 (100-172)||(24306957-24307028)
[»] scaffold0062 (2 HSPs)
scaffold0062 (60-176)||(43188-43304)
scaffold0062 (1-45)||(43132-43176)
[»] scaffold0008 (3 HSPs)
scaffold0008 (60-201)||(54856-54999)
scaffold0008 (144-198)||(48235-48290)
scaffold0008 (98-177)||(234362-234441)
[»] scaffold0638 (1 HSPs)
scaffold0638 (97-195)||(821-919)
[»] scaffold0838 (1 HSPs)
scaffold0838 (60-196)||(2371-2508)
[»] scaffold0832 (1 HSPs)
scaffold0832 (60-196)||(2402-2539)
[»] scaffold0056 (1 HSPs)
scaffold0056 (98-175)||(21299-21376)
[»] scaffold0016 (1 HSPs)
scaffold0016 (98-178)||(3551-3631)
[»] scaffold0427 (1 HSPs)
scaffold0427 (60-162)||(2778-2881)
[»] scaffold0155 (1 HSPs)
scaffold0155 (60-180)||(35956-36076)
[»] scaffold0650 (1 HSPs)
scaffold0650 (120-201)||(6283-6365)
[»] scaffold0035 (1 HSPs)
scaffold0035 (98-199)||(69911-70013)
[»] scaffold0024 (1 HSPs)
scaffold0024 (60-180)||(39602-39723)
[»] scaffold0043 (1 HSPs)
scaffold0043 (123-201)||(89878-89956)
[»] scaffold1869 (1 HSPs)
scaffold1869 (120-197)||(410-488)
[»] scaffold0136 (1 HSPs)
scaffold0136 (128-201)||(15494-15568)
[»] scaffold0001 (1 HSPs)
scaffold0001 (135-201)||(69078-69144)
[»] scaffold0102 (1 HSPs)
scaffold0102 (60-197)||(35537-35675)
[»] scaffold0034 (1 HSPs)
scaffold0034 (98-176)||(76439-76518)
[»] scaffold0672 (1 HSPs)
scaffold0672 (127-180)||(1752-1805)
[»] scaffold0957 (1 HSPs)
scaffold0957 (120-201)||(3149-3230)
[»] scaffold0653 (1 HSPs)
scaffold0653 (100-201)||(4484-4586)
[»] scaffold0054 (1 HSPs)
scaffold0054 (150-195)||(72074-72120)
[»] scaffold0042 (1 HSPs)
scaffold0042 (76-195)||(29909-30027)
[»] scaffold0019 (2 HSPs)
scaffold0019 (126-172)||(11266-11312)
scaffold0019 (99-196)||(181706-181803)
[»] scaffold0620 (1 HSPs)
scaffold0620 (160-195)||(7661-7697)
[»] scaffold0394 (1 HSPs)
scaffold0394 (154-201)||(13963-14010)
[»] scaffold0263 (1 HSPs)
scaffold0263 (1-41)||(15800-15840)
[»] scaffold0048 (1 HSPs)
scaffold0048 (126-201)||(78590-78666)


Alignment Details
Target: chr7 (Bit Score: 136; Significance: 4e-71; HSPs: 82)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 4786034 - 4785833
Alignment:
Q  1 ttttctgcaaccaaaaacaggtaacttgctctatttcaaatagatnnnnnnnnnnnnnn-tctctaacccttaactcttttattttatatcgtcaactaa 99  Q
    ||||||||||||||||||||||||||||||||||| |||||||||               ||||||||||||||||||||||||||||||||||||||||    
T  4786034 ttttctgcaaccaaaaacaggtaacttgctctattgcaaatagataaaaaaaattaaaaatctctaacccttaactcttttattttatatcgtcaactaa 4785935  T
Q  100 aaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggtaacgatttgatacacttgcct 199  Q
    ||||||||||| |||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4785934 aaataagtaacgtgaagtgcttggacgaaacgacaatccctgtggatgtgatactctacttatcactttattacttggtaacgatttgatacacttgcct 4785835  T
Q  200 aa 201  Q
    ||    
T  4785834 aa 4785833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 130; E-Value: 1e-67
Query Start/End: Original strand, 60 - 201
Target Start/End: Complemental strand, 4818974 - 4818833
Alignment:
Q  60 tctctaacccttaactcttttattttatatcgtcaactaaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctact 159  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||| ||||||||||||    
T  4818974 tctctaacccttaactcttttattttatatcgtcaactaaaaataagtaacgtgaagtgcttggacgaaacgacaatccctgtggatgtgatactctact 4818875  T
Q  160 tatcactttattacttggtaacgatttgatacacttgcctaa 201  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  4818874 tatcactttattacttggtaacgatttgatacacttgcctaa 4818833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 60 - 201
Target Start/End: Complemental strand, 7318411 - 7318269
Alignment:
Q  60 tctctaacccttaactcttttattttatatcgtcaactaaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctact 159  Q
    ||||||||||||| |||||||||||||||||||||||| |||||||||||   ||  || || ||||||||||| |||| |||||||| |||||||||||    
T  7318411 tctctaacccttatctcttttattttatatcgtcaacttaaaataagtaatgcgagctgtttagacgaaacgacaatccatgtggatacgatactctact 7318312  T
Q  160 tatcactttattacttggt-aacgatttgatacacttgcctaa 201  Q
    ||||||||||||||||||| |||||| || |||||||||||||    
T  7318311 tatcactttattacttggtaaacgatatggtacacttgcctaa 7318269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 64 - 201
Target Start/End: Original strand, 10586989 - 10587127
Alignment:
Q  64 taacccttaactcttttattttatatcgtcaactaaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatc 163  Q
    |||||||||  ||||||||||||||| || |||| ||||||||||||||||  || || ||||||||||| |||||||| |||| |||||||||||||||    
T  10586989 taacccttatttcttttattttatattgtaaacttaaaataagtaacatgagttgtttagacgaaacgacaatccctgtagatacgatactctacttatc 10587088  T
Q  164 actttattacttggt-aacgatttgatacacttgcctaa 201  Q
    ||||||||||||||| ||||||||| |||||||||||||    
T  10587089 actttattacttggtaaacgatttggtacacttgcctaa 10587127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 64 - 180
Target Start/End: Complemental strand, 3734730 - 3734614
Alignment:
Q  64 taacccttaactcttttattttatatcgtcaactaaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatc 163  Q
    |||||||||||||||||||||||||||||||||| |||||||||||| |||| || |||||| |||| || || | |||||||| |||||||||||||||    
T  3734730 taacccttaactcttttattttatatcgtcaacttaaaataagtaacgtgaattgtttggaccaaacaacaattcatgtggatacgatactctacttatc 3734631  T
Q  164 actttattacttggtaa 180  Q
    |||||||||||||||||    
T  3734630 actttattacttggtaa 3734614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 60 - 195
Target Start/End: Original strand, 17153115 - 17153251
Alignment:
Q  60 tctctaacccttaactcttttattttatatcgtcaactaaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctact 159  Q
    ||||||||||||| |||||||||||||| ||||||||| ||||||||||||  ||  || || ||||||||||| |||  |||||||| |||||||||||    
T  17153115 tctctaacccttatctcttttattttatgtcgtcaacttaaaataagtaacgcgagctgtttagacgaaacgacaatctatgtggatacgatactctact 17153214  T
Q  160 tatcactttattacttggt-aacgatttgatacactt 195  Q
    ||||||||| ||||||||| ||| |||||||||||||    
T  17153215 tatcactttcttacttggtaaactatttgatacactt 17153251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 70 - 198
Target Start/End: Original strand, 8054457 - 8054589
Alignment:
Q  70 ttaactcttttattttatatcgtcaact---aaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcact 166  Q
    ||||||||| | ||||||||||||||||   |||||||||||||| ||| || |||||||||||||| || |||||| ||| ||||||||||||||||||    
T  8054457 ttaactcttatcttttatatcgtcaacttacaaaaataagtaacaagaattgtttggacgaaacgacaattcctgtgaatacgatactctacttatcact 8054556  T
Q  167 ttattacttggt-aacgatttgatacacttgcc 198  Q
    |||||| ||||| ||||||||| ||||||||||    
T  8054557 ttattatttggtaaacgatttggtacacttgcc 8054589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 60 - 180
Target Start/End: Original strand, 8313353 - 8313476
Alignment:
Q  60 tctctaacccttaactcttttattttatatcgtcaactaaaaataagtaaca---tgaagtgcttggacgaaacgacgatccctgtggatatgatactct 156  Q
    ||||||||||||||||||||||||||||| | |||||| |||||||||||||   | |  || || ||||||||||| ||||||||||||| |||| |||    
T  8313353 tctctaacccttaactcttttattttataccttcaacttaaaataagtaacacaattagttgtttagacgaaacgacaatccctgtggatacgataatct 8313452  T
Q  157 acttatcactttattacttggtaa 180  Q
    ||||||||||||||||||||||||    
T  8313453 acttatcactttattacttggtaa 8313476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 62 - 201
Target Start/End: Complemental strand, 9574543 - 9574403
Alignment:
Q  62 tctaacccttaactcttttattttatatcgtcaactaaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctactta 161  Q
    |||||||||||||||||||||||||||||||||||| ||||||| ||||  ||   | || |||||||| || ||| |||| |||| |||||||||||||    
T  9574543 tctaacccttaactcttttattttatatcgtcaacttaaaataaataacgcgagtcgtttagacgaaacaacaatctctgtagatacgatactctactta 9574444  T
Q  162 tcactttattacttggt-aacgatttgatacacttgcctaa 201  Q
    |||||||||| |||||| ||||||||  |||||||||||||    
T  9574443 tcactttattccttggtaaacgatttagtacacttgcctaa 9574403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 60 - 201
Target Start/End: Complemental strand, 4986693 - 4986551
Alignment:
Q  60 tctctaacccttaactcttttattttatatcgtcaactaaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctact 159  Q
    ||||||||||||||| |||||||||| ||||||||||| ||||||||||||  ||  |  || ||||||||||| |||| ||||| ||  ||||||||||    
T  4986693 tctctaacccttaacacttttattttttatcgtcaacttaaaataagtaacgcgagctatttagacgaaacgacaatccatgtgggtactatactctact 4986594  T
Q  160 tatcactttattacttggt-aacgatttgatacacttgcctaa 201  Q
     | |||||||||||||||| ||||||||| |||||||| ||||    
T  4986593 cagcactttattacttggtaaacgatttggtacacttgtctaa 4986551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 60 - 201
Target Start/End: Complemental strand, 4990791 - 4990649
Alignment:
Q  60 tctctaacccttaactcttttattttatatcgtcaactaaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctact 159  Q
    ||||||||||||||| |||||||||| ||||||||||| ||||||||||||  ||  |  || ||||||||||| |||| ||||| ||  ||||||||||    
T  4990791 tctctaacccttaacacttttattttttatcgtcaacttaaaataagtaacgcgagctatttagacgaaacgacaatccatgtgggtactatactctact 4990692  T
Q  160 tatcactttattacttggt-aacgatttgatacacttgcctaa 201  Q
     | |||||||||||||||| ||||||||| |||||||| ||||    
T  4990691 cagcactttattacttggtaaacgatttggtacacttgtctaa 4990649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 98 - 195
Target Start/End: Original strand, 13759859 - 13759957
Alignment:
Q  98 aaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aacgatttgatacactt 195  Q
    |||||||||||||  ||| || |||||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||| ||||||||| |||||||    
T  13759859 aaaaataagtaacgcgaactgtttggacgaaacgacaatccttgtggatatgatactctacttatcactttattaattggtaaacgatttggtacactt 13759957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 60 - 201
Target Start/End: Complemental strand, 15869733 - 15869591
Alignment:
Q  60 tctctaacccttaactcttttattttatatcgtcaactaaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctact 159  Q
    |||| |||||||| || ||||||||||||||||||||| ||||||||||||    | |  || ||| |||| |  |||| || ||||| |||||||||||    
T  15869733 tctcaaacccttatctattttattttatatcgtcaacttaaaataagtaacgcagactatttagacaaaacaaaaatccttgcggatacgatactctact 15869634  T
Q  160 tatcactttattacttggt-aacgatttgatacacttgcctaa 201  Q
    ||||||||||||||||||| |||||||||||||||||||||||    
T  15869633 tatcactttattacttggtaaacgatttgatacacttgcctaa 15869591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 60 - 195
Target Start/End: Complemental strand, 16365842 - 16365707
Alignment:
Q  60 tctctaacccttaactcttttattttatatcgtcaact-aaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctac 158  Q
    ||||||| ||||||||||||||||  |||||||||||| |||||||||||||  ||| || ||| || ||||||| |||| |||||||| ||||||||||    
T  16365842 tctctaaaccttaactcttttatt--atatcgtcaacttaaaaataagtaacgcgaattgtttgcacaaaacgacaatccatgtggatacgatactctac 16365745  T
Q  159 ttatcactttattacttggt-aacgatttgatacactt 195  Q
    || | ||||||||||||||| ||||||||| |||||||    
T  16365744 tttttactttattacttggtaaacgatttggtacactt 16365707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 100 - 197
Target Start/End: Complemental strand, 18662539 - 18662441
Alignment:
Q  100 aaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aacgatttgatacacttgc 197  Q
    ||||||||||| |||| || |||||||||||||| |||| |||||||| ||||||||||||||||||||| | |||||| |||||||||||||||||||    
T  18662539 aaataagtaacgtgaattgtttggacgaaacgacaatccttgtggatacgatactctacttatcactttagtgcttggtaaacgatttgatacacttgc 18662441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 123 - 201
Target Start/End: Original strand, 9864350 - 9864429
Alignment:
Q  123 gacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aacgatttgatacacttgcctaa 201  Q
    ||||||||||| |||| ||||||||||||||||||||||||||||||||||||||| ||| ||||| |||||||||||||    
T  9864350 gacgaaacgacaatccttgtggatatgatactctacttatcactttattacttggtaaacaatttggtacacttgcctaa 9864429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 62 - 201
Target Start/End: Original strand, 23099916 - 23100055
Alignment:
Q  62 tctaaccctt-aactcttttattttatatcgtcaactaaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctactt 160  Q
    |||||||||| |||||||||||||||  |  ||||||||| ||||||  |  ||| || |||||||||||||| |||  |||||||| ||||||||||||    
T  23099916 tctaaccctttaactcttttattttactt--tcaactaaacataagtgtcgggaattgtttggacgaaacgacaatctatgtggatacgatactctactt 23100013  T
Q  161 atcactttattacttggt-aacgatttgatacacttgcctaa 201  Q
    |||||||||||| ||||| ||||||||| |||||||||||||    
T  23100014 atcactttattatttggtaaacgatttggtacacttgcctaa 23100055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 71 - 201
Target Start/End: Original strand, 9731600 - 9731730
Alignment:
Q  71 taactcttttattttatatcgtcaa-ctaaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcacttta 169  Q
    |||||||||||||||||  | |||| |||||||||||||||  ||| || |||||||||||||| |||| ||||| || |||||||||||||||||||||    
T  9731600 taactcttttattttat--catcaaactaaaaataagtaacgcgaattgtttggacgaaacgacaatccttgtggttacgatactctacttatcacttta 9731697  T
Q  170 ttacttggt-aacgatttgatacacttgcctaa 201  Q
     |||||  | ||||||||| |||||||||||||    
T  9731698 ctactttttaaacgatttggtacacttgcctaa 9731730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 99 - 199
Target Start/End: Complemental strand, 31493029 - 31492928
Alignment:
Q  99 aaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aacgatttgatacacttgc 197  Q
    ||||||||||| |  || || |||||| ||||||| |||| |||||||| ||||||||||||||||||||||||| |||| |||||||||||||||||||    
T  31493029 aaaataagtaaaacaaattgtttggacaaaacgacaatccatgtggatacgatactctacttatcactttattacctggtaaacgatttgatacacttgc 31492930  T
Q  198 ct 199  Q
    ||    
T  31492929 ct 31492928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 126 - 201
Target Start/End: Complemental strand, 10937674 - 10937598
Alignment:
Q  126 gaaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aacgatttgatacacttgcctaa 201  Q
    |||||||| |||| |||||||| |||||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  10937674 gaaacgacaatccatgtggatacgatactatacttatcactttattacttggtaaacgatttgatacacttgcctaa 10937598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 97 - 180
Target Start/End: Original strand, 18368978 - 18369061
Alignment:
Q  97 taaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggtaa 180  Q
    ||||||||||||||  ||| || |||||||||||||| |||||| ||||||  |||||||||||||||||||||||||||||||    
T  18368978 taaaaataagtaactagaattgtttggacgaaacgacaatccctatggatacaatactctacttatcactttattacttggtaa 18369061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 100 - 197
Target Start/End: Complemental strand, 2563915 - 2563818
Alignment:
Q  100 aaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aacgatttgatacacttgc 197  Q
    ||||||||||||  || || |||||||||||||| |||| |||||||| ||||||||||||| |||||||||||||||| ||||||||| |||||||||    
T  2563915 aaataagtaacacaaattgtttggacgaaacgacaatccttgtggatacgatactctactta-cactttattacttggtaaacgatttggtacacttgc 2563818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 60 - 174
Target Start/End: Original strand, 3191020 - 3191134
Alignment:
Q  60 tctctaacccttaactcttttattttatatcgtcaactaaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctact 159  Q
    ||||||||||  ||| ||||| ||||||||| |||||| ||||||| ||||| ||| || |||||||||||||| |||||| | ||||| ||||| ||||    
T  3191020 tctctaacccaaaacccttttgttttatatcctcaacttaaaataaataacacgaattgtttggacgaaacgacaatccctatagatataatactttact 3191119  T
Q  160 tatcactttattact 174  Q
    | |||||||||||||    
T  3191120 tttcactttattact 3191134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 99 - 180
Target Start/End: Original strand, 8979006 - 8979087
Alignment:
Q  99 aaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggtaa 180  Q
    |||||||||||   ||| || ||||||||||| || |||| |||||||||||||||||||||||||||||||||||||||||    
T  8979006 aaaataagtaatgcgaattgtttggacgaaacaacaatccatgtggatatgatactctacttatcactttattacttggtaa 8979087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 98 - 175
Target Start/End: Complemental strand, 11803180 - 11803103
Alignment:
Q  98 aaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattactt 175  Q
    |||||||||||||  ||| || |||||||||| ||| ||||||||||||| |||||||||||||||||||||||||||    
T  11803180 aaaaataagtaacgcgaattgtttggacgaaaggacaatccctgtggatacgatactctacttatcactttattactt 11803103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 87 - 201
Target Start/End: Complemental strand, 1584654 - 1584541
Alignment:
Q  87 tatcgtcaactaaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggtaacgattt 186  Q
    ||||||||||| ||||||||||||  ||  || || |||||||| || ||||||||||||| ||||||| ||||||||||||||||||||||||    ||    
T  1584654 tatcgtcaacttaaaataagtaacgcgatttgtttagacgaaacaacaatccctgtggatacgatactc-acttatcactttattacttggtaaatgatt 1584556  T
Q  187 gatacacttgcctaa 201  Q
    | |||||||||||||    
T  1584555 ggtacacttgcctaa 1584541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 60 - 201
Target Start/End: Complemental strand, 1587818 - 1587677
Alignment:
Q  60 tctctaacccttaactcttttattttatatcgtcaactaaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctact 159  Q
    ||||||||||| || |||||||||||||||||||||   |||||| |||||  ||| || ||||| ||||| || |||  ||| |||||||||||||| |    
T  1587818 tctctaaccctaaa-tcttttattttatatcgtcaaaacaaaataggtaacgcgaattgtttggatgaaacaactatctatgtagatatgatactctaat 1587720  T
Q  160 tatcactttattacttggt-aacgatttgatacacttgcctaa 201  Q
    |||||||||| ||||| || ||||||||| |||| ||||||||    
T  1587719 tatcactttactacttagtaaacgatttggtacatttgcctaa 1587677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 120 - 201
Target Start/End: Original strand, 3329679 - 3329761
Alignment:
Q  120 ttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aacgatttgatacacttgcctaa 201  Q
    ||||| |||||||| |||| |||||||| |||||||||||||||||||||||||||||| ||  ||||||||||||| |||||    
T  3329679 ttggatgaaacgacaatccatgtggatacgatactctacttatcactttattacttggtaaataatttgatacacttacctaa 3329761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 100 - 201
Target Start/End: Complemental strand, 21230410 - 21230308
Alignment:
Q  100 aaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aacgatttgatacacttgcc 198  Q
    ||||||||||||  || ||||| ||||||||||  |||||| || ||| |||||||||||||||| ||||||| ||||| |||||||||||| |||||||    
T  21230410 aaataagtaacacaaattgcttagacgaaacgataatccctatgaatacgatactctacttatcattttattatttggtaaacgatttgatatacttgcc 21230311  T
Q  199 taa 201  Q
    |||    
T  21230310 taa 21230308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 60 - 201
Target Start/End: Complemental strand, 12181746 - 12181604
Alignment:
Q  60 tctctaaccctt-aactcttttattttatatcgtcaactaaaaataagtaacatgaagtgcttgg-acgaaacgacgatccctgtggatatgatactcta 157  Q
    |||||||||||| |||||||||| |||||  |||||||| ||||||||||||  ||| || |||| |||||||||| || | |||||||| | |||||||    
T  12181746 tctctaacccttcaactcttttaatttat--cgtcaacttaaaataagtaactcgaattgtttgggacgaaacgacaattcatgtggatacggtactcta 12181649  T
Q  158 cttatcactttattacttggt-aacgatttgatacacttgcctaa 201  Q
    ||| ||||||||||||||  | ||||||||| || ||||||||||    
T  12181648 cttctcactttattactttataaacgatttggtatacttgcctaa 12181604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 98 - 198
Target Start/End: Original strand, 1848226 - 1848325
Alignment:
Q  98 aaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggtaacgatttgatacacttgc 197  Q
    |||||||||||||   || || |||||||||| ||| ||||| ||||||| |||||| ||||||||||||||||||||||| || ||||| |||||||||    
T  1848226 aaaaataagtaacgcaaattgtttggacgaaaggacaatcccagtggatacgatactgtacttatcactttattacttggt-acaatttggtacacttgc 1848324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 60 - 194
Target Start/End: Original strand, 7492225 - 7492358
Alignment:
Q  60 tctctaacccttaactcttttattttatatcgtcaac-taaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctac 158  Q
    ||||||||||||||||||||||||  ||||| ||||  |||||||||||||    || || ||| ||||||| || |||| |||||||| ||||||||||    
T  7492225 tctctaacccttaactcttttatt--atatcatcaaaataaaaataagtaatgcaaattgtttgaacgaaacaacaatccttgtggatacgatactctac 7492322  T
Q  159 ttatcactttattacttggtaacgatttgatacact 194  Q
    |||||| ||||||||| | |||| ||||| ||||||    
T  7492323 ttatcattttattactggataacaatttggtacact 7492358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 70 - 198
Target Start/End: Original strand, 8054029 - 8054158
Alignment:
Q  70 ttaactcttttattttatatcgtcaact---aaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcact 166  Q
    ||||||||| | ||||||||||||||||   ||||||||||||   ||| || |||||   |||||| || | |||||||| ||||||||| ||||||||    
T  8054029 ttaactcttatcttttatatcgtcaacttacaaaaataagtaatgagaattgtttgga---aacgacaattcatgtggatacgatactctaattatcact 8054125  T
Q  167 ttattacttggt-aacgatttgatacacttgcc 198  Q
    |||||||||||| ||||||||| ||||||||||    
T  8054126 ttattacttggtaaacgatttggtacacttgcc 8054158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 99 - 190
Target Start/End: Complemental strand, 10648677 - 10648585
Alignment:
Q  99 aaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aacgatttgata 190  Q
    ||||||||||||| ||| || || || |||||||| |||| || | ||||||||||||| |||||||||||||||||||| ||||||||||||    
T  10648677 aaaataagtaacacgaattgtttagatgaaacgacaatccgtgcgcatatgatactctatttatcactttattacttggtaaacgatttgata 10648585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 82 - 172
Target Start/End: Complemental strand, 17077247 - 17077154
Alignment:
Q  82 ttttatatcgtcaact---aaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttatta 172  Q
    ||||||| ||||||||   |||||||||||||||||| || |||||||||||||| |||||  ||||||  ||||||||| |||||||||||||    
T  17077247 ttttataccgtcaacttacaaaaataagtaacatgaattgtttggacgaaacgacaatccccatggatacaatactctacctatcactttatta 17077154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 140 - 201
Target Start/End: Complemental strand, 5797569 - 5797507
Alignment:
Q  140 tgtggatatgatactctacttatcactttattacttggtaa-cgatttgatacacttgcctaa 201  Q
    |||||||| |||||||||||||| ||||||||||||||||| ||||||| |||||||||||||    
T  5797569 tgtggatacgatactctacttattactttattacttggtaagcgatttgttacacttgcctaa 5797507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 124 - 197
Target Start/End: Original strand, 11221189 - 11221263
Alignment:
Q  124 acgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aacgatttgatacacttgc 197  Q
    |||||||||| |||||||||||||  ||||||||||||||| |||||||||| || ||||||||| |||||||||    
T  11221189 acgaaacgacaatccctgtggatacaatactctacttatcaatttattacttagtaaacgatttggtacacttgc 11221263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 180
Target Start/End: Complemental strand, 5108643 - 5108584
Alignment:
Q  120 ttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggtaa 180  Q
    |||||||||||||| |||| |||||||| ||||||||||||| ||||||||||||||||||    
T  5108643 ttggacgaaacgacaatccttgtggatacgatactctactta-cactttattacttggtaa 5108584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 94 - 201
Target Start/End: Complemental strand, 6042564 - 6042457
Alignment:
Q  94 aactaaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aacgatttgataca 192  Q
    |||||||||||||||||   || || ||| |||||||||| | | ||||||||| ||||||||||||| || |||||||| |||| ||||||||||||||    
T  6042564 aactaaaaataagtaacgcaaattgtttgaacgaaacgacaacctctgtggatacgatactctactta-cattttattacatggtaaacgatttgataca 6042466  T
Q  193 cttgcctaa 201  Q
    |||| ||||    
T  6042465 cttgtctaa 6042457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 126 - 201
Target Start/End: Complemental strand, 18449314 - 18449238
Alignment:
Q  126 gaaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aacgatttgatacacttgcctaa 201  Q
    |||||||| |||||| |||||| |||| | ||||| ||||||||||||||||| ||| |||||||||||||||||||    
T  18449314 gaaacgacaatccctatggatacgatattatacttctcactttattacttggtaaacaatttgatacacttgcctaa 18449238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 82 - 198
Target Start/End: Complemental strand, 20582375 - 20582258
Alignment:
Q  82 ttttatatcgtcaact---aaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt 178  Q
    ||||||||||||||||   |||| ||||||||  ||| ||  |||| |||||||||||||||||||||| |||||   |||||||||||||||| |||||    
T  20582375 ttttatatcgtcaacttataaaattaagtaacgagaattgtatggaagaaacgacgatccctgtggatacgatac---acttatcactttattaattggt 20582279  T
Q  179 -aacgatttgatacacttgcc 198  Q
     ||||||||| ||| ||||||    
T  20582278 aaacgatttggtacccttgcc 20582258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 63 - 201
Target Start/End: Complemental strand, 6013728 - 6013589
Alignment:
Q  63 ctaacccttaactcttttattttatatcgtcaactaaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttat 162  Q
    ||||||||| |||||||||||||||||| ||||   |||||||||||    || || |||||  ||| ||  |||| |||||||| ||||||||||||||    
T  6013728 ctaaccctttactcttttattttatatcatcaaactaaaataagtaaagccaattgtttggataaaatgagaatccttgtggatacgatactctacttat 6013629  T
Q  163 cactttattacttggt-aacgatttgatacacttgcctaa 201  Q
    ||||| | |||||| | || |||||| |||||||||||||    
T  6013628 cacttaagtacttgataaatgatttggtacacttgcctaa 6013589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 82 - 198
Target Start/End: Complemental strand, 13418653 - 13418533
Alignment:
Q  82 ttttatatcgtcaact---aaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcac-tttattacttgg 177  Q
    ||||||| ||||||||   |||||||||||||   || || |||||||||| ||| |||||| |||||| ||||||||||||||||| ||||||||||||    
T  13418653 ttttataccgtcaacttaaaaaaataagtaacgacaaatgtttggacgaaaggacaatccctatggatacgatactctacttatcacttttattacttgg 13418554  T
Q  178 -taacgatttgatacacttgcc 198  Q
     |||||| ||| ||||||||||    
T  13418553 ttaacga-ttggtacacttgcc 13418533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 99 - 201
Target Start/End: Original strand, 16297820 - 16297923
Alignment:
Q  99 aaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aacgatttgatacacttgc 197  Q
    |||||||||||  |||| || |||||||||| ||| |||| |||| ||| |||| |||||||||||| |||||||||||| ||  ||||| |||||||||    
T  16297820 aaaataagtaatgtgaattgtttggacgaaatgacaatccatgtgaatacgataatctacttatcacattattacttggtaaattatttggtacacttgc 16297919  T
Q  198 ctaa 201  Q
    ||||    
T  16297920 ctaa 16297923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 100 - 175
Target Start/End: Complemental strand, 18467549 - 18467474
Alignment:
Q  100 aaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattactt 175  Q
    ||||||||||||| || || || ||||||||||| |||| ||||||||  ||||| ||||||||||||||||||||    
T  18467549 aaataagtaacataaattgtttagacgaaacgacaatccatgtggatacaatactttacttatcactttattactt 18467474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 120 - 201
Target Start/End: Original strand, 2350768 - 2350850
Alignment:
Q  120 ttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aacgatttgatacacttgcctaa 201  Q
    |||||| ||||||| |||| |||||||| |||| |||||||| || ||||||||||||| || |||||| |||||||||||||    
T  2350768 ttggacaaaacgacaatccatgtggatacgataatctacttagcagtttattacttggtaaatgatttggtacacttgcctaa 2350850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 98 - 176
Target Start/End: Complemental strand, 4449080 - 4449002
Alignment:
Q  98 aaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttg 176  Q
    |||||||||||||| ||| || |||||| ||| |||  ||||||||||||  ||||| |||||||||||||||||||||    
T  4449080 aaaaataagtaacaagaattgtttggacaaaaggacagtccctgtggatacaatactttacttatcactttattacttg 4449002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 100 - 201
Target Start/End: Complemental strand, 5530119 - 5530017
Alignment:
Q  100 aaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aacgatttgatacacttgcc 198  Q
    ||||||||||||  || || |||||||||||||  ||| ||||||||| ||| || ||||||||| ||||||||||||| ||| ||||| ||||| ||||    
T  5530119 aaataagtaacacaaattgtttggacgaaacgaaaatctctgtggatacgatgctttacttatcattttattacttggtaaacaatttggtacacctgcc 5530020  T
Q  199 taa 201  Q
    |||    
T  5530019 taa 5530017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 100 - 201
Target Start/End: Original strand, 10584487 - 10584589
Alignment:
Q  100 aaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aacgatttgatacacttgcc 198  Q
    |||||||||||| ||| || ||  | |||||||| |||| |||||||| |||||| | ||||||||||||||||||| | ||||||||| |||||||| |    
T  10584487 aaataagtaacacgaattgtttctatgaaacgacaatccatgtggatacgatactttgcttatcactttattacttgataaacgatttggtacacttgtc 10584586  T
Q  199 taa 201  Q
    |||    
T  10584587 taa 10584589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 98 - 180
Target Start/End: Original strand, 39273174 - 39273256
Alignment:
Q  98 aaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggtaa 180  Q
    ||||||||||||||  || |  |||||||||||||| |||| | || ||| ||||||||||||||||||||||||||| ||||    
T  39273174 aaaaataagtaacacaaattatttggacgaaacgacaatccatatgaatacgatactctacttatcactttattacttagtaa 39273256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 100 - 200
Target Start/End: Complemental strand, 4579195 - 4579095
Alignment:
Q  100 aaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aacgatttgatacacttgcc 198  Q
    |||||||||||| ||| || |||||| ||| ||| ||| || |||||| ||||||||||||||||| ||||||||| || |||||||||  |||||||||    
T  4579195 aaataagtaacacgaattgtttggacaaaaagacaatctctttggatacgatactctacttatcac-ttattacttagtaaacgatttggaacacttgcc 4579097  T
Q  199 ta 200  Q
    ||    
T  4579096 ta 4579095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 150 - 195
Target Start/End: Original strand, 21102344 - 21102389
Alignment:
Q  150 atactctacttatcactttattacttggtaacgatttgatacactt 195  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||    
T  21102344 atactctacttatcactttattacttggtaacgattcaatacactt 21102389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 149 - 201
Target Start/End: Complemental strand, 33035521 - 33035469
Alignment:
Q  149 gatactctacttatcactttattacttggtaacgatttgatacacttgcctaa 201  Q
    |||||||||| ||||||||||||||| |  |||||||||||||||||||||||    
T  33035521 gatactctacctatcactttattactggtaaacgatttgatacacttgcctaa 33035469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 84 - 201
Target Start/End: Complemental strand, 12329797 - 12329678
Alignment:
Q  84 ttatatcgtcaact-aaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aac 181  Q
    |||||||||||||| |||||||||||||  | | |  |||| | ||||||| |||| ||||||||  |||||||| |||||| ||| ||||||||| |||    
T  12329797 ttatatcgtcaacttaaaaataagtaacgcggattatttgggcaaaacgacaatccttgtggatactatactctatttatcaatttcttacttggtaaac 12329698  T
Q  182 gatttgatacacttgcctaa 201  Q
    |||||| |||| ||||||||    
T  12329697 gatttggtacatttgcctaa 12329678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 123 - 201
Target Start/End: Original strand, 14755154 - 14755233
Alignment:
Q  123 gacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aacgatttgatacacttgcctaa 201  Q
    |||||||| || || | ||||||||||||||||||||| |||||||| |||||| | ||||||||| |||||||| ||||    
T  14755154 gacgaaacaacaatacttgtggatatgatactctacttctcactttactacttgataaacgatttggtacacttgtctaa 14755233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 60 - 110
Target Start/End: Complemental strand, 1584370 - 1584320
Alignment:
Q  60 tctctaacccttaactcttttattttatatcgtcaactaaaaataagtaac 110  Q
    ||||||||| ||||||||||||||||||||||||||   ||||||||||||    
T  1584370 tctctaacctttaactcttttattttatatcgtcaaaacaaaataagtaac 1584320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 126 - 199
Target Start/End: Original strand, 21912507 - 21912581
Alignment:
Q  126 gaaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aacgatttgatacacttgcct 199  Q
    |||||||| ||||| || |||| ||||||| |||||||||||||||| ||| | ||| |||||||||||||||||    
T  21912507 gaaacgacaatccccgtagatacgatactcaacttatcactttattatttgataaacaatttgatacacttgcct 21912581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 175
Target Start/End: Complemental strand, 17203123 - 17203047
Alignment:
Q  98 aaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattactt 175  Q
    |||||||||||||  | | || |||||||||||||| ||||| ||| ||| |||||||||||||| ||||||||||||    
T  17203123 aaaaataagtaacgcggattgtttggacgaaacgacaatccccgtgaatacgatactctacttat-actttattactt 17203047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 201
Target Start/End: Complemental strand, 9916638 - 9916562
Alignment:
Q  126 gaaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aacgatttgatacacttgcctaa 201  Q
    ||||| || |||| |||||||| |||||||||||||| |||||||||| |||| || |||||| || ||||||||||    
T  9916638 gaaactacaatccatgtggatacgatactctacttattactttattacgtggtaaatgatttggtatacttgcctaa 9916562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 201
Target Start/End: Complemental strand, 9924550 - 9924474
Alignment:
Q  126 gaaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aacgatttgatacacttgcctaa 201  Q
    ||||| || |||| |||||||| |||||||||||||| |||||||||| |||| || |||||| || ||||||||||    
T  9924550 gaaactacaatccatgtggatacgatactctacttattactttattacgtggtaaatgatttggtatacttgcctaa 9924474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 99 - 201
Target Start/End: Complemental strand, 1872884 - 1872781
Alignment:
Q  99 aaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aacgatttgatacacttgc 197  Q
    ||||||||||||| ||| || ||| | |||||||| |    |||||||| |||||||||||||||| | |||||||| || |||||||||  ||||||||    
T  1872884 aaaataagtaacacgaattgtttgtatgaaacgacaacttatgtggatacgatactctacttatcattgtattacttagtgaacgatttgtcacacttgc 1872785  T
Q  198 ctaa 201  Q
    ||||    
T  1872784 ctaa 1872781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 127 - 201
Target Start/End: Complemental strand, 7397266 - 7397192
Alignment:
Q  127 aaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aacgatttgatacacttgcctaa 201  Q
    ||||||| |||| |||||||| ||||||||| ||| |||||||||||||||| |||| |||| ||||||| |||||    
T  7397266 aaacgacaatccatgtggatacgatactctagtta-cactttattacttggtaaacggtttggtacactttcctaa 7397192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 7492168 - 7492199
Alignment:
Q  1 ttttctgcaaccaaaaacaggtaacttgctct 32  Q
    ||||||||||||||||||||||||||||||||    
T  7492168 ttttctgcaaccaaaaacaggtaacttgctct 7492199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 135 - 198
Target Start/End: Original strand, 7748122 - 7748184
Alignment:
Q  135 atccctgtggatatgatactctacttatcactttattacttggtaacgatttgatacacttgcc 198  Q
    |||| |||||||| ||||||| ||||||||||||||| ||   |||||||||||||||||||||    
T  7748122 atccatgtggatacgatactc-acttatcactttatttctaaataacgatttgatacacttgcc 7748184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 135 - 178
Target Start/End: Complemental strand, 8877484 - 8877441
Alignment:
Q  135 atccctgtggatatgatactctacttatcactttattacttggt 178  Q
    |||| |||||||| ||||||||||||||||| ||||||||||||    
T  8877484 atccatgtggatacgatactctacttatcaccttattacttggt 8877441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 123 - 201
Target Start/End: Complemental strand, 9500519 - 9500440
Alignment:
Q  123 gacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aacgatttgatacacttgcctaa 201  Q
    |||||||| || |||| |||||||| ||||||||| | ||||| |||||||||||| || |||||  |||||||||||||    
T  9500519 gacgaaacaacaatccttgtggatacgatactctaatgatcacattattacttggtaaatgattttgtacacttgcctaa 9500440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 98 - 176
Target Start/End: Original strand, 16059020 - 16059099
Alignment:
Q  98 aaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctactta-tcactttattacttg 176  Q
    |||||||||||||   || || |||||||||| ||| |||| |||||||| ||||||||||||| | |||||||||||||    
T  16059020 aaaaataagtaactaaaattgtttggacgaaaggacaatccatgtggatacgatactctacttactaactttattacttg 16059099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 135 - 201
Target Start/End: Complemental strand, 16306757 - 16306690
Alignment:
Q  135 atccctgtggatatgatactctacttatcactttattacttggt-aacgatttgatacacttgcctaa 201  Q
    |||| ||| |||| |||||||||||||||||||||||||||| | || ||||| ||||||||| ||||    
T  16306757 atccttgtagatacgatactctacttatcactttattacttgttaaaggattttatacacttgtctaa 16306690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 135 - 197
Target Start/End: Complemental strand, 18661653 - 18661590
Alignment:
Q  135 atccctgtggatatgatactctacttatcactttattacttggt-aacgatttgatacacttgc 197  Q
    |||| ||||||||  ||||||||||||||||||||||  ||||| ||||||||| |||||||||    
T  18661653 atccttgtggatacaatactctacttatcactttattgtttggtaaacgatttggtacacttgc 18661590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 4819033 - 4818999
Alignment:
Q  1 ttttctgcaaccaaaaacaggtaacttgctctatt 35  Q
    ||||||||||||||||| |||||||||||||||||    
T  4819033 ttttctgcaaccaaaaataggtaacttgctctatt 4818999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 201
Target Start/End: Complemental strand, 7782599 - 7782557
Alignment:
Q  159 ttatcactttattacttggtaacgatttgatacacttgcctaa 201  Q
    |||||||||||||||| |||||||||||| |||||| ||||||    
T  7782599 ttatcactttattactgggtaacgatttggtacactcgcctaa 7782557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 100 - 201
Target Start/End: Complemental strand, 9245279 - 9245177
Alignment:
Q  100 aaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aacgatttgatacacttgcc 198  Q
    |||||||||||| ||| || ||  |||||| ||| |||| |||||||| |||||||| |||| || ||| ||||||||| ||||||| | |||| |||||    
T  9245279 aaataagtaacacgaattgtttaaacgaaatgacaatccatgtggatacgatactctgcttaccatttttttacttggtaaacgattaggtacagttgcc 9245180  T
Q  199 taa 201  Q
    |||    
T  9245179 taa 9245177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 197
Target Start/End: Original strand, 9866582 - 9866639
Alignment:
Q  140 tgtggatatgatactctacttatcactttattacttggt-aacgatttgatacacttgc 197  Q
    |||||||||||||||||||||| |||||||||| ||||| ||| ||||| |||||||||    
T  9866582 tgtggatatgatactctactta-cactttattatttggtaaacaatttggtacacttgc 9866639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 175
Target Start/End: Original strand, 22067248 - 22067302
Alignment:
Q  122 ggacgaaacgacgatccctgtggatatgatactctactta-tcactttattactt 175  Q
    |||||||| ||| |||||| |||||||||||||||||||| | ||||||||||||    
T  22067248 ggacgaaaggacaatccctatggatatgatactctacttactaactttattactt 22067302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 201
Target Start/End: Original strand, 26134789 - 26134850
Alignment:
Q  140 tgtggatatgatactctacttatcactttattacttggt-aacgatttgatacacttgcctaa 201  Q
    |||||||| ||||||||||||| || ||||||||||||| ||||||||| |||||||| ||||    
T  26134789 tgtggatacgatactctactta-cattttattacttggtaaacgatttggtacacttgtctaa 26134850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 120 - 201
Target Start/End: Complemental strand, 9130985 - 9130902
Alignment:
Q  120 ttggacgaaacgacgatccctgtggatatg--atactctacttatcactttattacttggtaa-cgatttgatacacttgcctaa 201  Q
    |||||||||||||  |||| |||||||||   ||||| |||||| |||||||||||||| ||| | |||||||||||||||||||    
T  9130985 ttggacgaaacgataatccatgtggatatacaatactatactta-cactttattacttgataaacaatttgatacacttgcctaa 9130902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 17153059 - 17153088
Alignment:
Q  1 ttttctgcaaccaaaaacaggtaacttgct 30  Q
    ||||||||||||||||||||||||||||||    
T  17153059 ttttctgcaaccaaaaacaggtaacttgct 17153088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 201
Target Start/End: Complemental strand, 12391257 - 12391181
Alignment:
Q  126 gaaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aacgatttgatacacttgcctaa 201  Q
    |||||||| || |||||| ||| || ||||| ||||||||||||||| ||| | ||| ||||| |||||||||||||    
T  12391257 gaaacgacaattcctgtgaatacgacactcttcttatcactttattatttgataaactatttggtacacttgcctaa 12391181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 172
Target Start/End: Complemental strand, 18466103 - 18466031
Alignment:
Q  100 aaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttatta 172  Q
    ||||||||||||  || || ||||  |||||||  |||||| |||||| | ||||||||||||||||||||||    
T  18466103 aaataagtaacacaaattgtttggctgaaacgagaatccctatggatacgttactctacttatcactttatta 18466031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 180
Target Start/End: Complemental strand, 18495471 - 18495391
Alignment:
Q  100 aaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggtaa 180  Q
    ||||||||||||  || || || ||||||||||| |||||  ||||||   |||| |||||||||||||||||||| ||||    
T  18495471 aaataagtaacacaaattgtttagacgaaacgacaatccccatggatacattactttacttatcactttattacttagtaa 18495391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 180
Target Start/End: Complemental strand, 21227233 - 21227197
Alignment:
Q  144 gatatgatactctacttatcactttattacttggtaa 180  Q
    |||| ||||||||||||||||||||||||||| ||||    
T  21227233 gatacgatactctacttatcactttattactttgtaa 21227197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 201
Target Start/End: Complemental strand, 23093357 - 23093306
Alignment:
Q  150 atactctacttatcactttattacttggtaa-cgatttgatacacttgcctaa 201  Q
    |||||||||||| ||||||||||||| |||| ||||||| |||||||||||||    
T  23093357 atactctactta-cactttattacttagtaaacgatttggtacacttgcctaa 23093306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 95; Significance: 1e-46; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 60 - 201
Target Start/End: Original strand, 20174596 - 20174738
Alignment:
Q  60 tctctaacccttaactcttttattttatatcgtcaactaaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctact 159  Q
    |||||||||||||||| |||||||||||||| |||||| ||||||||||||||||| || |||||||||||||| |||| |||||| |||||||||||||    
T  20174596 tctctaacccttaactattttattttatatcatcaacttaaaataagtaacatgaattgtttggacgaaacgacaatccatgtggaaatgatactctact 20174695  T
Q  160 tatcactttattacttggt-aacgatttgatacacttgcctaa 201  Q
    ||||||||||||||||||| ||||||||| ||||||| |||||    
T  20174696 tatcactttattacttggtaaacgatttggtacactttcctaa 20174738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 87; E-Value: 6e-42
Query Start/End: Original strand, 60 - 201
Target Start/End: Complemental strand, 32085601 - 32085459
Alignment:
Q  60 tctctaacccttaactcttttattttatatcgtcaactaaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctact 159  Q
    |||||||| ||||||||||||||||||||||||||||| ||||||||||||| ||  || || ||||||||||| |||| ||||||||||||||||||||    
T  32085601 tctctaactcttaactcttttattttatatcgtcaacttaaaataagtaacacgagctgtttagacgaaacgacaatccatgtggatatgatactctact 32085502  T
Q  160 tatcactttattacttggt-aacgatttgatacacttgcctaa 201  Q
    ||||||||||||||||||| ||| ||||| ||||||| |||||    
T  32085501 tatcactttattacttggtaaacaatttggtacacttacctaa 32085459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 60 - 201
Target Start/End: Complemental strand, 25618692 - 25618553
Alignment:
Q  60 tctctaacccttaactcttttattttatatcgtcaactaaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctact 159  Q
    ||||||||  || |||||||||||  |||||||||||||||||||||| ||  ||| || || ||||||||||| |||| ||||||||||||||||||||    
T  25618692 tctctaacttttcactcttttatt--atatcgtcaactaaaaataagttacgcgaattgtttagacgaaacgacaatccatgtggatatgatactctact 25618595  T
Q  160 tatcactttattacttggtaacgatttgatacacttgcctaa 201  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  25618594 tatcactttattacttggtaacgatttgatacgcttgcctaa 25618553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 98 - 198
Target Start/End: Original strand, 17743475 - 17743576
Alignment:
Q  98 aaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aacgatttgatacacttg 196  Q
    |||||||||||||| ||| || |||||||||||||  |||| |||||||| |||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  17743475 aaaaataagtaacacgaattgtttggacgaaacgataatccatgtggatacgatactctacttatcactttattacttggtaaacgatttggtacacttg 17743574  T
Q  197 cc 198  Q
    ||    
T  17743575 cc 17743576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 94 - 201
Target Start/End: Original strand, 29719226 - 29719334
Alignment:
Q  94 aactaaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aacgatttgataca 192  Q
    |||||||||||||||||  ||| || ||| |||||||||| |||| |||||||| |||| ||||||||||||||||||||||||| ||||||||| ||||    
T  29719226 aactaaaaataagtaacgcgaattgtttgaacgaaacgacaatccttgtggatacgataatctacttatcactttattacttggtaaacgatttggtaca 29719325  T
Q  193 cttgcctaa 201  Q
    |||||||||    
T  29719326 cttgcctaa 29719334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 97 - 180
Target Start/End: Complemental strand, 25196111 - 25196028
Alignment:
Q  97 taaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggtaa 180  Q
    |||||||||||||| |||| || |||||||||| ||| | ||||||||||||||||||||||||||||||||||||||||||||    
T  25196111 taaaaataagtaacgtgaattgtttggacgaaaggacaacccctgtggatatgatactctacttatcactttattacttggtaa 25196028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 120 - 201
Target Start/End: Complemental strand, 15339316 - 15339234
Alignment:
Q  120 ttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aacgatttgatacacttgcctaa 201  Q
    |||||||||||||| |||| ||||||||||||||||||||| ||||||||||||||||| || |||||| |||||||||||||    
T  15339316 ttggacgaaacgacaatccatgtggatatgatactctacttttcactttattacttggtaaatgatttggtacacttgcctaa 15339234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 98 - 198
Target Start/End: Complemental strand, 28925621 - 28925521
Alignment:
Q  98 aaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggtaacgatttgatacacttgc 197  Q
    |||||||| ||||||||| || |||||||||||||| ||||  |||||||  |  ||||||||||||||||||||||||||||||||||  |||||||||    
T  28925621 aaaaataaataacatgaattgtttggacgaaacgacaatccacgtggatacaacgctctacttatcactttattacttggtaacgatttagtacacttgc 28925522  T
Q  198 c 198  Q
    |    
T  28925521 c 28925521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 98 - 176
Target Start/End: Complemental strand, 25535374 - 25535296
Alignment:
Q  98 aaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttg 176  Q
    |||||||||||||| ||| || | |||||||| ||| ||||||||||||| ||||||||||||||||||||||||||||    
T  25535374 aaaaataagtaacaagaattgttcggacgaaaggacaatccctgtggatacgatactctacttatcactttattacttg 25535296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 98 - 180
Target Start/End: Original strand, 45621880 - 45621962
Alignment:
Q  98 aaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggtaa 180  Q
    |||||||||||||| ||| || |||||||||||||| |||| ||| |||| |||||||||||| |||||||||||||||||||    
T  45621880 aaaaataagtaacacgaattgtttggacgaaacgacaatccttgtagatacgatactctacttctcactttattacttggtaa 45621962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 98 - 198
Target Start/End: Original strand, 27909118 - 27909219
Alignment:
Q  98 aaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aacgatttgatacacttg 196  Q
    ||||||||||||| |||| || ||||| ||||| |  | || |||||||| |||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  27909118 aaaaataagtaacgtgaattgtttggatgaaacaataacccatgtggatacgatactctacttatcactttattacttggtaaacgatttggtacacttg 27909217  T
Q  197 cc 198  Q
    ||    
T  27909218 cc 27909219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 62 - 201
Target Start/End: Original strand, 25885423 - 25885562
Alignment:
Q  62 tctaacccttaactcttttattttatatcgtcaactaaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctactta 161  Q
    ||||||||||||||||||||||||||||||||     |||||||||||||  || || |||||||||||||| || | |||||||| |||||| | ||||    
T  25885423 tctaacccttaactcttttattttatatcgtcggaataaaataagtaacacaaattgtttggacgaaacgacaattcttgtggatacgatactattctta 25885522  T
Q  162 tcactttattacttggt-aacgatttgatacacttgcctaa 201  Q
    |||| ||||||||| || ||||||||| |||| | ||||||    
T  25885523 tcac-ttattactttgtaaacgatttggtacaatcgcctaa 25885562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 60 - 196
Target Start/End: Original strand, 11382715 - 11382851
Alignment:
Q  60 tctctaacccttaactcttttattttatatcgtcaa-ctaaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctac 158  Q
    ||||||||  ||||||||||||| ||||  |||||| |||||||||||||||  ||| |  ||||| ||||  || || | |||||||||||||||||||    
T  11382715 tctctaacttttaactcttttatcttat--cgtcaaactaaaaataagtaacgcgaattatttggatgaaaatacaattcatgtggatatgatactctac 11382812  T
Q  159 ttatcactttattacttggt-aacgatttgatacacttg 196  Q
    ||||||||||||||  |||| ||||||||||||||||||    
T  11382813 ttatcactttattatctggtaaacgatttgatacacttg 11382851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 100 - 201
Target Start/End: Complemental strand, 45553228 - 45553126
Alignment:
Q  100 aaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aacgatttgatacacttgcc 198  Q
    |||||| ||||| ||| ||||||||| ||||||| ||||||||  ||| |||| | ||||||||||||||||||||| | ||||||||| ||||||||||    
T  45553228 aaataattaacacgaattgcttggacaaaacgacaatccctgtaaatacgatattttacttatcactttattacttgataaacgatttggtacacttgcc 45553129  T
Q  199 taa 201  Q
    |||    
T  45553128 taa 45553126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 89 - 201
Target Start/End: Original strand, 9774325 - 9774435
Alignment:
Q  89 tcgtcaactaaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggtaacgatttga 188  Q
    |||| |||||||||||||||||   || || |||||| ||||||| |||| |||||||| ||||||||||  ||||||||||| |||||||||| || ||    
T  9774325 tcgttaactaaaaataagtaacgcaaattggttggacaaaacgacaatccatgtggatacgatactctac--atcactttattccttggtaacggttcga 9774422  T
Q  189 tacacttgcctaa 201  Q
    |||| ||||||||    
T  9774423 tacatttgcctaa 9774435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 60 - 201
Target Start/End: Original strand, 31804862 - 31805003
Alignment:
Q  60 tctctaacccttaactcttttattttatatcgtcaact---aaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactct 156  Q
    |||||||||||||  |||||||||  ||||||||||||   ||||||||||||||   | || |||||||||||| | ||| |||||||||  |||||||    
T  31804862 tctctaaccctta--tcttttatt--atatcgtcaacttacaaaaataagtaacacagattggttggacgaaacggcaatctctgtggatacaatactct 31804957  T
Q  157 acttatcactttattacttggt-aacgatttgatacacttgcctaa 201  Q
    |||||||||||||||| ||||| ||| ||||| ||||||| |||||    
T  31804958 acttatcactttattatttggtaaacaatttggtacactttcctaa 31805003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 126 - 201
Target Start/End: Original strand, 8503097 - 8503173
Alignment:
Q  126 gaaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aacgatttgatacacttgcctaa 201  Q
    |||| ||| |||| |||||||||||| ||||||||||||| |||||||||||| ||||||||| |||||||||||||    
T  8503097 gaaatgacaatccatgtggatatgatcctctacttatcacgttattacttggtaaacgatttggtacacttgcctaa 8503173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 126 - 201
Target Start/End: Original strand, 25888247 - 25888323
Alignment:
Q  126 gaaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aacgatttgatacacttgcctaa 201  Q
    |||||||| |||| |||||||| |||||| ||||||||||||||||||||||| ||| ||||| |||||||||||||    
T  25888247 gaaacgacaatccatgtggatacgatactgtacttatcactttattacttggtaaacaatttggtacacttgcctaa 25888323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 84 - 180
Target Start/End: Complemental strand, 17349472 - 17349375
Alignment:
Q  84 ttatatcgtcaactaa--aaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggtaa 180  Q
    |||||||||||||| |  |||||||||||  ||| || |||||||||||||| |||  |||||||| ||||||||||||| ||||||||||||||||||    
T  17349472 ttatatcgtcaacttacaaaataagtaacgcgaaatgtttggacgaaacgacaatctttgtggatacgatactctactta-cactttattacttggtaa 17349375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 82 - 198
Target Start/End: Original strand, 17635755 - 17635875
Alignment:
Q  82 ttttatatcgtcaact---aaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt 178  Q
    ||||| ||||||||||   ||||||||||||| |||  |  || ||||||||||| ||| ||||||||||||| |||||||| || ||||||||||||||    
T  17635755 ttttacatcgtcaacttacaaaaataagtaacgtgagtttttttgacgaaacgacaatctctgtggatatgattctctacttttctctttattacttggt 17635854  T
Q  179 -aacgatttgatacacttgcc 198  Q
     ||||||||| |||| |||||    
T  17635855 aaacgatttgctacatttgcc 17635875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 98 - 176
Target Start/End: Original strand, 24090925 - 24091003
Alignment:
Q  98 aaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttg 176  Q
    |||||||||||||| ||| || |||||||||| ||| |||| |||||||| |||| |||| ||||||||||||||||||    
T  24090925 aaaaataagtaacaagaattgtttggacgaaaggacaatccatgtggatacgatattctatttatcactttattacttg 24091003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 122 - 176
Target Start/End: Complemental strand, 25530523 - 25530469
Alignment:
Q  122 ggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttg 176  Q
    |||||||| ||| ||||||||||||| ||||||||||||||||||||||||||||    
T  25530523 ggacgaaaggacaatccctgtggatacgatactctacttatcactttattacttg 25530469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 98 - 201
Target Start/End: Original strand, 12953293 - 12953397
Alignment:
Q  98 aaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aacgatttgatacacttg 196  Q
    |||||||||||||  ||| || || ||||||||||| |||| |||||| |  ||||||||||||| ||||||||||||| | || |||||| ||||||||    
T  12953293 aaaaataagtaacgcgaattgttttgacgaaacgacaatccatgtggacacaatactctacttattactttattacttgataaatgatttggtacacttg 12953392  T
Q  197 cctaa 201  Q
    |||||    
T  12953393 cctaa 12953397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 99 - 175
Target Start/End: Complemental strand, 27418465 - 27418389
Alignment:
Q  99 aaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattactt 175  Q
    ||||||||||||| ||| || ||||  |||| ||  |||| ||||||||||||||||||||||||||||||||||||    
T  27418465 aaaataagtaacacgaattgtttggttgaaatgataatccatgtggatatgatactctacttatcactttattactt 27418389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 60 - 160
Target Start/End: Original strand, 28606139 - 28606239
Alignment:
Q  60 tctctaacccttaactcttttattttatatcgtcaactaaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctact 159  Q
    ||||||||||||  |||||||||| ||||||||||||| ||||||||||||   |  || || ||||||||||| ||||  ||||||| |||||||||||    
T  28606139 tctctaacccttgtctcttttattatatatcgtcaacttaaaataagtaacgccagctgtttagacgaaacgacaatcctagtggatacgatactctact 28606238  T
Q  160 t 160  Q
    |    
T  28606239 t 28606239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 128 - 201
Target Start/End: Original strand, 8447079 - 8447152
Alignment:
Q  128 aacgacgatccctgtggatatgatactctacttatcactttattacttggtaa-cgatttgatacacttgcctaa 201  Q
    |||||| |||| |||||||| |||| ||||||||| ||||||||||||||||| ||||||| |||||||||||||    
T  8447079 aacgacaatccatgtggatacgataatctacttat-actttattacttggtaaacgatttggtacacttgcctaa 8447152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 122 - 180
Target Start/End: Complemental strand, 30411754 - 30411696
Alignment:
Q  122 ggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggtaa 180  Q
    |||||||| ||| |||||||| |||| ||||||||||||||||||||||||| ||||||    
T  30411754 ggacgaaatgacaatccctgttgatacgatactctacttatcactttattacatggtaa 30411696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 148 - 201
Target Start/End: Original strand, 20173347 - 20173400
Alignment:
Q  148 tgatactctacttatcactttattacttggtaacgatttgatacacttgcctaa 201  Q
    ||||||||| ||||||||||||| |||||||||||||||| ||||||| |||||    
T  20173347 tgatactctgcttatcactttataacttggtaacgatttggtacactttcctaa 20173400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 123 - 198
Target Start/End: Original strand, 17675654 - 17675730
Alignment:
Q  123 gacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aacgatttgatacacttgcc 198  Q
    ||||||||||| ||| |||| |||||||| |||||||| || |||||||||||||| ||||||||| |||| |||||    
T  17675654 gacgaaacgacaatctctgttgatatgattctctacttttctctttattacttggtaaacgatttgctacatttgcc 17675730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 94 - 201
Target Start/End: Original strand, 19200130 - 19200237
Alignment:
Q  94 aactaaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aacgatttgataca 192  Q
    |||| |||||||||||  |||  || ||||| |||||||| |||| |||||||| ||||||| ||||||||| |||||| ||||| || |||||| ||||    
T  19200130 aacttaaaataagtaatgtgagttgtttggatgaaacgacaatccttgtggatacgatactc-acttatcacattattatttggtaaaagatttggtaca 19200228  T
Q  193 cttgcctaa 201  Q
    |||||||||    
T  19200229 cttgcctaa 19200237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 201
Target Start/End: Complemental strand, 13776449 - 13776335
Alignment:
Q  87 tatcgtcaactaaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aacgatt 185  Q
    ||||||||||| |||||||||||| ||   || |||||||||| ||| |||  |||||||| ||||||| |||||||||||||||| ||  | |||||||    
T  13776449 tatcgtcaacttaaaataagtaacgtgggttgtttggacgaaatgacaatctatgtggatacgatactc-acttatcactttattatttaataaacgatt 13776351  T
Q  186 tgatacacttgcctaa 201  Q
    || |||||||| ||||    
T  13776350 tgctacacttgtctaa 13776335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 60 - 110
Target Start/End: Complemental strand, 29027634 - 29027584
Alignment:
Q  60 tctctaacccttaactcttttattttatatcgtcaactaaaaataagtaac 110  Q
    ||||||||||||| ||||||||||| |||||| ||||| ||||||||||||    
T  29027634 tctctaacccttatctcttttatttaatatcggcaacttaaaataagtaac 29027584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 201
Target Start/End: Original strand, 26603349 - 26603453
Alignment:
Q  98 aaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aacgatttgatacacttg 196  Q
    ||||||||||||| | || || ||| |||||| ||| |||| | |  ||| |||||||||||||||||||| ||||||| | ||| ||||| ||||||||    
T  26603349 aaaaataagtaacgtcaattgtttgcacgaaaagacaatccatataaatacgatactctacttatcacttttttacttgataaacaatttggtacacttg 26603448  T
Q  197 cctaa 201  Q
    |||||    
T  26603449 cctaa 26603453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 180
Target Start/End: Original strand, 28770444 - 28770524
Alignment:
Q  100 aaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggtaa 180  Q
    ||||||||| | |||| || ||||| |||| |||  | ||| |||||| |||||||||||||||||||||||| |||||||    
T  28770444 aaataagtagcgtgaattgtttggatgaaaagacattacctatggatacgatactctacttatcactttattatttggtaa 28770524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 100 - 201
Target Start/End: Complemental strand, 5777314 - 5777213
Alignment:
Q  100 aaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aacgatttgatacacttgcc 198  Q
    ||||||||||| |||| || |||||||||||||| |||| | | |||  |||||| ||||||  ||||||||| ||| | |||||| |||||||||||||    
T  5777314 aaataagtaacgtgaattgtttggacgaaacgacaatccatatagattcgatactttactta-aactttattatttgataaacgatatgatacacttgcc 5777216  T
Q  199 taa 201  Q
    |||    
T  5777215 taa 5777213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 201
Target Start/End: Original strand, 12557736 - 12557811
Alignment:
Q  126 gaaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aacgatttgatacacttgcctaa 201  Q
    |||||| | |||| |||||||  |||| |||||||| |||||||||||||||| || |||||| |||||||||||||    
T  12557736 gaaacggcaatccttgtggattcgatattctactta-cactttattacttggtaaaagatttggtacacttgcctaa 12557811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 25887809 - 25887853
Alignment:
Q  1 ttttctgcaaccaaaaacaggtaacttgctctatttcaaatagat 45  Q
    ||||||||||||||||| |||||||||||||| || |||| ||||    
T  25887809 ttttctgcaaccaaaaataggtaacttgctctgttgcaaacagat 25887853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0622 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0622
Description:

Target: scaffold0622; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 60 - 201
Target Start/End: Complemental strand, 867 - 724
Alignment:
Q  60 tctctaacccttaactcttttattttatatcgtcaactaaaaataagtaacat-gaagtgcttggacgaaacgacgatccctgtggatatgatactctac 158  Q
    ||||||||||||||||||||||||||||||| |||||| |||||||||||| | | | || |||||||||||||| |||| ||| ||||  |||||||||    
T  867 tctctaacccttaactcttttattttatatcttcaacttaaaataagtaacgtcggattgtttggacgaaacgacaatccttgttgatacaatactctac 768  T
Q  159 ttatcactttattacttggt-aacgatttgatacacttgcctaa 201  Q
    |||||||||||||||||||| ||||||||| |||||||||||||    
T  767 ttatcactttattacttggtaaacgatttggtacacttgcctaa 724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 78; Significance: 2e-36; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 84 - 201
Target Start/End: Original strand, 25550487 - 25550607
Alignment:
Q  84 ttatatcgtcaactaa--aaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aa 180  Q
    |||||||||||||| |  |||||||||||| ||| || |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||    
T  25550487 ttatatcgtcaacttacaaaataagtaacaagaattgtttggacgaaatgacaatccctgtggatatgatactctacttatcactttattacttggtaaa 25550586  T
Q  181 cgatttgatacacttgcctaa 201  Q
    |||||||||||||||||||||    
T  25550587 cgatttgatacacttgcctaa 25550607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 65 - 201
Target Start/End: Original strand, 18208215 - 18208351
Alignment:
Q  65 aacccttaactcttttattttatatcgtcaactaaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatca 164  Q
    |||||||||||||||||||||||||| ||||   ||||||||||||||||| || |||||||||| ||| |||| |||||||| ||||||||||||| ||    
T  18208215 aacccttaactcttttattttatatcatcaaaacaaaataagtaacatgaattgtttggacgaaaggacaatccatgtggatacgatactctactta-ca 18208313  T
Q  165 ctttattacttggt-aacgatttgatacacttgcctaa 201  Q
    ||||||||||| || ||||||||| |||||||||||||    
T  18208314 ctttattactttgtaaacgatttggtacacttgcctaa 18208351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 62 - 201
Target Start/End: Original strand, 24266917 - 24267057
Alignment:
Q  62 tctaacccttaactcttttatt-ttatatcgtcaactaaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctactt 160  Q
    |||||||||||||||||||||| ||||||||||||   ||||||||||||| ||| || |||||| ||| ||  |||| |||||||| ||||||||||||    
T  24266917 tctaacccttaactcttttattattatatcgtcaaaacaaaataagtaacacgaattgtttggacaaaatgataatccttgtggatacgatactctactt 24267016  T
Q  161 atcactttattacttggt-aacgatttgatacacttgcctaa 201  Q
    | |||||||||||||||| ||||||||| |||||||||||||    
T  24267017 a-cactttattacttggtaaacgatttggtacacttgcctaa 24267057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 62 - 201
Target Start/End: Original strand, 24343548 - 24343688
Alignment:
Q  62 tctaacccttaactcttttatt-ttatatcgtcaactaaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctactt 160  Q
    |||||||||||||||||||||| ||||||||||||   ||||||||||||| ||| || |||||| ||| ||  |||| |||||||| ||||||||||||    
T  24343548 tctaacccttaactcttttattattatatcgtcaaaacaaaataagtaacacgaattgtttggacaaaatgataatccttgtggatacgatactctactt 24343647  T
Q  161 atcactttattacttggt-aacgatttgatacacttgcctaa 201  Q
    | |||||||||||||||| ||||||||| |||||||||||||    
T  24343648 a-cactttattacttggtaaacgatttggtacacttgcctaa 24343688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 65 - 201
Target Start/End: Complemental strand, 18937879 - 18937744
Alignment:
Q  65 aacccttaactcttttattttatatcgtcaactaaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatca 164  Q
    ||||||||||||||| |||||||||| | |||| |||||||||||| |||| || ||||||||||| || |||||| || ||| |||||| |||||||||    
T  18937879 aacccttaactcttt-attttatatcattaacttaaaataagtaacgtgaattgtttggacgaaacaacaatccctctgaatacgatact-tacttatca 18937782  T
Q  165 ctttattacttggt-aacgatttgatacacttgcctaa 201  Q
    |||||||||||  | ||||||||| |||||||||||||    
T  18937781 ctttattacttaataaacgatttggtacacttgcctaa 18937744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 60 - 180
Target Start/End: Complemental strand, 34487776 - 34487656
Alignment:
Q  60 tctctaacccttaactcttttatt-ttatatcgtcaactaaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctac 158  Q
    ||||||||||||| || ||||||| ||||||||||||   ||||||||||||  ||| || || ||||||||||| |||| ||||||||||||| |||||    
T  34487776 tctctaacccttatcttttttattattatatcgtcaaaacaaaataagtaacgcgaattgtttagacgaaacgacaatccatgtggatatgatattctac 34487677  T
Q  159 ttatcactttattacttggtaa 180  Q
    ||| ||||||||||||||||||    
T  34487676 tta-cactttattacttggtaa 34487656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 60 - 180
Target Start/End: Original strand, 19283816 - 19283936
Alignment:
Q  60 tctctaacccttaactcttttattttatatcgtcaactaaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctact 159  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||||| |    || || ||||||||||||   || | ||||||||  ||||||||||    
T  19283816 tctctaacccttaactcttttactttatatcgtcaacttaaaataagttaagcaaattgtttggacgaaacgttaattcttgtggatacaatactctact 19283915  T
Q  160 tatcactttattacttggtaa 180  Q
    ||||||||||||| |||||||    
T  19283916 tatcactttattatttggtaa 19283936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 120 - 198
Target Start/End: Original strand, 15375903 - 15375982
Alignment:
Q  120 ttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aacgatttgatacacttgcc 198  Q
    |||||||||||||| ||||||||||||| |||||||||||||||| ||||||| ||||| ||||||||| ||||||||||    
T  15375903 ttggacgaaacgacaatccctgtggataggatactctacttatcattttattatttggtaaacgatttggtacacttgcc 15375982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 60 - 201
Target Start/End: Complemental strand, 15690914 - 15690774
Alignment:
Q  60 tctctaaccctt-aactcttttattttatatcgtcaactaaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctac 158  Q
    |||||||||||| ||||||||||||| || | ||||||||||||||||||||  ||| || |||||||||||||| || |  ||||||| ||||||||||    
T  15690914 tctctaaccctttaactcttttattt-attt-gtcaactaaaaataagtaacgagaattggttggacgaaacgacaattctcgtggatacgatactctac 15690817  T
Q  159 ttatcactttattacttggt-aacgatttgatacacttgcctaa 201  Q
    |||||||||||||| ||||| ||||||||| || |||| |||||    
T  15690816 ttatcactttatta-ttggtaaacgatttggtaaacttacctaa 15690774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 60 - 201
Target Start/End: Complemental strand, 22755659 - 22755517
Alignment:
Q  60 tctctaacccttaactcttttattttatatcgtcaactaaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctact 159  Q
    ||||||||||||||||||||||||||||||||| ||   ||||||| |||    || || ||||| |||||||| |||| | |||||| |||||||||||    
T  22755659 tctctaacccttaactcttttattttatatcgtaaaactaaaataaataatgccaattgtttggaagaaacgacaatccttatggatacgatactctact 22755560  T
Q  160 tatcactttattacttggt-aacgatttgatacacttgcctaa 201  Q
    |||| ||| |||||||||| ||||||| | |||||||| ||||    
T  22755559 tatctcttcattacttggtaaacgattcggtacacttgtctaa 22755517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 98 - 198
Target Start/End: Original strand, 19004225 - 19004326
Alignment:
Q  98 aaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aacgatttgatacacttg 196  Q
    ||||||||||||| |||| || |||||| ||| ||| |||| |||||||| ||||||| |||||||||||||||||||||| ||||||||  ||||||||    
T  19004225 aaaaataagtaacgtgaattgtttggacaaaatgacaatccatgtggatacgatactccacttatcactttattacttggtaaacgatttagtacacttg 19004324  T
Q  197 cc 198  Q
    ||    
T  19004325 cc 19004326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 98 - 178
Target Start/End: Original strand, 23388837 - 23388917
Alignment:
Q  98 aaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt 178  Q
    |||||||||||||| ||| || | |||||||| ||| |||| |||||||| ||||||||||||||||||||||||||||||    
T  23388837 aaaaataagtaacaagaattgttcggacgaaaggacaatccatgtggatacgatactctacttatcactttattacttggt 23388917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 101 - 195
Target Start/End: Original strand, 19086181 - 19086276
Alignment:
Q  101 aataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aacgatttgatacactt 195  Q
    ||||||||||||||| || || ||| |||| || || | ||||||||| ||||||||||||||||||||||||||||| ||||||||| |||||||    
T  19086181 aataagtaacatgaattgatttgacaaaacaacaattcatgtggatataatactctacttatcactttattacttggtaaacgatttggtacactt 19086276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 98 - 196
Target Start/End: Original strand, 24245543 - 24245642
Alignment:
Q  98 aaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggtaa-cgatttgatacacttg 196  Q
    |||||||||||||  ||  || |||||||||||||| |||| |||||||| ||||||||||||||||||||||||| |||||| |||||||  |||||||    
T  24245543 aaaaataagtaacgcgagttgtttggacgaaacgacaatccttgtggatacgatactctacttatcactttattacatggtaagcgatttgtgacacttg 24245642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 60 - 201
Target Start/End: Original strand, 25402299 - 25402440
Alignment:
Q  60 tctctaacccttaactcttttattttatatcgtcaa-ctaaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctac 158  Q
    |||||||||||| |||||||||||||||   ||||| || ||||||||||||  |||    | |||||||||||| |||||||||||||  |||||||||    
T  25402299 tctctaacccttcactcttttattttatt--gtcaaacttaaaataagtaacgcgaatcattaggacgaaacgacaatccctgtggatacaatactctac 25402396  T
Q  159 ttatcactttattacttgg-taacgatttgatacacttgcctaa 201  Q
    |||||||||  ||||||||  ||| ||||| |||||||||||||    
T  25402397 ttatcacttccttacttggcaaacaatttggtacacttgcctaa 25402440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 123 - 201
Target Start/End: Complemental strand, 15470011 - 15469932
Alignment:
Q  123 gacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aacgatttgatacacttgcctaa 201  Q
    ||||||||||| || | |||||||| ||||||| || ||||||||||||||||||| ||||||||| |||||||||||||    
T  15470011 gacgaaacgacaattcatgtggatacgatactcgacctatcactttattacttggtaaacgatttggtacacttgcctaa 15469932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 99 - 201
Target Start/End: Original strand, 17171553 - 17171656
Alignment:
Q  99 aaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aacgatttgatacacttgc 197  Q
    ||||||| ||||  ||| ||||| ||||||||||| |||| |||||||| ||| |||||||||||||||||||||||| | || |||||| ||||||| |    
T  17171553 aaaataattaacgcgaattgcttagacgaaacgacaatccatgtggatacgatgctctacttatcactttattacttgataaaagatttggtacacttac 17171652  T
Q  198 ctaa 201  Q
    ||||    
T  17171653 ctaa 17171656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 97 - 180
Target Start/End: Complemental strand, 24140543 - 24140460
Alignment:
Q  97 taaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggtaa 180  Q
    |||||||| |||||  ||| || |||||||||| ||| ||||| |||||||  |||||||||||||||||||||||||||||||    
T  24140543 taaaaatatgtaacgcgaattgtttggacgaaaggacaatcccagtggatacaatactctacttatcactttattacttggtaa 24140460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 81 - 180
Target Start/End: Original strand, 20315408 - 20315511
Alignment:
Q  81 attttatatcgtcaact----aaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttg 176  Q
    |||||||||||||||||    |||||||||| ||  ||| || |||||||||| ||  |||| |||||||| ||||||||||||||||| ||||||||||    
T  20315408 attttatatcgtcaacttaataaaaataagttacgcgaattgtttggacgaaaggataatccatgtggatacgatactctacttatcacattattacttg 20315507  T
Q  177 gtaa 180  Q
    ||||    
T  20315508 gtaa 20315511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 100 - 201
Target Start/End: Original strand, 24852173 - 24852275
Alignment:
Q  100 aaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggtaa-cgatttgatacacttgcc 198  Q
    ||||||||||| |||| || || |||||||| || |||| |||||||| |||||| ||||||||| ||||||||||||||| ||||||  || |||||||    
T  24852173 aaataagtaacgtgaattgtttagacgaaacaacaatccatgtggatacgatactatacttatcattttattacttggtaatcgatttagtagacttgcc 24852272  T
Q  199 taa 201  Q
    |||    
T  24852273 taa 24852275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 100 - 180
Target Start/End: Complemental strand, 17185561 - 17185481
Alignment:
Q  100 aaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggtaa 180  Q
    ||||| ||||| |||| || ||||  |||||||| |||||||| |||| |||||||||||||||||||||||| |||||||    
T  17185561 aaatacgtaacgtgaattgtttggttgaaacgacaatccctgtagatacgatactctacttatcactttattatttggtaa 17185481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 97 - 196
Target Start/End: Complemental strand, 17431984 - 17431884
Alignment:
Q  97 taaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aacgatttgatacactt 195  Q
    |||||||||||| | |||  || ||||| |||||||| ||| ||||||||| ||||||||||||  |||||||||||||||| ||||||||  |||||||    
T  17431984 taaaaataagtagcgtgagttgtttggatgaaacgacaatctctgtggatacgatactctactttccactttattacttggtaaacgatttagtacactt 17431885  T
Q  196 g 196  Q
    |    
T  17431884 g 17431884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 120 - 198
Target Start/End: Complemental strand, 34128714 - 34128636
Alignment:
Q  120 ttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aacgatttgatacacttgcc 198  Q
    |||||||||| ||| || |||||||||| |||| ||||||||||||||||||||||||| ||||| ||| ||||||||||    
T  34128714 ttggacgaaaggacaattcctgtggatacgatattctacttatcactttattacttggtcaacga-ttggtacacttgcc 34128636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 120 - 201
Target Start/End: Original strand, 24167605 - 24167687
Alignment:
Q  120 ttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aacgatttgatacacttgcctaa 201  Q
    ||||| |||||||| |||| |||  |||||||||||||||||  ||||||||||||||| |||||||| |||||||| |||||    
T  24167605 ttggaagaaacgacaatccatgtatatatgatactctacttactactttattacttggtaaacgatttaatacacttacctaa 24167687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 98 - 161
Target Start/End: Original strand, 20549703 - 20549766
Alignment:
Q  98 aaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctactta 161  Q
    |||||||||||||| ||| || | |||||||| ||| ||||||||||||| |||||||||||||    
T  20549703 aaaaataagtaacaagaattgttcggacgaaaggacaatccctgtggatacgatactctactta 20549766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 150 - 201
Target Start/End: Original strand, 23014660 - 23014711
Alignment:
Q  150 atactctacttatcactttattacttggtaacgatttgatacacttgcctaa 201  Q
    ||||||||||||||||||||||| ||| |||  |||||||||||||||||||    
T  23014660 atactctacttatcactttattatttgataatcatttgatacacttgcctaa 23014711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 97 - 180
Target Start/End: Complemental strand, 39434563 - 39434480
Alignment:
Q  97 taaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggtaa 180  Q
    ||||||||||||||  ||| || |||||| ||| ||| |||| |||||||| |||  ||||||||||| |||||||||||||||    
T  39434563 taaaaataagtaacgcgaattgtttggacaaaaggacaatccatgtggatacgattttctacttatcaatttattacttggtaa 39434480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 98 - 176
Target Start/End: Original strand, 17315099 - 17315177
Alignment:
Q  98 aaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttg 176  Q
    |||||||||||||  ||| || | ||| |||| ||| |||| |||||||| |||||| |||||||||||||||||||||    
T  17315099 aaaaataagtaactagaattgttcggaagaaaggacaatccatgtggatacgatactttacttatcactttattacttg 17315177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 98 - 176
Target Start/End: Complemental strand, 20858785 - 20858707
Alignment:
Q  98 aaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttg 176  Q
    |||||||||||||| ||| || | |||| ||| ||| ||| | ||||||| |||||||||||||||| |||||||||||    
T  20858785 aaaaataagtaacaagaattgttcggacaaaaggacaatctccgtggatacgatactctacttatcattttattacttg 20858707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 97 - 201
Target Start/End: Original strand, 26110460 - 26110564
Alignment:
Q  97 taaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aacgatttgatacactt 195  Q
    |||||||| ||||||  || || ||||| ||||| |  |||||||||||||| |||||||||||| || ||||||||||| | ||||||| | |||||||    
T  26110460 taaaaatatgtaacacaaattgattggatgaaacaaaaatccctgtggatattatactctactta-cattttattacttgataaacgattcggtacactt 26110558  T
Q  196 gcctaa 201  Q
    ||||||    
T  26110559 gcctaa 26110564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 36175211 - 36175135
Alignment:
Q  120 ttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aacgatttgatacacttg 196  Q
    |||||||||||||| |||| | |||||| ||||||||||  | |||||||||||||||| ||||||||| ||||||||    
T  36175211 ttggacgaaacgacaatccttatggatacgatactctac-aaacactttattacttggtaaacgatttggtacacttg 36175135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 115
Target Start/End: Original strand, 24662140 - 24662192
Alignment:
Q  63 ctaacccttaactcttttattttatatcgtcaactaaaaataagtaacatgaa 115  Q
    |||||||||||||||||||||||||||||| ||   |||||||||||| ||||    
T  24662140 ctaacccttaactcttttattttatatcgttaaactaaaataagtaacgtgaa 24662192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 98 - 176
Target Start/End: Original strand, 20564079 - 20564158
Alignment:
Q  98 aaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctactta-tcactttattacttg 176  Q
    |||||||||||||  |||| | ||||||||||  || |||| |||||||| ||||||||||||| | |||||||||||||    
T  20564079 aaaaataagtaactagaagcgtttggacgaaagaacaatccatgtggatacgatactctacttactaactttattacttg 20564158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 135 - 201
Target Start/End: Original strand, 26121360 - 26121426
Alignment:
Q  135 atccctgtggatatgatactctacttatcactttattacttggt-aacgatttgatacacttgcctaa 201  Q
    |||||||||||||  |||||||||||| || ||||||||||| | ||||||||| |||||||||||||    
T  26121360 atccctgtggatactatactctactta-cattttattacttgctaaacgatttggtacacttgcctaa 26121426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 195
Target Start/End: Complemental strand, 19051648 - 19051551
Alignment:
Q  98 aaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aacgatttgatacactt 195  Q
    |||||||||||||| ||| || || || | ||| || ||||||| ||||| || |||| ||||||||||||||||||| || ||||||||| |||||||    
T  19051648 aaaaataagtaacaagaattgtttagatggaacaacaatccctg-ggatacgacactcaacttatcactttattactttgtaaacgatttggtacactt 19051551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 201
Target Start/End: Complemental strand, 26120942 - 26120861
Alignment:
Q  120 ttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aacgatttgatacacttgcctaa 201  Q
    |||||||||||||| |||| | || |||||||||||||||||  |||||||||| |||| ||| ||||| ||||||| |||||    
T  26120942 ttggacgaaacgacaatccttttgaatatgatactctactta-aactttattacatggtaaacaatttggtacactttcctaa 26120861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 176
Target Start/End: Complemental strand, 28664874 - 28664796
Alignment:
Q  98 aaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttg 176  Q
    |||||||||||||  ||| || | | |||||| |||  ||||| || ||| ||||||||||||||||||||||||||||    
T  28664874 aaaaataagtaacgagaattgttcgcacgaaaggacagtccctatgaatacgatactctacttatcactttattacttg 28664796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 195
Target Start/End: Original strand, 15492955 - 15492991
Alignment:
Q  159 ttatcactttattacttggtaacgatttgatacactt 195  Q
    |||||||||||| |||||||||||||||| |||||||    
T  15492955 ttatcactttatcacttggtaacgatttggtacactt 15492991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 187
Target Start/End: Complemental strand, 26502181 - 26502130
Alignment:
Q  135 atccctgtggatatgatactctacttatcactttattacttggtaacgatttg 187  Q
    |||| |||||||| || |||| |||||||||||||||||||||||||| ||||    
T  26502181 atccatgtggatacgacactc-acttatcactttattacttggtaacggtttg 26502130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 76; Significance: 2e-35; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 60 - 201
Target Start/End: Complemental strand, 34497254 - 34497111
Alignment:
Q  60 tctctaaccctt-aactcttttattttatatcgtcaactaaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctac 158  Q
    |||||||||||| |||||||||||||||||||||||| | |||||||||||| || | || ||||||||||||||  || || |||||| ||||||||||    
T  34497254 tctctaaccctttaactcttttattttatatcgtcaatttaaaataagtaacgtggattgtttggacgaaacgacagtctctatggatacgatactctac 34497155  T
Q  159 ttatcactttattacttggt-aacgatttgatacacttgcctaa 201  Q
    | |||||||||||||||||| |||||||||||| ||||||||||    
T  34497154 taatcactttattacttggtaaacgatttgatagacttgcctaa 34497111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 75; E-Value: 9e-35
Query Start/End: Original strand, 60 - 201
Target Start/End: Complemental strand, 14528287 - 14528145
Alignment:
Q  60 tctctaacccttaactcttttattttatatcgtcaactaaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctact 159  Q
    |||||||||||||||| ||||||||||||||||||  | |||||||||||| |||  || |||||||||||||| |||  |||||||| ||||||||||     
T  14528287 tctctaacccttaactattttattttatatcgtcagtttaaaataagtaacgtgagttgtttggacgaaacgacaatctatgtggatacgatactctacg 14528188  T
Q  160 tatcactttattacttggt-aacgatttgatacacttgcctaa 201  Q
    ||||||||||||||||||| |||||||||  ||||||||||||    
T  14528187 tatcactttattacttggtaaacgatttggcacacttgcctaa 14528145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 60 - 201
Target Start/End: Original strand, 30806453 - 30806600
Alignment:
Q  60 tctctaacccttaactcttttattttatatcgtcaactaaaaataagtaacatgaagtgcttggacgaaacgacgatccctg-----tggatatgatact 154  Q
    ||||||||||||||||||||||||||||||||||||   ||||||||||||   || || ||||| |||||||| |||| ||     |||||| ||||||    
T  30806453 tctctaacccttaactcttttattttatatcgtcaaactaaaataagtaacgcaaattgtttggatgaaacgacaatccttgtggactggatacgatact 30806552  T
Q  155 ctacttatcactttattacttggt-aacgatttgatacacttgcctaa 201  Q
    |||||||||||||||||||||  | |||||||||||||||||||||||    
T  30806553 ctacttatcactttattacttaataaacgatttgatacacttgcctaa 30806600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 60 - 201
Target Start/End: Complemental strand, 19786869 - 19786727
Alignment:
Q  60 tctctaacccttaactcttttattttatatcgtcaactaaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctact 159  Q
    ||||||||  ||| ||||||||||||||||| |||||| |||| |||||||| ||  || ||||||||||||||  ||||| ||||||||||||| ||||    
T  19786869 tctctaacttttatctcttttattttatatcatcaacttaaaacaagtaacacgagttgtttggacgaaacgacagtccctatggatatgatactttact 19786770  T
Q  160 tatcactttattacttggt-aacgatttgatacacttgcctaa 201  Q
    | ||||||||||||||||| ||||||||| || ||||| ||||    
T  19786769 tgtcactttattacttggtaaacgatttggtatacttgtctaa 19786727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 98 - 201
Target Start/End: Original strand, 29382360 - 29382464
Alignment:
Q  98 aaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aacgatttgatacacttg 196  Q
    |||||||||||||   || || ||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  29382360 aaaaataagtaacgcaaattgtttggatgaaacgacaatccctgtggatacgatactctacttatcactttattacttggtaaacgatttggtacacttg 29382459  T
Q  197 cctaa 201  Q
    |||||    
T  29382460 cctaa 29382464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 1 - 180
Target Start/End: Original strand, 25182333 - 25182509
Alignment:
Q  1 ttttctgcaaccaaaaacaggtaacttgctctatttcaaatagatnnnnnnnnnnnnnntctctaacccttaactcttttattttatatcgtcaactaaa 100  Q
    |||||||||||||||||||||||||||||||| || |||||||||              ||||||||||||| |||||||||||||||||||||||| ||    
T  25182333 ttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgcaa---tctctaacccttatctcttttattttatatcgtcaacttaa 25182429  T
Q  101 aataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggtaa 180  Q
    ||||||||||   |   | || ||||||| ||| |||| |||| ||| |||||||||||| ||||||||||| |||||||    
T  25182430 aataagtaacgcaagcagtttagacgaaatgacaatccatgtgaatacgatactctacttgtcactttattatttggtaa 25182509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 82 - 201
Target Start/End: Original strand, 24114262 - 24114385
Alignment:
Q  82 ttttatatcgtcaact---aaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt 178  Q
    ||||||||||||||||   |||||||||||||   |  || |||||||||||||| ||||||| ||||| |||||||||||||||| |||||||||||||    
T  24114262 ttttatatcgtcaacttacaaaaataagtaacgcaagttgtttggacgaaacgacaatccctgcggatacgatactctacttatcattttattacttggt 24114361  T
Q  179 -aacgatttgatacacttgcctaa 201  Q
     ||| ||||| |||||||||||||    
T  24114362 aaacaatttggtacacttgcctaa 24114385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 100 - 200
Target Start/End: Complemental strand, 24904731 - 24904630
Alignment:
Q  100 aaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aacgatttgatacacttgcc 198  Q
    ||||||||||  |||| || || ||||||||||| ||| |||||||||||||||||||||||||||||||||| ||||| || |||||| ||||||||||    
T  24904731 aaataagtaatgtgaattgtttagacgaaacgacaatcactgtggatatgatactctacttatcactttattatttggtaaatgatttggtacacttgcc 24904632  T
Q  199 ta 200  Q
    ||    
T  24904631 ta 24904630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 120 - 195
Target Start/End: Original strand, 17101914 - 17101990
Alignment:
Q  120 ttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aacgatttgatacactt 195  Q
    ||||| |||||||| |||||| |||||| |||||||||||||||||||||||||||||| |||||||||||||||||    
T  17101914 ttggatgaaacgacaatccctatggatacgatactctacttatcactttattacttggtaaacgatttgatacactt 17101990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 98 - 201
Target Start/End: Complemental strand, 24269697 - 24269594
Alignment:
Q  98 aaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aacgatttgatacacttg 196  Q
    |||||||| |||  |||| || |||||||||||||| ||||||||||||| ||||||||||||| |||||||||||||||| ||  ||||| ||||||||    
T  24269697 aaaaataaataatgtgaattgtttggacgaaacgacaatccctgtggatacgatactctactta-cactttattacttggtaaataatttggtacacttg 24269599  T
Q  197 cctaa 201  Q
    |||||    
T  24269598 cctaa 24269594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 82 - 187
Target Start/End: Complemental strand, 27659564 - 27659455
Alignment:
Q  82 ttttatatcgtcaact---aaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattactt-gg 177  Q
    ||||||||||||||||   |||||||||||||  | | || |||||||||||||| |||| ||| |||| ||||||||||||||||||||||||||| |     
T  27659564 ttttatatcgtcaacttacaaaaataagtaactcggaatgtttggacgaaacgacaatccttgtagatacgatactctacttatcactttattacttcgc 27659465  T
Q  178 taacgatttg 187  Q
    ||||||||||    
T  27659464 taacgatttg 27659455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 97 - 178
Target Start/End: Complemental strand, 17509347 - 17509266
Alignment:
Q  97 taaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt 178  Q
    |||||||||||||   ||| || ||||||||||  || |||| |||||||||||||||||||||||||||||||||||||||    
T  17509347 taaaaataagtaaagagaattgtttggacgaaagaacaatccatgtggatatgatactctacttatcactttattacttggt 17509266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 60 - 160
Target Start/End: Complemental strand, 13697993 - 13697893
Alignment:
Q  60 tctctaacccttaactcttttattttatatcgtcaactaaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctact 159  Q
    ||||||||||||| ||||| |||||||||||||||||| ||||||||||||      || |||||||||||||  |||| |||||||| |||||||||||    
T  13697993 tctctaacccttatctcttgtattttatatcgtcaacttaaaataagtaacgcaggttgtttggacgaaacgaaaatccttgtggatacgatactctact 13697894  T
Q  160 t 160  Q
    |    
T  13697893 t 13697893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 62 - 185
Target Start/End: Complemental strand, 21314757 - 21314636
Alignment:
Q  62 tctaacccttaactcttttattttatatcgtcaactaaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctactta 161  Q
    ||||||| ||||||||| ||||  |||| |  |||||||||||||||||  | | || ||| |||||||||  |||||||| |||| ||||| |||||||    
T  21314757 tctaacctttaactcttctatt--atattggtaactaaaaataagtaacgagtattgtttgcacgaaacgaaaatccctgtagatacgatacactactta 21314660  T
Q  162 tcactttattacttggtaacgatt 185  Q
    ||||||||||||||||||| ||||    
T  21314659 tcactttattacttggtaatgatt 21314636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 84 - 180
Target Start/End: Original strand, 13314975 - 13315073
Alignment:
Q  84 ttatatcgtcaactaa--aaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggtaa 180  Q
    |||||||||||||| |  |||||||||||  ||| || ||||||||||| |  |||| |||||||| |||||| |||||||||||||||||||||||||    
T  13314975 ttatatcgtcaacttataaaataagtaacgcgaattgtttggacgaaacaaaaatccatgtggatacgatactatacttatcactttattacttggtaa 13315073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 123 - 192
Target Start/End: Complemental strand, 2637673 - 2637603
Alignment:
Q  123 gacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aacgatttgataca 192  Q
    ||||||||||| |||| |||||||| |||||||||||||||||||||||||||| | ||| ||||||||||    
T  2637673 gacgaaacgacaatccatgtggatacgatactctacttatcactttattacttgataaacaatttgataca 2637603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 100 - 201
Target Start/End: Complemental strand, 5851039 - 5850937
Alignment:
Q  100 aaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aacgatttgatacacttgcc 198  Q
    |||||||||||| | | || ||||  |||||||| |||  |||||||| |||||||||||||||||||||||||||||| ||||||| | |||||||| |    
T  5851039 aaataagtaacacggattgtttggttgaaacgacaatctatgtggatacgatactctacttatcactttattacttggtaaacgattaggtacacttgac 5850940  T
Q  199 taa 201  Q
    |||    
T  5850939 taa 5850937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 150 - 196
Target Start/End: Original strand, 26615293 - 26615339
Alignment:
Q  150 atactctacttatcactttattacttggtaacgatttgatacacttg 196  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  26615293 atactctacttatcactttattagttggtaacgatttgatacacttg 26615339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 101 - 201
Target Start/End: Complemental strand, 15238896 - 15238795
Alignment:
Q  101 aataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aacgatttgatacacttgcct 199  Q
    ||||||||||  ||| || || ||||||||||| || | |||||||| |||| ||||||||||| ||| ||||||||| ||| |||||||||||||||||    
T  15238896 aataagtaacgcgaattgtttagacgaaacgacaattcatgtggatacgataatctacttatcattttcttacttggtaaacaatttgatacacttgcct 15238797  T
Q  200 aa 201  Q
    ||    
T  15238796 aa 15238795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 120 - 201
Target Start/End: Complemental strand, 6885035 - 6884954
Alignment:
Q  120 ttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggta-acgatttgatacacttgcctaa 201  Q
    |||||||||||||| |||| ||| |||| ||||||| |||||||||||||||||| |||| |||||||  |||||||||||||    
T  6885035 ttggacgaaacgacaatccatgtagatacgatactc-acttatcactttattactgggtacacgatttagtacacttgcctaa 6884954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 140 - 197
Target Start/End: Original strand, 24110696 - 24110754
Alignment:
Q  140 tgtggatatgatactctacttatcactttattacttggt-aacgatttgatacacttgc 197  Q
    |||||||| |||||||||||||||| ||||||||||||| || ||||||||||||||||    
T  24110696 tgtggatacgatactctacttatcattttattacttggtaaatgatttgatacacttgc 24110754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 120 - 201
Target Start/End: Original strand, 30122176 - 30122257
Alignment:
Q  120 ttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggtaa-cgatttgatacacttgcctaa 201  Q
    |||||| ||| ||| |||| |||||||||||||||||||||| ||||||||||||||| ||  |||||| |||||||||||||    
T  30122176 ttggacaaaatgacaatccatgtggatatgatactctactta-cactttattacttggaaagtgatttggtacacttgcctaa 30122257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 140 - 192
Target Start/End: Original strand, 30783782 - 30783835
Alignment:
Q  140 tgtggatatgatactctacttatcactttattacttggt-aacgatttgataca 192  Q
    |||||||| |||||||||||||||||||||||||||||| ||||||||| ||||    
T  30783782 tgtggatacgatactctacttatcactttattacttggtaaacgatttggtaca 30783835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 150 - 201
Target Start/End: Complemental strand, 26008071 - 26008019
Alignment:
Q  150 atactctacttatcactttattacttggt-aacgatttgatacacttgcctaa 201  Q
    ||||||||||||||||||||||||||||| || |||||| |||||||||||||    
T  26008071 atactctacttatcactttattacttggtaaatgatttggtacacttgcctaa 26008019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 123 - 201
Target Start/End: Complemental strand, 17976694 - 17976615
Alignment:
Q  123 gacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aacgatttgatacacttgcctaa 201  Q
    ||||||||||  |||  |||||||| |||||||||||||||||||||||||||| | || ||||||  ||||||||||||    
T  17976694 gacgaaacgaaaatctttgtggatacgatactctacttatcactttattacttgataaatgatttggcacacttgcctaa 17976615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 82 - 180
Target Start/End: Original strand, 18448522 - 18448623
Alignment:
Q  82 ttttatatcgtcaact---aaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt 178  Q
    ||||||||||||||||   |||||||||||||  ||| || |||||| ||||||| ||| || | |||| ||| ||||| |||| |||||||||||||||    
T  18448522 ttttatatcgtcaacttataaaaataagtaacgagaattgtttggacaaaacgacaatctctattgatacgatgctctaattattactttattacttggt 18448621  T
Q  179 aa 180  Q
    ||    
T  18448622 aa 18448623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 201
Target Start/End: Original strand, 28276794 - 28276860
Alignment:
Q  135 atccctgtggatatgatactctacttatcactttattacttggtaa-cgatttgatacacttgcctaa 201  Q
    |||||| |||||| ||||||| |||||||||||| ||| ||||||| |||||||||||||||||||||    
T  28276794 atccctatggatacgatactc-acttatcacttttttatttggtaaacgatttgatacacttgcctaa 28276860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 140 - 201
Target Start/End: Complemental strand, 14006153 - 14006091
Alignment:
Q  140 tgtggatatgatactctacttatcactttattacttggt-aacgatttgatacacttgcctaa 201  Q
    |||| |||||||||||||||||||| ||||||||||||| || ||| |||||||||| |||||    
T  14006153 tgtgaatatgatactctacttatcattttattacttggtaaatgatatgatacacttacctaa 14006091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 126 - 180
Target Start/End: Complemental strand, 14075666 - 14075612
Alignment:
Q  126 gaaacgacgatccctgtggatatgatactctacttatcactttattacttggtaa 180  Q
    |||||||| |||| |||||||| |||| ||||||||||||||| |||||||||||    
T  14075666 gaaacgacaatccatgtggatacgatagtctacttatcactttcttacttggtaa 14075612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 62 - 114
Target Start/End: Original strand, 26394646 - 26394697
Alignment:
Q  62 tctaacccttaactcttttattttatatcgtcaac-taaaaataagtaacatga 114  Q
    ||||||||||||||||||||  ||||||||||||| ||||||||||||||||||    
T  26394646 tctaacccttaactctttta--ttatatcgtcaacttaaaaataagtaacatga 26394697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 180
Target Start/End: Original strand, 44011048 - 44011104
Alignment:
Q  123 gacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggtaa 180  Q
    ||||||||||| |||| |||||||| ||||||||||||| ||||||||||||| ||||    
T  44011048 gacgaaacgacaatccatgtggatacgatactctactta-cactttattacttcgtaa 44011104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 201
Target Start/End: Complemental strand, 31288429 - 31288354
Alignment:
Q  126 gaaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aacgatttgatacacttgcctaa 201  Q
    |||| ||| |||||| |||||| |||||| |||||| |||||||||||||||| ||||||||| ||||||| |||||    
T  31288429 gaaaagacaatccctatggatacgatactttactta-cactttattacttggtaaacgatttggtacactttcctaa 31288354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 2 - 45
Target Start/End: Complemental strand, 6885150 - 6885107
Alignment:
Q  2 tttctgcaaccaaaaacaggtaacttgctctatttcaaatagat 45  Q
    |||||||||||||||||||||||||| ||||||| |||| ||||    
T  6885150 tttctgcaaccaaaaacaggtaacttactctattacaaacagat 6885107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 201
Target Start/End: Original strand, 5052962 - 5053024
Alignment:
Q  140 tgtggatatgatactctacttatcactttattacttggt-aacgatttgatacacttgcctaa 201  Q
    ||||||||  |||||||||||| |||||||||||  ||| ||||||||| |||||||||||||    
T  5052962 tgtggatacaatactctacttagcactttattacccggtaaacgatttggtacacttgcctaa 5053024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 176
Target Start/End: Original strand, 23893200 - 23893278
Alignment:
Q  98 aaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttg 176  Q
    |||||||||||||| ||| || | |||| |||  || |||  ||| |||||||||||||||||||||||| ||||||||    
T  23893200 aaaaataagtaacaagaattgttcggacaaaagaacaatctatgttgatatgatactctacttatcacttcattacttg 23893278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 178
Target Start/End: Original strand, 24723482 - 24723520
Alignment:
Q  140 tgtggatatgatactctacttatcactttattacttggt 178  Q
    |||||||| |||||| |||||||||||||||||||||||    
T  24723482 tgtggatacgatactttacttatcactttattacttggt 24723520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 201
Target Start/End: Complemental strand, 30235419 - 30235373
Alignment:
Q  156 tacttatcactttattacttggt-aacgatttgatacacttgcctaa 201  Q
    ||||||||||||||||||||||| ||||||||  |||||||||||||    
T  30235419 tacttatcactttattacttggtaaacgattttgtacacttgcctaa 30235373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 158
Target Start/End: Complemental strand, 16404012 - 16403952
Alignment:
Q  98 aaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctac 158  Q
    |||||||||||||| ||| || | |||||||| ||| |||| |||||||| ||||||||||    
T  16404012 aaaaataagtaacaagaattgttcggacgaaaggacaatccatgtggatacgatactctac 16403952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 18448447 - 18448491
Alignment:
Q  1 ttttctgcaaccaaaaacaggtaacttgctctatttcaaatagat 45  Q
    |||| ||||||||||||||||||||||||||| || |||| ||||    
T  18448447 ttttatgcaaccaaaaacaggtaacttgctctgttgcaaacagat 18448491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 180
Target Start/End: Complemental strand, 28317467 - 28317432
Alignment:
Q  144 gatatgatactctacttatcactttattacttggtaa 180  Q
    |||||||||||||||||| ||||||||||||||||||    
T  28317467 gatatgatactctactta-cactttattacttggtaa 28317432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 75; Significance: 9e-35; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 75; E-Value: 9e-35
Query Start/End: Original strand, 60 - 201
Target Start/End: Original strand, 168260 - 168401
Alignment:
Q  60 tctctaacccttaactcttttattttatatcgtcaactaaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctact 159  Q
    |||||||||||||  ||||||||||||||||||||||| ||||||||||||| ||  |  || || |||||||| || |||||||||| |||||||||||    
T  168260 tctctaacccttatgtcttttattttatatcgtcaacttaaaataagtaacacgagctatttagaagaaacgacaat-cctgtggatacgatactctact 168358  T
Q  160 tatcactttattacttggt-aacgatttgatacacttgcctaa 201  Q
    ||||||||||||||||||| ||||||||| |||||||||||||    
T  168359 tatcactttattacttggtaaacgatttggtacacttgcctaa 168401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 75; Significance: 9e-35; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 75; E-Value: 9e-35
Query Start/End: Original strand, 60 - 201
Target Start/End: Complemental strand, 14649032 - 14648891
Alignment:
Q  60 tctctaacccttaactcttttattttatatcgtcaactaaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctact 159  Q
    |||||||||||||  ||||||||||||||||||||||| ||||||||||||| ||  |  || || |||||||| || |||||||||| |||||||||||    
T  14649032 tctctaacccttatgtcttttattttatatcgtcaacttaaaataagtaacacgagctatttagaagaaacgacaat-cctgtggatacgatactctact 14648934  T
Q  160 tatcactttattacttggt-aacgatttgatacacttgcctaa 201  Q
    ||||||||||||||||||| ||||||||| |||||||||||||    
T  14648933 tatcactttattacttggtaaacgatttggtacacttgcctaa 14648891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 75; E-Value: 9e-35
Query Start/End: Original strand, 60 - 201
Target Start/End: Complemental strand, 17672140 - 17671998
Alignment:
Q  60 tctctaacccttaactcttttattttatatcgtcaactaaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctact 159  Q
    ||||||||| ||||||||||||||||||||||| |||| ||||||||||||  ||  || || |||||||| || |||| ||||||||  ||||||||||    
T  17672140 tctctaacctttaactcttttattttatatcgttaacttaaaataagtaacgcgagttgtttagacgaaacaacaatccatgtggatacaatactctact 17672041  T
Q  160 tatcactttattacttggt-aacgatttgatacacttgcctaa 201  Q
    ||||||||||||||||||| ||||||||| |||||||||||||    
T  17672040 tatcactttattacttggtaaacgatttggtacacttgcctaa 17671998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 60 - 201
Target Start/End: Original strand, 12578227 - 12578369
Alignment:
Q  60 tctctaacccttaactcttttattttatatcgtcaactaaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctact 159  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||| |||   || || |||||| ||||||| |||| |||||||| ||||||||| |    
T  12578227 tctctaaccctttactcttttattttatatcgtcaacttaaaataagaaacgcaaattgtttggacaaaacgacaatccatgtggatacgatactctaat 12578326  T
Q  160 tatcactttattacttggt-aacgatttgatacacttgcctaa 201  Q
    ||||||||||||| ||||| || |||||| |||||||||||||    
T  12578327 tatcactttattatttggtaaatgatttggtacacttgcctaa 12578369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 60 - 195
Target Start/End: Original strand, 19636548 - 19636682
Alignment:
Q  60 tctctaacccttaactcttttattttatatcgtcaa-ctaaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctac 158  Q
    ||||||||||||||||||||||||||||  |||||| || ||||||||||||||||| || ||||| |||||||| |||||| | ||||  |||||||||    
T  19636548 tctctaacccttaactcttttattttat--cgtcaaacttaaaataagtaacatgaattgtttggatgaaacgacaatccctatagatacaatactctac 19636645  T
Q  159 ttatcactttattacttggtaacgatttgatacactt 195  Q
    ||| ||||||||||||| ||||||||||| |||||||    
T  19636646 ttaccactttattactttgtaacgatttggtacactt 19636682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 98 - 201
Target Start/End: Original strand, 13692668 - 13692772
Alignment:
Q  98 aaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aacgatttgatacacttg 196  Q
    |||||||||||||| ||| || |||| ||||||||| |||| ||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  13692668 aaaaataagtaacacgaattgtttggtcgaaacgacaatccatgtggatatgatactctacttatcactttattacttggtaaacgatttggtacacttg 13692767  T
Q  197 cctaa 201  Q
    |||||    
T  13692768 cctaa 13692772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 62 - 201
Target Start/End: Complemental strand, 5679341 - 5679201
Alignment:
Q  62 tctaacccttaactcttttattttatatcgtcaactaaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctactta 161  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||||||  ||| || ||||||||||| |   | | ||| |||| ||||||||||| |    
T  5679341 tctaacccttaactcttttattttatatcgttaacttaaaataagtaacgcgaattgtttggacgaaacaaaagttcatgtagatacgatactctactaa 5679242  T
Q  162 tcactttattacttggt-aacgatttgatacacttgcctaa 201  Q
    ||||||||||||||||| ||||||||| |||||||| ||||    
T  5679241 tcactttattacttggtaaacgatttggtacacttgtctaa 5679201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 98 - 197
Target Start/End: Complemental strand, 13908954 - 13908854
Alignment:
Q  98 aaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aacgatttgatacacttg 196  Q
    |||||||||||||| ||| || |||||||||||||| |||| |||||||| |||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  13908954 aaaaataagtaacacgaattgtttggacgaaacgacaatccttgtggatacgatactctacttatcactttattacttggtaaacgatttggtacacttg 13908855  T
Q  197 c 197  Q
    |    
T  13908854 c 13908854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 71 - 201
Target Start/End: Complemental strand, 11490659 - 11490528
Alignment:
Q  71 taactcttttattttatatcgtcaactaaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttat 170  Q
    |||||||||||||||||||||||||   ||||||||||||  ||| || ||||| ||||| || ||||||||||||| ||||||||||||||||||||||    
T  11490659 taactcttttattttatatcgtcaaactaaaataagtaacgcgaattgtttggaagaaactacaatccctgtggatacgatactctacttatcactttat 11490560  T
Q  171 tacttggt-aacgatttgatacacttgcctaa 201  Q
    |||||| | ||| ||||| ||||||| |||||    
T  11490559 tacttgataaacaatttggtacactttcctaa 11490528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 60 - 201
Target Start/End: Complemental strand, 19092433 - 19092291
Alignment:
Q  60 tctctaacccttaactcttttattttatatcgtcaactaaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctact 159  Q
    |||||||| |||| ||||||||||| |||||||||||| |||||||| ||| |||  || |||||||||||||| |||| |||| ||  |||||||| ||    
T  19092433 tctctaactcttatctcttttatttaatatcgtcaacttaaaataagcaacgtgagttgtttggacgaaacgacaatccatgtgaatgcgatactcttct 19092334  T
Q  160 tatcactttattacttggt-aacgatttgatacacttgcctaa 201  Q
    ||||||||||||||||| | ||| ||||| |||||||||||||    
T  19092333 tatcactttattacttgataaacaatttggtacacttgcctaa 19092291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 64 - 200
Target Start/End: Original strand, 19929640 - 19929777
Alignment:
Q  64 taacccttaactcttttattttatatcgtcaactaaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatc 163  Q
    ||||||||| |||||||||||||||| ||||||| ||||||||||||| |   |  || ||||||||||| |||| |||||||| ||||||||| |||||    
T  19929640 taacccttatctcttttattttatattgtcaacttaaaataagtaacacgggctatttagacgaaacgacaatccatgtggatacgatactctatttatc 19929739  T
Q  164 actttattacttggt-aacgatttgatacacttgccta 200  Q
    ||||| ||||||||| || |||||| ||||||||||||    
T  19929740 actttgttacttggtaaatgatttggtacacttgccta 19929777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 60 - 200
Target Start/End: Original strand, 22175924 - 22176064
Alignment:
Q  60 tctctaacccttaactcttttattttatatcgtcaactaaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctact 159  Q
    ||||||||||||||||||||||||||||||| |||||| ||||||| | ||  ||| || |||||  ||| ||| ||| || ||||||  ||||||||||    
T  22175924 tctctaacccttaactcttttattttatatcatcaactcaaaataa-ttacgcgaattgtttggagaaaatgacaatctctatggatacaatactctact 22176022  T
Q  160 tatcactttattacttggt-aacgatttgatacacttgccta 200  Q
    ||||||||||||||||| | ||||||||| ||||||||||||    
T  22176023 tatcactttattacttgataaacgatttggtacacttgccta 22176064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 60 - 187
Target Start/End: Original strand, 17337098 - 17337223
Alignment:
Q  60 tctctaacccttaactcttttattttatatcgtcaactaaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctact 159  Q
    |||| ||||||| |||||||||||  |||||||||||||||||||||||||   || || |||||||||| ||| ||| || |||||| |||||||||||    
T  17337098 tctcaaaccctttactcttttatt--atatcgtcaactaaaaataagtaacgcaaattgtttggacgaaatgacaatctctttggatacgatactctact 17337195  T
Q  160 tatcactttattacttggtaacgatttg 187  Q
    |||||| |||||||| ||||| ||||||    
T  17337196 tatcacgttattactcggtaatgatttg 17337223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 60 - 201
Target Start/End: Original strand, 13128837 - 13128977
Alignment:
Q  60 tctctaacccttaactcttttattttatatcgtcaactaaaa--ataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactcta 157  Q
    |||||||||||||  |||||||||  |||| |||||||||||  |||||||||  ||  || |||||||||||||| |||||| ||||||  ||||||||    
T  13128837 tctctaaccctta--tcttttatt--atatggtcaactaaaaaaataagtaacgcgagttgtttggacgaaacgacaatccctatggatacaatactcta 13128932  T
Q  158 cttatcactttattacttggt-aacgatttgatacacttgcctaa 201  Q
    ||||||| ||||||||||||| ||||||||| |||||||||||||    
T  13128933 cttatcattttattacttggtaaacgatttggtacacttgcctaa 13128977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 60 - 201
Target Start/End: Original strand, 17951257 - 17951399
Alignment:
Q  60 tctctaacccttaactcttttattttatatcgtcaactaaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctact 159  Q
    |||||||||| | ||||||||||||||||||||||||| ||||||||||||  ||  |  || ||||||||||| |  ||  |||||| |||||| ||||    
T  17951257 tctctaacccgtcactcttttattttatatcgtcaacttaaaataagtaacgcgagctagttagacgaaacgacaaatccaatggatacgatactttact 17951356  T
Q  160 tatcactttattacttggt-aacgatttgatacacttgcctaa 201  Q
    |||||||||| |||||||| ||||||||| |||||||| ||||    
T  17951357 tatcactttagtacttggtaaacgatttggtacacttgtctaa 17951399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 60 - 201
Target Start/End: Original strand, 17955109 - 17955251
Alignment:
Q  60 tctctaacccttaactcttttattttatatcgtcaactaaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctact 159  Q
    |||||||||| | ||||||||||||||||||||||||| ||||||||||||  ||  |  || ||||||||||| |  ||  |||||| |||||| ||||    
T  17955109 tctctaacccatcactcttttattttatatcgtcaacttaaaataagtaacgcgagctagttagacgaaacgacaaatccaatggatacgatactttact 17955208  T
Q  160 tatcactttattacttggt-aacgatttgatacacttgcctaa 201  Q
    |||||||||| |||||||| ||||||||| |||||||| ||||    
T  17955209 tatcactttagtacttggtaaacgatttggtacacttgtctaa 17955251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 102 - 198
Target Start/End: Complemental strand, 17216913 - 17216816
Alignment:
Q  102 ataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aacgatttgatacacttgcc 198  Q
    |||||||||  ||| || |||||||||||||| |||| |||||||||||||||||||||||||||||||| |||||| ||||||||| |||| |||||    
T  17216913 ataagtaacgagaattgtttggacgaaacgacaatccatgtggatatgatactctacttatcactttattgcttggtaaacgatttggtacatttgcc 17216816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 60 - 195
Target Start/End: Original strand, 24639423 - 24639550
Alignment:
Q  60 tctctaacccttaactcttttattttatatcgtcaactaaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctact 159  Q
    |||||||||||| ||| |||||||  ||||||||||||||||    || |||  || || |||||| ||||||  |||| |||||||| |||||||||||    
T  24639423 tctctaaccctttactattttatt--atatcgtcaactaaaa----gttaca--aattgtttggacaaaacgaaaatccatgtggatacgatactctact 24639514  T
Q  160 tatcactttattacttggtaacgatttgatacactt 195  Q
    ||||||||||||||||||||| ||||||||||||||    
T  24639515 tatcactttattacttggtaatgatttgatacactt 24639550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 100 - 197
Target Start/End: Complemental strand, 20315098 - 20315000
Alignment:
Q  100 aaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aacgatttgatacacttgc 197  Q
    |||||||||||   || || |||||||||||||| |||| ||||||||||||| ||||||||||| ||||||||||||| ||||||||| |||||||||    
T  20315098 aaataagtaacgcaaattgtttggacgaaacgacaatccttgtggatatgatattctacttatcaatttattacttggtaaacgatttggtacacttgc 20315000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 120 - 180
Target Start/End: Complemental strand, 7582375 - 7582315
Alignment:
Q  120 ttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggtaa 180  Q
    ||||||||||| || |||| |||||||||||||||||||||||||||||||||||||||||    
T  7582375 ttggacgaaacaacaatccatgtggatatgatactctacttatcactttattacttggtaa 7582315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 98 - 196
Target Start/End: Original strand, 19492699 - 19492798
Alignment:
Q  98 aaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aacgatttgatacacttg 196  Q
    |||||||||||||  ||| || ||||| |||||||| || | |||||||| ||||||||||||||| |||||||||||||| ||||||||| ||||||||    
T  19492699 aaaaataagtaacgcgaattgtttggatgaaacgacaattcttgtggatacgatactctacttatccctttattacttggtaaacgatttggtacacttg 19492798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 100 - 201
Target Start/End: Complemental strand, 19882738 - 19882636
Alignment:
Q  100 aaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aacgatttgatacacttgcc 198  Q
    |||||||||||  ||| || |||||||||||||| |||| ||| |||| ||||||||||| |||||||||||||||| | ||||||||  ||||||||||    
T  19882738 aaataagtaacgcgaattgtttggacgaaacgacaatccatgttgatacgatactctactaatcactttattacttgataaacgattttgtacacttgcc 19882639  T
Q  199 taa 201  Q
    |||    
T  19882638 taa 19882636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 61 - 201
Target Start/End: Complemental strand, 40227911 - 40227773
Alignment:
Q  61 ctctaacccttaactcttttattttatatcgtcaa-ctaaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctact 159  Q
    ||||| ||||| |||||||||| ||||  |||||| |||||||||||||||  ||| || ||||| ||||| || || ||| ||||||  ||| |  |||    
T  40227911 ctctagccctttactcttttatattat--cgtcaaactaaaaataagtaacgcgaattgtttggatgaaactacaattcctatggatacaatatta-act 40227815  T
Q  160 tatcactttattacttggtaacgatttgatacacttgcctaa 201  Q
    |||||||||||||||||||||||||||| |||||||||||||    
T  40227814 tatcactttattacttggtaacgatttggtacacttgcctaa 40227773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 60 - 180
Target Start/End: Original strand, 22357493 - 22357616
Alignment:
Q  60 tctctaacccttaactcttttattttatatcgtcaactaaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatga---tactct 156  Q
    |||||||| |||| ||||| | ||||||||||||||||  |||||||||||| ||| || ||  | |||||||| |||| |||||||| ||   |||| |    
T  22357493 tctctaactcttatctcttattttttatatcgtcaactttaaataagtaacacgaactgtttaaatgaaacgacaatccatgtggatacgatagtacttt 22357592  T
Q  157 acttatcactttattacttggtaa 180  Q
    ||||||||||||||||||||||||    
T  22357593 acttatcactttattacttggtaa 22357616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 98 - 201
Target Start/End: Original strand, 21323874 - 21323978
Alignment:
Q  98 aaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aacgatttgatacacttg 196  Q
    |||||||||||||  ||| || |||||||||||||| |||  |||||||| ||||||||||| ||||| |||||| ||||| ||||||||  ||||||||    
T  21323874 aaaaataagtaacgcgaattgtttggacgaaacgacaatctatgtggatacgatactctactgatcacattattatttggtaaacgatttagtacacttg 21323973  T
Q  197 cctaa 201  Q
    |||||    
T  21323974 cctaa 21323978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 126 - 195
Target Start/End: Complemental strand, 11094036 - 11093966
Alignment:
Q  126 gaaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aacgatttgatacactt 195  Q
    |||||||| ||| |||||||||||| ||||||| ||||| ||||||||||||| |||||||||||||||||    
T  11094036 gaaacgacaatctctgtggatatgacactctacctatcattttattacttggtaaacgatttgatacactt 11093966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 102 - 180
Target Start/End: Original strand, 13992879 - 13992957
Alignment:
Q  102 ataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggtaa 180  Q
    |||||||||| ||| || |||||| ||||||  |||| |||||||| ||||||||||||| ||||||||||||||||||    
T  13992879 ataagtaacacgaattgtttggacaaaacgaaaatccatgtggatacgatactctacttaccactttattacttggtaa 13992957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 98 - 196
Target Start/End: Complemental strand, 15164867 - 15164768
Alignment:
Q  98 aaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aacgatttgatacacttg 196  Q
    |||||||||||||   || || |||||||||| ||| ||||||||||||| |||||||| ||||| | || |||||||||| ||||||||| ||||||||    
T  15164867 aaaaataagtaacgcaaattgtttggacgaaatgacaatccctgtggatacgatactctgcttattaattgattacttggtaaacgatttggtacacttg 15164768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 135 - 197
Target Start/End: Complemental strand, 17709820 - 17709757
Alignment:
Q  135 atccctgtggatatgatactctacttatcactttattacttggt-aacgatttgatacacttgc 197  Q
    |||||| ||||||  ||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  17709820 atccctatggatacaatactctacttatcactttattacttggtaaacgatttggtacacttgc 17709757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 100 - 201
Target Start/End: Original strand, 25121227 - 25121328
Alignment:
Q  100 aaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aacgatttgatacacttgcc 198  Q
    |||||||||||  ||| || ||||||||||| || |||| |||||||| |||||| |||||| |||||||||||||||| |||||||||  |||||| ||    
T  25121227 aaataagtaacgcgaattgtttggacgaaaccacaatccttgtggatacgatactatactta-cactttattacttggtaaacgatttggaacactttcc 25121325  T
Q  199 taa 201  Q
    |||    
T  25121326 taa 25121328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 101 - 201
Target Start/End: Complemental strand, 3774923 - 3774821
Alignment:
Q  101 aataagtaacatgaagtgcttggacgaaacgacg--atccctgtggatatgatactctacttatcactttattacttggt-aacgatttgatacacttgc 197  Q
    |||||||||| |||| || ||||| ||||||||   || | |||||||||||||||||||||  ||||||||||||| || ||| |||||||||||||||    
T  3774923 aataagtaacgtgaattgtttggatgaaacgacacaattcatgtggatatgatactctactt-gcactttattacttagtaaacaatttgatacacttgc 3774825  T
Q  198 ctaa 201  Q
    ||||    
T  3774824 ctaa 3774821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 123 - 201
Target Start/End: Original strand, 9737528 - 9737612
Alignment:
Q  123 gacgaaacgacgatccctgtggatatgatactctactt-----atcactttattacttggt-aacgatttgatacacttgcctaa 201  Q
    |||||||| || |||| |||||||| ||||||||||||     |||||||||||||||||| ||||||||| |||||||||||||    
T  9737528 gacgaaactacaatccatgtggatacgatactctactttactgatcactttattacttggtaaacgatttggtacacttgcctaa 9737612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 150 - 201
Target Start/End: Complemental strand, 12318481 - 12318429
Alignment:
Q  150 atactctacttatcactttattacttgg-taacgatttgatacacttgcctaa 201  Q
    |||||||||||||||||||||||||||| ||| |||||| |||||||||||||    
T  12318481 atactctacttatcactttattacttggttaatgatttggtacacttgcctaa 12318429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 98 - 197
Target Start/End: Original strand, 19562177 - 19562277
Alignment:
Q  98 aaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aacgatttgatacacttg 196  Q
    |||||||||||| |  || || ||||| |||||||| || | |||||| | |||||| ||||||||||||||||||||||| || |||||| ||||||||    
T  19562177 aaaaataagtaatacaaattgtttggatgaaacgacaatacttgtggacacgatactttacttatcactttattacttggtaaatgatttggtacacttg 19562276  T
Q  197 c 197  Q
    |    
T  19562277 c 19562277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 191
Target Start/End: Complemental strand, 10589781 - 10589719
Alignment:
Q  128 aacgacgatccctgtggatatgatactctacttatcactttattacttggtaacgatttgatac 191  Q
    |||||| |||||||| |||| || |||| |||||||||||||||||||||||| ||||||||||    
T  10589781 aacgacaatccctgttgatacgacactc-acttatcactttattacttggtaaggatttgatac 10589719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 123 - 201
Target Start/End: Complemental strand, 15047203 - 15047124
Alignment:
Q  123 gacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aacgatttgatacacttgcctaa 201  Q
    ||||||||||  |||| ||| |||| ||| |||||||||||||||||||||||||| |||||||||  |||||| |||||    
T  15047203 gacgaaacgaaaatccatgtagatacgatcctctacttatcactttattacttggtaaacgatttggaacactttcctaa 15047124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 123 - 201
Target Start/End: Original strand, 15107221 - 15107300
Alignment:
Q  123 gacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aacgatttgatacacttgcctaa 201  Q
    ||||||||||  |||| ||| |||| ||| |||||||||||||||||||||||||| |||||||||  |||||| |||||    
T  15107221 gacgaaacgaaaatccatgtagatacgatcctctacttatcactttattacttggtaaacgatttggaacactttcctaa 15107300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 98 - 176
Target Start/End: Complemental strand, 25094668 - 25094589
Alignment:
Q  98 aaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctactta-tcactttattacttg 176  Q
    |||| ||||||||| ||| || ||||||||||  || |||| |||||||||||||||||||||| | |||||||||||||    
T  25094668 aaaattaagtaacaagaattgtttggacgaaagaacaatccatgtggatatgatactctacttactaactttattacttg 25094589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 126 - 195
Target Start/End: Original strand, 11521218 - 11521288
Alignment:
Q  126 gaaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aacgatttgatacactt 195  Q
    |||||||| |||| |||| ||| |||||||||||||||||||||||| ||| | ||||||||| |||||||    
T  11521218 gaaacgacaatccatgtgtatacgatactctacttatcactttattatttgataaacgatttggtacactt 11521288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 140 - 201
Target Start/End: Complemental strand, 19900637 - 19900576
Alignment:
Q  140 tgtggatatgatactctacttatcactttattacttggt-aacgatttgatacacttgcctaa 201  Q
    |||| ||||||||||||||||| |||||||||||||||| ||| ||||| |||||||||||||    
T  19900637 tgtgaatatgatactctactta-cactttattacttggtaaacaatttggtacacttgcctaa 19900576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 124 - 201
Target Start/End: Original strand, 20829764 - 20829841
Alignment:
Q  124 acgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aacgatttgatacacttgcctaa 201  Q
    ||||||| || |||| ||||||||  |||||| | |||||||||||||||||||| ||||||||| |||||||||||||    
T  20829764 acgaaacaacaatccttgtggatacaatactc-agttatcactttattacttggtaaacgatttggtacacttgcctaa 20829841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 201
Target Start/End: Original strand, 1833648 - 1833696
Alignment:
Q  154 tctacttatcactttattacttggt-aacgatttgatacacttgcctaa 201  Q
    ||||||||||||||||||||||||| |||||||||||  ||||||||||    
T  1833648 tctacttatcactttattacttggtaaacgatttgatgtacttgcctaa 1833696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 180
Target Start/End: Original strand, 8969707 - 8969802
Alignment:
Q  84 ttatatcgtcaactaaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggtaa 180  Q
    ||||||||||||   ||||||||||||| ||| || |||||||||||||| ||| | || |||| | | ||||||||| ||||||||||||| ||||    
T  8969707 ttatatcgtcaaaacaaaataagtaacacgaattgtttggacgaaacgacaatctcagtagatacgttgctctactta-cactttattactttgtaa 8969802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 99 - 201
Target Start/End: Complemental strand, 9052772 - 9052670
Alignment:
Q  99 aaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aacgatttgatacacttgc 197  Q
    |||||||||||| |||| || ||||  ||||| || |||  || ||||| ||||||||||||| || ||||||||||||| || |||||| |||||||||    
T  9052772 aaaataagtaacgtgaattgtttggttgaaacaacaatctttgcggatacgatactctactta-cattttattacttggtaaatgatttggtacacttgc 9052674  T
Q  198 ctaa 201  Q
    ||||    
T  9052673 ctaa 9052670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 99 - 201
Target Start/End: Complemental strand, 11933517 - 11933415
Alignment:
Q  99 aaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aacgatttgatacacttgc 197  Q
    ||||||||||||  ||  || |||||||||||||| |||| |||||  | ||||||| ||||||||||| |||||||||| ||||||| |  ||||||||    
T  11933517 aaaataagtaacgcgagttgtttggacgaaacgacaatccatgtggtcacgatactc-acttatcacttcattacttggtaaacgattaggaacacttgc 11933419  T
Q  198 ctaa 201  Q
    ||||    
T  11933418 ctaa 11933415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 126 - 192
Target Start/End: Complemental strand, 22526436 - 22526369
Alignment:
Q  126 gaaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aacgatttgataca 192  Q
    |||||||| || | |||||||| |||||||||||||||||||||||| ||| | ||||||||| ||||    
T  22526436 gaaacgacaattcatgtggatacgatactctacttatcactttattatttgataaacgatttggtaca 22526369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 201
Target Start/End: Complemental strand, 10107080 - 10107007
Alignment:
Q  128 aacgacgatccctgtggatatgatactctacttatcactttattacttggtaa-cgatttgatacacttgcctaa 201  Q
    |||||| |||||| ||||||  |||||||||||  || ||||||||||||||| ||||||| |||||||||||||    
T  10107080 aacgacaatccctatggatagaatactctacttg-caatttattacttggtaaacgatttgctacacttgcctaa 10107007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 201
Target Start/End: Original strand, 11700610 - 11700672
Alignment:
Q  140 tgtggatatgatactctacttatcactttattacttggt-aacgatttgatacacttgcctaa 201  Q
    |||||||| ||||||||| |||||| ||||||||||||| ||| ||||| |||||||| ||||    
T  11700610 tgtggatacgatactctatttatcattttattacttggtaaacaatttggtacacttgtctaa 11700672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 168
Target Start/End: Original strand, 16730398 - 16730468
Alignment:
Q  98 aaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcacttt 168  Q
    |||||||||||||  ||  || |||||||||||||  |||| | |||||| ||||||||||||||||||||    
T  16730398 aaaaataagtaacgcgagttgtttggacgaaacgaaaatccttttggatacgatactctacttatcacttt 16730468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 201
Target Start/End: Original strand, 15050138 - 15050185
Alignment:
Q  154 tctacttatcactttattacttggtaac-gatttgatacacttgcctaa 201  Q
    |||||||| ||||||||||||||||||  ||||||||||||||||||||    
T  15050138 tctactta-cactttattacttggtaaatgatttgatacacttgcctaa 15050185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 201
Target Start/End: Complemental strand, 15104286 - 15104239
Alignment:
Q  154 tctacttatcactttattacttggtaac-gatttgatacacttgcctaa 201  Q
    |||||||| ||||||||||||||||||  ||||||||||||||||||||    
T  15104286 tctactta-cactttattacttggtaaatgatttgatacacttgcctaa 15104239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 195
Target Start/End: Original strand, 19374834 - 19374909
Alignment:
Q  120 ttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aacgatttgatacactt 195  Q
    |||||| ||||||| ||| | ||||||| ||||||||||||| || ||||||||||| | ||||||||| |||||||    
T  19374834 ttggacaaaacgacaatctcagtggatacgatactctactta-cattttattacttgataaacgatttggtacactt 19374909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 176
Target Start/End: Complemental strand, 25097936 - 25097856
Alignment:
Q  97 taaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctactta-tcactttattacttg 176  Q
    ||||||||||||||||||| |  | |||| |||  || |||| |||||||| ||||||||||||| | |||||||||||||    
T  25097936 taaaaataagtaacatgaatttttcggacaaaagaacaatccatgtggatacgatactctacttactaactttattacttg 25097856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 75; Significance: 9e-35; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 75; E-Value: 9e-35
Query Start/End: Original strand, 60 - 201
Target Start/End: Original strand, 12805851 - 12805993
Alignment:
Q  60 tctctaacccttaactcttttattttatatcgtcaactaaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctact 159  Q
    |||||||||||| | |||||||||||||| |||| ||| ||||||||||||   || || ||||| |||||||| |||| ||||||||||||||||||||    
T  12805851 tctctaaccctttaatcttttattttataacgtcgacttaaaataagtaacgcaaattgtttggatgaaacgacaatccatgtggatatgatactctact 12805950  T
Q  160 tatcactttattacttggt-aacgatttgatacacttgcctaa 201  Q
    ||||||||||||||||||| || |||||| |||||||||||||    
T  12805951 tatcactttattacttggtaaatgatttggtacacttgcctaa 12805993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 60 - 201
Target Start/End: Original strand, 2167579 - 2167719
Alignment:
Q  60 tctctaacccttaactcttttattttatatcgtcaa-ctaaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctac 158  Q
    ||||||||| || ||||||||||||||||  ||||| ||||||||||||||  |||| || ||||||||||||||  |   |||||||| ||||||||||    
T  2167579 tctctaaccatttactcttttattttata--gtcaaactaaaaataagtaatgtgaattgtttggacgaaacgacattttatgtggatacgatactctac 2167676  T
Q  159 ttatcactttattacttggtaacgatttgatacacttgcctaa 201  Q
    ||||||||||||||||||||||||||||| |||||||| ||||    
T  2167677 ttatcactttattacttggtaacgatttggtacacttgtctaa 2167719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 16245635 - 16245832
Alignment:
Q  1 ttttctgcaaccaaaaacaggtaacttgctctatttcaaatagatnnnnnnnnnnnnnntctctaacccttaactcttttattttatatcgtcaactaaa 100  Q
    |||||||||||||||||||||||||||||||| || |||||||||              ||||||||||||||||||||||||||||   |||||   ||    
T  16245635 ttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgcaaa--tctctaacccttaactcttttattttatt--gtcaaactaa 16245730  T
Q  101 aataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aacgatttgatacacttgcct 199  Q
    ||||||||||  ||| || |||||||||| ||  |||| ||||||||||||||||||||||||||||||||||||||| ||||| ||| |||||||| ||    
T  16245731 aataagtaacgagaattgtttggacgaaatgataatccatgtggatatgatactctacttatcactttattacttggtaaacgagttggtacacttgtct 16245830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 60 - 201
Target Start/End: Complemental strand, 21325479 - 21325336
Alignment:
Q  60 tctctaaccctt-aactcttttattttatatcgtcaactaaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctac 158  Q
    |||||||||||| ||||||||||||||||||||| |||| |||||||||||||  || || |||||||||||||| ||   |||||||| |||||| |||    
T  21325479 tctctaacccttcaactcttttattttatatcgttaacttaaaataagtaacacaaattgtttggacgaaacgacaatttttgtggatacgatactatac 21325380  T
Q  159 ttatcactttattacttggt-aacgatttgatacacttgcctaa 201  Q
    |||||| ||||||||||||| ||| ||||| |||||||||||||    
T  21325379 ttatcagtttattacttggtaaacaatttggtacacttgcctaa 21325336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 98 - 195
Target Start/End: Original strand, 17438430 - 17438527
Alignment:
Q  98 aaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggtaacgatttgatacactt 195  Q
    ||||||||||||| |||| || |||||||||||||| |||| ||||||||||||||||||||||||| ||||| |||||||||||||||| |||||||    
T  17438430 aaaaataagtaacgtgaattgtttggacgaaacgacaatccatgtggatatgatactctacttatcattttataacttggtaacgatttggtacactt 17438527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 60 - 180
Target Start/End: Complemental strand, 8319177 - 8319057
Alignment:
Q  60 tctctaacccttaactcttttattttatatcgtcaactaaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctact 159  Q
    |||||||| |||| ||||| ||||||||||| |||||| ||||||||||||||||| || ||| |||||||||  |||||||||||||  ||| ||||||    
T  8319177 tctctaactcttatctcttgtattttatatcatcaacttaaaataagtaacatgaattgtttgtacgaaacgataatccctgtggatactatattctact 8319078  T
Q  160 tatcactttattacttggtaa 180  Q
    |||||||| ||||||||||||    
T  8319077 tatcacttcattacttggtaa 8319057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 87 - 201
Target Start/End: Original strand, 3116407 - 3116521
Alignment:
Q  87 tatcgtcaactaaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aacgatt 185  Q
    ||||||||||| |||||||||||| |||| || |||||||||||||| |||||||||||||  |||||| |||||||||||||||||||||| ||| |||    
T  3116407 tatcgtcaacttaaaataagtaacgtgaattgtttggacgaaacgacaatccctgtggatactatactc-acttatcactttattacttggtaaacaatt 3116505  T
Q  186 tgatacacttgcctaa 201  Q
    || |||||||||||||    
T  3116506 tggtacacttgcctaa 3116521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 60 - 197
Target Start/End: Original strand, 21303315 - 21303453
Alignment:
Q  60 tctctaacccttaactcttttattttatatcgtcaactaaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctact 159  Q
    |||||||||||| ||||||||||||||||| ||||||| ||||||||||||   || || ||||| ||||| || |||  ||||| || |||||||||||    
T  21303315 tctctaaccctttactcttttattttatatagtcaacttaaaataagtaacggaaattgtttggatgaaacaacaatctttgtggctacgatactctact 21303414  T
Q  160 tatcactttattacttggt-aacgatttgatacacttgc 197  Q
    ||||| ||||||| ||||| |||||||||||||||||||    
T  21303415 tatcattttattatttggtaaacgatttgatacacttgc 21303453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 98 - 201
Target Start/End: Complemental strand, 21302018 - 21301914
Alignment:
Q  98 aaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aacgatttgatacacttg 196  Q
    |||||||||||||  ||| || |||||||||| ||| |||| |||||||| |||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  21302018 aaaaataagtaactcgaattgtttggacgaaatgacaatccatgtggatacgatactctacttatcactttattacttggtaaacgatttggtacacttg 21301919  T
Q  197 cctaa 201  Q
    |||||    
T  21301918 cctaa 21301914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 135 - 201
Target Start/End: Complemental strand, 6289966 - 6289899
Alignment:
Q  135 atccctgtggatatgatactctacttatcactttattacttggt-aacgatttgatacacttgcctaa 201  Q
    |||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  6289966 atccatgtggatatgatactctacttatcactttattacttggtaaacgatttgatacatttgcctaa 6289899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 98 - 199
Target Start/End: Complemental strand, 12411251 - 12411149
Alignment:
Q  98 aaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggtaa-cgatttgatacacttg 196  Q
    ||||||||||||| | || || ||| |||||||||| |||| |||||||| ||||||||||| ||||||||||||||||||||  |||||| ||||||||    
T  12411251 aaaaataagtaacctaaattgtttgtacgaaacgacaatccttgtggatacgatactctactaatcactttattacttggtaagtgatttggtacacttg 12411152  T
Q  197 cct 199  Q
    |||    
T  12411151 cct 12411149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 100 - 180
Target Start/End: Original strand, 821515 - 821595
Alignment:
Q  100 aaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggtaa 180  Q
    |||||||||||||||| || ||  |||||||||  |||| |||||||| ||||||||||||||||||||||||||||||||    
T  821515 aaataagtaacatgaattgtttacacgaaacgaaaatccatgtggatacgatactctacttatcactttattacttggtaa 821595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 60 - 201
Target Start/End: Complemental strand, 41508504 - 41508363
Alignment:
Q  60 tctctaacccttaactcttttattttatatcgtc-aactaaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctac 158  Q
    |||||||||||||||||||||||||  ||||||| || |||||||||||||    || || |||||| ||||||| ||||| |  |||| |||| |||||    
T  41508504 tctctaacccttaactcttttattt--tatcgtcaaattaaaaataagtaatgcaaattgtttggactaaacgacaatccccgcagatacgatattctac 41508407  T
Q  159 ttatcactttattacttggt-aacgatttgatacacttgcctaa 201  Q
     ||||||||||||||||| | ||||||||| |||||||||||||    
T  41508406 ctatcactttattacttgataaacgatttggtacacttgcctaa 41508363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 87 - 201
Target Start/End: Complemental strand, 5508446 - 5508332
Alignment:
Q  87 tatcgtcaactaaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttgg-taacgatt 185  Q
    |||||||| || ||||||||||||  ||  || |||||||||||||| |||| ||||||||| |||||| |||||||||||||||||||||  || ||||    
T  5508446 tatcgtcaccttaaaataagtaacgcgagatgtttggacgaaacgacaatccatgtggatattatactc-acttatcactttattacttggcaaatgatt 5508348  T
Q  186 tgatacacttgcctaa 201  Q
    || |||||||||||||    
T  5508347 tggtacacttgcctaa 5508332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 123 - 201
Target Start/End: Complemental strand, 10744977 - 10744898
Alignment:
Q  123 gacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aacgatttgatacacttgcctaa 201  Q
    ||||||||||| |||||| |||| | |||||||||||||||||||||||||||||| ||||||||| || ||||||||||    
T  10744977 gacgaaacgacaatccctatggaaacgatactctacttatcactttattacttggtaaacgatttggtaaacttgcctaa 10744898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 123 - 201
Target Start/End: Complemental strand, 10917993 - 10917914
Alignment:
Q  123 gacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aacgatttgatacacttgcctaa 201  Q
    |||||||| || |||| |||||||| |||||||||||||||||||||||| ||||| ||||||||| |||||||||||||    
T  10917993 gacgaaacaacaatccatgtggatacgatactctacttatcactttattatttggtaaacgatttggtacacttgcctaa 10917914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 126 - 201
Target Start/End: Original strand, 13908253 - 13908328
Alignment:
Q  126 gaaacgacgatccctgtggatatgatactctacttatcactttattacttggtaacgatttgatacacttgcctaa 201  Q
    |||||||  |||||| |||||||||||||||||||||||||||||||||||| || |||||| ||||||| |||||    
T  13908253 gaaacgataatccctatggatatgatactctacttatcactttattacttggaaaagatttggtacactttcctaa 13908328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 98 - 196
Target Start/End: Complemental strand, 22349509 - 22349410
Alignment:
Q  98 aaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aacgatttgatacacttg 196  Q
    ||||||||||||  |||| || |||||||||||||| ||   |||||||| |||||||||||||||||||||||| ||||| ||||||||| ||||||||    
T  22349509 aaaaataagtaatgtgaattgtttggacgaaacgacaatttatgtggatacgatactctacttatcactttattatttggtaaacgatttggtacacttg 22349410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 98 - 197
Target Start/End: Complemental strand, 19908407 - 19908307
Alignment:
Q  98 aaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aacgatttgatacacttg 196  Q
    ||||||| || || |||| || |||||||||||||||| || |||||||| |||||| ||||||||| ||||||| ||||| ||||||||| ||||||||    
T  19908407 aaaaataggttacgtgaattgtttggacgaaacgacgacccttgtggatacgatactatacttatcattttattatttggtaaacgatttggtacacttg 19908308  T
Q  197 c 197  Q
    |    
T  19908307 c 19908307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 145 - 197
Target Start/End: Original strand, 51119289 - 51119341
Alignment:
Q  145 atatgatactctacttatcactttattacttggtaacgatttgatacacttgc 197  Q
    |||||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  51119289 atatgatactttacttatcactttattatttggtaacgatttgatacacttgc 51119341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 126 - 201
Target Start/End: Complemental strand, 12759459 - 12759383
Alignment:
Q  126 gaaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aacgatttgatacacttgcctaa 201  Q
    |||||||| || | |||||||| |||||||||||||||||||||||||||||| ||| ||||| |||||||| ||||    
T  12759459 gaaacgacaatacttgtggatacgatactctacttatcactttattacttggtaaacaatttggtacacttgtctaa 12759383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 180
Target Start/End: Original strand, 19171855 - 19171915
Alignment:
Q  120 ttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggtaa 180  Q
    |||||||||||||| |||| |||| ||||||| |||| |||||||||||||||||||||||    
T  19171855 ttggacgaaacgacaatccttgtgaatatgatcctctgcttatcactttattacttggtaa 19171915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 101 - 180
Target Start/End: Complemental strand, 4650328 - 4650249
Alignment:
Q  101 aataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggtaa 180  Q
    ||||||||||  ||| || |||| ||||| ||| ||||||||||||| |||||| |||| ||||||||||||||||||||    
T  4650328 aataagtaacgcgaattgtttgggcgaaaggacaatccctgtggatacgatactttactcatcactttattacttggtaa 4650249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 139 - 197
Target Start/End: Original strand, 11518001 - 11518060
Alignment:
Q  139 ctgtggatatgatactctacttatcactttattacttggt-aacgatttgatacacttgc 197  Q
    |||||||||||||| ||||||||||||||||||||||| | ||||||||| |||||||||    
T  11518001 ctgtggatatgatattctacttatcactttattacttgatgaacgatttggtacacttgc 11518060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 97 - 198
Target Start/End: Complemental strand, 932843 - 932742
Alignment:
Q  97 taaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aacgatttgatacactt 195  Q
    |||||||||||||  |||| |  |||||||||| ||| ||| ||||||||| ||||||||| |||||| |||||||||| || ||||| |||||||||||    
T  932843 taaaaataagtaatgtgaattttttggacgaaaggacaatctctgtggatacgatactctatttatcaatttattacttagtaaacga-ttgatacactt 932745  T
Q  196 gcc 198  Q
    |||    
T  932744 gcc 932742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 126 - 180
Target Start/End: Original strand, 8557156 - 8557210
Alignment:
Q  126 gaaacgacgatccctgtggatatgatactctacttatcactttattacttggtaa 180  Q
    |||||||| |||| |||||||| |||||||||||||||||||||||||| |||||    
T  8557156 gaaacgacaatccatgtggatacgatactctacttatcactttattactcggtaa 8557210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 98 - 176
Target Start/End: Original strand, 8889151 - 8889229
Alignment:
Q  98 aaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttg 176  Q
    |||||||||||||  ||| || | | |||||| ||| |||||||||||||  |||||||||||||||||||||||||||    
T  8889151 aaaaataagtaacgagaattgttcgaacgaaaggacaatccctgtggatacaatactctacttatcactttattacttg 8889229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 100 - 201
Target Start/End: Original strand, 21825870 - 21825971
Alignment:
Q  100 aaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aacgatttgatacacttgcc 198  Q
    |||||||||||  ||| || ||||||||||| |  |||| |||||||| ||||||||||||| |||||||||||| ||| ||||||||| ||||||| ||    
T  21825870 aaataagtaacgcgaactgtttggacgaaacaaaaatccatgtggatacgatactctactta-cactttattactcggtaaacgatttggtacacttacc 21825968  T
Q  199 taa 201  Q
    |||    
T  21825969 taa 21825971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 198
Target Start/End: Complemental strand, 8770119 - 8770019
Alignment:
Q  98 aaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttgg-taacgatttgatacacttg 196  Q
    |||| ||||||||| ||| || |  ||| ||| ||| |||| ||||||||||||||| |||||||||||||||||||||| |||||| ||| ||||||||    
T  8770119 aaaactaagtaacaagaattgttcagacaaaaggacaatccatgtggatatgatactttacttatcactttattacttggttaacga-ttggtacacttg 8770021  T
Q  197 cc 198  Q
    ||    
T  8770020 cc 8770019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 140 - 201
Target Start/End: Complemental strand, 21083368 - 21083307
Alignment:
Q  140 tgtggatatgatactctacttatcactttattacttggtaacgatttgatacacttgcctaa 201  Q
    |||||||| |||||| ||||| ||| ||||||| |||||||||||||| |||||||||||||    
T  21083368 tgtggatacgatactttacttgtcattttattatttggtaacgatttgttacacttgcctaa 21083307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 97 - 177
Target Start/End: Original strand, 19925621 - 19925701
Alignment:
Q  97 taaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttgg 177  Q
    ||||||||||||||  ||| |  |||||||||| ||| |||| |||||||| |||||||||| |||||| |||||||||||    
T  19925621 taaaaataagtaacgcgaattatttggacgaaaagacaatccatgtggatacgatactctacatatcaccttattacttgg 19925701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 126 - 201
Target Start/End: Complemental strand, 28729016 - 28728940
Alignment:
Q  126 gaaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aacgatttgatacacttgcctaa 201  Q
    |||||||| |||  |||||||| |||||||||||||||||||||||||||| | ||  |||||| ||||||||||||    
T  28729016 gaaacgacaatctatgtggatacgatactctacttatcactttattacttgataaattatttgacacacttgcctaa 28728940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 140 - 201
Target Start/End: Original strand, 18458465 - 18458527
Alignment:
Q  140 tgtggatatgatactctacttatcactttattacttggt-aacgatttgatacacttgcctaa 201  Q
    |||||||| |||||||||||||||||||||||||||| | ||| ||||| |||||||| ||||    
T  18458465 tgtggatacgatactctacttatcactttattacttgataaacaatttggtacacttgtctaa 18458527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 62 - 180
Target Start/End: Complemental strand, 20429845 - 20429728
Alignment:
Q  62 tctaacccttaactcttttattttatatcgtcaac--taaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctact 159  Q
    ||||||||||| ||||||||||  ||||||||||   ||||||||||||||  ||| ||  |||| |||| ||| |||| | | |||| |||||||||||    
T  20429845 tctaaccctta-ctcttttatt--atatcgtcaaacttaaaaataagtaacgcgaattgtgtggatgaaatgacaatccttatagatacgatactctact 20429749  T
Q  160 tatcactttattacttggtaa 180  Q
    ||||| |||||||||||||||    
T  20429748 tatcattttattacttggtaa 20429728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 62 - 115
Target Start/End: Original strand, 2723798 - 2723851
Alignment:
Q  62 tctaacccttaactcttttattttatatcgtcaactaaaaataagtaacatgaa 115  Q
    ||||||||||||||| ||||||||||||| ||||   |||||||||||||||||    
T  2723798 tctaacccttaactcatttattttatatcatcaaactaaaataagtaacatgaa 2723851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 84 - 180
Target Start/End: Original strand, 7495079 - 7495171
Alignment:
Q  84 ttatatcgtcaactaaaa-ataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggtaa 180  Q
    ||||||| |||||||||| ||||||||| | || || ||||||||||||||||||| |||||||  |||||||     |||||||||||| |||||||    
T  7495079 ttatatcatcaactaaaaaataagtaacgttaattgtttggacgaaacgacgatccatgtggattcgatactc-----atcactttattatttggtaa 7495171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 195
Target Start/End: Original strand, 27542956 - 27543011
Alignment:
Q  140 tgtggatatgatactctacttatcactttattacttggt-aacgatttgatacactt 195  Q
    |||||||| |||||||||||||| |||||||| |||||| |||||||||||||||||    
T  27542956 tgtggatacgatactctacttat-actttatttcttggtaaacgatttgatacactt 27543011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 123 - 201
Target Start/End: Original strand, 18736696 - 18736774
Alignment:
Q  123 gacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aacgatttgatacacttgcctaa 201  Q
    ||||||||||| |  ||||| |||| |||| ||||||||| ||||||||||||||| ||||||||| |||||||| ||||    
T  18736696 gacgaaacgacaacacctgtagatacgatattctacttat-actttattacttggtaaacgatttggtacacttgtctaa 18736774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 128 - 179
Target Start/End: Original strand, 21019625 - 21019675
Alignment:
Q  128 aacgacgatccctgtggatatgatactctacttatcactttattacttggta 179  Q
    |||||| |||| |||||||| |||||||||||||| ||||||||||||||||    
T  21019625 aacgacaatccttgtggataagatactctacttat-actttattacttggta 21019675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 140 - 187
Target Start/End: Original strand, 52517834 - 52517880
Alignment:
Q  140 tgtggatatgatactctacttatcactttattacttggtaacgatttg 187  Q
    |||||||| ||||||| |||||||||||||||||||| ||||||||||    
T  52517834 tgtggatacgatactc-acttatcactttattacttgataacgatttg 52517880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 176
Target Start/End: Original strand, 16229965 - 16230019
Alignment:
Q  122 ggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttg 176  Q
    |||| ||| ||| ||||||||||||| |||||||||||||  |||||||||||||    
T  16229965 ggacaaaaggacaatccctgtggatacgatactctacttactactttattacttg 16230019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 201
Target Start/End: Original strand, 31286037 - 31286117
Alignment:
Q  120 ttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aacgatttgatacacttgcctaa 201  Q
    ||||||||||| || ||||||||||||| |||| |||| ||| |||||||||||||||| || |||||| |||||||| ||||    
T  31286037 ttggacgaaac-acaatccctgtggatacgatattctagtta-cactttattacttggtaaatgatttggtacacttgtctaa 31286117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 5508528 - 5508484
Alignment:
Q  1 ttttctgcaaccaaaaacaggtaacttgctctatttcaaatagat 45  Q
    ||||||||||| ||||||| ||||||||||||||| |||| ||||    
T  5508528 ttttctgcaacaaaaaacatgtaacttgctctattgcaaacagat 5508484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 178
Target Start/End: Complemental strand, 8765217 - 8765137
Alignment:
Q  98 aaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt 178  Q
    |||| ||||||||| ||| || |  ||| ||| ||| |||| |||||||| |||||| ||||||||||||||||| |||||    
T  8765217 aaaactaagtaacaagaattgttcagacaaaaggacaatccatgtggatacgatactttacttatcactttattaattggt 8765137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 130
Target Start/End: Complemental strand, 17155928 - 17155860
Alignment:
Q  62 tctaacccttaactcttttattttatatcgtcaactaaaaataagtaacatgaagtgcttggacgaaac 130  Q
    |||||||| |||||||||| ||||||||||| ||   ||||||||||||||| | || ||| |||||||    
T  17155928 tctaacccgtaactctttttttttatatcgttaaactaaaataagtaacatggattgtttgaacgaaac 17155860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 173
Target Start/End: Original strand, 27413881 - 27413957
Alignment:
Q  98 aaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctactta-tcactttattac 173  Q
    |||||||||||||| ||| || |  | ||||| ||| |||||| |||||||||||||||||||| | ||||||||||    
T  27413881 aaaaataagtaacaagaattgttcagtcgaaaggacaatccctttggatatgatactctacttactaactttattac 27413957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 74; Significance: 4e-34; HSPs: 53)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 84 - 201
Target Start/End: Complemental strand, 23143838 - 23143718
Alignment:
Q  84 ttatatcgtcaactaa--aaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aa 180  Q
    |||||||||||||| |  |||||||||||||||| || |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| ||    
T  23143838 ttatatcgtcaacttacaaaataagtaacatgaattgtttggacgaaacgacaatccctgtggatatgatactctacttatcactttattaattggtaaa 23143739  T
Q  181 cgatttgatacacttgcctaa 201  Q
     |||||| |||||||||||||    
T  23143738 tgatttggtacacttgcctaa 23143718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 60 - 197
Target Start/End: Original strand, 12183291 - 12183430
Alignment:
Q  60 tctctaacccttaa-ctcttttattttatatcgtcaactaaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctac 158  Q
    ||||||||| |||| ||||||||||||||||||||| || |||||||||||| |||| || | |||||||| ||| |||| |||||||| |||||| |||    
T  12183291 tctctaacctttaaactcttttattttatatcgtcaccttaaaataagtaacgtgaattgttaggacgaaatgacaatccatgtggatacgatactgtac 12183390  T
Q  159 ttatcactttattacttggt-aacgatttgatacacttgc 197  Q
    |||||||||||||||||||| ||||||||| |||||||||    
T  12183391 ttatcactttattacttggtaaacgatttggtacacttgc 12183430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 62 - 201
Target Start/End: Complemental strand, 21907568 - 21907428
Alignment:
Q  62 tctaacccttaactcttttattttatatcgtcaactaaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctactta 161  Q
    ||||||||||| ||||||||||||||||| |||||| ||| ||||||||  ||  |  |||||||||||||| |||| |||||||| |||||| ||||||    
T  21907568 tctaacccttatctcttttattttatatcatcaacttaaattaagtaacgcgacttttttggacgaaacgacaatccttgtggatacgatactttactta 21907469  T
Q  162 tcactttattacttggt-aacgatttgatacacttgcctaa 201  Q
    ||||||||||||||||| ||||||||| || ||||||||||    
T  21907468 tcactttattacttggtaaacgatttggtatacttgcctaa 21907428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 60 - 201
Target Start/End: Complemental strand, 22567978 - 22567836
Alignment:
Q  60 tctctaacccttaactcttttattttatatcgtcaactaaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctact 159  Q
    ||||||||||||||| ||||||||||||||||| |||| |||||||||||| |||  || ||||||||||| || |||| ||||||||  ||||| ||||    
T  22567978 tctctaacccttaacccttttattttatatcgttaacttaaaataagtaacgtgagttgtttggacgaaaccacaatccatgtggatacaatactatact 22567879  T
Q  160 tatcactttattacttggt-aacgatttgatacacttgcctaa 201  Q
    | |||| |||||||||||| ||| ||||| |||||||||||||    
T  22567878 tttcacgttattacttggtaaacaatttggtacacttgcctaa 22567836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 62 - 201
Target Start/End: Complemental strand, 11177086 - 11176946
Alignment:
Q  62 tctaacccttaactcttttattttatatcgtcaactaaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctactta 161  Q
    ||||||||||| |||||||||||||||||||||| | ||||||||||||| ||| |  || || |||||||| | || |||||||| |||||||||||||    
T  11177086 tctaacccttatctcttttattttatatcgtcaatttaaaataagtaacacgaattatttcgaagaaacgacaacccatgtggatacgatactctactta 11176987  T
Q  162 tcactttattacttggt-aacgatttgatacacttgcctaa 201  Q
    |||||||| |||| ||| ||||||| | |||||||||||||    
T  11176986 tcactttagtactcggtaaacgattgggtacacttgcctaa 11176946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 60 - 172
Target Start/End: Original strand, 28933621 - 28933733
Alignment:
Q  60 tctctaacccttaactcttttattttatatcgtcaactaaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctact 159  Q
    ||||||||||||| ||||||||||||||||| |||||| |||||||| ||||  || || |||||||||||||  |||| |||||||| |||||||||||    
T  28933621 tctctaacccttatctcttttattttatatcatcaacttaaaataagcaacacaaattgtttggacgaaacgataatccttgtggatacgatactctact 28933720  T
Q  160 tatcactttatta 172  Q
    |||||||||||||    
T  28933721 tatcactttatta 28933733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 87 - 201
Target Start/End: Original strand, 21672423 - 21672538
Alignment:
Q  87 tatcgtcaactaaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aacgatt 185  Q
    |||||||||||||||| |||||||| ||| || |||||||||| ||  |||| |||||||| |||||||||||||||||||||||||||||| |||||||    
T  21672423 tatcgtcaactaaaaaaaagtaacacgaattgtttggacgaaaagataatccatgtggatacgatactctacttatcactttattacttggtaaacgatt 21672522  T
Q  186 tgatacacttgcctaa 201  Q
    || | |||||||||||    
T  21672523 tggtgcacttgcctaa 21672538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 87 - 201
Target Start/End: Original strand, 21679839 - 21679954
Alignment:
Q  87 tatcgtcaactaaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aacgatt 185  Q
    |||||||||||||||| |||||||| ||| || |||||||||| ||  |||| |||||||| ||||||||||||||||||||||||||| || |||||||    
T  21679839 tatcgtcaactaaaaaaaagtaacacgaattgtttggacgaaaagataatccatgtggatacgatactctacttatcactttattacttagtaaacgatt 21679938  T
Q  186 tgatacacttgcctaa 201  Q
    || | |||||||||||    
T  21679939 tggtgcacttgcctaa 21679954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 100 - 201
Target Start/End: Complemental strand, 9726120 - 9726018
Alignment:
Q  100 aaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aacgatttgatacacttgcc 198  Q
    |||||||||||   || || |||||||||||||| |||| |||||||| |||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  9726120 aaataagtaacgcaaattgtttggacgaaacgacaatccatgtggatacgatactctacttatcactttattacttggtaaacgatttggtacacttgcc 9726021  T
Q  199 taa 201  Q
    |||    
T  9726020 taa 9726018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 84 - 180
Target Start/End: Original strand, 22410311 - 22410408
Alignment:
Q  84 ttatatcgtcaact-aaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggtaa 180  Q
    |||||||||||||| ||||||||||||| |||| || ||| | |||||||| ||||||||||||| |||||||||||||||| |||||||||||||||    
T  22410311 ttatatcgtcaacttaaaaataagtaacgtgaattgtttgaatgaaacgacaatccctgtggatacgatactctacttatcattttattacttggtaa 22410408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 60 - 201
Target Start/End: Original strand, 27737651 - 27737792
Alignment:
Q  60 tctctaacccttaactcttttattttatatcgtcaact---aaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactct 156  Q
    |||||||||||||  ||||| |||||||  ||||||||   |||||||||||||  ||| || ||||||||||| || |||| ||||| |||||||||||    
T  27737651 tctctaaccctta--tctttcattttat--cgtcaacttacaaaaataagtaacgcgaattgtttggacgaaacaacaatccttgtgggtatgatactct 27737746  T
Q  157 acttatcactttattacttggt-aacgatttgatacacttgcctaa 201  Q
    |||||||||||||||||||||| ||||||||  |||||||||||||    
T  27737747 acttatcactttattacttggtaaacgatttagtacacttgcctaa 27737792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 82 - 196
Target Start/End: Complemental strand, 9516904 - 9516786
Alignment:
Q  82 ttttatatcgtcaact---aaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt 178  Q
    ||||||||||||||||   |||||||||||||  ||  || |||||||||||||| |||| |||||||| |||||||||||||||||||||||||| |||    
T  9516904 ttttatatcgtcaacttacaaaaataagtaacgcgagttgtttggacgaaacgacaatccatgtggatacgatactctacttatcactttattactaggt 9516805  T
Q  179 -aacgatttgatacacttg 196  Q
     ||||||||| ||||||||    
T  9516804 aaacgatttggtacacttg 9516786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 60 - 201
Target Start/End: Complemental strand, 8241413 - 8241273
Alignment:
Q  60 tctctaacccttaactcttttattttatatcgtcaactaaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctact 159  Q
    |||||||| |||||||||||||||||||||||| ||   |||||||||||  |||| || |||||| |||||   | || |||||||| |||||||||||    
T  8241413 tctctaactcttaactcttttattttatatcgtgaaactaaaataagtaatgtgaattgtttggacaaaacg--caaccttgtggatacgatactctact 8241316  T
Q  160 tatcactttattacttggt-aacgatttgatacacttgcctaa 201  Q
    ||||||||| |||||| || ||||||||| |||||||||||||    
T  8241315 tatcactttcttacttcgtaaacgatttggtacacttgcctaa 8241273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 82 - 195
Target Start/End: Original strand, 23844445 - 23844562
Alignment:
Q  82 ttttatatcgtcaact---aaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt 178  Q
    ||||||||||||||||   |||||||||||||  ||  || |||||||||||||| |||||| | ||||||||||||||||||||| |||||||||||||    
T  23844445 ttttatatcgtcaacttacaaaaataagtaacgcgagttgtttggacgaaacgacaatccctttagatatgatactctacttatcattttattacttggt 23844544  T
Q  179 -aacgatttgatacactt 195  Q
     ||||||||| |||||||    
T  23844545 aaacgatttggtacactt 23844562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 60 - 201
Target Start/End: Complemental strand, 4339873 - 4339731
Alignment:
Q  60 tctctaacccttaactcttttattttatatcgtcaactaaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctact 159  Q
    ||||||||||||| ||||||||||||||||||||||   |||||||||||   ||| || |||||| ||||||| |||  ||||||||  ||||||||||    
T  4339873 tctctaacccttatctcttttattttatatcgtcaaactaaaataagtaatgcgaattggttggacaaaacgacaatcattgtggatacaatactctact 4339774  T
Q  160 tatcactttattacttggt-aacgatttgatacacttgcctaa 201  Q
    ||||||||||||| ||| | ||| ||||| |||||||| ||||    
T  4339773 tatcactttattatttgataaacaatttggtacacttgtctaa 4339731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 60 - 201
Target Start/End: Original strand, 21688756 - 21688898
Alignment:
Q  60 tctctaacccttaactcttttattttatatcgtcaactaaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctact 159  Q
    |||||||||  |||||||||||||||||||| |||||| ||||||||||||  ||| |  ||||| | |||||| |||||| ||||||  ||||||||||    
T  21688756 tctctaacctctaactcttttattttatatcttcaactcaaaataagtaacgcgaattttttggatgtaacgacaatccctatggatacaatactctact 21688855  T
Q  160 tatcactttattacttggt-aacgatttgatacacttgcctaa 201  Q
    |||||||| ||||||| || ||||||| | ||||||| |||||    
T  21688856 tatcacttgattacttagtaaacgattgggtacactttcctaa 21688898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 60 - 201
Target Start/End: Complemental strand, 15466508 - 15466366
Alignment:
Q  60 tctctaacccttaactcttttatt-ttatatcgtcaactaaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctac 158  Q
    |||||||||||||||||||||||| ||||||||| ||   ||||||| ||||  ||| || || ||||||| ||| |||||| | |||| ||||||||||    
T  15466508 tctctaacccttaactcttttattattatatcgttaaaacaaaataactaacgcgaattgtttagacgaaatgacaatccctattgatacgatactctac 15466409  T
Q  159 ttatcactttattacttggt-aacgatttgatacacttgcctaa 201  Q
     || |||||||||||||||| ||||||||| |||||||||||||    
T  15466408 gta-cactttattacttggtaaacgatttggtacacttgcctaa 15466366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 120 - 201
Target Start/End: Complemental strand, 17729230 - 17729148
Alignment:
Q  120 ttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aacgatttgatacacttgcctaa 201  Q
    |||||||||||||| |||  |||||||| |||||||||||||||||||||||||||||| ||||||||| ||||||| |||||    
T  17729230 ttggacgaaacgacaatctttgtggatacgatactctacttatcactttattacttggtaaacgatttggtacacttacctaa 17729148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 120 - 192
Target Start/End: Original strand, 23645788 - 23645861
Alignment:
Q  120 ttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aacgatttgataca 192  Q
    |||||||||||||| |||||| |||||| |||||||||||||||||||||||||||||| ||||||||| ||||    
T  23645788 ttggacgaaacgacaatccctatggatacgatactctacttatcactttattacttggtaaacgatttggtaca 23645861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 101 - 201
Target Start/End: Original strand, 25927305 - 25927406
Alignment:
Q  101 aataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aacgatttgatacacttgcct 199  Q
    |||||||||| |||| || ||||||||||| |  |||| |||||||| |||| ||||||||||||||||||||||||| |||| |||| |||||||||||    
T  25927305 aataagtaacgtgaattgtttggacgaaactaaaatccatgtggatacgatattctacttatcactttattacttggtaaacgttttggtacacttgcct 25927404  T
Q  200 aa 201  Q
    ||    
T  25927405 aa 25927406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 100 - 180
Target Start/End: Original strand, 22566163 - 22566243
Alignment:
Q  100 aaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggtaa 180  Q
    |||||||||||  ||| ||||| |||||| |||| || | |||||||||||||||||||||||||||||||||||||||||    
T  22566163 aaataagtaacgcgaattgcttagacgaagcgacaattcttgtggatatgatactctacttatcactttattacttggtaa 22566243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 70 - 180
Target Start/End: Original strand, 18075360 - 18075469
Alignment:
Q  70 ttaactcttttattttatatcgtcaactaaaaataagtaacatga-agtgcttggacgaaacgacgatccctgtggatatgatactctacttatcacttt 168  Q
    ||||||||||||||||||   |||||||||||||||||||  | | | || |||||| ||||||| ||||  ||||||| |||||||| |||||||||||    
T  18075360 ttaactcttttattttatt--gtcaactaaaaataagtaaactcagattgtttggacaaaacgacaatccacgtggatacgatactctgcttatcacttt 18075457  T
Q  169 attacttggtaa 180  Q
    ||||||||||||    
T  18075458 attacttggtaa 18075469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 60 - 174
Target Start/End: Complemental strand, 9838494 - 9838380
Alignment:
Q  60 tctctaacccttaactcttttattttatatcgtcaactaaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctact 159  Q
    |||||||| ||| |||||||||||||||||||||||   ||||||||||||  ||  || ||  || ||| ||| |||| ||||||||  ||||||||||    
T  9838494 tctctaacgcttcactcttttattttatatcgtcaaactaaaataagtaacgcgagttgtttcaacaaaatgacaatccatgtggatacaatactctact 9838395  T
Q  160 tatcactttattact 174  Q
    |||||||||||||||    
T  9838394 tatcactttattact 9838380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 98 - 180
Target Start/End: Original strand, 23231982 - 23232064
Alignment:
Q  98 aaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggtaa 180  Q
    |||||||||||||  ||| || ||||||||| |||| || | | |||||||||||| ||||||||||||||||||||||||||    
T  23231982 aaaaataagtaacgcgaattgtttggacgaaccgacaattcttatggatatgataccctacttatcactttattacttggtaa 23232064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 20005900 - 20005977
Alignment:
Q  120 ttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aacgatttgatacacttg 196  Q
    |||||||||||||  |||| ||| |||| |||||||| ||||||||||||||||||||| ||||||||| ||||||||    
T  20005900 ttggacgaaacgaaaatccatgtagatacgatactctgcttatcactttattacttggtaaacgatttggtacacttg 20005977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 98 - 176
Target Start/End: Original strand, 24657454 - 24657532
Alignment:
Q  98 aaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttg 176  Q
    |||||||||||||| ||| || | ||||||||  || ||||||||||||| ||||||| |||||||| |||||||||||    
T  24657454 aaaaataagtaacaagaattgttcggacgaaaaaacaatccctgtggatacgatactcgacttatcattttattacttg 24657532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 149 - 201
Target Start/End: Complemental strand, 5624689 - 5624636
Alignment:
Q  149 gatactctacttatcactttattacttggt-aacgatttgatacacttgcctaa 201  Q
    |||||||||||||||||||||||||||||| ||||||||| |||| ||||||||    
T  5624689 gatactctacttatcactttattacttggtaaacgatttggtacatttgcctaa 5624636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 149 - 201
Target Start/End: Original strand, 14079494 - 14079547
Alignment:
Q  149 gatactctacttatcactttattacttggt-aacgatttgatacacttgcctaa 201  Q
    |||||||||||||||||||||| ||||||| ||||||||| |||||||||||||    
T  14079494 gatactctacttatcactttataacttggtaaacgatttggtacacttgcctaa 14079547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 100 - 192
Target Start/End: Original strand, 17299832 - 17299925
Alignment:
Q  100 aaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aacgatttgataca 192  Q
    |||||||||||   || || |||||| ||||||| |||||  || ||| |||||||||||||||||||||||||||||| ||||||||| ||||    
T  17299832 aaataagtaacgcaaattgtttggactaaacgacaatcccgatgaatacgatactctacttatcactttattacttggtaaacgatttgctaca 17299925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 175
Target Start/End: Original strand, 17827091 - 17827168
Alignment:
Q  98 aaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattactt 175  Q
    |||||||||||||  ||| || ||||| |||||||| |||| |||||||| ||||||||| |||| ||||||||||||    
T  17827091 aaaaataagtaacgcgaattgtttggaagaaacgacaatccatgtggatacgatactctatttataactttattactt 17827168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 149 - 201
Target Start/End: Original strand, 21932102 - 21932155
Alignment:
Q  149 gatactctacttatcactttattacttggt-aacgatttgatacacttgcctaa 201  Q
    |||||||||||||||||||||||||||||| ||| ||||| |||||||||||||    
T  21932102 gatactctacttatcactttattacttggtaaacaatttggtacacttgcctaa 21932155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 82 - 195
Target Start/End: Original strand, 27124473 - 27124589
Alignment:
Q  82 ttttatatcgtcaact--aaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt- 178  Q
    |||||||||||||| |  |||||||||||||  ||| || |||  ||||||||| |||| ||| |||| |||| | || ||||||||||||||||||||     
T  27124473 ttttatatcgtcaagttcaaaaataagtaacgagaattgtttgctcgaaacgacaatccatgtcgatacgataatataattatcactttattacttggta 27124572  T
Q  179 aacgatttgatacactt 195  Q
    ||||||||| |||||||    
T  27124573 aacgatttggtacactt 27124589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 120 - 180
Target Start/End: Complemental strand, 19244663 - 19244603
Alignment:
Q  120 ttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggtaa 180  Q
    |||||||||||||| ||| || | |||  ||||||||||||||||||||||||||||||||    
T  19244663 ttggacgaaacgacaatctctatagattcgatactctacttatcactttattacttggtaa 19244603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 150 - 201
Target Start/End: Original strand, 20145111 - 20145163
Alignment:
Q  150 atactctacttatcactttattacttggt-aacgatttgatacacttgcctaa 201  Q
    ||||||||||||||||||||||||||||| ||| ||||| |||||||||||||    
T  20145111 atactctacttatcactttattacttggtgaacaatttggtacacttgcctaa 20145163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 150 - 201
Target Start/End: Complemental strand, 22187728 - 22187676
Alignment:
Q  150 atactctacttatcactttattacttggt-aacgatttgatacacttgcctaa 201  Q
    ||||||||||||||||||||||||||||| ||| ||||| |||||||||||||    
T  22187728 atactctacttatcactttattacttggtgaacaatttggtacacttgcctaa 22187676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 126 - 201
Target Start/End: Original strand, 28586057 - 28586133
Alignment:
Q  126 gaaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aacgatttgatacacttgcctaa 201  Q
    |||||||| |||| ||| ||||||||||||||||||||| ||||||||| ||| ||||||||| || ||||| ||||    
T  28586057 gaaacgacaatccatgtcgatatgatactctacttatcaatttattactcggtaaacgatttggtatacttgtctaa 28586133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 201
Target Start/End: Original strand, 8039097 - 8039234
Alignment:
Q  60 tctctaacccttaactcttttatt----ttatatcgtcaactaaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactc 155  Q
    ||||||||||||||||||||||||    ||||||||||||   ||||||||||||| ||| || ||||| |||||||| |||       ||| |||||||    
T  8039097 tctctaacccttaactcttttattattattatatcgtcaa-acaaaataagtaacacgaattgtttggatgaaacgacaatc-------atacgatactc 8039188  T
Q  156 tacttatcactttattacttggt-aacgatttgatacacttgcctaa 201  Q
     ||||| |||||||||||||||| |||||||||  ||||||||||||    
T  8039189 cactta-cactttattacttggtaaacgatttggcacacttgcctaa 8039234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 144 - 201
Target Start/End: Original strand, 7543005 - 7543063
Alignment:
Q  144 gatatgatactctacttatcactttattacttggt-aacgatttgatacacttgcctaa 201  Q
    |||| |||||| ||||||||||||||||||||||| ||| |||||||||| ||||||||    
T  7543005 gatacgatactttacttatcactttattacttggtaaacaatttgatacatttgcctaa 7543063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 98 - 176
Target Start/End: Original strand, 22413048 - 22413126
Alignment:
Q  98 aaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttg 176  Q
    |||||||||||||| ||| || | ||||||||  || |||| ||| |||| |||||||||||||| |||||||||||||    
T  22413048 aaaaataagtaacaagaattgttcggacgaaagaacaatccatgtagatacgatactctacttataactttattacttg 22413126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 98 - 176
Target Start/End: Original strand, 23009394 - 23009471
Alignment:
Q  98 aaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttg 176  Q
    |||||||||||||| ||| |  ||||| |||| ||| ||||||||||||| ||| ||||||||||||||||| ||||||    
T  23009394 aaaaataagtaacaagaattt-ttggaagaaaggacaatccctgtggatacgatgctctacttatcactttaatacttg 23009471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 98 - 176
Target Start/End: Complemental strand, 23778970 - 23778893
Alignment:
Q  98 aaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttg 176  Q
    |||||||||||||| ||| |  ||||| |||| ||| ||||||||||||| ||| ||||||||||||||||| ||||||    
T  23778970 aaaaataagtaacaagaattt-ttggaagaaaggacaatccctgtggatacgatgctctacttatcactttaatacttg 23778893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 60 - 180
Target Start/End: Original strand, 6630653 - 6630771
Alignment:
Q  60 tctctaacccttaactcttttattttatatcgtcaactaaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctact 159  Q
    ||||||||| |||  ||||||||||||||| ||||||| ||||||||||||   |   | || ||||||||||| |||  |||||||  |||||||||||    
T  6630653 tctctaacctttatatcttttattttatattgtcaacttaaaataagtaacgcaagcggtttagacgaaacgacaatctatgtggatccgatactctact 6630752  T
Q  160 tatcactttattacttggtaa 180  Q
    ||| |  ||||||||||||||    
T  6630753 tatta--ttattacttggtaa 6630771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 201
Target Start/End: Original strand, 20722213 - 20722278
Alignment:
Q  135 atccctgtggatatgatactctacttatcactttattacttggt-aacgatttgatacacttgcctaa 201  Q
    |||| ||||||||| ||||||||||||  ||||||||||||||| ||||||||| |||| ||||||||    
T  20722213 atccttgtggatattatactctactta--actttattacttggtaaacgatttggtacatttgcctaa 20722278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 195
Target Start/End: Complemental strand, 26587670 - 26587622
Alignment:
Q  148 tgatactctacttatcactttattacttggta-acgatttgatacactt 195  Q
    |||||| ||||||||||||||||||| ||||| ||||||||||||||||    
T  26587670 tgataccctacttatcactttattacgtggtatacgatttgatacactt 26587622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 103 - 197
Target Start/End: Complemental strand, 24251611 - 24251516
Alignment:
Q  103 taagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aacgatttgatacacttgc 197  Q
    ||||||||  ||| || |||||| | ||||| | ||||||||||  ||| |||| ||||| ||||||||||||||| ||||| |||||||||||||    
T  24251611 taagtaacgcgaattgtttggacaagacgacaaaccctgtggatgcgatcctctgcttatgactttattacttggtaaacgaattgatacacttgc 24251516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 98 - 157
Target Start/End: Original strand, 24252228 - 24252287
Alignment:
Q  98 aaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactcta 157  Q
    |||||||||||||| ||| || |||||| ||||||| |||| |||||||| |||||||||    
T  24252228 aaaaataagtaacaagaattgtttggactaaacgacaatccatgtggatacgatactcta 24252287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 176
Target Start/End: Original strand, 21841687 - 21841765
Alignment:
Q  98 aaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttg 176  Q
    |||||||||||||| ||| || | |||||||| ||| |||| |||||||   | |||||||||||| ||||||||||||    
T  21841687 aaaaataagtaacaagaaatgttcggacgaaaggacaatccatgtggattcaaaactctacttatctctttattacttg 21841765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 127 - 180
Target Start/End: Complemental strand, 17382216 - 17382163
Alignment:
Q  127 aaacgacgatccctgtggatatgatactctacttatcactttattacttggtaa 180  Q
    ||||||| |||||||| |||| ||||||||||| |||||||||||  |||||||    
T  17382216 aaacgacaatccctgtagatacgatactctactcatcactttattcattggtaa 17382163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 201
Target Start/End: Complemental strand, 2586769 - 2586717
Alignment:
Q  150 atactctacttatcactttattacttggt-aacgatttgatacacttgcctaa 201  Q
    ||||| |||||||||||| |||||||||| ||| ||||| |||||||||||||    
T  2586769 atactatacttatcacttcattacttggtaaacaatttggtacacttgcctaa 2586717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 201
Target Start/End: Original strand, 9898958 - 9899062
Alignment:
Q  99 aaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttat-cactttattacttggt-aacgatttgatacacttg 196  Q
    |||||||||||| ||||  | ||| ||||||| || ||||| |||||||  ||||||||||| |  ||||||||||||||| ||| ||||| ||||||||    
T  9898958 aaaataagtaacgtgaatggtttgaacgaaacaacaatccccgtggatacaatactctacttttagactttattacttggtaaacaatttggtacacttg 9899057  T
Q  197 cctaa 201  Q
     ||||    
T  9899058 tctaa 9899062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 200
Target Start/End: Original strand, 20002440 - 20002484
Alignment:
Q  157 acttatcactttattacttggtaa-cgatttgatacacttgccta 200  Q
    ||||||||||||||||||||||||  |||||| ||||||||||||    
T  20002440 acttatcactttattacttggtaattgatttggtacacttgccta 20002484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 201
Target Start/End: Original strand, 28589457 - 28589533
Alignment:
Q  126 gaaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aacgatttgatacacttgcctaa 201  Q
    |||||||  |||| ||||| || |||||| ||||||||||||| ||| ||| | ||||||||| |||||||||||||    
T  28589457 gaaacgaaaatccatgtggctacgatactttacttatcactttgttatttgataaacgatttggtacacttgcctaa 28589533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 195
Target Start/End: Original strand, 34092327 - 34092363
Alignment:
Q  160 tatcactttattacttggt-aacgatttgatacactt 195  Q
    ||||||||||||||||||| |||||||||||||||||    
T  34092327 tatcactttattacttggtaaacgatttgatacactt 34092363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 68; Significance: 1e-30; HSPs: 54)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 63 - 201
Target Start/End: Complemental strand, 22664341 - 22664202
Alignment:
Q  63 ctaacccttaactcttttattttatatcgtcaactaaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttat 162  Q
    |||||||||| |||||||||||||||||||||||| |||||||| |||  ||  || || ||||||| ||  ||||| ||||||| ||||||||||||||    
T  22664341 ctaacccttatctcttttattttatatcgtcaacttaaaataagcaacgcgagttgtttagacgaaatgaaaatcccagtggataagatactctacttat 22664242  T
Q  163 cactttattacttggt-aacgatttgatacacttgcctaa 201  Q
    |||||||||||||||| ||||||||| |||| ||||||||    
T  22664241 cactttattacttggtaaacgatttggtacatttgcctaa 22664202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 60 - 201
Target Start/End: Complemental strand, 24281415 - 24281273
Alignment:
Q  60 tctctaacccttaactcttttattttatatcgtcaactaaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctact 159  Q
    |||||||||||| ||||||||||||||||| ||||||| ||||||||||||   || || | |||  ||||||  |||| ||||||||||||| ||||||    
T  24281415 tctctaaccctttactcttttattttatattgtcaacttaaaataagtaacgcaaattgttcggaaaaaacgataatccatgtggatatgataatctact 24281316  T
Q  160 tatcactttattacttggt-aacgatttgatacacttgcctaa 201  Q
    ||||||||||||||||||| ||||||||| |||| ||||||||    
T  24281315 tatcactttattacttggtaaacgatttggtacatttgcctaa 24281273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 64 - 198
Target Start/End: Original strand, 13345302 - 13345436
Alignment:
Q  64 taacccttaactcttttattttatatcgtcaa-ctaaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttat 162  Q
    ||||| ||||||||||||||||||  |||||| ||| |||||||||||  ||| || |||||| ||||||| |||| |||||||||||||||||||||||    
T  13345302 taacctttaactcttttattttat--cgtcaaactataaataagtaacgcgaattgtttggacaaaacgacaatccatgtggatatgatactctacttat 13345399  T
Q  163 cactttattacttggt-aacgatttgatacacttgcc 198  Q
    |||||||||||||||| ||| ||||| ||||||||||    
T  13345400 cactttattacttggtaaacaatttggtacacttgcc 13345436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 60 - 201
Target Start/End: Complemental strand, 147768 - 147627
Alignment:
Q  60 tctctaacccttaactcttttattttatatcgtcaactaaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctact 159  Q
    ||||||||||||| ||||||||||| |||||||||| | ||||||||||||  ||  || || ||||||| ||| |||| |||| ||||||||||| |||    
T  147768 tctctaacccttatctcttttattt-atatcgtcaaattaaaataagtaacgcgagctgtttagacgaaatgacaatccatgtgaatatgatactccact 147670  T
Q  160 tatcactttattacttg-gtaacgatttgatacacttgcctaa 201  Q
    ||||||||||||||||| | |||||||||||||||||| ||||    
T  147669 tatcactttattacttgtgaaacgatttgatacacttgtctaa 147627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 82 - 198
Target Start/End: Complemental strand, 12208720 - 12208600
Alignment:
Q  82 ttttatatcgtcaact---aaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt 178  Q
    ||||||||||||||||   |||||||||||||  ||| || |||||||||||||| |||| ||||||||||||| |||||||||||||||||||||||||    
T  12208720 ttttatatcgtcaacttacaaaaataagtaacgcgaattgtttggacgaaacgacaatccatgtggatatgatattctacttatcactttattacttggt 12208621  T
Q  179 -aacgatttgatacacttgcc 198  Q
     ||||||||  ||||||||||    
T  12208620 aaacgatttagtacacttgcc 12208600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 98 - 199
Target Start/End: Complemental strand, 21449189 - 21449087
Alignment:
Q  98 aaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aacgatttgatacacttg 196  Q
    ||||||||||||||| || || |||| ||||||||| |||| |||||||| |||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  21449189 aaaaataagtaacataaattgtttggccgaaacgacaatccttgtggatacgatactctacttatcactttattacttggtaaacgatttggtacacttg 21449090  T
Q  197 cct 199  Q
    |||    
T  21449089 cct 21449087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 82 - 198
Target Start/End: Original strand, 25405610 - 25405730
Alignment:
Q  82 ttttatatcgtcaact---aaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt 178  Q
    ||||||||||||||||   ||||||||||||| |||| || |||||||||||||| |||| |||||||| |||||| |||||||||||||||||||||||    
T  25405610 ttttatatcgtcaacttacaaaaataagtaacgtgaactgtttggacgaaacgacaatccttgtggatacgatactttacttatcactttattacttggt 25405709  T
Q  179 -aacgatttgatacacttgcc 198  Q
     ||||| ||| ||||||||||    
T  25405710 aaacgacttggtacacttgcc 25405730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 60 - 201
Target Start/End: Complemental strand, 17359297 - 17359158
Alignment:
Q  60 tctctaacccttaactcttttattttatatcgtcaac-taaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctac 158  Q
    |||||||||||||  |||||||||  ||||||||||| ||||||||||||||  ||| |  |||||||||||||| |||  | |||||||||||||| ||    
T  17359297 tctctaaccctta--tcttttatt--atatcgtcaacctaaaaataagtaacgagaattatttggacgaaacgacaatctttatggatatgatactcaac 17359202  T
Q  159 ttatcactttattacttggt-aacgatttgatacacttgcctaa 201  Q
    |||||||||||||||||||| ||||||||| |||||||||||||    
T  17359201 ttatcactttattacttggtaaacgatttggtacacttgcctaa 17359158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 98 - 196
Target Start/End: Original strand, 17610255 - 17610354
Alignment:
Q  98 aaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aacgatttgatacacttg 196  Q
    ||||||||||||| |||| || |||||||||||||| |||| |||||||| |||||||||||||| ||||||||||||||| ||||||||| ||||||||    
T  17610255 aaaaataagtaacgtgaattgtttggacgaaacgacaatccatgtggatacgatactctacttataactttattacttggtaaacgatttggtacacttg 17610354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 82 - 198
Target Start/End: Original strand, 15543946 - 15544066
Alignment:
Q  82 ttttatatcgtcaact---aaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt 178  Q
    |||||||||||||| |   |||||||||||||| ||| || |||||||||||||| ||  | ||||||| ||||||||||||||||||||||||||||||    
T  15543946 ttttatatcgtcaaattaaaaaaataagtaacacgaattgtttggacgaaacgacaatttccgtggatacgatactctacttatcactttattacttggt 15544045  T
Q  179 -aacgatttgatacacttgcc 198  Q
     ||||||||| ||||||||||    
T  15544046 aaacgatttggtacacttgcc 15544066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 60 - 193
Target Start/End: Complemental strand, 33190815 - 33190681
Alignment:
Q  60 tctctaacccttaactcttttattttatatcgtcaactaaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctact 159  Q
    ||||||| |||||||| ||||||||||||||||||||| ||||||||||||| ||  || || || |||||||| ||   ||||||||| ||||||||||    
T  33190815 tctctaaaccttaactattttattttatatcgtcaacttaaaataagtaacacgagttgtttagatgaaacgacaattgttgtggatattatactctact 33190716  T
Q  160 tatcactttattacttggt-aacgatttgatacac 193  Q
    ||||| ||||||||||| | ||||||||| |||||    
T  33190715 tatcattttattacttgataaacgatttggtacac 33190681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 82 - 198
Target Start/End: Complemental strand, 14779684 - 14779564
Alignment:
Q  82 ttttatatcgtcaact---aaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt 178  Q
    ||||||||||||||||   |||||||| ||||  ||  || |||||||||||||| ||||||||||||||||||||||| ||||||| ||||||||||||    
T  14779684 ttttatatcgtcaacttacaaaaataaataacgcgatatgtttggacgaaacgacaatccctgtggatatgatactctaattatcacattattacttggt 14779585  T
Q  179 -aacgatttgatacacttgcc 198  Q
     || |||||| ||||||||||    
T  14779584 aaatgatttggtacacttgcc 14779564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 71 - 194
Target Start/End: Complemental strand, 16179137 - 16179010
Alignment:
Q  71 taactcttttattttatatcgtcaact---aaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactt 167  Q
    |||| ||| ||||||||||||||||||   |||||||||||||| ||| || ||||||||||||||  ||| | |||||| |||||||||||||||| ||    
T  16179137 taacccttatattttatatcgtcaacttacaaaaataagtaacaagaattgtttggacgaaacgactttccttttggatacgatactctacttatcagtt 16179038  T
Q  168 tattacttggt-aacgatttgatacact 194  Q
    ||||||||| | ||||||||| ||||||    
T  16179037 tattacttgttaaacgatttggtacact 16179010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 82 - 178
Target Start/End: Original strand, 21666588 - 21666687
Alignment:
Q  82 ttttatatcgtcaact---aaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt 178  Q
    ||||||||||||||||   |||||||||||||  ||| || |||||||||| ||| |||| |||||||| ||||||||||||||||||||||||||||||    
T  21666588 ttttatatcgtcaacttataaaaataagtaacgagaattgtttggacgaaaggacaatccatgtggatacgatactctacttatcactttattacttggt 21666687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 65 - 180
Target Start/End: Complemental strand, 24214677 - 24214562
Alignment:
Q  65 aacccttaactcttttattttatatcgtcaactaaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatca 164  Q
    ||||||||| ||||||||||||||||||| ||| |||||||||||| | |  || || |||||||| || |||| ||||||||   |||| |||||||||    
T  24214677 aacccttaattcttttattttatatcgtccacttaaaataagtaacgtaagttgtttagacgaaacaacaatccatgtggatacagtactgtacttatca 24214578  T
Q  165 ctttattacttggtaa 180  Q
    ||||||||||||||||    
T  24214577 ctttattacttggtaa 24214562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 98 - 198
Target Start/End: Original strand, 18736239 - 18736340
Alignment:
Q  98 aaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aacgatttgatacacttg 196  Q
    |||||||||||||   || || ||| |||||||||| ||||||||||||| ||||| |||||||||||||||||||||| | ||||||||| ||||||||    
T  18736239 aaaaataagtaacggaaattgtttgaacgaaacgacaatccctgtggatacgatacactacttatcactttattacttgttaaacgatttggtacacttg 18736338  T
Q  197 cc 198  Q
    ||    
T  18736339 cc 18736340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 102 - 201
Target Start/End: Complemental strand, 21847729 - 21847630
Alignment:
Q  102 ataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aacgatttgatacacttgccta 200  Q
    ||||||||| |||| || |||||||||||||| |||| ||||||||  ||||||||||||  ||||||||||||||| ||||||||| ||||||||||||    
T  21847729 ataagtaacgtgaattgtttggacgaaacgacaatccatgtggatacaatactctactta-gactttattacttggtaaacgatttggtacacttgccta 21847631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 94 - 201
Target Start/End: Original strand, 23038007 - 23038114
Alignment:
Q  94 aactaaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aacgatttgataca 192  Q
    |||| ||||||||||||  ||  || || ||||||||||| |||| |||||||| ||||||| |||||||||||||||||||||| ||||||||| ||||    
T  23038007 aacttaaaataagtaacgagagttgttttgacgaaacgacaatccatgtggatacgatactc-acttatcactttattacttggtaaacgatttggtaca 23038105  T
Q  193 cttgcctaa 201  Q
    |||||||||    
T  23038106 cttgcctaa 23038114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 60 - 201
Target Start/End: Original strand, 9787840 - 9787982
Alignment:
Q  60 tctctaacccttaactcttttattttatatcgtcaactaaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctact 159  Q
    ||||||||||||  ||||| ||||||||||| | |||| |||||||||||   ||  || || ||||||||||| ||   | |||||| |||||||||||    
T  9787840 tctctaacccttttctcttctattttatatcataaacttaaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctact 9787939  T
Q  160 tatcactttattacttggt-aacgatttgatacacttgcctaa 201  Q
    ||||||||||||||||| | || |||||| |||||||||||||    
T  9787940 tatcactttattacttgctaaatgatttggtacacttgcctaa 9787982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 100 - 201
Target Start/End: Complemental strand, 17837615 - 17837513
Alignment:
Q  100 aaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aacgatttgatacacttgcc 198  Q
    |||||||||||  ||| || || ||| ||| ||| |||| ||||||||||||||||||||||| ||||||||||||||| ||| ||||| ||||||||||    
T  17837615 aaataagtaacgcgaattgtttagacaaaatgacaatccttgtggatatgatactctacttataactttattacttggtaaacaatttggtacacttgcc 17837516  T
Q  199 taa 201  Q
    |||    
T  17837515 taa 17837513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 82 - 198
Target Start/End: Complemental strand, 29242638 - 29242518
Alignment:
Q  82 ttttatatcgtcaact---aaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt 178  Q
    ||||||||||||||||   ||||||| |||||  ||| || ||||| |||||||| ||| || |||||| |||||||||||||||||||||||||||| |    
T  29242638 ttttatatcgtcaacttacaaaaatatgtaacgcgaattgtttggatgaaacgacaatcactatggatacgatactctacttatcactttattacttgat 29242539  T
Q  179 -aacgatttgatacacttgcc 198  Q
     ||| ||||| ||||||||||    
T  29242538 aaacaatttggtacacttgcc 29242518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 135 - 198
Target Start/End: Original strand, 24306341 - 24306405
Alignment:
Q  135 atccctgtggatatgatactctacttatcactttattacttggt-aacgatttgatacacttgcc 198  Q
    ||||||||||||| |||||||||||||||||||||||||||||| ||||| ||| ||||||||||    
T  24306341 atccctgtggatacgatactctacttatcactttattacttggtaaacgacttggtacacttgcc 24306405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 60 - 201
Target Start/End: Complemental strand, 22620400 - 22620258
Alignment:
Q  60 tctctaacccttaactcttttattttatatcgtcaactaaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctact 159  Q
    ||||||||||| ||||| |||||||||| |  |    |||||||||||||| |||| |  || ||||||| ||| || ||| |||||| ||||||||| |    
T  22620400 tctctaaccctcaactcctttattttattttattgtttaaaaataagtaacgtgaattatttagacgaaaagacaattcctatggatacgatactctagt 22620301  T
Q  160 tatcactttattacttggtaacg-atttgatacacttgcctaa 201  Q
    ||||||||||||||||  ||| | |||||||||||||||||||    
T  22620300 tatcactttattactttttaaagaatttgatacacttgcctaa 22620258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 98 - 198
Target Start/End: Original strand, 21987981 - 21988082
Alignment:
Q  98 aaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aacgatttgatacacttg 196  Q
    |||||||||||||  ||| || |||||||||| ||| ||| | | ||||| |||||||||||||||||||||||| ||||| || |||||| ||||||||    
T  21987981 aaaaataagtaacgcgaattgattggacgaaatgacaatctccgaggatacgatactctacttatcactttattatttggtaaaggatttggtacacttg 21988080  T
Q  197 cc 198  Q
    ||    
T  21988081 cc 21988082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 98 - 178
Target Start/End: Original strand, 16069550 - 16069630
Alignment:
Q  98 aaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt 178  Q
    |||||||||||||| ||| || |   |||||||||| ||||||||| |||||||| | |||||||||||||||||||||||    
T  16069550 aaaaataagtaacaagaattgttcaaacgaaacgacaatccctgtgtatatgatattttacttatcactttattacttggt 16069630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 70 - 173
Target Start/End: Original strand, 51473849 - 51473950
Alignment:
Q  70 ttaactcttttattttatatcgtcaactaaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcacttta 169  Q
    ||||||||||||||||||   ||| |||||||| |||||||   || || |||||| ||||||| |||| | |||||| |||||||||||||||||||||    
T  51473849 ttaactcttttattttatt--gtcgactaaaaacaagtaacgcaaattgtttggacaaaacgacaatccatatggatacgatactctacttatcacttta 51473946  T
Q  170 ttac 173  Q
    ||||    
T  51473947 ttac 51473950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 127 - 201
Target Start/End: Original strand, 12012828 - 12012903
Alignment:
Q  127 aaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aacgatttgatacacttgcctaa 201  Q
    ||||||| || | ||||||||  |||||||||||||||||||| |||||| | |||||||||||||||||||||||    
T  12012828 aaacgacaattcatgtggatacaatactctacttatcactttaatacttgataaacgatttgatacacttgcctaa 12012903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 135 - 201
Target Start/End: Complemental strand, 26540958 - 26540892
Alignment:
Q  135 atccctgtggatatgatactctacttatcactttattacttggtaa-cgatttgatacacttgcctaa 201  Q
    |||| |||||||| ||||||||||||| |||||||||||||||||| ||||||| |||||||||||||    
T  26540958 atccttgtggatacgatactctactta-cactttattacttggtaaacgatttggtacacttgcctaa 26540892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 60 - 111
Target Start/End: Complemental strand, 28008243 - 28008192
Alignment:
Q  60 tctctaacccttaactcttttattttatatcgtcaactaaaaataagtaaca 111  Q
    ||||||| |||| ||||||||||||||||||||||||| |||||||||||||    
T  28008243 tctctaatcctttactcttttattttatatcgtcaacttaaaataagtaaca 28008192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 120 - 201
Target Start/End: Original strand, 3591674 - 3591756
Alignment:
Q  120 ttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aacgatttgatacacttgcctaa 201  Q
    |||||| ||||||| |||  |||||||| ||||||||| |||||||||||||||||| | ||||||||  |||||||||||||    
T  3591674 ttggacaaaacgacaatctatgtggatacgatactctatttatcactttattacttgataaacgattttgtacacttgcctaa 3591756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 82 - 198
Target Start/End: Original strand, 21334699 - 21334819
Alignment:
Q  82 ttttatatcgtcaact---aaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt 178  Q
    ||||||||||||||||   |||||||||||||  ||| || ||||| |||| ||| || |||  ||||| |||||| ||||||||||||||||||||| |    
T  21334699 ttttatatcgtcaacttaaaaaaataagtaacgagaattgtttggaagaaatgacaattcctccggatacgatactatacttatcactttattacttgat 21334798  T
Q  179 -aacgatttgatacacttgcc 198  Q
     || ||||||||||| |||||    
T  21334799 aaatgatttgatacatttgcc 21334819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 120 - 178
Target Start/End: Complemental strand, 22622968 - 22622910
Alignment:
Q  120 ttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt 178  Q
    |||||||||| ||| ||||||  ||||||||||||||||| ||||||||||||||||||    
T  22622968 ttggacgaaaggacaatcccttaggatatgatactctactaatcactttattacttggt 22622910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 100 - 201
Target Start/End: Original strand, 24267783 - 24267885
Alignment:
Q  100 aaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aacgatttgatacacttgcc 198  Q
    ||||||||||| |||| || || |||||||| || |||  | ||||||||||||| ||||||||| ||||||||||| | || ||||||||||||||| |    
T  24267783 aaataagtaacgtgaattgattagacgaaacaacaatctatatggatatgatactatacttatcattttattacttgataaatgatttgatacacttgtc 24267882  T
Q  199 taa 201  Q
    |||    
T  24267883 taa 24267885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 84 - 180
Target Start/End: Original strand, 31236032 - 31236129
Alignment:
Q  84 ttatatcgtcaact-aaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggtaa 180  Q
    |||||||||||||| |||||||||||||  ||| |  |||||| ||||||| |||  ||| ||||| ||||||| |||||||||||||||||| ||||    
T  31236032 ttatatcgtcaacttaaaaataagtaacgcgaattatttggacaaaacgacaatctttgtagatataatactctgcttatcactttattacttagtaa 31236129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 149 - 201
Target Start/End: Original strand, 32383048 - 32383101
Alignment:
Q  149 gatactctacttatcactttattacttggt-aacgatttgatacacttgcctaa 201  Q
    ||||||||| |||||||||||||||||||| ||||||||| |||||||||||||    
T  32383048 gatactctatttatcactttattacttggtaaacgatttggtacacttgcctaa 32383101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 91 - 201
Target Start/End: Original strand, 15813516 - 15813628
Alignment:
Q  91 gtcaactaaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctac-ttatcactttattacttggt-aacgatttga 188  Q
    ||||||||||||||||||||| ||| || ||  | |||||||| |||| ||||||||  ||||||||| |||||||||||||  ||| | |||||||||     
T  15813516 gtcaactaaaaataagtaacacgaattgtttcaaagaaacgacaatccttgtggatacaatactctactttatcactttattttttgataaacgatttgg 15813615  T
Q  189 tacacttgcctaa 201  Q
    |||||||| ||||    
T  15813616 tacacttgtctaa 15813628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 98 - 201
Target Start/End: Original strand, 16787725 - 16787829
Alignment:
Q  98 aaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aacgatttgatacacttg 196  Q
    |||||||||||||   || || |||| | ||||||| |||  |||| ||| |||||||||||||||||||||||||||| | ||||||||||| | ||||    
T  16787725 aaaaataagtaacgcaaattgtttgggcaaaacgacaatctatgtgaatacgatactctacttatcactttattacttgataaacgatttgattcccttg 16787824  T
Q  197 cctaa 201  Q
    |||||    
T  16787825 cctaa 16787829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 97 - 176
Target Start/End: Original strand, 16916931 - 16917011
Alignment:
Q  97 taaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctactta-tcactttattacttg 176  Q
    ||||||||||||||  ||| || | |||||||| ||| ||||||||||||| ||||||||||||| | |||||||||||||    
T  16916931 taaaaataagtaacgagaattgttcggacgaaaggacaatccctgtggatacgatactctacttactaactttattacttg 16917011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 150 - 201
Target Start/End: Original strand, 27117769 - 27117821
Alignment:
Q  150 atactctacttatcactttattacttggt-aacgatttgatacacttgcctaa 201  Q
    ||||||||||||||||||||||||||||| ||||||||| || ||||||||||    
T  27117769 atactctacttatcactttattacttggtaaacgatttggtaaacttgcctaa 27117821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 120 - 180
Target Start/End: Complemental strand, 44795446 - 44795387
Alignment:
Q  120 ttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggtaa 180  Q
    |||||||||||||| |||| |||||||| ||||||| ||||||| ||||||||||||||||    
T  44795446 ttggacgaaacgacaatccatgtggatacgatactc-acttatctctttattacttggtaa 44795387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 201
Target Start/End: Original strand, 15813143 - 15813257
Alignment:
Q  87 tatcgtcaactaaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggtaa-cgatt 185  Q
    ||||||||| | ||||||||||||  ||  || ||||||| |||||  |||| |||||||| |||| || ||||||||||||||||| || ||| |||||    
T  15813143 tatcgtcaaattaaaataagtaacgagagttgtttggacgcaacgaaaatccttgtggatacgatagtc-acttatcactttattacatgataaacgatt 15813241  T
Q  186 tgatacacttgcctaa 201  Q
    || |||||||||||||    
T  15813242 tggtacacttgcctaa 15813257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 62 - 108
Target Start/End: Original strand, 18100976 - 18101022
Alignment:
Q  62 tctaacccttaactcttttattttatatcgtcaactaaaaataagta 108  Q
    ||||||||||||||||| |||||||||||||||| | ||||||||||    
T  18100976 tctaacccttaactcttctattttatatcgtcaaattaaaataagta 18101022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 120 - 201
Target Start/End: Original strand, 26648992 - 26649073
Alignment:
Q  120 ttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aacgatttgatacacttgcctaa 201  Q
    |||||||||||||  |||| ||||||||  ||| || |||||||| ||||||||||||| |||||||||||||||||| ||||    
T  26648992 ttggacgaaacgataatccatgtggatacaatattc-acttatcattttattacttggtaaacgatttgatacacttgtctaa 26649073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 176
Target Start/End: Complemental strand, 24054053 - 24054001
Alignment:
Q  123 gacgaaacgacgatccctgtggatatgatactctacttatcactttattacttg 176  Q
    ||||||| ||| ||||||||||||| |||||||||||||| |||||||||||||    
T  24054053 gacgaaaggacaatccctgtggata-gatactctacttattactttattacttg 24054001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 180
Target Start/End: Complemental strand, 9401605 - 9401526
Alignment:
Q  98 aaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggtaa 180  Q
    |||||||||||||  ||| || |||||||||||||| || | |||||||| ||||||||||||   |||||||||| ||||||    
T  9401605 aaaaataagtaacgcgaattgtttggacgaaacgacaattcatgtggatacgatactctactt---actttattacctggtaa 9401526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 201
Target Start/End: Original strand, 17121523 - 17121582
Alignment:
Q  142 tggatatgatactctacttatcactttattacttggt-aacgatttgatacacttgcctaa 201  Q
    |||||||||||||||||||| |||||||||||||| | ||| |||||||||||||| ||||    
T  17121523 tggatatgatactctactta-cactttattacttgataaacaatttgatacacttgtctaa 17121582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 178
Target Start/End: Complemental strand, 18830581 - 18830501
Alignment:
Q  98 aaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt 178  Q
    |||||||||||| | ||| || |||||||||| ||| ||||||||||||| |||| | ||  ||||||||| |||||||||    
T  18830581 aaaaataagtaaaaagaattgtttggacgaaaggacaatccctgtggatacgataatttaagtatcactttgttacttggt 18830501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 180
Target Start/End: Complemental strand, 34481027 - 34480987
Alignment:
Q  140 tgtggatatgatactctacttatcactttattacttggtaa 180  Q
    ||||||||| ||| |||||||||||||||||||||||||||    
T  34481027 tgtggatataatattctacttatcactttattacttggtaa 34480987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 140 - 198
Target Start/End: Complemental strand, 18825713 - 18825655
Alignment:
Q  140 tgtggatatgatactctacttatcactttattacttggt-aacgatttgatacacttgcc 198  Q
    |||||||| |||||| ||||||||||||||||||||||| ||||| ||| ||||||||||    
T  18825713 tgtggatacgatactttacttatcactttattacttggtcaacga-ttggtacacttgcc 18825655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 122 - 176
Target Start/End: Complemental strand, 23179874 - 23179819
Alignment:
Q  122 ggacgaaacgacgatccctgtggatatgatactctactta-tcactttattacttg 176  Q
    |||||||| ||| ||||||||||||||||||||||| ||| | |||||||||||||    
T  23179874 ggacgaaaggacaatccctgtggatatgatactctatttactaactttattacttg 23179819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 176
Target Start/End: Complemental strand, 727567 - 727489
Alignment:
Q  98 aaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttg 176  Q
    |||||||||||||| ||| || | ||||||||     |||| |||||||  ||||||||||||||||||||||||||||    
T  727567 aaaaataagtaacaagaattgttcggacgaaagagtaatccttgtggatgcgatactctacttatcactttattacttg 727489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 201
Target Start/End: Complemental strand, 25958178 - 25958105
Alignment:
Q  128 aacgacgatccctgtggatatgatactctacttatcactttattacttggt-aacgatttgatacacttgcctaa 201  Q
    |||||| |||| |||||||||||||||||| ||| ||||| ||||||| || |||||||| |||||||| |||||    
T  25958178 aacgacaatccatgtggatatgatactctattta-cacttcattactttgtaaacgatttaatacactttcctaa 25958105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 201
Target Start/End: Complemental strand, 33712702 - 33712660
Alignment:
Q  159 ttatcactttattacttggtaacgatttgatacacttgcctaa 201  Q
    |||||||||||||| ||||||| |||||| |||||||||||||    
T  33712702 ttatcactttattatttggtaaagatttggtacacttgcctaa 33712660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 172
Target Start/End: Original strand, 24306957 - 24307028
Alignment:
Q  100 aaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttatta 172  Q
    ||||||||||| |||| ||||| |  |||||||| |||||| || ||| ||||||||||||| ||||||||||    
T  24306957 aaataagtaacgtgaattgcttagttgaaacgacaatccctatgaatacgatactctactta-cactttatta 24307028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 65; Significance: 9e-29; HSPs: 2)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 60 - 176
Target Start/End: Original strand, 43188 - 43304
Alignment:
Q  60 tctctaacccttaactcttttattttatatcgtcaactaaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctact 159  Q
    ||||||||||||| |||||||||||||||||||||| | ||||||||||||| ||  || || ||||||||||| |||| |||||||| | |||| ||||    
T  43188 tctctaacccttatctcttttattttatatcgtcaatttaaaataagtaacacgagctgtttagacgaaacgacaatccttgtggatacgttactttact 43287  T
Q  160 tatcactttattacttg 176  Q
    |||||||||||||||||    
T  43288 tatcactttattacttg 43304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 43132 - 43176
Alignment:
Q  1 ttttctgcaaccaaaaacaggtaacttgctctatttcaaatagat 45  Q
    ||||||| |||||||||||||||||||||||| || |||| ||||    
T  43132 ttttctgtaaccaaaaacaggtaacttgctctgttgcaaacagat 43176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 60; Significance: 8e-26; HSPs: 3)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 60 - 201
Target Start/End: Complemental strand, 54999 - 54856
Alignment:
Q  60 tctctaacccttaactcttttattttatatcgtcaactaaaaataagtaacatgaagtgcttggacgaaa-cgacgatccctgtggatatgatactctac 158  Q
    ||||||||||||| || |||||||||||||||| |||| ||||||||||||   |  |  || ||||||| |||| |||||||||||||  |||||||||    
T  54999 tctctaacccttatcttttttattttatatcgttaacttaaaataagtaacgcaagctatttagacgaaaacgacaatccctgtggatacaatactctac 54900  T
Q  159 ttatcactttattacttggt-aacgatttgatacacttgcctaa 201  Q
    |||||||||||||||||||| ||||||||| ||||||| |||||    
T  54899 ttatcactttattacttggtaaacgatttggtacactttcctaa 54856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 144 - 198
Target Start/End: Original strand, 48235 - 48290
Alignment:
Q  144 gatatgatactctacttatcactttattacttggt-aacgatttgatacacttgcc 198  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||| |||||    
T  48235 gatacgatactctacttatcactttattacttggtaaacgatttgatacatttgcc 48290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 98 - 177
Target Start/End: Complemental strand, 234441 - 234362
Alignment:
Q  98 aaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttgg 177  Q
    |||||||||| ||| ||| || | |||||||| ||| ||| |||||| || |||||| ||||||||||||||||||||||    
T  234441 aaaaataagtgacaagaattgttcggacgaaaggacaatctctgtgggtacgatactatacttatcactttattacttgg 234362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0638 (Bit Score: 55; Significance: 8e-23; HSPs: 1)
Name: scaffold0638
Description:

Target: scaffold0638; HSP #1
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 97 - 195
Target Start/End: Original strand, 821 - 919
Alignment:
Q  97 taaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggtaacgatttgatacactt 195  Q
    |||||||||||||| || | || |||||||||||||| ||| |  |||||| ||||||||||||||||||||||||||||||||||||||  |||||||    
T  821 taaaaataagtaacgtggattgtttggacgaaacgacaatctcaatggatacgatactctacttatcactttattacttggtaacgatttagtacactt 919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0838 (Bit Score: 50; Significance: 8e-20; HSPs: 1)
Name: scaffold0838
Description:

Target: scaffold0838; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 60 - 196
Target Start/End: Complemental strand, 2508 - 2371
Alignment:
Q  60 tctctaacccttaactcttttattttatatcgtcaactaaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctact 159  Q
    |||||||||||| |||||||||||||| || ||||| | ||||||| ||||   || || ||||| |||| | | |||| |||||||| |||||||||||    
T  2508 tctctaacccttcactcttttattttaaattgtcaaatcaaaataattaacgctaattgtttggaagaaatgtcaatccatgtggatacgatactctact 2409  T
Q  160 tatcactttattacttggt-aacgatttgatacacttg 196  Q
    |||| |||||||| ||||| ||||||||| ||||||||    
T  2408 tatccctttattatttggtaaacgatttggtacacttg 2371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0832 (Bit Score: 50; Significance: 8e-20; HSPs: 1)
Name: scaffold0832
Description:

Target: scaffold0832; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 60 - 196
Target Start/End: Complemental strand, 2539 - 2402
Alignment:
Q  60 tctctaacccttaactcttttattttatatcgtcaactaaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctact 159  Q
    |||||||||||| |||||||||||||| || ||||| | ||||||| ||||   || || ||||| |||| | | |||| |||||||| |||||||||||    
T  2539 tctctaacccttcactcttttattttaaattgtcaaatcaaaataattaacgctaattgtttggaagaaatgtcaatccatgtggatacgatactctact 2440  T
Q  160 tatcactttattacttggt-aacgatttgatacacttg 196  Q
    |||| |||||||| ||||| ||||||||| ||||||||    
T  2439 tatccctttattatttggtaaacgatttggtacacttg 2402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 50; Significance: 8e-20; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 98 - 175
Target Start/End: Complemental strand, 21376 - 21299
Alignment:
Q  98 aaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattactt 175  Q
    ||||||| |||||| ||| || | |||||||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  21376 aaaaatatgtaacaagaattgttcggacgaaaggacaatccctgtggatatgatactctacttatcactttattactt 21299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 98 - 178
Target Start/End: Complemental strand, 3631 - 3551
Alignment:
Q  98 aaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt 178  Q
    |||||||||||||| ||| || | |||||||| ||| |||| |||||||| ||||||||||||||||||||||||||||||    
T  3631 aaaaataagtaacaagaattgttcggacgaaaggacaatccatgtggatacgatactctacttatcactttattacttggt 3551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0427 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0427
Description:

Target: scaffold0427; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 60 - 162
Target Start/End: Original strand, 2778 - 2881
Alignment:
Q  60 tctctaacccttaactcttttatt-ttatatcgtcaactaaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctac 158  Q
    |||||||||||||||||||||||| |||||| |||||   ||||||||||||| ||| || |||||||||||||| || | |||||||| ||||||| ||    
T  2778 tctctaacccttaactcttttattattatattgtcaaaacaaaataagtaacacgaattgtttggacgaaacgacaattcatgtggatacgatactcaac 2877  T
Q  159 ttat 162  Q
    ||||    
T  2878 ttat 2881  T

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Target: scaffold0155 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 60 - 180
Target Start/End: Original strand, 35956 - 36076
Alignment:
Q  60 tctctaaccctt-aactcttttattttatatcgtcaa-ctaaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactcta 157  Q
    |||||||||||| ||||||| ||||||||  |||||| || ||||||||||||| ||| |  ||||| |||||||| || | |||||||| |||||||||    
T  35956 tctctaaccctttaactcttatattttat--cgtcaaacttaaaataagtaacacgaattatttggatgaaacgacaattcatgtggatacgatactcta 36053  T
Q  158 cttatcactttattacttggtaa 180  Q
    |||||||||||||||||| ||||    
T  36054 cttatcactttattacttagtaa 36076  T

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Target: scaffold0650 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 120 - 201
Target Start/End: Complemental strand, 6365 - 6283
Alignment:
Q  120 ttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aacgatttgatacacttgcctaa 201  Q
    ||||||||||| || |||| |||||||| |||||| ||||||| |||||||||||| || |||||||||||||||||||||||    
T  6365 ttggacgaaacaacaatccatgtggatacgatactttacttatgactttattacttcgtaaacgatttgatacacttgcctaa 6283  T

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Target: scaffold0035 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 98 - 199
Target Start/End: Complemental strand, 70013 - 69911
Alignment:
Q  98 aaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aacgatttgatacacttg 196  Q
    |||||||||||||  ||| || |||||||||||||| |||| |||| ||| |||||| ||||| ||||||||||||||||| || |||||| ||||||||    
T  70013 aaaaataagtaacgagaattgtttggacgaaacgacaatccttgtgtatacgatactttacttgtcactttattacttggtaaatgatttggtacacttg 69914  T
Q  197 cct 199  Q
    |||    
T  69913 cct 69911  T

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Target: scaffold0024 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 60 - 180
Target Start/End: Complemental strand, 39723 - 39602
Alignment:
Q  60 tctctaacccttaactcttttattttatatcgtcaactaaaaataagtaacatga-agtgcttggacgaaacgacgatccctgtggatatgatactctac 158  Q
    |||||||  |||| |||||||||||||||||||||||| |||||||||||  |||   |  |||||| |||| || |||  |||||||| ||| ||||||    
T  39723 tctctaattcttatctcttttattttatatcgtcaacttaaaataagtaaagtgagtttttttggacaaaacaacaatcaatgtggatacgatgctctac 39624  T
Q  159 ttatcactttattacttggtaa 180  Q
    ||||||||||||||||||||||    
T  39623 ttatcactttattacttggtaa 39602  T

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Target: scaffold0043 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 123 - 201
Target Start/End: Original strand, 89878 - 89956
Alignment:
Q  123 gacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aacgatttgatacacttgcctaa 201  Q
    ||||||||||| || | ||| |||||||||||||||||| |||||||||||||||| |||||||||||||||||| ||||    
T  89878 gacgaaacgacaatacttgtagatatgatactctactta-cactttattacttggtaaacgatttgatacacttgtctaa 89956  T

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Target: scaffold1869 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold1869
Description:

Target: scaffold1869; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 120 - 197
Target Start/End: Original strand, 410 - 488
Alignment:
Q  120 ttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aacgatttgatacacttgc 197  Q
    |||||||||| ||| |||||||| |||| |||||||||| |||||||||||||||| || |||||| ||||||||||||    
T  410 ttggacgaaatgacaatccctgttgatacgatactctacgtatcactttattactttgtaaacgatatgatacacttgc 488  T

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Target: scaffold0136 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 128 - 201
Target Start/End: Original strand, 15494 - 15568
Alignment:
Q  128 aacgacgatccctgtggatatgatactctacttatcactttattacttggt-aacgatttgatacacttgcctaa 201  Q
    |||||| |||| |||||||| |||||||||| ||| ||||||||||||||| || ||||||||||||||||||||    
T  15494 aacgacaatccatgtggatacgatactctacatattactttattacttggtaaatgatttgatacacttgcctaa 15568  T

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Target: scaffold0001 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 135 - 201
Target Start/End: Complemental strand, 69144 - 69078
Alignment:
Q  135 atccctgtggatatgatactctacttatcactttattacttggtaacgatttgatacacttgcctaa 201  Q
    |||| |||||||| ||| ||| |||||||||||||||||||||||| |||||| |||||||||||||    
T  69144 atccttgtggatacgattctcaacttatcactttattacttggtaatgatttggtacacttgcctaa 69078  T

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Target: scaffold0102 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 60 - 197
Target Start/End: Complemental strand, 35675 - 35537
Alignment:
Q  60 tctctaaccctt-aactcttttattttatatcgtcaa-ctaaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactcta 157  Q
    |||||||||||| ||||||||||||||||  | |||| || |||||||||||   ||| || |||||||||||||  |||| ||||||||  ||||||||    
T  35675 tctctaaccctttaactcttttattttat--catcaaacttaaaataagtaaggcgaattgtttggacgaaacgaaaatccatgtggatacaatactcta 35578  T
Q  158 cttatcactttattacttggt-aacgatttgatacacttgc 197  Q
     |||||||||||||||||| | ||||||| |||||| ||||    
T  35577 tttatcactttattacttgataaacgattagatacatttgc 35537  T

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Target: scaffold0034 (Bit Score: 40; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 98 - 176
Target Start/End: Complemental strand, 76518 - 76439
Alignment:
Q  98 aaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctactta-tcactttattacttg 176  Q
    |||||||||||||| ||| || | ||||||||  || ||||||||||||||||||||||||||| | |||||||||||||    
T  76518 aaaaataagtaacaagaattgttcggacgaaagaacaatccctgtggatatgatactctacttactaactttattacttg 76439  T

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Target: scaffold0672 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0672
Description:

Target: scaffold0672; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 180
Target Start/End: Complemental strand, 1805 - 1752
Alignment:
Q  127 aaacgacgatccctgtggatatgatactctacttatcactttattacttggtaa 180  Q
    ||||||| || |||||||||| |||||||||||||||||||| |||||||||||    
T  1805 aaacgacaattcctgtggatacgatactctacttatcacttttttacttggtaa 1752  T

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Target: scaffold0957 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0957
Description:

Target: scaffold0957; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 201
Target Start/End: Complemental strand, 3230 - 3149
Alignment:
Q  120 ttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aacgatttgatacacttgcctaa 201  Q
    ||||| |||| ||| |||| |||||||| |||||||||| || |||||||||||||||| ||| ||||  |||||||||||||    
T  3230 ttggatgaaatgacaatccgtgtggatacgatactctacata-cactttattacttggtaaacaattttgtacacttgcctaa 3149  T

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Target: scaffold0653 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0653
Description:

Target: scaffold0653; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 100 - 201
Target Start/End: Original strand, 4484 - 4586
Alignment:
Q  100 aaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aacgatttgatacacttgcc 198  Q
    |||||||||||| ||| || ||  |||||| ||| |||| |||||||| |||||||| |||| || ||| ||||||||| ||||||| | |||| |||||    
T  4484 aaataagtaacacgaattgtttaaacgaaatgacaatccatgtggatacgatactctgcttaccatttttttacttggtaaacgattaggtacagttgcc 4583  T
Q  199 taa 201  Q
    |||    
T  4584 taa 4586  T

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Target: scaffold0054 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 195
Target Start/End: Complemental strand, 72120 - 72074
Alignment:
Q  150 atactctacttatcactttattacttgg-taacgatttgatacactt 195  Q
    |||||||||||||||||||||||||||| |||| ||||| |||||||    
T  72120 atactctacttatcactttattacttggttaacaatttggtacactt 72074  T

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Target: scaffold0042 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 195
Target Start/End: Complemental strand, 30027 - 29909
Alignment:
Q  76 cttttatt-ttatatcgtcaactaaaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattact 174  Q
    |||||||| ||||||||||||  ||||||||||||| | || || |||   || ||||| ||| || ||||||  |||||||||||| ||||||||||||    
T  30027 cttttattgttatatcgtcaa--aaaaataagtaacgtaaattgtttgacagatacgacaatctctatggataccatactctactta-cactttattact 29931  T
Q  175 tggt-aacgatttgatacactt 195  Q
    |||| ||||||||| |||||||    
T  29930 tggtaaacgatttggtacactt 29909  T

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Target: scaffold0019 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 172
Target Start/End: Complemental strand, 11312 - 11266
Alignment:
Q  126 gaaacgacgatccctgtggatatgatactctacttatcactttatta 172  Q
    ||||| || |||| ||| |||||||||||||||||||||||||||||    
T  11312 gaaacaacaatccatgtagatatgatactctacttatcactttatta 11266  T

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Target: scaffold0019; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 196
Target Start/End: Original strand, 181706 - 181803
Alignment:
Q  99 aaaataagtaacatgaagtgcttggacgaaacgacgatccctgtggatatgatactctacttatcactttattacttggtaa-cgatttgatacacttg 196  Q
    ||||||||||||| ||  |  |||||| ||||||| |||  |||||||| ||||||| | ||||||||||||||||||||||  |||||| ||||||||    
T  181706 aaaataagtaacacgacttatttggacaaaacgacaatctatgtggatacgatactc-atttatcactttattacttggtaattgatttggtacacttg 181803  T

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Target: scaffold0620 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0620
Description:

Target: scaffold0620; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 195
Target Start/End: Original strand, 7661 - 7697
Alignment:
Q  160 tatcactttattacttggt-aacgatttgatacactt 195  Q
    ||||||||||||||||||| |||||||||||||||||    
T  7661 tatcactttattacttggtaaacgatttgatacactt 7697  T

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Target: scaffold0394 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 201
Target Start/End: Original strand, 13963 - 14010
Alignment:
Q  154 tctacttatcactttattacttggtaa-cgatttgatacacttgcctaa 201  Q
    |||||||| ||||| |||||||||||| |||||||||||||||||||||    
T  13963 tctactta-cacttaattacttggtaaacgatttgatacacttgcctaa 14010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0263 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0263
Description:

Target: scaffold0263; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 15840 - 15800
Alignment:
Q  1 ttttctgcaaccaaaaacaggtaacttgctctatttcaaat 41  Q
    ||||| |||||||||||||||||||||||||| || |||||    
T  15840 ttttccgcaaccaaaaacaggtaacttgctctgttgcaaat 15800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 201
Target Start/End: Complemental strand, 78666 - 78590
Alignment:
Q  126 gaaacgacgatccctgtggatatgatactctacttatcactttattacttggt-aacgatttgatacacttgcctaa 201  Q
    |||||||| |||| | |||||| ||| ||  |||||||| ||||||||||||| |||||| || |||||||||||||    
T  78666 gaaacgacaatccttatggatacgatgcttaacttatcagtttattacttggtaaacgatatggtacacttgcctaa 78590  T

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