View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20395_low_5 (Length: 416)
Name: NF20395_low_5
Description: NF20395
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20395_low_5 |
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Alignment Details
Target: chr8 (Bit Score: 370; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 370; E-Value: 0
Query Start/End: Original strand, 10 - 402
Target Start/End: Original strand, 12507205 - 12507595
Alignment:
| Q |
10 |
attattctctcaaatgctcaatagatccaaaaagacaccacgtgctataaagagcctaaagtgaaatgataataacatagttgcaaaaaataaataaata |
109 |
Q |
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| T |
12507205 |
attattctctcaaatgctcaatagatccaaaaatacaccacgtgctataaagagcctaaagtgaaatgataataacatagttgcaaaaaataaataaata |
12507304 |
T |
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| Q |
110 |
aagatattaattatgctctttaagtaaaaagtattgccaatatattttcattccaaagatgtttaattacaatcacaaatatactttggcatatctatct |
209 |
Q |
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| T |
12507305 |
aaaatattaattatgctctttaagtaaaaagtattgccaatatattttcattccaaagatgtttaattacaatcacaaatatactttggcatatctatct |
12507404 |
T |
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| Q |
210 |
atataatttgcagcaactcaaattaacatagttgcatccaagactttacatataaaatcgatttgaaaagagagttcatttttcagccaaattttcattt |
309 |
Q |
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| T |
12507405 |
atataatttgcagcaactcaaattaacatagttgcatccaagactttacatataaaatcgatttgaaatgagagttcatttttcagccaaattttcattt |
12507504 |
T |
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| Q |
310 |
atcattaatttcatattctttggcataattaaactaaacacttttctcatataaaactaaagttttgttctgtatgtacatacatgctataag |
402 |
Q |
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| T |
12507505 |
atcattaatttcatattctttggcataattaaactaa--acttttctcatataaaactaaagttttgttctgtatgtacatacatgctataag |
12507595 |
T |
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