View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20396_high_8 (Length: 250)

Name: NF20396_high_8
Description: NF20396
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20396_high_8
NF20396_high_8
[»] chr7 (29 HSPs)
chr7 (10-237)||(25886192-25886419)
chr7 (19-106)||(35496561-35496648)
chr7 (10-106)||(28663127-28663223)
chr7 (13-106)||(27123299-27123392)
chr7 (10-103)||(39320973-39321066)
chr7 (21-105)||(40753936-40754019)
chr7 (12-106)||(35731311-35731405)
chr7 (10-103)||(28770499-28770592)
chr7 (10-106)||(21727394-21727490)
chr7 (8-106)||(43224075-43224173)
chr7 (34-103)||(9718985-9719054)
chr7 (10-106)||(42936029-42936123)
chr7 (10-106)||(44537363-44537459)
chr7 (10-106)||(37158343-37158440)
chr7 (12-103)||(7653600-7653691)
chr7 (12-103)||(10200593-10200683)
chr7 (41-100)||(48488172-48488231)
chr7 (10-72)||(44592888-44592950)
chr7 (10-106)||(43234812-43234908)
chr7 (10-76)||(3692899-3692965)
chr7 (10-80)||(27337719-27337789)
chr7 (22-71)||(18801074-18801123)
chr7 (14-103)||(29711484-29711573)
chr7 (44-108)||(26239527-26239591)
chr7 (37-100)||(34398071-34398132)
chr7 (10-103)||(35923498-35923587)
chr7 (37-71)||(18926376-18926410)
chr7 (25-106)||(14651378-14651459)
chr7 (23-103)||(34117862-34117942)
[»] chr3 (19 HSPs)
chr3 (21-105)||(26900012-26900096)
chr3 (12-106)||(41309839-41309936)
chr3 (10-102)||(29083891-29083984)
chr3 (10-98)||(16662999-16663086)
chr3 (10-70)||(26143092-26143152)
chr3 (12-80)||(42939856-42939924)
chr3 (10-87)||(42846012-42846090)
chr3 (10-103)||(48180162-48180255)
chr3 (19-103)||(24791527-24791614)
chr3 (10-107)||(39551843-39551939)
chr3 (10-97)||(40673456-40673543)
chr3 (10-75)||(22730505-22730570)
chr3 (10-83)||(49362365-49362438)
chr3 (10-103)||(51351299-51351392)
chr3 (9-80)||(47638916-47638987)
chr3 (37-97)||(24313600-24313660)
chr3 (54-103)||(26143164-26143213)
chr3 (10-103)||(39924620-39924712)
chr3 (34-102)||(48811361-48811428)
[»] chr5 (20 HSPs)
chr5 (10-99)||(3140836-3140925)
chr5 (10-102)||(8208201-8208293)
chr5 (10-103)||(15720089-15720182)
chr5 (19-104)||(30104835-30104920)
chr5 (10-107)||(34899123-34899220)
chr5 (10-102)||(17692284-17692376)
chr5 (10-106)||(30501128-30501224)
chr5 (10-106)||(30541471-30541567)
chr5 (10-100)||(8221144-8221234)
chr5 (10-103)||(7719226-7719319)
chr5 (10-111)||(9276563-9276664)
chr5 (10-103)||(18229593-18229686)
chr5 (44-106)||(7968446-7968508)
chr5 (10-103)||(112477-112570)
chr5 (10-103)||(16667283-16667376)
chr5 (21-128)||(2918562-2918670)
chr5 (14-98)||(14043407-14043491)
chr5 (37-129)||(42877293-42877384)
chr5 (31-103)||(13480062-13480134)
chr5 (22-101)||(18963846-18963926)
[»] chr4 (37 HSPs)
chr4 (10-106)||(7852532-7852628)
chr4 (22-106)||(24175387-24175471)
chr4 (21-103)||(7444376-7444458)
chr4 (10-103)||(51834936-51835029)
chr4 (10-106)||(45900137-45900233)
chr4 (19-106)||(8261139-8261226)
chr4 (19-106)||(8274556-8274643)
chr4 (10-100)||(35777693-35777783)
chr4 (10-98)||(31429299-31429387)
chr4 (10-102)||(50341859-50341951)
chr4 (21-80)||(39195741-39195800)
chr4 (10-105)||(50427011-50427106)
chr4 (34-103)||(13585252-13585321)
chr4 (10-103)||(24229637-24229730)
chr4 (9-89)||(27953046-27953126)
chr4 (19-103)||(31690413-31690497)
chr4 (10-102)||(34391699-34391791)
chr4 (10-101)||(47995730-47995821)
chr4 (10-100)||(31174645-31174735)
chr4 (10-104)||(41462071-41462165)
chr4 (10-106)||(25115251-25115347)
chr4 (10-86)||(49084408-49084485)
chr4 (22-86)||(14031347-14031411)
chr4 (10-102)||(49400634-49400726)
chr4 (19-103)||(36702815-36702895)
chr4 (10-67)||(51736376-51736433)
chr4 (12-71)||(37138185-37138244)
chr4 (10-103)||(37440848-37440941)
chr4 (56-103)||(24396254-24396301)
chr4 (21-103)||(37060581-37060664)
chr4 (31-97)||(53014203-53014269)
chr4 (12-101)||(14948981-14949069)
chr4 (37-106)||(34469556-34469624)
chr4 (10-106)||(12618683-12618778)
chr4 (10-102)||(20394660-20394750)
chr4 (12-80)||(48315948-48316015)
chr4 (19-102)||(48337587-48337671)
[»] chr8 (24 HSPs)
chr8 (21-104)||(42636356-42636439)
chr8 (10-104)||(1135183-1135277)
chr8 (10-119)||(27801201-27801310)
chr8 (10-103)||(1369850-1369943)
chr8 (10-119)||(4384111-4384219)
chr8 (10-100)||(2258085-2258175)
chr8 (10-106)||(33013067-33013163)
chr8 (13-103)||(28207649-28207740)
chr8 (10-80)||(167858-167928)
chr8 (10-98)||(24695769-24695856)
chr8 (19-103)||(33949541-33949625)
chr8 (10-98)||(35901953-35902041)
chr8 (21-103)||(9735295-9735377)
chr8 (31-91)||(36355960-36356020)
chr8 (19-103)||(45197408-45197492)
chr8 (32-103)||(884461-884531)
chr8 (32-103)||(37427235-37427306)
chr8 (21-71)||(37813425-37813475)
chr8 (10-75)||(5588982-5589047)
chr8 (42-98)||(26745159-26745214)
chr8 (19-89)||(33067533-33067603)
chr8 (10-76)||(39691132-39691198)
chr8 (22-91)||(12954762-12954831)
chr8 (10-98)||(12829867-12829955)
[»] chr2 (20 HSPs)
chr2 (10-100)||(19890183-19890273)
chr2 (10-107)||(9448941-9449037)
chr2 (10-88)||(7673216-7673294)
chr2 (10-108)||(19514893-19514991)
chr2 (10-106)||(31017296-31017392)
chr2 (10-104)||(1334874-1334968)
chr2 (10-98)||(31452343-31452430)
chr2 (10-105)||(15505566-15505661)
chr2 (10-104)||(34904778-34904872)
chr2 (10-104)||(41933153-41933247)
chr2 (10-71)||(20064933-20064994)
chr2 (21-80)||(11944888-11944946)
chr2 (10-105)||(33067709-33067804)
chr2 (10-119)||(4762371-4762480)
chr2 (10-67)||(14295650-14295707)
chr2 (19-103)||(29239240-29239324)
chr2 (12-100)||(37993102-37993190)
chr2 (10-103)||(9173697-9173791)
chr2 (37-106)||(33962932-33963000)
chr2 (19-70)||(1298987-1299038)
[»] scaffold0268 (1 HSPs)
scaffold0268 (12-103)||(20240-20330)
[»] chr6 (21 HSPs)
chr6 (10-104)||(32823699-32823793)
chr6 (10-103)||(17215674-17215767)
chr6 (10-102)||(1841005-1841097)
chr6 (10-92)||(3766299-3766381)
chr6 (19-128)||(7421703-7421812)
chr6 (19-102)||(31855085-31855168)
chr6 (13-106)||(1479081-1479173)
chr6 (31-103)||(2864919-2864992)
chr6 (10-70)||(26669303-26669363)
chr6 (31-103)||(2884130-2884205)
chr6 (37-106)||(12132576-12132644)
chr6 (19-104)||(27778786-27778869)
chr6 (37-106)||(34231944-34232012)
chr6 (10-98)||(2692427-2692514)
chr6 (9-106)||(9762823-9762921)
chr6 (32-104)||(18737807-18737879)
chr6 (10-103)||(23399132-23399225)
chr6 (10-102)||(1371157-1371248)
chr6 (32-100)||(30801785-30801853)
chr6 (10-60)||(34235412-34235462)
chr6 (31-91)||(24103781-24103841)
[»] chr1 (27 HSPs)
chr1 (10-104)||(2864165-2864258)
chr1 (19-104)||(43397005-43397090)
chr1 (10-105)||(38748710-38748805)
chr1 (21-102)||(6883120-6883201)
chr1 (22-138)||(31889196-31889313)
chr1 (21-100)||(36563737-36563814)
chr1 (10-103)||(47187812-47187905)
chr1 (10-98)||(32562350-32562437)
chr1 (10-66)||(34232735-34232791)
chr1 (10-106)||(39150604-39150700)
chr1 (10-105)||(14746189-14746284)
chr1 (10-100)||(44329618-44329708)
chr1 (10-102)||(4851237-4851328)
chr1 (10-70)||(38491243-38491303)
chr1 (21-104)||(3982298-3982380)
chr1 (10-76)||(8794438-8794504)
chr1 (10-103)||(7212795-7212883)
chr1 (10-67)||(39156283-39156340)
chr1 (10-103)||(44329486-44329579)
chr1 (10-103)||(44829294-44829386)
chr1 (10-100)||(30822770-30822860)
chr1 (10-89)||(42791147-42791226)
chr1 (12-103)||(45640571-45640661)
chr1 (10-100)||(8365525-8365615)
chr1 (14-60)||(39914639-39914685)
chr1 (10-98)||(2994968-2995055)
chr1 (54-98)||(8043938-8043982)
[»] scaffold0036 (1 HSPs)
scaffold0036 (10-102)||(62517-62609)
[»] scaffold0119 (1 HSPs)
scaffold0119 (10-70)||(1430-1490)
[»] scaffold1444 (2 HSPs)
scaffold1444 (14-76)||(950-1012)
scaffold1444 (12-71)||(1727-1786)
[»] scaffold0003 (1 HSPs)
scaffold0003 (10-104)||(103639-103733)
[»] scaffold0204 (1 HSPs)
scaffold0204 (19-102)||(25109-25193)


Alignment Details
Target: chr7 (Bit Score: 137; Significance: 1e-71; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 10 - 237
Target Start/End: Original strand, 25886192 - 25886419
Alignment:
Q  10 attattctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaagagtgccctaa 109  Q
    |||||||||||| ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  25886192 attattctcttagaaagtcaactattacaattttcaatacatttaatacacaacttttcatataaaacttaccatttaaagtgtttaaagagtgtcctaa 25886291  T
Q  110 gaacactcgtcgacattttctaattttaattgnnnnnnnnnnnnnacagaagcaacctcataactgaaataatatccttaatacaatctggaataaaatc 209  Q
     ||||||| |  |||||| | |||||||||||             |||||| ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  25886292 aaacactcattaacatttcccaattttaattgtttttctttttttacagaaacaacctcataactgaaataatctccttaatacaatctggaataaaatc 25886391  T
Q  210 atgagtatagcaacaagacagatatatg 237  Q
    ||||||||||||||||||||||||||||    
T  25886392 atgagtatagcaacaagacagatatatg 25886419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 19 - 106
Target Start/End: Complemental strand, 35496648 - 35496561
Alignment:
Q  19 ttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaagagtgccc 106  Q
    ||||||||||| |||||||||||||||||||||| | ||||||| |||||||  |||||||| |||||||||||||||||||||||||    
T  35496648 ttaaaaagtcaactattacaattttcaatgcattcattacacaatttttcattaaaaacttaccatttaaagtgtttaaagagtgccc 35496561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 28663223 - 28663127
Alignment:
Q  10 attattctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaagagtgccc 106  Q
    |||||||| ||||||||||| |||||||||||||||||||||| ||||||||| |||||||  ||| ||||  |||||||||| |||||||||||||    
T  28663223 attattcttttaaaaagtcaactattacaattttcaatgcattcaatacacaatttttcattaaaaccttactatttaaagtgcttaaagagtgccc 28663127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 13 - 106
Target Start/End: Original strand, 27123299 - 27123392
Alignment:
Q  13 attctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaagagtgccc 106  Q
    ||||| ||||||||||| |||||||||||| ||||||||| | ||||||||||||| |  |||||||| ||||||||||| |||||||||||||    
T  27123299 attcttttaaaaagtcaactattacaatttccaatgcattaagtacacaacttttcgttaaaaacttaccatttaaagtgcttaaagagtgccc 27123392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 10 - 103
Target Start/End: Complemental strand, 39321066 - 39320973
Alignment:
Q  10 attattctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaagagtg 103  Q
    |||||||| ||||||||||| |||||||||||||||||| ||| |||||||||||||| ||| ||||||||  | |||||||| ||||||||||    
T  39321066 attattcttttaaaaagtcaactattacaattttcaatgtattcaatacacaacttttaataaaaaacttactaattaaagtgcttaaagagtg 39320973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 21 - 105
Target Start/End: Complemental strand, 40754019 - 40753936
Alignment:
Q  21 aaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaagagtgcc 105  Q
    ||||| ||| |||||||| |||||||| ||||||||||||||||||||||  ||||||||||||||||| |||||||||||||||    
T  40754019 aaaaaatcaactattaca-ttttcaatacatttaatacacaacttttcattaaaaacttatcatttaaaatgtttaaagagtgcc 40753936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 12 - 106
Target Start/End: Original strand, 35731311 - 35731405
Alignment:
Q  12 tattctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaagagtgccc 106  Q
    |||||| ||||||||||| |||||||||||| ||||||| |||||||||||||||| ||| | ||||||  | |||||||| |||||||||||||    
T  35731311 tattcttttaaaaagtcaactattacaatttccaatgcacttaatacacaactttttataaagaacttactaattaaagtgcttaaagagtgccc 35731405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 10 - 103
Target Start/End: Original strand, 28770499 - 28770592
Alignment:
Q  10 attattctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaagagtg 103  Q
    |||||||| || |||||||| |||||||||||| ||||||||| |||||||||||||||||  ||||||||  ||||| |||| ||||||||||    
T  28770499 attattcttttgaaaagtcaactattacaatttccaatgcattcaatacacaacttttcattaaaaacttactatttagagtgcttaaagagtg 28770592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 21727490 - 21727394
Alignment:
Q  10 attattctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaagagtgccc 106  Q
    |||||||| ||||||||||| |||||||||||| |||| |||| ||||||||| | || ||  |||||||||||||| ||||| |||||||||||||    
T  21727490 attattcttttaaaaagtcaactattacaatttccaatacattcaatacacaaatatttattaaaaacttatcatttgaagtgcttaaagagtgccc 21727394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 8 - 106
Target Start/End: Complemental strand, 43224173 - 43224075
Alignment:
Q  8 atattattctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaagagtgccc 106  Q
    |||||||||| ||||||||||| || ||||||||| ||||| || ||||||||||||||||||  |||||||   |||||||||| ||||||| |||||    
T  43224173 atattattcttttaaaaagtcaactgttacaatttccaatgtatgtaatacacaacttttcattaaaaacttgctatttaaagtgcttaaagaatgccc 43224075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 34 - 103
Target Start/End: Complemental strand, 9719054 - 9718985
Alignment:
Q  34 ttacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaagagtg 103  Q
    ||||||||||||||| ||| | |||| |||||||||||||||||||| ||||||||||| ||||||||||    
T  9719054 ttacaattttcaatgtattcattacataacttttcatataaaacttaccatttaaagtgcttaaagagtg 9718985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 42936029 - 42936123
Alignment:
Q  10 attattctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaagagtgccc 106  Q
    |||||||| ||||||| ||| |||||||||||| ||||||||||||||||||| ||||||| ||||||||   ||||||||||| |||||| |||||    
T  42936029 attattcttttaaaaaatcaactattacaattt-caatgcatttaatacacaatttttcat-taaaacttgctatttaaagtgtataaagaatgccc 42936123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 44537363 - 44537459
Alignment:
Q  10 attattctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaagagtgccc 106  Q
    |||||||| ||||||||||| |||||| ||||| || || || ||||||| ||||||||||  ||||||||  |||||||||| |||||||||||||    
T  44537363 attattcttttaaaaagtcaactattataatttccattgtatataatacataacttttcattaaaaacttactatttaaagtgcttaaagagtgccc 44537459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 37158440 - 37158343
Alignment:
Q  10 attattctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtt-taaagagtgccc 106  Q
    |||||| | ||||||||||| |||||||||||||||||||| | |||||| || |||| ||| |||| |||| ||||||||||||  |||||||||||    
T  37158440 attattattttaaaaagtcaactattacaattttcaatgcagtgaatacataattttttataaaaaatttattatttaaagtgttcaaaagagtgccc 37158343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 12 - 103
Target Start/End: Original strand, 7653600 - 7653691
Alignment:
Q  12 tattctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaagagtg 103  Q
    |||||| ||||||||||| |||||| ||||| |||| |||| | |||||||||||||||  ||||||||   ||||||||| ||||||||||    
T  7653600 tattcttttaaaaagtcaactattataatttccaattcattcattacacaacttttcattaaaaacttactttttaaagtgcttaaagagtg 7653691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 12 - 103
Target Start/End: Original strand, 10200593 - 10200683
Alignment:
Q  12 tattctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaagagtg 103  Q
    |||||| ||||||||||| |  |||||||||  |||||||| |||||| ||||||  ||| |||||||||||||||||||| ||||||||||    
T  10200593 tattcttttaaaaagtcaaccgttacaatttcaaatgcattaaatacataactttctata-aaaacttatcatttaaagtgcttaaagagtg 10200683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 41 - 100
Target Start/End: Complemental strand, 48488231 - 48488172
Alignment:
Q  41 tttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaaga 100  Q
    |||||||||||| |||||| ||||||||||  |||||||||||||||||||| |||||||    
T  48488231 tttcaatgcattgaatacataacttttcattaaaaacttatcatttaaagtgcttaaaga 48488172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 72
Target Start/End: Original strand, 44592888 - 44592950
Alignment:
Q  10 attattctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatat 72  Q
    |||||||| ||||||||| | |||||||||||||||||| ||| |||||||||||||| ||||    
T  44592888 attattcttttaaaaagttaactattacaattttcaatgtattcaatacacaacttttaatat 44592950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 43234812 - 43234908
Alignment:
Q  10 attattctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaagagtgccc 106  Q
    |||||||| ||||||| | | |||||||||||| || | |||| |||||| ||||||||||  |||| |||  |||||||||| |||||||||||||    
T  43234812 attattcttttaaaaaataaactattacaatttccattacattcaatacataacttttcattaaaaatttactatttaaagtgcttaaagagtgccc 43234908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 10 - 76
Target Start/End: Original strand, 3692899 - 3692965
Alignment:
Q  10 attattctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaa 76  Q
    |||||||| ||||||| ||| |||||||||||| ||||||| | ||||||||| |||||||| ||||    
T  3692899 attattcttttaaaaaatcaactattacaatttccaatgcactcaatacacaatttttcataaaaaa 3692965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 10 - 80
Target Start/End: Original strand, 27337719 - 27337789
Alignment:
Q  10 attattctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaactta 80  Q
    |||||||| | ||||| ||| |||||||| ||| |||| |||| |||||||||||||||||| ||||||||    
T  27337719 attattctttaaaaaaatcaactattacagtttacaatacattaaatacacaacttttcataaaaaactta 27337789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 71
Target Start/End: Original strand, 18801074 - 18801123
Alignment:
Q  22 aaaagtcagctattacaattttcaatgcatttaatacacaacttttcata 71  Q
    |||||||| ||||||||||||||||| || | ||||||||||||||||||    
T  18801074 aaaagtcaactattacaattttcaatacaatgaatacacaacttttcata 18801123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 103
Target Start/End: Complemental strand, 29711573 - 29711484
Alignment:
Q  14 ttctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaagagtg 103  Q
    |||| ||||||| ||| | |||| ||||||||||| ||| | |||| || |||| |||||||| ||||||||| ||||||||||| ||||    
T  29711573 ttcttttaaaaaatcaacaattataattttcaatgtattcattacataattttttatataaaatttatcattttaagtgtttaaatagtg 29711484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 108
Target Start/End: Complemental strand, 26239591 - 26239527
Alignment:
Q  44 caatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaagagtgcccta 108  Q
    ||||||||| |||| |||| |||||||  ||||||||  |||||||||||||||||||| |||||    
T  26239591 caatgcattgaatatacaatttttcattaaaaacttactatttaaagtgtttaaagagtacccta 26239527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 100
Target Start/End: Complemental strand, 34398132 - 34398071
Alignment:
Q  37 caattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaaga 100  Q
    |||||||||||||||| || |||||| ||||  ||||||| |||||||||||||| ||||||||    
T  34398132 caattttcaatgcattgaaaacacaaatttt--tataaaatttatcatttaaagtctttaaaga 34398071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 103
Target Start/End: Complemental strand, 35923587 - 35923498
Alignment:
Q  10 attattctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaagagtg 103  Q
    |||||||| || |||| | | |||||||||||| ||||||||| ||||    ||||||||   ||||||||| |||||||||||||||||||||    
T  35923587 attattctttttaaaaataaactattacaatttccaatgcattcaata----acttttcaataaaaacttattatttaaagtgtttaaagagtg 35923498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 71
Target Start/End: Original strand, 18926376 - 18926410
Alignment:
Q  37 caattttcaatgcatttaatacacaacttttcata 71  Q
    |||||||||||||||| ||||||||||||||||||    
T  18926376 caattttcaatgcattgaatacacaacttttcata 18926410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 106
Target Start/End: Complemental strand, 14651459 - 14651378
Alignment:
Q  25 agtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaagagtgccc 106  Q
    ||||| || ||||||||| ||||||| | | |||||||||||||||  ||||| ||  |||| ||||| |||||||||||||    
T  14651459 agtcaactgttacaatttccaatgcaatcattacacaacttttcattaaaaacctactattttaagtgcttaaagagtgccc 14651378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 103
Target Start/End: Complemental strand, 34117942 - 34117862
Alignment:
Q  23 aaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaagagtg 103  Q
    ||||||| ||||||| |||| |||||| || | || |||| |||| ||  ||||||||||||||||| || ||||||||||    
T  34117942 aaagtcaactattacgatttccaatgcgttaattatacaattttttattaaaaacttatcatttaaaatgcttaaagagtg 34117862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 65; Significance: 1e-28; HSPs: 19)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 21 - 105
Target Start/End: Complemental strand, 26900096 - 26900012
Alignment:
Q  21 aaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaagagtgcc 105  Q
    ||||||||| |||||||||||||||||||||||| |||| |||||||||||||||| ||| ||||||||||||||||||||||||    
T  26900096 aaaaagtcaactattacaattttcaatgcatttattacataacttttcatataaaatttaccatttaaagtgtttaaagagtgcc 26900012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 12 - 106
Target Start/End: Complemental strand, 41309936 - 41309839
Alignment:
Q  12 tattctcttaaaaagtcagctattacaattttcaatgcatttaataca---caacttttcatataaaacttatcatttaaagtgtttaaagagtgccc 106  Q
    |||||| ||||||||| |  |||||||||||||||||||||| ||| |   ||| |||||||  ||||||||||||||||||||||||||||||||||    
T  41309936 tattcttttaaaaagttaattattacaattttcaatgcatttgatatagtacaatttttcattaaaaacttatcatttaaagtgtttaaagagtgccc 41309839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 10 - 102
Target Start/End: Complemental strand, 29083984 - 29083891
Alignment:
Q  10 attattctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaactta-tcatttaaagtgtttaaagagt 102  Q
    |||||||| ||||||||| | ||||||||||||| |||||||||||||||||||||||||   |||||||| |  ||||||||| |||||||||    
T  29083984 attattcttttaaaaagttaactattacaatttttaatgcatttaatacacaacttttcaataaaaacttactattttaaagtgcttaaagagt 29083891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 10 - 98
Target Start/End: Original strand, 16662999 - 16663086
Alignment:
Q  10 attattctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaa 98  Q
    |||||| | ||||||||||| |||||||||||  ||||||| | |||||||||||||| ||| ||||||||| ||||||||||||||||    
T  16662999 attattattttaaaaagtcaactattacaattaccaatgcagtgaatacacaactttttata-aaaacttattatttaaagtgtttaaa 16663086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 10 - 70
Target Start/End: Original strand, 26143092 - 26143152
Alignment:
Q  10 attattctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcat 70  Q
    |||||||| ||||||||||| ||||||||||||| |||||||||||||||||| |||||||    
T  26143092 attattcttttaaaaagtcaactattacaattttgaatgcatttaatacacaatttttcat 26143152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 12 - 80
Target Start/End: Original strand, 42939856 - 42939924
Alignment:
Q  12 tattctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaactta 80  Q
    |||||| ||||||||||| ||||| |||||||||||| ||||||||||||| ||||||| |||||||||    
T  42939856 tattcttttaaaaagtcaactattgcaattttcaatgaatttaatacacaatttttcatttaaaactta 42939924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 87
Target Start/End: Complemental strand, 42846090 - 42846012
Alignment:
Q  10 attattctcttaaaaagtcagctattacaattttcaat-gcatttaatacacaacttttcatataaaacttatcattta 87  Q
    |||||||| | ||||||||| ||||| ||||||||||| ||||| |||||||||||||||||  |||||||||||||||    
T  42846090 attattctttgaaaaagtcaactatttcaattttcaattgcattcaatacacaacttttcattaaaaacttatcattta 42846012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 10 - 103
Target Start/End: Complemental strand, 48180255 - 48180162
Alignment:
Q  10 attattctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaagagtg 103  Q
    |||||||| ||||||||||| |||||||||||| |||||||||   ||| |||| ||||||| ||||||||  |||||||||| | ||||||||    
T  48180255 attattcttttaaaaagtcaactattacaatttccaatgcattggttacccaacatttcataaaaaacttactatttaaagtgataaaagagtg 48180162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 103
Target Start/End: Original strand, 24791527 - 24791614
Alignment:
Q  19 ttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatca---tttaaagtgtttaaagagtg 103  Q
    ||||||||||| |||||||||||||||||| ||| |||||| ||||||||||  ||||||||  |   |||||||| |||||||||||    
T  24791527 ttaaaaagtcaactattacaattttcaatgtattcaatacataacttttcattaaaaacttagtactatttaaagtatttaaagagtg 24791614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 39551939 - 39551843
Alignment:
Q  10 attattctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaagagtgccct 107  Q
    |||||||| ||||||| ||| |||| |||||||||||| || | |||| ||||||||||||| | ||||||  | |||||||||||||||||| ||||    
T  39551939 attattcttttaaaaaatcaactat-acaattttcaatacactcaataaacaacttttcataaagaacttactaattaaagtgtttaaagagtaccct 39551843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 97
Target Start/End: Original strand, 40673456 - 40673543
Alignment:
Q  10 attattctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaa 97  Q
    |||||||| ||||||| ||| ||||||||||||  |||  ||| ||||||| ||||||| |  |||||||||||||||||||| ||||    
T  40673456 attattcttttaaaaattcaactattacaatttctaatatattcaatacactacttttctttaaaaacttatcatttaaagtgcttaa 40673543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 75
Target Start/End: Complemental strand, 22730570 - 22730505
Alignment:
Q  10 attattctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaa 75  Q
    |||||||| ||||||||||| |||||| ||||||||||||||| | |||| || ||||||| ||||    
T  22730570 attattcttttaaaaagtcaactattataattttcaatgcattaattacaaaaattttcatttaaa 22730505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 83
Target Start/End: Complemental strand, 49362438 - 49362365
Alignment:
Q  10 attattctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatca 83  Q
    |||||||| ||||||||| | |||||||||||| ||||| |||||||| |||| |||| ||  |||||||||||    
T  49362438 attattcttttaaaaagttaactattacaatttccaatgtatttaatatacaattttttattaaaaacttatca 49362365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 103
Target Start/End: Original strand, 51351299 - 51351392
Alignment:
Q  10 attattctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaagagtg 103  Q
    |||||||| |||||||||    ||||| ||||| |||| |||||||||||||| |||||||  ||||||||   ||||||||| ||||||||||    
T  51351299 attattcttttaaaaagtttagtattataatttccaatacatttaatacacaatttttcattaaaaacttactttttaaagtgcttaaagagtg 51351392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 80
Target Start/End: Original strand, 47638916 - 47638987
Alignment:
Q  9 tattattctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaactta 80  Q
    |||||| || ||||||||| | ||||||||||||| |||||| | ||||||||| |||||||| | ||||||    
T  47638916 tattatgcttttaaaaagttaactattacaatttttaatgcactcaatacacaatttttcataaagaactta 47638987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 97
Target Start/End: Original strand, 24313600 - 24313660
Alignment:
Q  37 caattttcaatgca-tttaatacacaacttttcatataaaacttatcatttaaagtgtttaa 97  Q
    |||||||||||||| |||| ||||||| |||||||| |||| |||||||||||||| |||||    
T  24313600 caattttcaatgcattttactacacaaattttcata-aaaagttatcatttaaagtctttaa 24313660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 54 - 103
Target Start/End: Original strand, 26143164 - 26143213
Alignment:
Q  54 aatacacaacttttcatataaaacttatcatttaaagtgtttaaagagtg 103  Q
    ||||||||| |||||||  |||||||| |||||||| |||||||||||||    
T  26143164 aatacacaaattttcattaaaaacttaccatttaaaatgtttaaagagtg 26143213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 103
Target Start/End: Complemental strand, 39924712 - 39924620
Alignment:
Q  10 attattctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaagagtg 103  Q
    |||||| | |||||| ||||  ||||| |||||| |||||||| |||| || |||||||| ||||  | ||||||||||||| |||||||||||    
T  39924712 attatttttttaaaatgtcaattattataatttttaatgcattgaatagacgacttttcacataat-catatcatttaaagtttttaaagagtg 39924620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 102
Target Start/End: Complemental strand, 48811428 - 48811361
Alignment:
Q  34 ttacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaagagt 102  Q
    |||||| |||||||||||| | ||||||| |||||||| ||||||||  ||| ||||| ||||||||||    
T  48811428 ttacaaatttcaatgcattgattacacaatttttcata-aaaacttactattaaaagtttttaaagagt 48811361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 62; Significance: 7e-27; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 10 - 99
Target Start/End: Original strand, 3140836 - 3140925
Alignment:
Q  10 attattctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaag 99  Q
    |||||||| ||||||||||| ||||||||||||||||| ||||||||| ||||||||| || |||||||||| |||||||||||||||||    
T  3140836 attattcttttaaaaagtcaactattacaattttcaattcatttaatatacaactttttatttaaaacttattatttaaagtgtttaaag 3140925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 10 - 102
Target Start/End: Original strand, 8208201 - 8208293
Alignment:
Q  10 attattctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaagagt 102  Q
    |||||||| |||||||||||  |||||||||||| |||||||| | |||| |||||||||||||||||||||||||||| |||||||||||||    
T  8208201 attattcttttaaaaagtcaattattacaatttttaatgcattcattacataacttttcatataaaacttatcatttaatgtgtttaaagagt 8208293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 10 - 103
Target Start/End: Original strand, 15720089 - 15720182
Alignment:
Q  10 attattctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaagagtg 103  Q
    |||||||| ||||||||||| |||||||||||| ||||| | |||||||||||||||||||| | ||||||  | |||||||||||||||||||    
T  15720089 attattcttttaaaaagtcaactattacaatttccaatgaacttaatacacaacttttcataaagaacttactaattaaagtgtttaaagagtg 15720182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 19 - 104
Target Start/End: Original strand, 30104835 - 30104920
Alignment:
Q  19 ttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaagagtgc 104  Q
    ||||||||||| | |||||||||| ||||||||| |||||||||||||||||  |||||||| || ||||||||||||||||||||    
T  30104835 ttaaaaagtcaacaattacaatttccaatgcattcaatacacaacttttcattaaaaacttaccacttaaagtgtttaaagagtgc 30104920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 34899220 - 34899123
Alignment:
Q  10 attattctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaagagtgccct 107  Q
    |||||||| |||||||| ||  |||||||||||  ||||||||||||| | |||||||||| |||||||||  |||||||||||||||||||||||||    
T  34899220 attattcttttaaaaagacaattattacaatttctaatgcatttaatatataacttttcatttaaaacttactatttaaagtgtttaaagagtgccct 34899123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 10 - 102
Target Start/End: Original strand, 17692284 - 17692376
Alignment:
Q  10 attattctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaagagt 102  Q
    |||||||||||||||||||| || ||||||||||||||||| ||| |||||||||||||||  ||||| ||  |||| ||||| |||||||||    
T  17692284 attattctcttaaaaagtcaactgttacaattttcaatgcaattactacacaacttttcattaaaaacctactattttaagtgcttaaagagt 17692376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 30501224 - 30501128
Alignment:
Q  10 attattctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaagagtgccc 106  Q
    |||||||| |||||||||||  ||||||||||| |||| |||| ||||||||||||||||| |||||||||  |||||||||| ||||  |||||||    
T  30501224 attattcttttaaaaagtcaattattacaatttccaatacattcaatacacaacttttcatttaaaacttactatttaaagtgcttaacaagtgccc 30501128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 30541567 - 30541471
Alignment:
Q  10 attattctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaagagtgccc 106  Q
    |||||||| |||||||||||  ||||||||||| |||| |||| ||||||||||||||||| |||||||||  |||||||||| ||||  |||||||    
T  30541567 attattcttttaaaaagtcaattattacaatttccaatacattcaatacacaacttttcatttaaaacttactatttaaagtgcttaacaagtgccc 30541471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 10 - 100
Target Start/End: Original strand, 8221144 - 8221234
Alignment:
Q  10 attattctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaaga 100  Q
    |||||||||||||||||||| ||||||||| |||||||||||| ||||||||| |||| ||  ||||||||  ||||||| || |||||||    
T  8221144 attattctcttaaaaagtcaactattacaactttcaatgcattcaatacacaattttttattaaaaacttactatttaaaatgcttaaaga 8221234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 10 - 103
Target Start/End: Original strand, 7719226 - 7719319
Alignment:
Q  10 attattctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaagagtg 103  Q
    |||||||| ||||||| ||| |||||||||||| ||||  ||| |||||||||||||||||  ||||||||| |||||||||| ||||| ||||    
T  7719226 attattcttttaaaaaatcaactattacaatttccaatatattcaatacacaacttttcattaaaaacttattatttaaagtgcttaaaaagtg 7719319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 10 - 111
Target Start/End: Complemental strand, 9276664 - 9276563
Alignment:
Q  10 attattctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaagagtgccctaa 109  Q
    |||||| | ||||||| ||| |||||| ||||||||||||||| |||||| ||||||||||  ||||||||  |||||||||| ||||||||  ||||||    
T  9276664 attatttttttaaaaaatcaactattataattttcaatgcattcaatacataacttttcattaaaaacttactatttaaagtgcttaaagagcaccctaa 9276565  T
Q  110 ga 111  Q
    ||    
T  9276564 ga 9276563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 10 - 103
Target Start/End: Complemental strand, 18229686 - 18229593
Alignment:
Q  10 attattctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaagagtg 103  Q
    |||||||| ||||||||| | |||||||||||| |||| |||| |||| |||| |||||||  |||||||| ||||||||||| ||||||||||    
T  18229686 attattcttttaaaaagttaactattacaatttccaatacattcaataaacaatttttcattaaaaacttaccatttaaagtgcttaaagagtg 18229593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 44 - 106
Target Start/End: Original strand, 7968446 - 7968508
Alignment:
Q  44 caatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaagagtgccc 106  Q
    |||||||||||||||||||||||||||  ||||||||  |||||||||| |||||||||||||    
T  7968446 caatgcatttaatacacaacttttcattaaaaacttactatttaaagtgcttaaagagtgccc 7968508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 10 - 103
Target Start/End: Complemental strand, 112570 - 112477
Alignment:
Q  10 attattctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaagagtg 103  Q
    |||||||| || |||||||| ||  |||||||||||||| ||||||||||||| |||||||  |||| || | |||||||||| ||||||||||    
T  112570 attattcttttgaaaagtcaactgatacaattttcaatgtatttaatacacaatttttcattaaaaatttgttatttaaagtgcttaaagagtg 112477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 10 - 103
Target Start/End: Complemental strand, 16667376 - 16667283
Alignment:
Q  10 attattctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaagagtg 103  Q
    |||||||| |||||||||||  ||||||||||| |||| |||| ||||||||| |||||||  ||||||||  |||||||||| ||||| ||||    
T  16667376 attattcttttaaaaagtcaattattacaatttccaatacattcaatacacaatttttcattaaaaacttactatttaaagtgcttaaaaagtg 16667283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 21 - 128
Target Start/End: Complemental strand, 2918670 - 2918562
Alignment:
Q  21 aaaaagtcagctattacaattttcaatgcatttaatacacaacttttca-tataaaacttatcatttaaagtgtttaaagagtgccctaagaacactcgt 119  Q
    |||| |||| |||||| ||||| |||||||||||||||||||||||||| || |||  |||  ||||||| || ||||||||||||||||| | ||||||    
T  2918670 aaaatgtcaactattataatttccaatgcatttaatacacaacttttcattaaaaattttacaatttaaaatgcttaaagagtgccctaaggatactcgt 2918571  T
Q  120 cgacatttt 128  Q
      |||||||    
T  2918570 taacatttt 2918562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 98
Target Start/End: Original strand, 14043407 - 14043491
Alignment:
Q  14 ttctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaa 98  Q
    |||| ||||||||||| |||| |||||||||| | |||||||||||||| |||| ||||||||||||  ||||||| || |||||    
T  14043407 ttcttttaaaaagtcaactatcacaattttcattacatttaatacacaattttttatataaaacttaatatttaaaatgcttaaa 14043491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 37 - 129
Target Start/End: Original strand, 42877293 - 42877384
Alignment:
Q  37 caattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaagagtgccctaagaacactcgtcgacattttc 129  Q
    |||||||||||| ||| ||||||||| ||| |||| |||| |||  ||||||||| ||||||||||||||| |||| ||||||  ||||||||    
T  42877293 caattttcaatgtattgaatacacaattttccata-aaaatttactatttaaagtctttaaagagtgcccttagaatactcgttaacattttc 42877384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 103
Target Start/End: Original strand, 13480062 - 13480134
Alignment:
Q  31 ctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaagagtg 103  Q
    |||||| ||||||||||||||| |||||||||  ||| ||  |||| |||| |||||||||| ||||||||||    
T  13480062 ctattataattttcaatgcattcaatacacaatattttattaaaaatttattatttaaagtggttaaagagtg 13480134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 101
Target Start/End: Original strand, 18963846 - 18963926
Alignment:
Q  22 aaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaactt-atcatttaaagtgtttaaagag 101  Q
    |||||| | |||||||||||||||||||||| ||||||||| |||| ||| |||| || | |||||||| |||| ||||||    
T  18963846 aaaagttaactattacaattttcaatgcattaaatacacaattttttataaaaaaattaaccatttaaaatgttgaaagag 18963926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 61; Significance: 3e-26; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 7852628 - 7852532
Alignment:
Q  10 attattctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaagagtgccc 106  Q
    |||||||| ||||||| | | ||||||||||||||||||||||||||||||||||||||||  ||||||||  |||||||||| |||||||||||||    
T  7852628 attattcttttaaaaaattaactattacaattttcaatgcatttaatacacaacttttcattaaaaacttactatttaaagtgcttaaagagtgccc 7852532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 22 - 106
Target Start/End: Complemental strand, 24175471 - 24175387
Alignment:
Q  22 aaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaagagtgccc 106  Q
    |||||| | ||||||||||||| |||||||||||||||||||||||| || |||||||| ||||||||||| |||||||||||||    
T  24175471 aaaagtaaactattacaattttaaatgcatttaatacacaacttttcgtacaaaacttaccatttaaagtgcttaaagagtgccc 24175387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 21 - 103
Target Start/End: Complemental strand, 7444458 - 7444376
Alignment:
Q  21 aaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaagagtg 103  Q
    ||||||||| |||||||||||||||||||||| ||||||||||||||| |  ||||||||  |||||||||||||||||||||    
T  7444458 aaaaagtcaactattacaattttcaatgcattcaatacacaacttttctttaaaaacttagtatttaaagtgtttaaagagtg 7444376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 10 - 103
Target Start/End: Original strand, 51834936 - 51835029
Alignment:
Q  10 attattctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaagagtg 103  Q
    |||||||| ||||||||||| |||||| ||||| ||||||||| |||||||||||||||||  |||| |||  |||||||||||||||||||||    
T  51834936 attattcttttaaaaagtcaactattataatttccaatgcattaaatacacaacttttcattaaaaatttactatttaaagtgtttaaagagtg 51835029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 45900233 - 45900137
Alignment:
Q  10 attattctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaagagtgccc 106  Q
    |||||||| ||| ||||||| |||| ||||||| ||||||||| ||||||||||||||||||| |||||||  | |||||||| |||||||||||||    
T  45900233 attattcttttataaagtcaactatcacaatttccaatgcattcaatacacaacttttcatatgaaacttactaattaaagtgcttaaagagtgccc 45900137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 19 - 106
Target Start/End: Original strand, 8261139 - 8261226
Alignment:
Q  19 ttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaagagtgccc 106  Q
    ||||||||||| || |||||||||||||||||||||||||| ||||||||||  ||||||||  |||||||||| || ||||||||||    
T  8261139 ttaaaaagtcaactgttacaattttcaatgcatttaatacataacttttcattaaaaacttactatttaaagtgcttgaagagtgccc 8261226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 19 - 106
Target Start/End: Original strand, 8274556 - 8274643
Alignment:
Q  19 ttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaagagtgccc 106  Q
    ||||||||||| || |||||||||||||||||||||||||| ||||||||||  ||||||||  |||||||||| || ||||||||||    
T  8274556 ttaaaaagtcaactgttacaattttcaatgcatttaatacataacttttcattaaaaacttactatttaaagtgcttgaagagtgccc 8274643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 10 - 100
Target Start/End: Complemental strand, 35777783 - 35777693
Alignment:
Q  10 attattctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaaga 100  Q
    |||||||| ||||||||| | ||||||||||||  |||||||| |||||||||||||||||  |||||||| ||||||||||| |||||||    
T  35777783 attattcttttaaaaagttaactattacaatttctaatgcattcaatacacaacttttcattaaaaacttaccatttaaagtgcttaaaga 35777693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 10 - 98
Target Start/End: Original strand, 31429299 - 31429387
Alignment:
Q  10 attattctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaa 98  Q
    |||||||| ||||||| ||| |||||||||||| ||||||||| ||||||||||||||||| |||||||||  | |||||||| |||||    
T  31429299 attattcttttaaaaaatcaactattacaatttccaatgcattcaatacacaacttttcatttaaaacttactaattaaagtgcttaaa 31429387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 10 - 102
Target Start/End: Complemental strand, 50341951 - 50341859
Alignment:
Q  10 attattctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaagagt 102  Q
    |||||||| ||||||||||| |||||||||||| ||| ||||| ||||||||||||||||| ||||| |||  || ||||||| |||||||||    
T  50341951 attattcttttaaaaagtcaactattacaatttccaacgcattcaatacacaacttttcatttaaaatttactatataaagtgcttaaagagt 50341859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 21 - 80
Target Start/End: Complemental strand, 39195800 - 39195741
Alignment:
Q  21 aaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaactta 80  Q
    |||| |||| |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  39195800 aaaaggtcaactattacaattttcaatgcattgaatacacaacttttcatataaaactta 39195741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 10 - 105
Target Start/End: Original strand, 50427011 - 50427106
Alignment:
Q  10 attattctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaagagtgcc 105  Q
    |||||||| || |||||||| |||||||||||| ||||||| | || ||||||||||||||  |||| |||  |||||||||||||||||||||||    
T  50427011 attattcttttgaaaagtcaactattacaatttccaatgcaatcaacacacaacttttcattaaaaatttactatttaaagtgtttaaagagtgcc 50427106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 34 - 103
Target Start/End: Complemental strand, 13585321 - 13585252
Alignment:
Q  34 ttacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaagagtg 103  Q
    ||||||||||||||| ||| | |||| |||||||||||||||||||| ||||||||||| ||||||||||    
T  13585321 ttacaattttcaatgtattcattacataacttttcatataaaacttaccatttaaagtgcttaaagagtg 13585252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 10 - 103
Target Start/End: Complemental strand, 24229730 - 24229637
Alignment:
Q  10 attattctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaagagtg 103  Q
    |||||||| || |||||| |  ||| ||||||||||||||||||||||||||| |||||||  ||||||| | |||||||||| ||||||||||    
T  24229730 attattctttttaaaagtaaattatcacaattttcaatgcatttaatacacaatttttcattaaaaactttttatttaaagtgcttaaagagtg 24229637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 9 - 89
Target Start/End: Complemental strand, 27953126 - 27953046
Alignment:
Q  9 tattattctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaa 89  Q
    ||||||| | ||||||||| | |||||||||||||||||||||| ||||||||||||||| |  |||||||| ||||||||    
T  27953126 tattattattttaaaaagttaactattacaattttcaatgcattcaatacacaacttttcgttaaaaacttaccatttaaa 27953046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 19 - 103
Target Start/End: Original strand, 31690413 - 31690497
Alignment:
Q  19 ttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaagagtg 103  Q
    ||||||||||| || || |||||||||||||||| ||||||||||||||||||  ||| |||  ||||||||||||||| |||||    
T  31690413 ttaaaaagtcaactgttgcaattttcaatgcattgaatacacaacttttcataagaaatttactatttaaagtgtttaaggagtg 31690497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 10 - 102
Target Start/End: Complemental strand, 34391791 - 34391699
Alignment:
Q  10 attattctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaagagt 102  Q
    |||||||| ||| |||||||| ||||||||||| ||||||| | |||||||||||||| ||  ||||||||  |||| |||||||||||||||    
T  34391791 attattcttttataaagtcagttattacaatttccaatgcaatcaatacacaactttttattaaaaacttactattttaagtgtttaaagagt 34391699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 10 - 101
Target Start/End: Complemental strand, 47995821 - 47995730
Alignment:
Q  10 attattctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaagag 101  Q
    |||| ||| ||||||||| |  ||||||||||||||||||||| |||||| ||||||||||  ||||||||  |||||||||| ||||||||    
T  47995821 attactcttttaaaaagttaattattacaattttcaatgcattcaatacataacttttcattaaaaacttacaatttaaagtgcttaaagag 47995730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 100
Target Start/End: Complemental strand, 31174735 - 31174645
Alignment:
Q  10 attattctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaaga 100  Q
    |||||||| ||||||||| | || ||||||||||||||  ||| | |||||||||||||||  |||| |||||||||||||| ||||||||    
T  31174735 attattcttttaaaaagttaactgttacaattttcaatatattcattacacaacttttcattaaaaatttatcatttaaagtatttaaaga 31174645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 104
Target Start/End: Original strand, 41462071 - 41462165
Alignment:
Q  10 attattctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaagagtgc 104  Q
    |||||||| ||||||||||| ||||||||||||   |||||||||||||| || |||||||  ||||||||  ||||||| || |||||||||||    
T  41462071 attattcttttaaaaagtcaactattacaatttcttatgcatttaatacataatttttcattaaaaacttactatttaaaatgcttaaagagtgc 41462165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 25115347 - 25115251
Alignment:
Q  10 attattctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgttt-aaagagtgccc 106  Q
    |||||| | ||||||||| | |||||||||||| ||||||| | |||||||||||||| ||| ||||||||  ||||||||||||| |||||||||||    
T  25115347 attattattttaaaaagttaactattacaatttccaatgcagtgaatacacaactttttata-aaaacttactatttaaagtgtttaaaagagtgccc 25115251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 10 - 86
Target Start/End: Complemental strand, 49084485 - 49084408
Alignment:
Q  10 attattctcttaaaaagtcagctattacaattttcaatg-catttaatacacaacttttcatataaaacttatcattt 86  Q
    |||||||| ||||||||||| ||||||||||||||||||  ||| |||||||||||||||||  |||||||| |||||    
T  49084485 attattcttttaaaaagtcaactattacaattttcaatgaaattcaatacacaacttttcattaaaaacttaccattt 49084408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 86
Target Start/End: Complemental strand, 14031411 - 14031347
Alignment:
Q  22 aaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcattt 86  Q
    |||||||| | |||||||| ||||||||||| |||| |||||||||||||||||||||| |||||    
T  14031411 aaaagtcaacaattacaatattcaatgcattcaatatacaacttttcatataaaacttaccattt 14031347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 10 - 102
Target Start/End: Original strand, 49400634 - 49400726
Alignment:
Q  10 attattctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaagagt 102  Q
    |||||||| ||||||| ||| |||||||||||| ||||| ||||||||||| |||||||||  |||  || | |||||||||| |||||||||    
T  49400634 attattcttttaaaaaatcaactattacaatttccaatgtatttaatacacgacttttcattaaaattttgttatttaaagtgcttaaagagt 49400726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 19 - 103
Target Start/End: Original strand, 36702815 - 36702895
Alignment:
Q  19 ttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaagagtg 103  Q
    |||||||||||  ||||||||||||||||||||| ||||||||| |||||||  ||||||||    |||||||| ||||||||||    
T  36702815 ttaaaaagtcaattattacaattttcaatgcattcaatacacaatttttcattaaaaactta----ttaaagtgcttaaagagtg 36702895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 10 - 67
Target Start/End: Original strand, 51736376 - 51736433
Alignment:
Q  10 attattctcttaaaaagtcagctattacaattttcaatgcatttaatacacaactttt 67  Q
    |||||||| ||||||||||| |||||| |||||||||| |||| ||||||||||||||    
T  51736376 attattcttttaaaaagtcaactattataattttcaatacattgaatacacaactttt 51736433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 71
Target Start/End: Complemental strand, 37138244 - 37138185
Alignment:
Q  12 tattctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcata 71  Q
    |||||| ||||||||||| |||||| ||||| ||||||| | ||||||||||||||||||    
T  37138244 tattcttttaaaaagtcaactattataatttccaatgcactcaatacacaacttttcata 37138185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 103
Target Start/End: Original strand, 37440848 - 37440941
Alignment:
Q  10 attattctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaagagtg 103  Q
    |||||| | ||||||||||| ||||||||||||||||||  || |||||| || |||||||   ||| ||| ||||||||||  ||||||||||    
T  37440848 attattattttaaaaagtcaactattacaattttcaatgtgttcaatacataatttttcattataaatttaccatttaaagtacttaaagagtg 37440941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 56 - 103
Target Start/End: Original strand, 24396254 - 24396301
Alignment:
Q  56 tacacaacttttcatataaaacttatcatttaaagtgtttaaagagtg 103  Q
    |||| |||||||||||||||||||| ||||||||||  ||||||||||    
T  24396254 tacataacttttcatataaaacttaccatttaaagtacttaaagagtg 24396301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 103
Target Start/End: Original strand, 37060581 - 37060664
Alignment:
Q  21 aaaaagtcagctattacaattttcaatgcatttaatacacaa-cttttcatataaaacttatcatttaaagtgtttaaagagtg 103  Q
    ||||| ||| |||||| ||||||||||||| |||||||| ||  |||||||  |||||||| ||||||||||| ||||| ||||    
T  37060581 aaaaaatcaactattataattttcaatgcaattaatacataattttttcattaaaaacttaccatttaaagtgcttaaaaagtg 37060664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 53014269 - 53014203
Alignment:
Q  31 ctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaa 97  Q
    |||||||||||| |||| |||| |||||||||||||| ||  ||||| || ||||||||||| ||||    
T  53014269 ctattacaatttccaatacattcaatacacaactttttattaaaaacataccatttaaagtgcttaa 53014203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 101
Target Start/End: Complemental strand, 14949069 - 14948981
Alignment:
Q  12 tattctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaagag 101  Q
    |||||| | |||||||||  | |||||| |||||||||||| | ||||||| |||||||| ||||||| | ||| |||||| ||||||||    
T  14949069 tattctttaaaaaagtcaaatgttacaaatttcaatgcattgattacacaaattttcata-aaaacttgttattaaaagtgcttaaagag 14948981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 106
Target Start/End: Complemental strand, 34469624 - 34469556
Alignment:
Q  37 caattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaagagtgccc 106  Q
    |||||| | ||||||| ||| ||||| |||||||| |||| |||| ||||||||| ||||||||||||||    
T  34469624 caatttccgatgcattaaatgcacaatttttcata-aaaatttattatttaaagtttttaaagagtgccc 34469556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 12618778 - 12618683
Alignment:
Q  10 attattctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaagagtgccc 106  Q
    |||||| | |||||||||||  | ||| || |||||||||||| | || |||| |||||||| |||||||| | || || |||||||||||||||||    
T  12618778 attatttttttaaaaagtcaaatgttataaatttcaatgcattgattatacaaattttcata-aaaacttaactttaaaggtgtttaaagagtgccc 12618683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 102
Target Start/End: Original strand, 20394660 - 20394750
Alignment:
Q  10 attattctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaagagt 102  Q
    |||||||| ||||||||| | |||||||||||| |||| |||| |||||| |  |||||||  |||||||  |||||||| ||||||||||||    
T  20394660 attattcttttaaaaagtgaactattacaatttccaatacattcaataca-acattttcattaaaaactt-ccatttaaaatgtttaaagagt 20394750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 80
Target Start/End: Original strand, 48315948 - 48316015
Alignment:
Q  12 tattctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaactta 80  Q
    |||||| | |||||||||  | |||||| |||||||||||| | |||||||||||||||| ||||||||    
T  48315948 tattctttaaaaaagtcaaatgttacaaatttcaatgcattgattacacaacttttcata-aaaactta 48316015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 48337587 - 48337671
Alignment:
Q  19 ttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcat-ataaaacttatcatttaaagtgtttaaagagt 102  Q
    ||||||| ||| |||||||||||||||||||||| | ||| ||| |||| || | ||||||||  ||||||| || |||||||||    
T  48337587 ttaaaaaatcaactattacaattttcaatgcattgattactcaattttttataaaaaaacttactatttaaaatgcttaaagagt 48337671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 60; Significance: 1e-25; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 21 - 104
Target Start/End: Complemental strand, 42636439 - 42636356
Alignment:
Q  21 aaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaagagtgc 104  Q
    ||||||||| |||||||||||| |||||||||||||||||||||||||||  |||||||| ||||||||||| |||||||||||    
T  42636439 aaaaagtcaactattacaatttacaatgcatttaatacacaacttttcattaaaaacttaccatttaaagtgcttaaagagtgc 42636356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 10 - 104
Target Start/End: Original strand, 1135183 - 1135277
Alignment:
Q  10 attattctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaagagtgc 104  Q
    |||||||| ||||||||||| |||||||||||||||||| ||| |||| |||||||||| |  |||||||| |||||||||||||||||||||||    
T  1135183 attattcttttaaaaagtcaactattacaattttcaatgtattcaatatacaacttttccttaaaaacttaccatttaaagtgtttaaagagtgc 1135277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 10 - 119
Target Start/End: Complemental strand, 27801310 - 27801201
Alignment:
Q  10 attattctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaagagtgccctaa 109  Q
    |||||||| ||||||||||| |||||||||||||||||||||| | |||||||||||| ||  ||||||||  |||||||||| ||||||||| ||| ||    
T  27801310 attattcttttaaaaagtcaactattacaattttcaatgcattcattacacaactttttattaaaaacttactatttaaagtgcttaaagagtaccccaa 27801211  T
Q  110 gaacactcgt 119  Q
    || |||||||    
T  27801210 gagcactcgt 27801201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 10 - 103
Target Start/End: Complemental strand, 1369943 - 1369850
Alignment:
Q  10 attattctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaagagtg 103  Q
    |||||||| ||||||||||| |||| ||||||| ||||||||| |||| | ||||||||||||||||||||| | |||||||| ||||||||||    
T  1369943 attattcttttaaaaagtcaactatcacaatttccaatgcattcaatagataacttttcatataaaacttattaattaaagtgcttaaagagtg 1369850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 10 - 119
Target Start/End: Complemental strand, 4384219 - 4384111
Alignment:
Q  10 attattctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaagagtgccctaa 109  Q
    |||||||| ||||||| ||| |||||||||||| ||||||||| |||||||||| ||||||  |||| ||||||||||||||| |||||||||| ||  |    
T  4384219 attattcttttaaaaaatcaactattacaatttccaatgcattcaatacacaac-tttcattaaaaatttatcatttaaagtgcttaaagagtgtcccga 4384121  T
Q  110 gaacactcgt 119  Q
    ||||||||||    
T  4384120 gaacactcgt 4384111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 10 - 100
Target Start/End: Complemental strand, 2258175 - 2258085
Alignment:
Q  10 attattctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaaga 100  Q
    |||||||| ||||||||| |   ||||||||||| |||| ||||||||||||||||||||| ||||||||| ||||||||||| |||||||    
T  2258175 attattcttttaaaaagttaatcattacaatttttaatgtatttaatacacaacttttcatttaaaacttaccatttaaagtgcttaaaga 2258085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 33013067 - 33013163
Alignment:
Q  10 attattctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaagagtgccc 106  Q
    |||||||| ||||||||||| |||||||||||| ||||| | | |||||||||||||||||| | ||||||  | |||||||| |||||||||||||    
T  33013067 attattcttttaaaaagtcaactattacaatttccaatgtactcaatacacaacttttcataaagaacttactaattaaagtgcttaaagagtgccc 33013163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 103
Target Start/End: Original strand, 28207649 - 28207740
Alignment:
Q  13 attctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaa-gtgtttaaagagtg 103  Q
    ||||| ||||||||||| |||||||||||| ||||||||| |||||||||||||||||  |||||||  |||||||| ||| ||||||||||    
T  28207649 attcttttaaaaagtcaactattacaatttccaatgcattcaatacacaacttttcattaaaaactttccatttaaaggtgcttaaagagtg 28207740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 80
Target Start/End: Complemental strand, 167928 - 167858
Alignment:
Q  10 attattctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaactta 80  Q
    |||||||| ||||||||||| |||||| ||||| ||||||||||| |||| |||||||||| |||||||||    
T  167928 attattcttttaaaaagtcaactattataatttccaatgcatttattacataacttttcatttaaaactta 167858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 10 - 98
Target Start/End: Original strand, 24695769 - 24695856
Alignment:
Q  10 attattctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaa 98  Q
    |||||| | ||||||||||| ||||||||||||  |||||| | |||||||||||||| || |||||||||  ||||||||||||||||    
T  24695769 attattattttaaaaagtcaactattacaatttctaatgcagtgaatacacaactttttat-taaaacttactatttaaagtgtttaaa 24695856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 103
Target Start/End: Complemental strand, 33949625 - 33949541
Alignment:
Q  19 ttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaagagtg 103  Q
    ||||||| ||| ||||||||||||  |||||| | |||||||||||||||||| | ||||||  | |||||||||||||||||||    
T  33949625 ttaaaaattcaactattacaatttcaaatgcactcaatacacaacttttcataaataacttactaattaaagtgtttaaagagtg 33949541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 10 - 98
Target Start/End: Original strand, 35901953 - 35902041
Alignment:
Q  10 attattctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaa 98  Q
    |||||| | |||||||||||  ||||||||||| ||||||||| |||||| ||||||||||  ||||||||| ||||||| || |||||    
T  35901953 attatttttttaaaaagtcaattattacaatttccaatgcattcaatacagaacttttcattaaaaacttattatttaaaatgcttaaa 35902041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 21 - 103
Target Start/End: Complemental strand, 9735377 - 9735295
Alignment:
Q  21 aaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaagagtg 103  Q
    ||||||||| ||||||  | ||||||| ||||||||||||||||||||||  |||| |||||||||||| | |||||| ||||    
T  9735377 aaaaagtcaactattatgactttcaatacatttaatacacaacttttcattaaaaatttatcatttaaaatatttaaaaagtg 9735295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 91
Target Start/End: Complemental strand, 36356020 - 36355960
Alignment:
Q  31 ctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagt 91  Q
    ||||| ||||||  ||||||||||||||||||||||||||  |||||||| ||||||||||    
T  36356020 ctattgcaatttctaatgcatttaatacacaacttttcattaaaaacttaccatttaaagt 36355960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 103
Target Start/End: Original strand, 45197408 - 45197492
Alignment:
Q  19 ttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaagagtg 103  Q
    ||||||||||| | ||| |||||||||||| ||| | ||| |||||||||||| |||| |||  |||||| ||||||||||||||    
T  45197408 ttaaaaagtcaacaattgcaattttcaatggattgattacccaacttttcataaaaaatttactatttaatgtgtttaaagagtg 45197492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 103
Target Start/End: Original strand, 884461 - 884531
Alignment:
Q  32 tattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaagagtg 103  Q
    ||||||||||||||||| ||||||||||||| |||||||  |||||||   |||||||||| ||||||||||    
T  884461 tattacaattttcaatg-atttaatacacaatttttcattaaaaactttcaatttaaagtgcttaaagagtg 884531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 103
Target Start/End: Original strand, 37427235 - 37427306
Alignment:
Q  32 tattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaagagtg 103  Q
    ||||||||||||||||| | | ||||| |||||||||||  ||| |||| ||||||||||| ||||||||||    
T  37427235 tattacaattttcaatgtaatcaatactcaacttttcattaaaatcttaccatttaaagtgcttaaagagtg 37427306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 37813475 - 37813425
Alignment:
Q  21 aaaaagtcagctattacaattttcaatgcatttaatacacaacttttcata 71  Q
    ||||||||| | |||||||||| ||||||||| ||||||||||||||||||    
T  37813475 aaaaagtcaaccattacaatttccaatgcattgaatacacaacttttcata 37813425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 75
Target Start/End: Original strand, 5588982 - 5589047
Alignment:
Q  10 attattctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaa 75  Q
    |||||||| ||||||||||| |||||| ||||||||||||||| | |||| || ||||||| ||||    
T  5588982 attattcttttaaaaagtcaactattataattttcaatgcattaattacaaaaattttcatttaaa 5589047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 98
Target Start/End: Complemental strand, 26745214 - 26745159
Alignment:
Q  42 ttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaa 98  Q
    ||||||| ||||||||||||| ||||||||||||| |||||||||||| | ||||||    
T  26745214 ttcaatgtatttaatacacaaattttcatataaaa-ttatcatttaaaatctttaaa 26745159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 89
Target Start/End: Original strand, 33067533 - 33067603
Alignment:
Q  19 ttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaa 89  Q
    |||||||||||  ||||||||| |  |||||||| |||||| |||||||||| |||||||||  |||||||    
T  33067533 ttaaaaagtcaattattacaatgtctaatgcattcaatacaaaacttttcatttaaaacttactatttaaa 33067603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 76
Target Start/End: Complemental strand, 39691198 - 39691132
Alignment:
Q  10 attattctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaa 76  Q
    |||||||| | |||||||||  || | |||||||||||||||| ||||||||| |||||||| ||||    
T  39691198 attattctttaaaaaagtcaaatagttcaattttcaatgcattgaatacacaaattttcataaaaaa 39691132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 91
Target Start/End: Original strand, 12954762 - 12954831
Alignment:
Q  22 aaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagt 91  Q
    |||| ||| |||||| ||||||||||  ||||||||||||| ||||||   |||| ||||||||||||||    
T  12954762 aaaaatcaactattataattttcaatagatttaatacacaatttttcaataaaaatttatcatttaaagt 12954831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 98
Target Start/End: Complemental strand, 12829955 - 12829867
Alignment:
Q  10 attattctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaa 98  Q
    |||||| | ||||||||||   ||||||||||  ||||||||| |||| | || |||||||  |||||||| ||||||||||| |||||    
T  12829955 attattattttaaaaagtctattattacaattaacaatgcattcaatatataatttttcattaaaaacttaccatttaaagtgcttaaa 12829867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 59; Significance: 4e-25; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 10 - 100
Target Start/End: Complemental strand, 19890273 - 19890183
Alignment:
Q  10 attattctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaaga 100  Q
    |||||||| ||||||||||| |||||||||||| |||||||||||||||||||||||||||  ||||||||| |||| ||||| |||||||    
T  19890273 attattcttttaaaaagtcaactattacaatttccaatgcatttaatacacaacttttcattaaaaacttattattttaagtgcttaaaga 19890183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 9449037 - 9448941
Alignment:
Q  10 attattctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaagagtgccct 107  Q
    |||||||| ||||||| ||| |||||| |||||||||| |||| |||||||||||||||||  |||||||| ||||||||||||||||||||||||||    
T  9449037 attattcttttaaaaa-tcaactattataattttcaatacattcaatacacaacttttcattaaaaacttaccatttaaagtgtttaaagagtgccct 9448941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 7673216 - 7673294
Alignment:
Q  10 attattctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaa 88  Q
    ||||||||||| |||||||| ||||||||||||||||| |||||| |||||||||||| ||||||||||||| ||||||    
T  7673216 attattctctttaaaagtcaactattacaattttcaatacatttagtacacaactttttatataaaacttattatttaa 7673294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 108
Target Start/End: Original strand, 19514893 - 19514991
Alignment:
Q  10 attattctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaagagtgcccta 108  Q
    |||||||| || |||||||| |||||| |||| |||||||| | |||| ||||||||||||||||||||||  |||||||||| |||||||||||||||    
T  19514893 attattctttttaaaagtcaactattataattatcaatgcaatgaatatacaacttttcatataaaacttacaatttaaagtgcttaaagagtgcccta 19514991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 31017392 - 31017296
Alignment:
Q  10 attattctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaagagtgccc 106  Q
    |||||||| | |||||||||  ||||  |||||||||||||||||||||||||||||||||  ||||||| |||||||||||| ||||||| |||||    
T  31017392 attattctttaaaaaagtcaaatattttaattttcaatgcatttaatacacaacttttcattaaaaacttttcatttaaagtgcttaaagaatgccc 31017296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 10 - 104
Target Start/End: Complemental strand, 1334968 - 1334874
Alignment:
Q  10 attattctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaagagtgc 104  Q
    |||||||| | ||||| ||| |||||||||||| ||||||||| |||| |||| |||||||  |||||||||||||||||||| |||||||||||    
T  1334968 attattctttaaaaaaatcaactattacaatttccaatgcattcaatatacaatttttcattaaaaacttatcatttaaagtgcttaaagagtgc 1334874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 10 - 98
Target Start/End: Complemental strand, 31452430 - 31452343
Alignment:
Q  10 attattctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaa 98  Q
    |||||||| ||||||||||| | |||||||||||||||||||| |||||||||||||| ||  ||||||||  |||||||||| |||||    
T  31452430 attattcttttaaaaagtcaacaattacaattttcaatgcattcaatacacaactttt-attaaaaacttactatttaaagtgcttaaa 31452343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 10 - 105
Target Start/End: Original strand, 15505566 - 15505661
Alignment:
Q  10 attattctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaagagtgcc 105  Q
    |||||||| | ||||||| | |||||| |||||||||| |||| |||||||||||||||||   |||||||  ||||||||||||| |||||||||    
T  15505566 attattctttcaaaaagtaaactattataattttcaatacattcaatacacaacttttcattccaaacttactatttaaagtgtttcaagagtgcc 15505661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 104
Target Start/End: Complemental strand, 34904872 - 34904778
Alignment:
Q  10 attattctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaagagtgc 104  Q
    |||||||| ||||||| ||| ||||||||||||| |||| |||||||||| || |||||||  | ||||||  |||||||||| |||||||||||    
T  34904872 attattcttttaaaaaatcaactattacaatttttaatgaatttaatacaaaatttttcattaataacttacaatttaaagtgcttaaagagtgc 34904778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 104
Target Start/End: Original strand, 41933153 - 41933247
Alignment:
Q  10 attattctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaagagtgc 104  Q
    |||||||| ||||||||||| |||||||||||||||||||| | | || ||||||||| ||| |||| |||  | |||||||| |||||||||||    
T  41933153 attattcttttaaaaagtcaactattacaattttcaatgcactcagtaaacaactttttataaaaaatttactaattaaagtgcttaaagagtgc 41933247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 10 - 71
Target Start/End: Original strand, 20064933 - 20064994
Alignment:
Q  10 attattctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcata 71  Q
    |||||||| ||||||||||| |||||||||||||||||| ||| ||||||||| ||||||||    
T  20064933 attattcttttaaaaagtcaactattacaattttcaatgtattaaatacacaatttttcata 20064994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 21 - 80
Target Start/End: Complemental strand, 11944946 - 11944888
Alignment:
Q  21 aaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaactta 80  Q
    |||| |||| |||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  11944946 aaaatgtcaactattacaattttcaatgcattgaatacacaacttttcata-aaaactta 11944888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 10 - 105
Target Start/End: Complemental strand, 33067804 - 33067709
Alignment:
Q  10 attattctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaagagtgcc 105  Q
    |||||||  |||||||||||  | |||||||||  |||| ||| ||||||||| |||| |||  ||||||||||||||||||||||||||| ||||    
T  33067804 attattcatttaaaaagtcaattgttacaatttataatgtattaaatacacaatttttaataagaaacttatcatttaaagtgtttaaagaatgcc 33067709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 10 - 119
Target Start/End: Original strand, 4762371 - 4762480
Alignment:
Q  10 attattctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaagagtgccctaa 109  Q
    |||||| | ||| ||||||| |||||| ||||||||||||||| ||||||||| |||| ||  |||| |||  |||||||||| ||||| ||||||  ||    
T  4762371 attattattttataaagtcaactattataattttcaatgcattcaatacacaattttttattaaaaatttactatttaaagtgattaaaaagtgcctcaa 4762470  T
Q  110 gaacactcgt 119  Q
    ||||| ||||    
T  4762471 gaacattcgt 4762480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 10 - 67
Target Start/End: Original strand, 14295650 - 14295707
Alignment:
Q  10 attattctcttaaaaagtcagctattacaattttcaatgcatttaatacacaactttt 67  Q
    |||||||| |||||| || | |||||||||||||||||||||| ||||||||||||||    
T  14295650 attattcttttaaaaggttaactattacaattttcaatgcattgaatacacaactttt 14295707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 103
Target Start/End: Complemental strand, 29239324 - 29239240
Alignment:
Q  19 ttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaagagtg 103  Q
    ||||||||||| |||||||||||||||||||||| ||||||| | |||||||  || | |||  | |||||||| ||||||||||    
T  29239324 ttaaaaagtcaactattacaattttcaatgcattcaatacaccatttttcattaaagatttactaattaaagtgcttaaagagtg 29239240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 12 - 100
Target Start/End: Original strand, 37993102 - 37993190
Alignment:
Q  12 tattctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaaga 100  Q
    |||||| | ||||| ||| ||||||||||||||||||||||||||||| || |||| ||  |||| |||  ||||||| ||||||||||    
T  37993102 tattctttcaaaaaatcaactattacaattttcaatgcatttaatacataattttttattaaaaatttactatttaaaatgtttaaaga 37993190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 10 - 103
Target Start/End: Complemental strand, 9173791 - 9173697
Alignment:
Q  10 attattctcttaaaaagtcagctattacaattttcaatgcatttaa-tacacaacttttcatataaaacttatcatttaaagtgtttaaagagtg 103  Q
    |||||| | ||||||| ||| ||||||||||||||||| || | || ||||||| |||||||| |||||||   | |||||||||||||||||||    
T  9173791 attatttttttaaaaaatcaactattacaattttcaatacaatcaaatacacaatttttcataaaaaacttgctaattaaagtgtttaaagagtg 9173697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 37 - 106
Target Start/End: Complemental strand, 33963000 - 33962932
Alignment:
Q  37 caattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaagagtgccc 106  Q
    |||||||||||||||| ||| ||||| |||||||| |||| |||| |||||||||  |||||||||||||    
T  33963000 caattttcaatgcattgaatgcacaatttttcata-aaaatttattatttaaagtccttaaagagtgccc 33962932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 70
Target Start/End: Complemental strand, 1299038 - 1298987
Alignment:
Q  19 ttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcat 70  Q
    ||||||||||| |||| |||||||||| || |||||||||| ||||||||||    
T  1299038 ttaaaaagtcaactatcacaattttcactgtatttaatacataacttttcat 1298987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0268 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0268
Description:

Target: scaffold0268; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 12 - 103
Target Start/End: Complemental strand, 20330 - 20240
Alignment:
Q  12 tattctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaagagtg 103  Q
    |||||| ||||||||| | ||||||||||||  |||||||| |||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  20330 tattcttttaaaaagttaactattacaatttcaaatgcattaaatacacaacttttcata-aaaacttatcatttaaagtgcttaaagagtg 20240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 55; Significance: 1e-22; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 104
Target Start/End: Original strand, 32823699 - 32823793
Alignment:
Q  10 attattctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaagagtgc 104  Q
    |||||||| || ||||||||  ||||||||||||||||||||| |||||||||||||||||  ||||||| | |||||||||| |||||||||||    
T  32823699 attattcttttgaaaagtcaattattacaattttcaatgcattcaatacacaacttttcattaaaaacttgttatttaaagtgcttaaagagtgc 32823793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 10 - 103
Target Start/End: Complemental strand, 17215767 - 17215674
Alignment:
Q  10 attattctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaagagtg 103  Q
    |||||| | ||||||||||| |||||||||||||||||||||| |||| |||| |||| ||  |||||||| ||||||||||| ||||||||||    
T  17215767 attatttttttaaaaagtcaactattacaattttcaatgcattcaataaacaattttttattaaaaacttaccatttaaagtgcttaaagagtg 17215674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 10 - 102
Target Start/End: Original strand, 1841005 - 1841097
Alignment:
Q  10 attattctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaagagt 102  Q
    |||||||| ||||||| ||| |||||||||||| ||||||||| |||||||||||||| ||  |||||||||||||||||   ||||||||||    
T  1841005 attattcttttaaaaaatcaactattacaatttccaatgcattcaatacacaacttttaattaaaaacttatcatttaaaagatttaaagagt 1841097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 10 - 92
Target Start/End: Original strand, 3766299 - 3766381
Alignment:
Q  10 attattctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtg 92  Q
    |||||||| |||||||||||  |||||||||||  ||| |||| | |||| ||||||||||||||||||||||||||||||||    
T  3766299 attattcttttaaaaagtcaattattacaatttataatacattcattacataacttttcatataaaacttatcatttaaagtg 3766381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 19 - 128
Target Start/End: Original strand, 7421703 - 7421812
Alignment:
Q  19 ttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaac-ttatcatttaaagtgtttaaagagtgccctaagaacactc 117  Q
    |||||||||||  |||||||||||||||||||||||||||||||||||| | ||||||| |||  |||||||||| |||||||||| |  | ||||||||    
T  7421703 ttaaaaagtcaaatattacaattttcaatgcatttaatacacaacttttta-ataaaactttactatttaaagtgcttaaagagtgtcacaggaacactc 7421801  T
Q  118 gtcgacatttt 128  Q
    ||  |||||||    
T  7421802 gttaacatttt 7421812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 31855085 - 31855168
Alignment:
Q  19 ttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaagagt 102  Q
    ||||||||||| |||||||||||| ||||||||| |||| |||| |||||||  ||||||||  |||||||||| |||||||||    
T  31855085 ttaaaaagtcaactattacaatttccaatgcattcaatatacaatttttcattaaaaacttactatttaaagtgcttaaagagt 31855168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 13 - 106
Target Start/End: Complemental strand, 1479173 - 1479081
Alignment:
Q  13 attctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaagagtgccc 106  Q
    ||||| |||||||| ||  ||| ||||||||||||||||| ||||||||| ||| |||| |||| ||| ||||||||||| |||||||||||||    
T  1479173 attcttttaaaaaggcaattatgacaattttcaatgcattgaatacacaattttacata-aaaatttaccatttaaagtgcttaaagagtgccc 1479081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 31 - 103
Target Start/End: Original strand, 2864919 - 2864992
Alignment:
Q  31 ctattacaattttcaatgcatttaatacacaacttttcat-ataaaacttatcatttaaagtgtttaaagagtg 103  Q
    |||||||||||| ||||||||| ||||||||| ||||||| | |||||||| |||||||| |||||||||||||    
T  2864919 ctattacaatttacaatgcattaaatacacaatttttcatcaaaaaacttaccatttaaaatgtttaaagagtg 2864992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 10 - 70
Target Start/End: Complemental strand, 26669363 - 26669303
Alignment:
Q  10 attattctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcat 70  Q
    |||||||| ||||||||||| ||||||||||||||| || |||||||||| ||||||||||    
T  26669363 attattcttttaaaaagtcaactattacaattttcactgtatttaatacataacttttcat 26669303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 31 - 103
Target Start/End: Original strand, 2884130 - 2884205
Alignment:
Q  31 ctattacaattttcaatgcatttaatacacaacttttcat---ataaaacttatcatttaaagtgtttaaagagtg 103  Q
    |||||||||||| ||||||||| ||||||||| |||||||   | |||||||| |||||||| |||||||||||||    
T  2884130 ctattacaatttacaatgcattaaatacacaatttttcataaaaaaaaacttaccatttaaaatgtttaaagagtg 2884205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 106
Target Start/End: Original strand, 12132576 - 12132644
Alignment:
Q  37 caattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaagagtgccc 106  Q
    |||||||||||||||||||||||||| ||||||||  ||||||| | || || |||||||||||||||||    
T  12132576 caattttcaatgcatttaatacacaaattttcata-gaaacttacctttaaaggtgtttaaagagtgccc 12132644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 104
Target Start/End: Original strand, 27778786 - 27778869
Alignment:
Q  19 ttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaagagtgc 104  Q
    ||||||||||| | |||| ||||||||||||||| ||||||| | |||||||| |||| ||| ||||||||||| |||||||||||    
T  27778786 ttaaaaagtcaacgattataattttcaatgcattcaatacac-atttttcata-aaaatttaccatttaaagtgcttaaagagtgc 27778869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 106
Target Start/End: Complemental strand, 34232012 - 34231944
Alignment:
Q  37 caattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaagagtgccc 106  Q
    |||||||||||| |||||||||||||||||||||  | ||||| |||||||||| | |||||||||||||    
T  34232012 caattttcaatgtatttaatacacaacttttcattaagaactt-tcatttaaagggcttaaagagtgccc 34231944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 10 - 98
Target Start/End: Complemental strand, 2692514 - 2692427
Alignment:
Q  10 attattctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaa 98  Q
    |||||| | ||||||||||| |||||||||||| ||||| | | |||||||||||||| || ||||| |||  ||||||||||||||||    
T  2692514 attattattttaaaaagtcaactattacaatttccaatgaagtgaatacacaactttttat-taaaatttactatttaaagtgtttaaa 2692427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 9 - 106
Target Start/End: Original strand, 9762823 - 9762921
Alignment:
Q  9 tattattctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatat-aaaacttatcatttaaagtgtttaaagagtgccc 106  Q
    |||| |||| |||||||||||  ||||| |||||  ||| |||| | ||||||||||||||| | |||| ||| ||||||||||| |||||||||||||    
T  9762823 tatttttcttttaaaaagtcaattattataatttctaatacattcagtacacaacttttcatttaaaaatttaccatttaaagtgattaaagagtgccc 9762921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 104
Target Start/End: Original strand, 18737807 - 18737879
Alignment:
Q  32 tattacaattttcaatgcatttaatacacaacttttcatataa-aacttatcatttaaagtgtttaaagagtgc 104  Q
    ||||||||||||||||||||| |||| |||| |||| ||| || ||||||  ||||||||||||||||||||||    
T  18737807 tattacaattttcaatgcattaaata-acaattttttataaaataacttacaatttaaagtgtttaaagagtgc 18737879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 103
Target Start/End: Original strand, 23399132 - 23399225
Alignment:
Q  10 attattctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaagagtg 103  Q
    |||||||| ||||||||| | |||||| ||||||||||| |||   | || ||||||| ||||||||||||  |||||||||  ||||||||||    
T  23399132 attattcttttaaaaagttaactattataattttcaatgtattcgttgcataacttttaatataaaacttaatatttaaagtacttaaagagtg 23399225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 102
Target Start/End: Complemental strand, 1371248 - 1371157
Alignment:
Q  10 attattctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaagagt 102  Q
    |||||||| ||||||||||| ||   ||||||||||||||||| |||| || | |||||||| ||||| || | |||||||||||| ||||||    
T  1371248 attattcttttaaaaagtcaacttccacaattttcaatgcattgaatatacgatttttcata-aaaacctaccttttaaagtgttttaagagt 1371157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 30801785 - 30801853
Alignment:
Q  32 tattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaaga 100  Q
    ||||| ||||||||||||||| |||||||||||||| ||  |||||||   |||||||||| |||||||    
T  30801785 tattataattttcaatgcattcaatacacaacttttaattaaaaacttgctatttaaagtgcttaaaga 30801853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 60
Target Start/End: Complemental strand, 34235462 - 34235412
Alignment:
Q  10 attattctcttaaaaagtcagctattacaattttcaatgcatttaatacac 60  Q
    |||||||| ||||||| | | ||||||||||||||||| ||||||||||||    
T  34235462 attattcttttaaaaaattaactattacaattttcaatacatttaatacac 34235412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 91
Target Start/End: Complemental strand, 24103841 - 24103781
Alignment:
Q  31 ctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagt 91  Q
    ||||||||||||| |||| ||||||||||||| |||| ||  |||| |||| |||||||||    
T  24103841 ctattacaatttttaatgaatttaatacacaatttttaattaaaaatttattatttaaagt 24103781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 55; Significance: 1e-22; HSPs: 27)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 104
Target Start/End: Original strand, 2864165 - 2864258
Alignment:
Q  10 attattctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaagagtgc 104  Q
    |||||||| ||||||||||| |||||||||||| ||||||||| |||||||||||||||||  ||||||||  |||||||||| |||||||||||    
T  2864165 attattct-ttaaaaagtcaactattacaatttccaatgcattcaatacacaacttttcattaaaaacttactatttaaagtgcttaaagagtgc 2864258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 19 - 104
Target Start/End: Complemental strand, 43397090 - 43397005
Alignment:
Q  19 ttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaagagtgc 104  Q
    ||||||||||| |||||| ||||| |||||||||||||||||||||||||||  ||||||||  ||||||||||||||| ||||||    
T  43397090 ttaaaaagtcaactattataatttccaatgcatttaatacacaacttttcattaaaaacttactatttaaagtgtttaacgagtgc 43397005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 10 - 105
Target Start/End: Complemental strand, 38748805 - 38748710
Alignment:
Q  10 attattctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaagagtgcc 105  Q
    |||||||| ||||||||||| |||||| ||||||||||||| | |||||||||||||||||| | ||||||  | |||||||| ||||||||||||    
T  38748805 attattcttttaaaaagtcaactattataattttcaatgcactcaatacacaacttttcataaataacttactaattaaagtgcttaaagagtgcc 38748710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 21 - 102
Target Start/End: Complemental strand, 6883201 - 6883120
Alignment:
Q  21 aaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaagagt 102  Q
    ||||| ||| ||||||||||||  |||||||| | |||| |||||||||||||||| |||||||||||||||||||||||||    
T  6883201 aaaaaatcaactattacaatttcaaatgcattcattacataacttttcatataaaatttatcatttaaagtgtttaaagagt 6883120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 138
Target Start/End: Original strand, 31889196 - 31889313
Alignment:
Q  22 aaaagtcagctattacaattttcaatgcatttaatacacaac-ttttcatataaaacttatcatttaaagtgtttaaagagtgccctaagaacactcgtc 120  Q
    |||||||| ||||||| ||||  ||||||||||||||||||| |||||||  |||||||| |||||||| || ||||||||||| |||  |||||||||     
T  31889196 aaaagtcaactattacgatttctaatgcatttaatacacaactttttcattaaaaacttaccatttaaaatgcttaaagagtgcactagaaacactcgtt 31889295  T
Q  121 gacattttctaattttaa 138  Q
     |||||||| | ||||||    
T  31889296 aacattttccatttttaa 31889313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 21 - 100
Target Start/End: Original strand, 36563737 - 36563814
Alignment:
Q  21 aaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaaga 100  Q
    |||| |||| |||||| ||||||||||||||| ||||||||| |||||||| ||||||  ||||||||||||||||||||    
T  36563737 aaaacgtcaactattataattttcaatgcattaaatacacaatttttcataaaaaact--tcatttaaagtgtttaaaga 36563814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 10 - 103
Target Start/End: Complemental strand, 47187905 - 47187812
Alignment:
Q  10 attattctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaagagtg 103  Q
    |||||||  ||||||| ||| |||||| ||||| ||||||||| |||||| || |||||||  |||||||| ||||| ||||||||||||||||    
T  47187905 attattcatttaaaaaatcaactattataatttccaatgcattcaatacataatttttcattaaaaacttaccattttaagtgtttaaagagtg 47187812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 10 - 98
Target Start/End: Complemental strand, 32562437 - 32562350
Alignment:
Q  10 attattctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaa 98  Q
    |||||| | ||||||| ||| |||||||||||||||||||| | ||||||||| |||| ||| ||||||||  ||||||||||||||||    
T  32562437 attattattttaaaaattcaactattacaattttcaatgcagtgaatacacaattttttata-aaaacttactatttaaagtgtttaaa 32562350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 10 - 66
Target Start/End: Complemental strand, 34232791 - 34232735
Alignment:
Q  10 attattctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttt 66  Q
    |||||||| ||||||||||| ||||||||||||||||||| || |||||||||||||    
T  34232791 attattcttttaaaaagtcaactattacaattttcaatgctttcaatacacaacttt 34232735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 39150604 - 39150700
Alignment:
Q  10 attattctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaagagtgccc 106  Q
    ||||||||  |||||||||| |||||||||||| ||||||||| |||||| || |||||||  ||| ||||  | |||||||| |||||||||||||    
T  39150604 attattcttgtaaaaagtcaactattacaatttacaatgcattcaatacataaattttcattaaaatcttactagttaaagtgcttaaagagtgccc 39150700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 10 - 105
Target Start/End: Complemental strand, 14746284 - 14746189
Alignment:
Q  10 attattctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaagagtgcc 105  Q
    |||||| ||||||||| ||| || ||| ||||||||||||  | |||||||||||||||||||| ||||||  | |||||||| || |||||||||    
T  14746284 attattttcttaaaaaatcaactgttataattttcaatgctatgaatacacaacttttcatatagaacttactaattaaagtgcttgaagagtgcc 14746189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 100
Target Start/End: Original strand, 44329618 - 44329708
Alignment:
Q  10 attattctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaaga 100  Q
    |||||||| ||||||||||| |||||| ||||||||||||||| |||||| || |||| |   |||||||   ||||||||||||||||||    
T  44329618 attattcttttaaaaagtcaactattataattttcaatgcattcaatacataattttttactaaaaactttctatttaaagtgtttaaaga 44329708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 10 - 102
Target Start/End: Complemental strand, 4851328 - 4851237
Alignment:
Q  10 attattctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaagagt 102  Q
    |||||||| ||||||||||| ||||||||||||  |||||| ||| ||| |||||||||||| | ||||||  | |||||||| |||||||||    
T  4851328 attattct-ttaaaaagtcaactattacaatttcaaatgcacttactacccaacttttcataaagaacttactaattaaagtgcttaaagagt 4851237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 10 - 70
Target Start/End: Original strand, 38491243 - 38491303
Alignment:
Q  10 attattctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcat 70  Q
    |||||| | ||||||||||| |||||||||||| ||||||||| ||||||||| |||||||    
T  38491243 attattatgttaaaaagtcaactattacaatttacaatgcattcaatacacaatttttcat 38491303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 104
Target Start/End: Original strand, 3982298 - 3982380
Alignment:
Q  21 aaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaagagtgc 104  Q
    ||||||||| |||||| |||||  |||||||| |||| ||||||||| ||| |||| |||  ||||||||||||||||||||||    
T  3982298 aaaaagtcaactattataatttataatgcattgaatagacaacttttaata-aaaatttactatttaaagtgtttaaagagtgc 3982380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 10 - 76
Target Start/End: Original strand, 8794438 - 8794504
Alignment:
Q  10 attattctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaa 76  Q
    |||||||| ||||||||||| |||||| ||||||||||||| |  ||||||||||||| ||| ||||    
T  8794438 attattcttttaaaaagtcaactattataattttcaatgcactccatacacaactttttataaaaaa 8794504  T

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Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 103
Target Start/End: Original strand, 7212795 - 7212883
Alignment:
Q  10 attattctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaagagtg 103  Q
    ||||| || ||||||||| | | |||||||||| |||||||||     |||||||||| || |||||||||  |||||||||||||||||||||    
T  7212795 attatacttttaaaaagttaacaattacaatttccaatgcatt-----cacaactttttatttaaaacttacaatttaaagtgtttaaagagtg 7212883  T

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Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 67
Target Start/End: Original strand, 39156283 - 39156340
Alignment:
Q  10 attattctcttaaaaagtcagctattacaattttcaatgcatttaatacacaactttt 67  Q
    |||||||| ||||||||||| ||| |||||||| ||||||||| ||||||||| ||||    
T  39156283 attattcttttaaaaagtcaactactacaatttccaatgcattcaatacacaattttt 39156340  T

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Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 103
Target Start/End: Original strand, 44329486 - 44329579
Alignment:
Q  10 attattctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaagagtg 103  Q
    |||||||| |||||||||||  ||||| |||||||| ||||||||||| | ||||||| ||  |||| ||   |||||||||| ||||||||||    
T  44329486 attattcttttaaaaagtcaattattataattttcagtgcatttaatatataactttttattaaaaattttatatttaaagtgcttaaagagtg 44329579  T

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Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 103
Target Start/End: Original strand, 44829294 - 44829386
Alignment:
Q  10 attattctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaagagtg 103  Q
    |||||||| | |||| |||| ||||||||||||| ||| |||| |||||||||||||| || ||||||||| |  |||||||  ||||||||||    
T  44829294 attattctttaaaaaggtcaactattacaatttttaatacattcaatacacaactttttat-taaaacttaccgattaaagtacttaaagagtg 44829386  T

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Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 100
Target Start/End: Complemental strand, 30822860 - 30822770
Alignment:
Q  10 attattctcttaaaaagtcagctattacaattttcaatgcatttaatacacaactt-ttcatataaaacttatcatttaaagtgtttaaaga 100  Q
    |||||||||||||||||| |  |||||||||||||| |||||| || |||||| || || ||| |||| ||| ||||||||||| |||||||    
T  30822860 attattctcttaaaaagttaattattacaattttcattgcattgaaaacacaatttatttata-aaaatttaccatttaaagtgcttaaaga 30822770  T

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Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 89
Target Start/End: Complemental strand, 42791226 - 42791147
Alignment:
Q  10 attattctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaa 89  Q
    |||||| | ||||||||||| |||| || ||||| |||||||| |||||||| ||||| |||||||| |||  |||||||    
T  42791226 attatttttttaaaaagtcaactatcactattttaaatgcattcaatacacagctttttatataaaatttactatttaaa 42791147  T

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Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 103
Target Start/End: Original strand, 45640571 - 45640661
Alignment:
Q  12 tattctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaagagtg 103  Q
    |||||| | |||||||||  ||||| ||||||||||||||| | ||||||| |||||||  ||||||||  ||||||| || ||||||||||    
T  45640571 tattctttcaaaaagtcaattattataattttcaatgcattcattacacaa-ttttcatcaaaaacttactatttaaaatgcttaaagagtg 45640661  T

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Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 100
Target Start/End: Original strand, 8365525 - 8365615
Alignment:
Q  10 attattctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaaga 100  Q
    |||||||| ||||||| ||| |||||||||| ||||||||||| ||||||  | ||||||   ||||||||  ||||||  ||||||||||    
T  8365525 attattcttttaaaaaatcaactattacaatcttcaatgcattcaatacatcatttttcaataaaaacttactatttaacatgtttaaaga 8365615  T

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Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 60
Target Start/End: Complemental strand, 39914685 - 39914639
Alignment:
Q  14 ttctcttaaaaagtcagctattacaattttcaatgcatttaatacac 60  Q
    |||| ||||||||||| |||||||||||||||||||| | |||||||    
T  39914685 ttcttttaaaaagtcaactattacaattttcaatgcactcaatacac 39914639  T

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Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 98
Target Start/End: Complemental strand, 2995055 - 2994968
Alignment:
Q  10 attattctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaa 98  Q
    |||||| | ||||||||| | |||||| ||||||||||    | |||||||||||||| ||| ||||||||  ||||||||||||||||    
T  2995055 attattattttaaaaagtaaactattataattttcaattttgtaaatacacaactttttata-aaaacttactatttaaagtgtttaaa 2994968  T

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Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 98
Target Start/End: Original strand, 8043938 - 8043982
Alignment:
Q  54 aatacacaacttttcatataaaacttatcatttaaagtgtttaaa 98  Q
    ||||||||| ||||||||||||| ||| |||||||||| ||||||    
T  8043938 aatacacaatttttcatataaaatttaccatttaaagtatttaaa 8043982  T

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Target: scaffold0036 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 10 - 102
Target Start/End: Complemental strand, 62609 - 62517
Alignment:
Q  10 attattctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaagagt 102  Q
    |||||||| ||||||||||| ||||||| |||||||||||||| |||||| || |||| ||  ||||||||  |||||||||| |||||||||    
T  62609 attattcttttaaaaagtcaactattacgattttcaatgcattcaatacataattttttattaaaaacttactatttaaagtgcttaaagagt 62517  T

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Target: scaffold0119 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 10 - 70
Target Start/End: Original strand, 1430 - 1490
Alignment:
Q  10 attattctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcat 70  Q
    |||||||| ||||||||||| ||||||||||||||| || |||||||||| ||||||||||    
T  1430 attattcttttaaaaagtcaactattacaattttcactgtatttaatacataacttttcat 1490  T

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Target: scaffold1444 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold1444
Description:

Target: scaffold1444; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 14 - 76
Target Start/End: Complemental strand, 1012 - 950
Alignment:
Q  14 ttctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaa 76  Q
    |||| ||||||||||| |||||||||||||||||| ||| |||||||| ||||||||| ||||    
T  1012 ttcttttaaaaagtcaactattacaattttcaatgtattgaatacacatcttttcataaaaaa 950  T

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Target: scaffold1444; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 71
Target Start/End: Complemental strand, 1786 - 1727
Alignment:
Q  12 tattctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcata 71  Q
    |||||| |||||||| || |||||||||||| ||||||||| ||| ||||||||||||||    
T  1786 tattcttttaaaaagccaactattacaatttccaatgcattgaatgcacaacttttcata 1727  T

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Target: scaffold0003 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 10 - 104
Target Start/End: Complemental strand, 103733 - 103639
Alignment:
Q  10 attattctcttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcatataaaacttatcatttaaagtgtttaaagagtgc 104  Q
    |||||||| ||||||||||   |||||||||||| |||||||| |||| |||| |||||||  |||| |||| |||| || || |||||||||||    
T  103733 attattcttttaaaaagtcgaatattacaatttttaatgcattcaatatacaatttttcattaaaaatttattattttaaatgcttaaagagtgc 103639  T

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Target: scaffold0204 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 25109 - 25193
Alignment:
Q  19 ttaaaaagtcagctattacaattttcaatgcatttaatacacaacttttcat-ataaaacttatcatttaaagtgtttaaagagt 102  Q
    ||||||| ||| |||||||||||||||||||||| | ||| ||| |||| || | ||||||||  ||||||| || |||||||||    
T  25109 ttaaaaaatcaactattacaattttcaatgcattgattactcaattttttataaaaaaacttactatttaaaatgcttaaagagt 25193  T

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