View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20396_low_7 (Length: 293)
Name: NF20396_low_7
Description: NF20396
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20396_low_7 |
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Alignment Details
Target: chr4 (Bit Score: 239; Significance: 1e-132; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 1 - 247
Target Start/End: Original strand, 42446905 - 42447151
Alignment:
| Q |
1 |
acaaattacattgggattaaaatgctcatgataattatgcctcgccagaaatatgcatggatagatacaagatactttggtctctatcattatcagcaac |
100 |
Q |
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| T |
42446905 |
acaaattacattgggattaaaatgctcatgataattatgcctcgccagaaatatgcatggatagatacaagatactttggtatctatcattatcagcaac |
42447004 |
T |
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| Q |
101 |
tttccagatagcccaatatacaagactgtttaatatatttgttagaccatcaattttaaagatgtttaaagtttaaacactgaagtttaatttacaatat |
200 |
Q |
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| T |
42447005 |
tttccagatagcccaatatacaagactgtttaatatatttgttagaccatcaattttaaagatgtttaaagtttaaacactgaagtttaatttacaatat |
42447104 |
T |
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| Q |
201 |
cttcgttaataaagatttagcaaaatgtaaagatactgattagagta |
247 |
Q |
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| T |
42447105 |
cttcgttaataaagatttagcaaaatgtaaagataatgattagagta |
42447151 |
T |
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