View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20397_high_7 (Length: 306)
Name: NF20397_high_7
Description: NF20397
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20397_high_7 |
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Alignment Details
Target: chr4 (Bit Score: 259; Significance: 1e-144; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 1 - 290
Target Start/End: Complemental strand, 24260976 - 24260686
Alignment:
| Q |
1 |
ttataaactcatgatcaccgataactatcttcaaaattggataaagtgaggtgatatat-ggaaaccatgtacgacctaatcagacatgttattaaaaac |
99 |
Q |
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| T |
24260976 |
ttataaactcatgatcaccgataactatcttcaaaattggataaagtgaggtgatatattggaaaccatgtacgacctaatcagacatgttattaaaaac |
24260877 |
T |
|
| Q |
100 |
tataaaattagaaatcattgtatcacatcatgatataatgtcgaatagatatgccataaaatggacattaattcatgataaacttctgaactgcaacaaa |
199 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24260876 |
tataaaattagaaatcattgtatcacatcatgatataatgtcgaatagatatgccataaaatggacattaattcatgataaacttctgaactgcaacaaa |
24260777 |
T |
|
| Q |
200 |
gaagtttaaacactaaaactacgataacactgtcactacacaattttaatagaaaatacttaaagctaatgtaagttcgaaaacaacagaa |
290 |
Q |
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||| |||||||||||||||| ||| |||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| |
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| T |
24260776 |
gaaatttaaacactaaaactgcgacaacactatcactacgcaattttaaaagaaaatacttaaagctaatgtaagttcgaaaacaacagaa |
24260686 |
T |
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