View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20397_low_5 (Length: 502)

Name: NF20397_low_5
Description: NF20397
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20397_low_5
NF20397_low_5
[»] chr1 (42 HSPs)
chr1 (1-227)||(8138602-8138825)
chr1 (99-363)||(10136207-10136464)
chr1 (99-363)||(25844638-25844895)
chr1 (299-417)||(8138451-8138578)
chr1 (101-274)||(16648591-16648764)
chr1 (99-274)||(26926686-26926854)
chr1 (129-274)||(38622151-38622298)
chr1 (143-363)||(51040522-51040735)
chr1 (132-274)||(16036568-16036712)
chr1 (132-274)||(23191829-23191971)
chr1 (178-372)||(11807091-11807279)
chr1 (132-367)||(19797984-19798214)
chr1 (132-274)||(40166902-40167046)
chr1 (185-274)||(12260938-12261028)
chr1 (416-483)||(16649546-16649613)
chr1 (416-474)||(33301113-33301171)
chr1 (152-242)||(46697309-46697399)
chr1 (418-474)||(25843860-25843916)
chr1 (416-479)||(8138038-8138101)
chr1 (416-478)||(10135556-10135618)
chr1 (234-363)||(10140975-10141095)
chr1 (416-474)||(19798946-19799004)
chr1 (299-367)||(38621589-38621657)
chr1 (420-474)||(38620796-38620850)
chr1 (136-274)||(39586076-39586212)
chr1 (417-474)||(3094192-3094249)
chr1 (99-188)||(5100132-5100220)
chr1 (417-466)||(18784491-18784540)
chr1 (180-274)||(39199805-39199905)
chr1 (99-146)||(39199733-39199780)
chr1 (422-474)||(23192757-23192809)
chr1 (299-339)||(33300412-33300452)
chr1 (38-97)||(7670872-7670930)
chr1 (38-97)||(7709094-7709152)
chr1 (38-97)||(7709416-7709474)
chr1 (234-330)||(47450287-47450375)
chr1 (439-472)||(10140195-10140228)
chr1 (422-479)||(16833583-16833640)
chr1 (422-483)||(28434513-28434574)
chr1 (422-474)||(26927661-26927713)
chr1 (422-474)||(39588306-39588358)
chr1 (422-474)||(47451164-47451216)
[»] chr2 (51 HSPs)
chr2 (99-363)||(17974308-17974565)
chr2 (98-367)||(12797806-12798070)
chr2 (99-363)||(30651796-30652053)
chr2 (98-274)||(18345378-18345556)
chr2 (99-367)||(25496341-25496603)
chr2 (99-274)||(17967921-17968098)
chr2 (99-363)||(19891464-19891719)
chr2 (99-274)||(9184374-9184552)
chr2 (98-363)||(9179682-9179941)
chr2 (98-367)||(29678555-29678818)
chr2 (99-367)||(25477246-25477508)
chr2 (99-367)||(12361129-12361384)
chr2 (101-274)||(19896912-19897085)
chr2 (101-259)||(20101609-20101769)
chr2 (99-337)||(24536973-24537212)
chr2 (98-223)||(1933965-1934092)
chr2 (182-272)||(40846622-40846714)
chr2 (132-274)||(28604048-28604191)
chr2 (178-273)||(15446319-15446416)
chr2 (132-274)||(31329024-31329168)
chr2 (132-274)||(31335745-31335889)
chr2 (416-486)||(29677473-29677543)
chr2 (132-274)||(42925666-42925808)
chr2 (416-474)||(12797029-12797087)
chr2 (416-474)||(29677871-29677929)
chr2 (200-274)||(44630508-44630582)
chr2 (416-472)||(1934926-1934982)
chr2 (416-479)||(19094427-19094490)
chr2 (417-472)||(30658369-30658424)
chr2 (99-158)||(40846478-40846537)
chr2 (416-474)||(25497259-25497316)
chr2 (416-474)||(31326843-31326900)
chr2 (178-274)||(25637801-25637898)
chr2 (417-468)||(17453513-17453564)
chr2 (417-472)||(10160659-10160713)
chr2 (416-474)||(9180657-9180715)
chr2 (416-474)||(9189736-9189794)
chr2 (299-337)||(12002056-12002094)
chr2 (422-479)||(19892405-19892462)
chr2 (422-483)||(28603398-28603459)
chr2 (217-274)||(34495183-34495240)
chr2 (422-474)||(18344535-18344587)
chr2 (299-346)||(20103260-20103307)
chr2 (416-483)||(21523658-21523720)
chr2 (423-474)||(35602026-35602077)
chr2 (416-474)||(25478231-25478288)
chr2 (301-367)||(40846735-40846801)
chr2 (427-468)||(30631692-30631733)
chr2 (420-481)||(32079476-32079537)
chr2 (422-474)||(7737790-7737842)
chr2 (422-474)||(30651033-30651085)
[»] chr5 (60 HSPs)
chr5 (99-363)||(26668160-26668417)
chr5 (99-363)||(26939757-26940014)
chr5 (99-363)||(6154389-6154647)
chr5 (98-346)||(29166929-29167170)
chr5 (93-363)||(37247750-37248014)
chr5 (99-363)||(37536894-37537152)
chr5 (98-274)||(7452717-7452895)
chr5 (99-363)||(37646012-37646271)
chr5 (99-274)||(36424600-36424777)
chr5 (99-367)||(20180112-20180369)
chr5 (99-274)||(36430480-36430655)
chr5 (100-274)||(10759320-10759495)
chr5 (99-363)||(39519277-39519524)
chr5 (100-346)||(12103952-12104183)
chr5 (99-363)||(39523916-39524163)
chr5 (132-274)||(35678888-35679032)
chr5 (182-274)||(40148805-40148897)
chr5 (113-229)||(23757135-23757253)
chr5 (113-229)||(23822591-23822709)
chr5 (178-274)||(17162818-17162917)
chr5 (178-274)||(17159338-17159437)
chr5 (132-273)||(23689034-23689177)
chr5 (132-264)||(4872854-4872988)
chr5 (416-474)||(20180996-20181054)
chr5 (417-483)||(32461483-32461549)
chr5 (153-263)||(6511614-6511726)
chr5 (205-274)||(16115294-16115363)
chr5 (99-190)||(40150243-40150334)
chr5 (417-474)||(3666036-3666093)
chr5 (422-483)||(12041871-12041932)
chr5 (132-274)||(9725763-9725901)
chr5 (416-472)||(37248729-37248784)
chr5 (416-479)||(41587095-41587156)
chr5 (422-472)||(7451864-7451914)
chr5 (422-472)||(39523155-39523205)
chr5 (422-479)||(556794-556851)
chr5 (422-479)||(561566-561623)
chr5 (417-474)||(12045073-12045130)
chr5 (97-150)||(25668154-25668207)
chr5 (417-474)||(36937445-36937502)
chr5 (417-474)||(36942199-36942256)
chr5 (422-474)||(6155358-6155410)
chr5 (422-474)||(12501838-12501890)
chr5 (423-483)||(16116189-16116249)
chr5 (434-477)||(9726638-9726681)
chr5 (416-475)||(10759754-10759812)
chr5 (420-474)||(12103129-12103183)
chr5 (422-472)||(39518516-39518566)
chr5 (422-474)||(11981219-11981271)
chr5 (422-474)||(29167912-29167964)
chr5 (422-468)||(15414820-15414866)
chr5 (301-339)||(16115381-16115419)
chr5 (422-472)||(26667378-26667428)
chr5 (422-472)||(26938975-26939025)
chr5 (416-474)||(35679809-35679866)
chr5 (417-474)||(41996769-41996821)
chr5 (417-474)||(42001538-42001590)
chr5 (299-339)||(6511780-6511820)
chr5 (422-474)||(36428813-36428865)
chr5 (199-263)||(40567661-40567725)
[»] chr3 (54 HSPs)
chr3 (99-367)||(20520838-20521100)
chr3 (98-344)||(18472907-18473146)
chr3 (99-367)||(14437650-14437909)
chr3 (99-274)||(757321-757497)
chr3 (99-363)||(7570172-7570429)
chr3 (99-363)||(23660446-23660703)
chr3 (99-363)||(23665078-23665335)
chr3 (98-344)||(12970764-12971006)
chr3 (99-363)||(18468094-18468351)
chr3 (98-367)||(46964890-46965152)
chr3 (115-274)||(55326739-55326899)
chr3 (99-274)||(27709893-27710067)
chr3 (132-274)||(3656247-3656391)
chr3 (99-261)||(20175368-20175529)
chr3 (205-344)||(39774890-39775020)
chr3 (416-483)||(55431408-55431475)
chr3 (132-274)||(55432189-55432330)
chr3 (416-472)||(758301-758357)
chr3 (120-274)||(12964860-12965018)
chr3 (416-472)||(14438628-14438684)
chr3 (416-472)||(27709040-27709096)
chr3 (104-171)||(32473106-32473173)
chr3 (93-262)||(3426047-3426215)
chr3 (422-479)||(7571157-7571214)
chr3 (422-483)||(25726727-25726788)
chr3 (299-367)||(3419870-3419938)
chr3 (153-332)||(12111605-12111769)
chr3 (416-472)||(23661397-23661453)
chr3 (416-472)||(23666056-23666112)
chr3 (416-472)||(24038304-24038360)
chr3 (417-472)||(8883274-8883329)
chr3 (416-483)||(20520147-20520214)
chr3 (179-258)||(7860686-7860767)
chr3 (416-474)||(29350342-29350400)
chr3 (416-472)||(49971357-49971413)
chr3 (417-472)||(8069783-8069838)
chr3 (417-472)||(8888034-8888089)
chr3 (416-479)||(46964112-46964175)
chr3 (416-474)||(2207682-2207740)
chr3 (417-479)||(3033741-3033803)
chr3 (200-274)||(29351189-29351263)
chr3 (417-474)||(3672688-3672745)
chr3 (417-474)||(3692720-3692777)
chr3 (132-214)||(38891139-38891222)
chr3 (420-483)||(3657177-3657240)
chr3 (420-478)||(55325874-55325932)
chr3 (299-346)||(55432125-55432172)
chr3 (417-463)||(6596291-6596337)
chr3 (422-479)||(39775667-39775724)
chr3 (416-472)||(3419099-3419155)
chr3 (422-474)||(12965812-12965864)
chr3 (422-474)||(12971572-12971624)
chr3 (422-474)||(18472109-18472161)
chr3 (426-474)||(32474623-32474671)
[»] chr7 (56 HSPs)
chr7 (95-363)||(26342089-26342348)
chr7 (99-367)||(3046451-3046712)
chr7 (99-372)||(21672078-21672343)
chr7 (99-367)||(12256899-12257160)
chr7 (99-270)||(4931189-4931362)
chr7 (99-344)||(3880868-3881110)
chr7 (129-367)||(42625565-42625802)
chr7 (199-372)||(12181811-12181979)
chr7 (107-244)||(44508261-44508400)
chr7 (103-230)||(2595776-2595905)
chr7 (135-274)||(13313307-13313448)
chr7 (137-274)||(23247554-23247692)
chr7 (99-272)||(10392044-10392221)
chr7 (99-224)||(12802295-12802421)
chr7 (132-274)||(26286146-26286292)
chr7 (139-256)||(23151683-23151804)
chr7 (416-474)||(44423070-44423128)
chr7 (418-474)||(4930337-4930393)
chr7 (416-486)||(12799502-12799572)
chr7 (416-486)||(42626524-42626594)
chr7 (152-274)||(4580427-4580551)
chr7 (417-474)||(25543296-25543353)
chr7 (299-367)||(27239032-27239100)
chr7 (416-479)||(3284827-3284890)
chr7 (416-483)||(4579603-4579670)
chr7 (201-367)||(10387410-10387570)
chr7 (417-472)||(23866174-23866229)
chr7 (224-367)||(8269177-8269312)
chr7 (417-472)||(44510611-44510666)
chr7 (416-474)||(10388300-10388358)
chr7 (221-367)||(12800267-12800405)
chr7 (422-483)||(13142840-13142901)
chr7 (299-367)||(10392241-10392309)
chr7 (206-272)||(9814941-9815008)
chr7 (206-272)||(10716866-10716933)
chr7 (299-346)||(23247891-23247938)
chr7 (416-483)||(30258195-30258262)
chr7 (132-260)||(30259238-30259368)
chr7 (416-474)||(3880099-3880157)
chr7 (417-474)||(9008267-9008324)
chr7 (423-472)||(9650904-9650953)
chr7 (422-479)||(13314175-13314232)
chr7 (299-344)||(16373248-16373293)
chr7 (299-344)||(27246697-27246742)
chr7 (422-474)||(26287084-26287136)
chr7 (299-346)||(2595724-2595771)
chr7 (299-338)||(6590164-6590203)
chr7 (416-483)||(6590916-6590983)
chr7 (416-483)||(27238337-27238404)
chr7 (416-474)||(23246866-23246924)
chr7 (422-483)||(12254174-12254235)
chr7 (152-196)||(8269350-8269394)
chr7 (299-339)||(9815027-9815067)
chr7 (299-339)||(10716952-10716992)
chr7 (430-474)||(21671299-21671343)
chr7 (238-274)||(44508427-44508463)
[»] chr4 (62 HSPs)
chr4 (99-363)||(8694595-8694852)
chr4 (98-363)||(31728322-31728579)
chr4 (98-363)||(31274396-31274654)
chr4 (99-363)||(37263520-37263777)
chr4 (99-367)||(16421923-16422184)
chr4 (99-274)||(5270380-5270557)
chr4 (99-367)||(13064770-13065028)
chr4 (99-367)||(33467960-33468216)
chr4 (99-363)||(29349164-29349422)
chr4 (111-367)||(55252521-55252772)
chr4 (98-363)||(37258821-37259077)
chr4 (102-367)||(51698803-51699065)
chr4 (98-274)||(5925760-5925929)
chr4 (99-344)||(2820693-2820930)
chr4 (99-335)||(12822867-12823097)
chr4 (99-256)||(19907269-19907427)
chr4 (99-367)||(13060343-13060606)
chr4 (114-367)||(32081139-32081384)
chr4 (132-274)||(19107540-19107685)
chr4 (98-274)||(23094071-23094247)
chr4 (132-274)||(19102928-19103072)
chr4 (216-344)||(19907148-19907268)
chr4 (99-274)||(33462315-33462488)
chr4 (135-266)||(8029328-8029457)
chr4 (152-274)||(32220574-32220698)
chr4 (136-372)||(40408814-40409046)
chr4 (201-334)||(6943684-6943819)
chr4 (137-274)||(27183197-27183326)
chr4 (135-274)||(12875366-12875507)
chr4 (416-474)||(19102081-19102139)
chr4 (416-474)||(37259810-37259868)
chr4 (98-166)||(6943834-6943902)
chr4 (416-472)||(31729320-31729376)
chr4 (416-474)||(31273625-31273683)
chr4 (416-474)||(37264497-37264555)
chr4 (417-474)||(8649564-8649621)
chr4 (417-474)||(8661371-8661428)
chr4 (416-473)||(42758688-42758745)
chr4 (132-274)||(48275829-48275970)
chr4 (416-483)||(31269129-31269196)
chr4 (416-466)||(19106720-19106770)
chr4 (98-338)||(31766779-31766999)
chr4 (416-474)||(47244352-47244410)
chr4 (422-483)||(47574720-47574781)
chr4 (416-474)||(51698021-51698078)
chr4 (422-483)||(48276588-48276649)
chr4 (422-474)||(16421133-16421185)
chr4 (422-474)||(55251823-55251875)
chr4 (136-263)||(47245103-47245230)
chr4 (132-263)||(8028148-8028271)
chr4 (422-479)||(8693810-8693867)
chr4 (423-472)||(13521929-13521978)
chr4 (422-479)||(32082030-32082087)
chr4 (417-474)||(33463290-33463347)
chr4 (299-367)||(39216249-39216317)
chr4 (178-274)||(12878864-12878961)
chr4 (416-479)||(13059509-13059571)
chr4 (422-483)||(12878334-12878394)
chr4 (422-483)||(19541100-19541161)
chr4 (422-474)||(8030415-8030467)
chr4 (422-466)||(12823840-12823884)
chr4 (422-474)||(40840432-40840483)
[»] scaffold0054 (4 HSPs)
scaffold0054 (102-367)||(30054-30313)
scaffold0054 (132-272)||(26405-26547)
scaffold0054 (417-471)||(29262-29316)
scaffold0054 (424-474)||(25503-25553)
[»] scaffold0352 (2 HSPs)
scaffold0352 (99-274)||(8071-8248)
scaffold0352 (416-479)||(7203-7266)
[»] chr6 (51 HSPs)
chr6 (99-274)||(17963515-17963692)
chr6 (98-367)||(11533658-11533920)
chr6 (98-367)||(11559168-11559430)
chr6 (120-367)||(12405338-12405579)
chr6 (99-363)||(16835118-16835377)
chr6 (101-346)||(20747256-20747495)
chr6 (99-367)||(11569650-11569910)
chr6 (101-372)||(19994344-19994608)
chr6 (94-367)||(2699066-2699334)
chr6 (120-363)||(6406838-6407074)
chr6 (120-274)||(17600342-17600495)
chr6 (156-367)||(25313487-25313694)
chr6 (156-367)||(26200981-26201188)
chr6 (104-274)||(22694347-22694517)
chr6 (104-274)||(33686606-33686777)
chr6 (99-367)||(11612861-11613122)
chr6 (132-263)||(12689942-12690074)
chr6 (199-367)||(5856862-5857022)
chr6 (101-261)||(11428933-11429094)
chr6 (132-268)||(12797772-12797914)
chr6 (181-274)||(22610473-22610568)
chr6 (200-367)||(17914469-17914628)
chr6 (299-367)||(4156486-4156554)
chr6 (416-472)||(17964492-17964548)
chr6 (136-274)||(19674735-19674874)
chr6 (417-479)||(12689070-12689132)
chr6 (299-344)||(11428866-11428911)
chr6 (417-474)||(24589098-24589155)
chr6 (101-165)||(5857033-5857096)
chr6 (418-474)||(16836091-16836147)
chr6 (422-474)||(20748223-20748275)
chr6 (416-483)||(25316497-25316563)
chr6 (416-483)||(26203991-26204057)
chr6 (416-474)||(11534644-11534702)
chr6 (416-474)||(11560154-11560212)
chr6 (303-372)||(22694518-22694587)
chr6 (416-474)||(33687536-33687594)
chr6 (422-479)||(6407800-6407856)
chr6 (422-474)||(13736617-13736669)
chr6 (420-479)||(4157306-4157365)
chr6 (417-472)||(8747888-8747943)
chr6 (416-479)||(11570682-11570745)
chr6 (234-272)||(14509941-14509979)
chr6 (416-474)||(19995336-19995394)
chr6 (98-171)||(29891917-29891991)
chr6 (430-475)||(11614039-11614084)
chr6 (422-474)||(9751747-9751799)
chr6 (422-474)||(14509088-14509140)
chr6 (423-483)||(15991680-15991740)
chr6 (423-483)||(15999342-15999402)
chr6 (314-346)||(17600276-17600308)
[»] chr8 (49 HSPs)
chr8 (98-363)||(40124850-40125108)
chr8 (102-367)||(15950528-15950794)
chr8 (120-367)||(38181260-38181501)
chr8 (113-367)||(2966462-2966710)
chr8 (99-274)||(1808413-1808589)
chr8 (98-367)||(44924877-44925140)
chr8 (99-274)||(1909904-1910081)
chr8 (99-274)||(28559074-28559250)
chr8 (107-367)||(26779981-26780234)
chr8 (102-274)||(28564258-28564429)
chr8 (114-274)||(18875357-18875519)
chr8 (178-274)||(33417492-33417590)
chr8 (99-258)||(7002623-7002783)
chr8 (145-249)||(17021243-17021348)
chr8 (145-249)||(17551680-17551785)
chr8 (416-474)||(18876300-18876358)
chr8 (416-474)||(19166738-19166796)
chr8 (417-472)||(31449800-31449855)
chr8 (416-474)||(33416651-33416708)
chr8 (98-146)||(33417603-33417651)
chr8 (416-483)||(1807568-1807635)
chr8 (99-274)||(23547568-23547738)
chr8 (416-474)||(38182170-38182228)
chr8 (416-474)||(44925857-44925914)
chr8 (417-474)||(4238275-4238332)
chr8 (417-474)||(4243014-4243071)
chr8 (422-474)||(17026039-17026091)
chr8 (422-474)||(17556531-17556583)
chr8 (422-474)||(34118570-34118622)
chr8 (417-469)||(43302625-43302677)
chr8 (423-474)||(1910909-1910960)
chr8 (416-479)||(15875601-15875664)
chr8 (416-471)||(17953805-17953860)
chr8 (416-479)||(36683678-36683741)
chr8 (299-345)||(19168664-19168710)
chr8 (417-474)||(10933535-10933592)
chr8 (299-344)||(22714149-22714194)
chr8 (299-367)||(17027018-17027086)
chr8 (299-367)||(17557510-17557578)
chr8 (416-483)||(2965725-2965792)
chr8 (420-483)||(23548569-23548632)
chr8 (98-159)||(17027165-17027226)
chr8 (98-159)||(17557657-17557718)
chr8 (302-367)||(1910102-1910167)
chr8 (178-262)||(17953183-17953267)
chr8 (185-274)||(24672364-24672453)
chr8 (417-478)||(28559588-28559649)
chr8 (200-274)||(33100550-33100623)
chr8 (422-474)||(40125824-40125876)
[»] scaffold0690 (1 HSPs)
scaffold0690 (99-367)||(6109-6372)
[»] scaffold0002 (4 HSPs)
scaffold0002 (99-270)||(5030-5203)
scaffold0002 (99-274)||(442897-443073)
scaffold0002 (416-474)||(443879-443936)
scaffold0002 (422-474)||(4178-4230)
[»] scaffold0057 (2 HSPs)
scaffold0057 (102-367)||(36000-36257)
scaffold0057 (430-483)||(35729-35782)
[»] scaffold0240 (1 HSPs)
scaffold0240 (99-338)||(4877-5108)
[»] scaffold0011 (1 HSPs)
scaffold0011 (132-259)||(64885-65013)
[»] scaffold0008 (1 HSPs)
scaffold0008 (416-483)||(255912-255979)
[»] scaffold1050 (1 HSPs)
scaffold1050 (417-483)||(1235-1301)
[»] scaffold0045 (1 HSPs)
scaffold0045 (417-472)||(83172-83227)
[»] scaffold0182 (1 HSPs)
scaffold0182 (422-474)||(9826-9878)
[»] scaffold0012 (1 HSPs)
scaffold0012 (422-472)||(166025-166075)
[»] scaffold2020 (1 HSPs)
scaffold2020 (416-465)||(490-539)
[»] scaffold0009 (1 HSPs)
scaffold0009 (416-465)||(164956-165005)
[»] scaffold0184 (1 HSPs)
scaffold0184 (420-479)||(2407-2466)


Alignment Details
Target: chr1 (Bit Score: 166; Significance: 1e-88; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 8138825 - 8138602
Alignment:
Q  1 ctgtatatgcaaaatccctatctttctcggcaacatataaaggaaaactaaaaaccattcaaaaaacgctacacacatcagaagccataaagcaaacctg 100  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  8138825 ctgtatatgcaaaatccctatctttctcagcaacatataaaggaaatctaaaaaccattcaaaaa-cgctacacacatcagaagccataaagcaaacctg 8138727  T
Q  101 ttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat-g 199  Q
    ||||||||||||||||||||||||||||||||||||||||||||    || ||||||||||||||||||||||| | ||||||||||||||||||||| |    
T  8138726 ttggaacattgatgtgatcttggaagaaaaattggaagattaaa---taagtaattatactttgatataatattgtgtgaattgaaaaaatagagtatcg 8138630  T
Q  200 ggtcccacataaaatggaacacacacat 227  Q
    |||| |||||||||| ||||||||||||    
T  8138629 ggtcacacataaaatagaacacacacat 8138602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 99 - 363
Target Start/End: Complemental strand, 10136464 - 10136207
Alignment:
Q  99 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 198  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||| ||| ||||||||||||||| |||| || | ||||||||||||||||||| |    
T  10136464 tgttggaacattgatgtgatgttggatgaaaaattggaagattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgt 10136365  T
Q  199 --gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattatt 296  Q
      |||||||||||||||| ||||||||||||||| | ||||||||||| |||||||||||||||||||||||||||||        ||||||||||||||    
T  10136364 gggggtcccacataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgataatga--taaaaataatagtaattatt 10136267  T
Q  297 actattatttttattcgtgaatatcacttcccataaatttagcctatggtagtcataataagaataa 363  Q
    |       ||||||||| ||||||||||| ||||||||||||| |||||| ||  | ||||||||||    
T  10136266 a-------ttttattcgagaatatcactttccataaatttagcttatggtggttgtgataagaataa 10136207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 99 - 363
Target Start/End: Complemental strand, 25844895 - 25844638
Alignment:
Q  99 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 198  Q
    |||||||||||||||||||| ||||| ||||||||| ||||||||||| ||| ||||||||||||||| |||| || | ||||||||||||||||||| |    
T  25844895 tgttggaacattgatgtgatgttggatgaaaaattgaaagattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgt 25844796  T
Q  199 --gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattatt 296  Q
      ||||||| |||||||| ||||||||||||||| | ||||||||||| ||||||||||||||||||||||||| |||        ||||||||||||||    
T  25844795 gggggtcccgcataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgatagtga--taaaaataatagtaattatt 25844698  T
Q  297 actattatttttattcgtgaatatcacttcccataaatttagcctatggtagtcataataagaataa 363  Q
    |       ||||||| | ||||||||||| ||||||||||||| |||||| ||  | ||||||||||    
T  25844697 a-------ttttattagagaatatcactttccataaatttagcttatggtggttgtgataagaataa 25844638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 299 - 417
Target Start/End: Complemental strand, 8138578 - 8138451
Alignment:
Q  299 tattatttttattcgtgaatatcacttcccataaatttagcctatggtagtcataataagaataagaataagaaggaattcaactgaatt---------t 389  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||| ||| ||||||||||||||||||||| |||||||||||||||         |    
T  8138578 tattatttttattcgtgaatatcacttcccataaatttagcttatggtggtcgtaataagaataagaataagaatgaattcaactgaatttcctatcttt 8138479  T
Q  390 ccttcgtccatatccaatgaatttgttt 417  Q
    ||||||||||||||||||||||||||||    
T  8138478 ccttcgtccatatccaatgaatttgttt 8138451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 101 - 274
Target Start/End: Original strand, 16648591 - 16648764
Alignment:
Q  101 ttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat-- 198  Q
    ||||||||||  |||||| |||||| | ||||| ||||||||||||     ||||||||||||||| |||| || | | ||||||||||||||||| |      
T  16648591 ttggaacattagtgtgattttggaaaataaattagaagattaaacacg---taattatactttgatctaatgttgtgtaaattgaaaaaatagagtgtag 16648687  T
Q  199 -gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 274  Q
     |||||||||||||||| ||||||||||||||| | ||||||||||| |||||||||||||||||||||||||||||    
T  16648688 ggggtcccacataaaatagaacacacacattagtagtgtttaaattgcggtatttaattttaaatacttgataatga 16648764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 99 - 274
Target Start/End: Original strand, 26926686 - 26926854
Alignment:
Q  99 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 198  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||| ||||||||||||||||||| |||| || | ||||||||        |||      
T  26926686 tgttggaacattgatgtgatgttggatgaaaaattggaagattaaacaccaactaattatactttgatttaatgttgtgtgaattga--------agt-g 26926776  T
Q  199 gggtcccacataaaatggaacacacacattagcaatg-tttaaattgaggtatttaa-ttttaaatacttgataatga 274  Q
    || ||||||||||||| ||||||||||||||| | || ||||||||| ||||||||| ||||||||||||||||||||    
T  26926777 ggatcccacataaaatagaacacacacattagtagtgttttaaattgtggtatttaatttttaaatacttgataatga 26926854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 129 - 274
Target Start/End: Complemental strand, 38622298 - 38622151
Alignment:
Q  129 aaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtatgg--gtcccacataaaatggaacacacaca 226  Q
    |||||||||||||||| ||||| ||||||||||||||| |||| || | ||||||||||||||||||| |||  |||||||||||||| |||| |||| |    
T  38622298 aaattggaagattaaaaatcaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtgggagtcccacataaaatagaactcacata 38622199  T
Q  227 ttagcaatgtttaaattgaggtatttaattttaaatacttgataatga 274  Q
    |||| | |||||||| ||  |||||| ||||| |||||||||||||||    
T  38622198 ttagtagtgtttaaaatgcagtatttgattttgaatacttgataatga 38622151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 143 - 363
Target Start/End: Original strand, 51040522 - 51040735
Alignment:
Q  143 aacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtatggg--tcccacataaaatggaacacacacattagcaatgtttaa 240  Q
    |||| ||| ||||||||||||||| |||| || | ||||||||||||||| ||| ||||  |||||||| |||| ||||||||||||||| | |||||||    
T  51040522 aacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaataaagtgtgggagtcccacatgaaatagaacacacacattagtagtgtttaa 51040621  T
Q  241 attgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattattactattatttttattcgtgaatatcacttcccataaatttagcc 340  Q
    |||| | |||||||||||||||||||||||||||        |||||||||||||||       ||||||||| |||||||| || |||||||||||||     
T  51040622 attgtgttatttaattttaaatacttgataatga--taaaaataatagtaattatta-------ttttattcgagaatatcattttccataaatttagct 51040712  T
Q  341 tatggtagtcataataagaataa 363  Q
    |||||| ||  | ||||||||||    
T  51040713 tatggtggttgtgataagaataa 51040735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 132 - 274
Target Start/End: Complemental strand, 16036712 - 16036568
Alignment:
Q  132 ttggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtatgg--gtcccacataaaatggaacacacacatta 229  Q
    ||||||||||||||| ||| ||| || |||||||| || | || | ||||||||||||||||||| |||  |||||||||||||| ||||||||||||||    
T  16036712 ttggaagattaaacaccaagtaactaaactttgatctagtgttgtgtgaattgaaaaaatagagtgtggaggtcccacataaaatagaacacacacatta 16036613  T
Q  230 gcaatgtttaaattgaggtatttaattttaaatacttgataatga 274  Q
    | | ||||||||| | ||||||||| ||||||||| |||||||||    
T  16036612 gtagtgtttaaatagtggtatttaaatttaaatacctgataatga 16036568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 132 - 274
Target Start/End: Original strand, 23191829 - 23191971
Alignment:
Q  132 ttggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtatgggtcccacataaaatggaacacacacattagc 231  Q
    ||||||||||||||| ||| | |||| |||||||| || | || | ||||||||||||||||||| ||||   |||||||||| |||||||||||||||     
T  23191829 ttggaagattaaacaccaagttattaaactttgatctagtgttgtgtgaattgaaaaaatagagtgtgggggtcacataaaatagaacacacacattagt 23191928  T
Q  232 aatgtttaaattgaggtatttaattttaaatacttgataatga 274  Q
    | ||||||| | | ||||||||||||||||||| |||||||||    
T  23191929 agtgtttaagtagtggtatttaattttaaatacctgataatga 23191971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 178 - 372
Target Start/End: Complemental strand, 11807279 - 11807091
Alignment:
Q  178 tgaattgaaaaaatagagtatggg--tcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgag 275  Q
    |||||||||||||||||||  ||   | ||||||||||| ||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||||     
T  11807279 tgaattgaaaaaatagagtgcggagattccacataaaatagaacacacacattagcagtgtttaaattgtggtatttaaatttaaatacttgataatga- 11807181  T
Q  276 nnnnnnntaatagtaattattactattatttttattcgtgaatatcacttcccataaatttagcctatggtagtcataataagaataagaataagaa 372  Q
           ||| |  |||  | | ||||||||||||||  |||||||| |||||||||||||||| |||||| ||  | |||||||||| ||||||||    
T  11807180 -------taaaaacaatattaattattatttttattccggaatatcatttcccataaatttagcttatggtggttgtgataagaataaaaataagaa 11807091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 132 - 367
Target Start/End: Original strand, 19797984 - 19798214
Alignment:
Q  132 ttggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaa-tagagtatggg---tcccacataaaatggaacacacacat 227  Q
    |||||| |||||| | ||| |||||||| |||||| |||| || | ||||||||||||| || ||| ||||   ||||||||||||| |||| | || ||    
T  19797984 ttggaaaattaaataccaagtaattata-tttgatctaatgttgtgtgaattgaaaaaaataaagtgtggggggtcccacataaaatagaactcgcatat 19798082  T
Q  228 tagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattattactattatttttattcgtgaatatcacttcc 327  Q
    ||| | ||||||||||| |||||||||||||||||||||||||||||        ||||||||||       |||||||||||| | |||||||||||||    
T  19798083 tagtagtgtttaaattgcggtatttaattttaaatacttgataatga--taaaaataatagtaat------aattatttttatttgagaatatcacttcc 19798174  T
Q  328 cataaatttagcctatggtagtcataataagaataagaat 367  Q
    |||||||||||| |||||| ||  | ||||||||||||||    
T  19798175 cataaatttagcttatggtggttgtgataagaataagaat 19798214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 132 - 274
Target Start/End: Complemental strand, 40167046 - 40166902
Alignment:
Q  132 ttggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaataga--gtatgggtcccacataaaatggaacacacacatta 229  Q
    ||||||||||||||| ||| | |||| |||||||| || |||| | |||||||||||||||||  ||| |||||||| ||||||| ||| |||||||| |    
T  40167046 ttggaagattaaacaccaagttattaaactttgatctagtattgtgtgaattgaaaaaatagaatgtaggggtcccaaataaaatagaagacacacatca 40166947  T
Q  230 gcaatgtttaaattgaggtatttaattttaaatacttgataatga 274  Q
    | | ||||||||  | ||||||||||||||||||| |||||||||    
T  40166946 gtagtgtttaaacagtggtatttaattttaaatacctgataatga 40166902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 185 - 274
Target Start/End: Complemental strand, 12261028 - 12260938
Alignment:
Q  185 aaaaaatagagtatggg-tcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 274  Q
    |||||||||||| |||| ||||||||||||| |||||||| |||||| | ||||||||| | |||||||||||||||||||||||||||||    
T  12261028 aaaaaatagagtgtggggtcccacataaaatagaacacactcattagtagtgtttaaatagtggtatttaattttaaatacttgataatga 12260938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 416 - 483
Target Start/End: Original strand, 16649546 - 16649613
Alignment:
Q  416 tttgagggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgtaactgaactt 483  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||| ||| ||||    
T  16649546 tttgagggtgtaattctcgaacagttttctacagtgcagtagttaaccacacagttgtagctggactt 16649613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 416 - 474
Target Start/End: Original strand, 33301113 - 33301171
Alignment:
Q  416 tttgagggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgta 474  Q
    ||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  33301113 tttgaaggtgtaattctcgaacagttttctacagtgcagtagttaaccgcacagttgta 33301171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 152 - 242
Target Start/End: Complemental strand, 46697399 - 46697309
Alignment:
Q  152 taattatactttgatataatattatctgaattgaaaaaatagagtatgggtcccacataaaatggaacacacacattagcaatgtttaaat 242  Q
    |||||| |||||||| || | || | |||||||||||||||||||||||||||||||||||||  |||||| ||||||| |||||||||||    
T  46697399 taattagactttgatttagtgttgtgtgaattgaaaaaatagagtatgggtcccacataaaatataacacatacattagtaatgtttaaat 46697309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 418 - 474
Target Start/End: Complemental strand, 25843916 - 25843860
Alignment:
Q  418 tgagggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgta 474  Q
    |||||||||||||||||||| |||||||| |||||||||||||||||||||||||||    
T  25843916 tgagggtgtaattctcgaacggttttctacagtgcagtagttaaccgcacagttgta 25843860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 416 - 479
Target Start/End: Complemental strand, 8138101 - 8138038
Alignment:
Q  416 tttgagggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgtaactga 479  Q
    |||||||||||||||||||||| |||||||| | ||||||||||||||||||||||||| ||||    
T  8138101 tttgagggtgtaattctcgaacggttttctacattgcagtagttaaccgcacagttgtagctga 8138038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 416 - 478
Target Start/End: Complemental strand, 10135618 - 10135556
Alignment:
Q  416 tttgagggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgtaactg 478  Q
    ||||||||||||||||| |||| |||||||| ||||||||||||||||||||||||| |||||    
T  10135618 tttgagggtgtaattcttgaacggttttctacagtgcagtagttaaccgcacagttgcaactg 10135556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 234 - 363
Target Start/End: Complemental strand, 10141095 - 10140975
Alignment:
Q  234 tgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattattactattatttttattcgtgaatatcacttcccataaa 333  Q
    ||||||||||| |||||||||||||||||||||||||||||        |||||||||||||||       ||||||||| |||||||||||||||||||    
T  10141095 tgtttaaattgtggtatttaattttaaatacttgataatga--taaaaataatagtaattatta-------ttttattcgagaatatcacttcccataaa 10141005  T
Q  334 tttagcctatggtagtcataataagaataa 363  Q
    |||||  |||||||||  | ||||||||||    
T  10141004 tttagtttatggtagttgtgataagaataa 10140975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 416 - 474
Target Start/End: Original strand, 19798946 - 19799004
Alignment:
Q  416 tttgagggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgta 474  Q
    ||||| ||||||| |||||||| |||||||| |||||||||||||||||||||||||||    
T  19798946 tttgaaggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgta 19799004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 299 - 367
Target Start/End: Complemental strand, 38621657 - 38621589
Alignment:
Q  299 tattatttttattcgtgaatatcacttcccataaatttagcctatggtagtcataataagaataagaat 367  Q
    ||||||||||||| | ||||||||||||||||||||||||| |||||| ||  | ||||||||||||||    
T  38621657 tattatttttatttgagaatatcacttcccataaatttagcttatggtggttgtgataagaataagaat 38621589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 420 - 474
Target Start/End: Complemental strand, 38620850 - 38620796
Alignment:
Q  420 agggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgta 474  Q
    ||||||||| |||| |||||||||||| | |||||||||||||||||||||||||    
T  38620850 agggtgtaaatctcaaacagttttctacaatgcagtagttaaccgcacagttgta 38620796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 136 - 274
Target Start/End: Original strand, 39586076 - 39586212
Alignment:
Q  136 aagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtatg--ggtcccacataaaatggaacacacacattagcaa 233  Q
    ||||||||| ||||| | |||| ||||||||||| |||| | | ||||||||||||||||| ||  ||||||||||||||| ||  ||| ||||||   |    
T  39586076 aagattaaagatcaagttattaaactttgatatagtattgtgt-aattgaaaaaatagagtgtggaggtcccacataaaataga--acaaacatta-ata 39586171  T
Q  234 tgtttaaattgaggtatttaattttaaatacttgataatga 274  Q
    ||||||||| | | ||||||||||||||||| |||||||||    
T  39586172 tgtttaaatagtgatatttaattttaaatacctgataatga 39586212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 417 - 474
Target Start/End: Complemental strand, 3094249 - 3094192
Alignment:
Q  417 ttgagggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgta 474  Q
    |||| |||||||||||||||| |||||||| |||||||||||||| || |||||||||    
T  3094249 ttgaaggtgtaattctcgaacggttttctacagtgcagtagttaatcgaacagttgta 3094192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 99 - 188
Target Start/End: Original strand, 5100132 - 5100220
Alignment:
Q  99 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaa 188  Q
    ||||| ||||||  |||||| |||||| | |||||||||||||||||| ||| |||||||||||| || |||| |||| |||||||||||    
T  5100132 tgttgtaacattagtgtgatgttggaaaataaattggaagattaaaca-caagtaattatactttaatctaatgttatgtgaattgaaaa 5100220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 417 - 466
Target Start/End: Original strand, 18784491 - 18784540
Alignment:
Q  417 ttgagggtgtaattctcgaacagttttctatagtgcagtagttaaccgca 466  Q
    |||| |||||||||||||||| |||||||| |||||||||||||||||||    
T  18784491 ttgaaggtgtaattctcgaacggttttctacagtgcagtagttaaccgca 18784540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 180 - 274
Target Start/End: Original strand, 39199805 - 39199905
Alignment:
Q  180 aattgaaaaaatagagtatgg--gtcccacataaaatggaacacacacattagca----atgtttaaattgaggtatttaattttaaatacttgataatg 273  Q
    ||||||||||||||||| |||  |||||||||||||| ||||||||||||||  |     |||||||||||  ||||||| |||||||||||| ||||||    
T  39199805 aattgaaaaaatagagtgtggaggtcccacataaaatagaacacacacattaatagtgtgtgtttaaattgcagtatttacttttaaatacttaataatg 39199904  T
Q  274 a 274  Q
    |    
T  39199905 a 39199905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 99 - 146
Target Start/End: Original strand, 39199733 - 39199780
Alignment:
Q  99 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaaca 146  Q
    ||||||||||||| |||||| | |||||||||||||||||||||||||    
T  39199733 tgttggaacattggtgtgatgtgggaagaaaaattggaagattaaaca 39199780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 422 - 474
Target Start/End: Original strand, 23192757 - 23192809
Alignment:
Q  422 ggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgta 474  Q
    |||||||||||||||| |||||||| |||||||||||||| || ||| |||||    
T  23192757 ggtgtaattctcgaacggttttctacagtgcagtagttaatcgaacaattgta 23192809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 299 - 339
Target Start/End: Original strand, 33300412 - 33300452
Alignment:
Q  299 tattatttttattcgtgaatatcacttcccataaatttagc 339  Q
    |||||||||||||||||||||||| ||| ||||||||||||    
T  33300412 tattatttttattcgtgaatatcaattctcataaatttagc 33300452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 38 - 97
Target Start/End: Original strand, 7670872 - 7670930
Alignment:
Q  38 taaaggaaaactaaaaaccattcaaaaaacgctacacacatcagaagccataaagcaaac 97  Q
    ||||| ||||||||||||||| || ||| | ||||||||||||||||||||| |||||||    
T  7670872 taaagtaaaactaaaaaccatccataaa-cactacacacatcagaagccatagagcaaac 7670930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 38 - 97
Target Start/End: Original strand, 7709094 - 7709152
Alignment:
Q  38 taaaggaaaactaaaaaccattcaaaaaacgctacacacatcagaagccataaagcaaac 97  Q
    ||||| ||||||||||||||| || ||| | ||||||||||||||||||||| |||||||    
T  7709094 taaagtaaaactaaaaaccatccataaa-cactacacacatcagaagccatagagcaaac 7709152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 38 - 97
Target Start/End: Complemental strand, 7709474 - 7709416
Alignment:
Q  38 taaaggaaaactaaaaaccattcaaaaaacgctacacacatcagaagccataaagcaaac 97  Q
    ||||| ||||||||||||||| || ||| | ||||||||||||||||||||| |||||||    
T  7709474 taaagtaaaactaaaaaccatccataaa-cactacacacatcagaagccatagagcaaac 7709416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 234 - 330
Target Start/End: Original strand, 47450287 - 47450375
Alignment:
Q  234 tgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattattactattatttttattcgtgaatatcacttcccat 330  Q
    |||||||| || | |||||||||||||||||||||||||||        ||| | |||| |||| ||||||||||||||| ||||||||||| ||||    
T  47450287 tgtttaaactgcgttatttaattttaaatacttgataatga--------taaaaataataattattattatttttattcgagaatatcactttccat 47450375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 439 - 472
Target Start/End: Complemental strand, 10140228 - 10140195
Alignment:
Q  439 gttttctatagtgcagtagttaaccgcacagttg 472  Q
    |||||||| |||||||||||||||||||||||||    
T  10140228 gttttctacagtgcagtagttaaccgcacagttg 10140195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 422 - 479
Target Start/End: Complemental strand, 16833640 - 16833583
Alignment:
Q  422 ggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgtaactga 479  Q
    ||||||||| |||||| |||||||| | |||||||||||| || ||||||||| ||||    
T  16833640 ggtgtaattttcgaacggttttctacaatgcagtagttaatcgaacagttgtagctga 16833583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 422 - 483
Target Start/End: Original strand, 28434513 - 28434574
Alignment:
Q  422 ggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgtaactgaactt 483  Q
    ||||||| |||||||| ||||||||||||  |||||||||| ||||| |||||  |||||||    
T  28434513 ggtgtaaatctcgaacggttttctatagtaaagtagttaactgcacaattgtagttgaactt 28434574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 422 - 474
Target Start/End: Original strand, 26927661 - 26927713
Alignment:
Q  422 ggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgta 474  Q
    ||||||||||||||||  ||||||| ||||||||||||||  | |||||||||    
T  26927661 ggtgtaattctcgaacgattttctacagtgcagtagttaagtgtacagttgta 26927713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 422 - 474
Target Start/End: Original strand, 39588306 - 39588358
Alignment:
Q  422 ggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgta 474  Q
    |||||||||||||||| |||||||| | |||||||||||| || ||| |||||    
T  39588306 ggtgtaattctcgaacggttttctacactgcagtagttaatcgaacaattgta 39588358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 422 - 474
Target Start/End: Original strand, 47451164 - 47451216
Alignment:
Q  422 ggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgta 474  Q
    |||||||||||||||| |||||||  ||| |||||||||| || |||||||||    
T  47451164 ggtgtaattctcgaacggttttctgcagtacagtagttaatcgaacagttgta 47451216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 122; Significance: 2e-62; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 99 - 363
Target Start/End: Original strand, 17974308 - 17974565
Alignment:
Q  99 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 198  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||||||| ||||||||||||||| |||| || | ||||||||||||||||||| |    
T  17974308 tgttggaacattgatgtgatgttggatgaaaaattggaagattaaacatcaaataattatactttgatctaatgttgtgtgaattgaaaaaatagagtgt 17974407  T
Q  199 gg-gtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatac-ttgataatgagnnnnnnntaatagtaattatt 296  Q
    || |||||||||||||| ||||||||||||||| | ||||||||||| ||||||||||||||||||| ||||||||||        ||| | ||||| |     
T  17974408 ggtgtcccacataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatactttgataatga--------taaaaataattgta 17974499  T
Q  297 actattatttttattcgtgaatatcacttcccataaatttagcctatggtagtcataataagaataa 363  Q
    | ||||| ||||||||| ||||||||||| ||||||||||||| |||||||||  | ||||||||||    
T  17974500 attatta-ttttattcgagaatatcactttccataaatttagcttatggtagttgtgataagaataa 17974565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 98 - 367
Target Start/End: Complemental strand, 12798070 - 12797806
Alignment:
Q  98 ctgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagta 197  Q
    ||||||||| |||  |||||| ||||||||||||||||||||||||||| ||| ||||||||||||||| |||| || | |||||||||||||||||||     
T  12798070 ctgttggaatattagtgtgatgttggaagaaaaattggaagattaaacaccaaataattatactttgatctaatgttgtgtgaattgaaaaaatagagtg 12797971  T
Q  198 tg---ggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaatta 294  Q
    ||   ||||||||||||||| ||||||||||||||| | ||||||||||| |||||||||||||||||||||||||||||        ||||||||||      
T  12797970 tgggaggtcccacataaaatagaacacacacattagtagtgtttaaattgcggtatttaattttaaatacttgataatga--taaaaataatagtaat-- 12797875  T
Q  295 ttactattatttttattcgtgaatatcacttcccataaatttagcctatggtagtcataataagaataagaat 367  Q
        ||||||||||||||| ||||||||||||| ||||||||| | |||||| ||  | ||||||||||||||    
T  12797874 ----tattatttttattcgagaatatcacttcctataaatttaccttatggtggttgtgataagaataagaat 12797806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 99 - 363
Target Start/End: Complemental strand, 30652053 - 30651796
Alignment:
Q  99 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 198  Q
    |||||||||||||||||||| ||||| ||||||||| ||||||||||| ||| ||||||||||||||| |||| || | ||||||||||||||||||| |    
T  30652053 tgttggaacattgatgtgatgttggatgaaaaattgaaagattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgt 30651954  T
Q  199 --gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattatt 296  Q
      ||||||| |||||||| ||||||||||||||| | ||||||||||| ||||||||||||||||||||||||| |||        ||||||||||||||    
T  30651953 gggggtcccgcataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgatagtga--taaaaataatagtaattatt 30651856  T
Q  297 actattatttttattcgtgaatatcacttcccataaatttagcctatggtagtcataataagaataa 363  Q
    |       ||||||||| ||||||||||| ||||||||||||| |||||| ||  | ||||||||||    
T  30651855 a-------ttttattcgagaatatcactttccataaatttagcttatggtggttgtgataagaataa 30651796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 98 - 274
Target Start/End: Complemental strand, 18345556 - 18345378
Alignment:
Q  98 ctgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagta 197  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||||| ||| ||||||||||||||| |||| || | |||||| ||||||||||||     
T  18345556 ctgttggaacattgatgtgatgttggatgaaaaattggaagattaaacaccaagtaattatactttgatctaatgttgtgtgaattaaaaaaatagagtg 18345457  T
Q  198 t--gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 274  Q
    |  |||||||||||||||| ||||||||||||||| | ||||||||||| ||||||||||||||||||||| |||||||    
T  18345456 tgggggtcccacataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttaataatga 18345378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 99 - 367
Target Start/End: Original strand, 25496341 - 25496603
Alignment:
Q  99 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 198  Q
    ||||| ||||||  |||||| |||||| | |||||||||||||||||| ||| ||||||||||||||| ||||||| | ||||||||||||||||||| |    
T  25496341 tgttgtaacatttgtgtgatgttggaaaataaattggaagattaaacaccaaataattatactttgatctaatattgtgtgaattgaaaaaatagagtgt 25496440  T
Q  199 gg--gtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattatt 296  Q
    ||  |||||||||||||| ||||||||||||||| | ||||||||||| |||||||||||||||||||||||||||||        ||||||||||        
T  25496441 ggaggtcccacataaaatagaacacacacattagtagtgtttaaattgcggtatttaattttaaatacttgataatga--taaaaataatagtaat---- 25496534  T
Q  297 actattatttttattcgtgaatatcacttcccataaatttagcctatggtagtcataataagaataagaat 367  Q
      ||||||||||||||| ||||||||||| | ||||||||| | |||||| ||  | ||||||||||||||    
T  25496535 --tattatttttattcgagaatatcactttctataaatttaacttatggtggttgtgataagaataagaat 25496603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 99 - 274
Target Start/End: Original strand, 17967921 - 17968098
Alignment:
Q  99 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 198  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||||||| ||||||||||||||| |||| || | |||||| |||||||||||| |    
T  17967921 tgttggaacattgatgtgatgttggatgaaaaattggaagattaaacatcaagtaattatactttgatctaatgttgtgtgaattaaaaaaatagagtgt 17968020  T
Q  199 -gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatac-ttgataatga 274  Q
     |||||||||||||||| ||||||||| ||||| | ||||||||||| ||||||||||||||||||| ||||||||||    
T  17968021 ggggtcccacataaaatagaacacacatattagtagtgtttaaattgtggtatttaattttaaatactttgataatga 17968098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 99 - 363
Target Start/End: Original strand, 19891464 - 19891719
Alignment:
Q  99 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 198  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||| ||  ||||||||||||||| |||| || | ||||||||||||||||| | |    
T  19891464 tgttggaacattgatgtgatgttggatgaaaaattggaagattaaacaccatgtaattatactttgatctaatcttgtgtgaattgaaaaaatagaatgt 19891563  T
Q  199 gg--gtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattatt 296  Q
    ||  |||||||||||||| ||  ||||||||||  | ||||||||||| |||||||||||||||||||||||||||||        ||||||||||||||    
T  19891564 gggagtcccacataaaataga--acacacattattagtgtttaaattgtggtatttaattttaaatacttgataatga--taaaaataatagtaattatt 19891659  T
Q  297 actattatttttattcgtgaatatcacttcccataaatttagcctatggtagtcataataagaataa 363  Q
    |       ||||||||| ||||||||||| ||||||||||||| |||||| ||  | ||||||||||    
T  19891660 a-------ttttattcgagaatatcactttccataaatttagcttatggtggttctgataagaataa 19891719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 99 - 274
Target Start/End: Original strand, 9184374 - 9184552
Alignment:
Q  99 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattg--aaaaaatagagt 196  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||| ||| |||||| |||||||| |||| || | |||||||  ||||||||||||    
T  9184374 tgttggaacattgatgtgatgttggatgaaaaattggaagattaaacaccaaataattaaactttgatctaatgttgtgtgaattgaaaaaaaatagagt 9184473  T
Q  197 at--gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 274  Q
     |  |||||||||||||||| ||||||||||||||| | ||||||||||| ||||||||| |||||||||||||||||||    
T  9184474 gtgggggtcccacataaaatagaacacacacattagtagtgtttaaattgtggtatttaa-tttaaatacttgataatga 9184552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 98 - 363
Target Start/End: Original strand, 9179682 - 9179941
Alignment:
Q  98 ctgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattg--aaaaaatagag 195  Q
    ||||||||| |||||||||||  |||| ||||||||||||||||||||| ||| ||||||||||||||| |||| || | |||||||  |||||||||||    
T  9179682 ctgttggaatattgatgtgatggtggatgaaaaattggaagattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaaaatagag 9179781  T
Q  196 tat--gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaatt 293  Q
    | |  |||||||||||||||| ||||||||||||||| | ||||||||||| ||||||||| |||||||||||||||||||        |||||||||||    
T  9179782 tgtgggggtcccacataaaatagaacacacacattagtagtgtttaaattgtggtatttaa-tttaaatacttgataatga--taaaaataatagtaatt 9179878  T
Q  294 attactattatttttattcgtgaatatcacttcccataaatttagcctatggtagtcataataagaataa 363  Q
    ||||       ||||||||| ||||||||||| | ||||||||||| |||||| ||  | ||||||||||    
T  9179879 atta-------ttttattcgagaatatcactttcgataaatttagcttatggtggttgtgataagaataa 9179941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 98 - 367
Target Start/End: Complemental strand, 29678818 - 29678555
Alignment:
Q  98 ctgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagta 197  Q
    |||||| ||||||  |||||| ||||||||||||||||||||||||| |  ||  ||||||| |||||| |||| || | |||||||||||||||||||     
T  29678818 ctgttgcaacattagtgtgatgttggaagaaaaattggaagattaaatactaaggaattatattttgatctaatgttgtgtgaattgaaaaaatagagtg 29678719  T
Q  198 tggg--tcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattat 295  Q
    | ||  ||||||||||||| ||||||||||||||| | ||||||||||| |||||||||||||||||| ||||||||||        ||||||||||       
T  29678718 tagggatcccacataaaatagaacacacacattagtagtgtttaaattgcggtatttaattttaaatatttgataatga--taaaaataatagtaat--- 29678624  T
Q  296 tactattatttttattcgtgaatatcacttcccataaatttagcctatggtagtcataataagaataagaat 367  Q
       |||||||||||||||  |||||||||||||||||||||||| || ||| ||  | ||||||||||||||    
T  29678623 ---tattatttttattcgaaaatatcacttcccataaatttagcttacggtggttgtgataagaataagaat 29678555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 99 - 367
Target Start/End: Original strand, 25477246 - 25477508
Alignment:
Q  99 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 198  Q
    ||||||||||||  |||||| ||| || | |||||||||||||||||||||| ||||||||||||||| |||| || |  ||||| |||||||||||| |    
T  25477246 tgttggaacattagtgtgatgttgaaaaataaattggaagattaaacatcaaataattatactttgatttaatgttgtgcgaattaaaaaaatagagtgt 25477345  T
Q  199 gg--gtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattatt 296  Q
    ||  |||  ||||||||| ||||||||||||||| | ||||||||||| |||||||||||||||||||||||||||||        ||||||||||        
T  25477346 ggtggtcttacataaaatagaacacacacattagtagtgtttaaattgcggtatttaattttaaatacttgataatga--taaaaataatagtaat---- 25477439  T
Q  297 actattatttttattcgtgaatatcacttcccataaatttagcctatggtagtcataataagaataagaat 367  Q
      ||||||||||||||| ||||||||||| | ||||||||||| |||||| ||    ||||||||||||||    
T  25477440 --tattatttttattcgagaatatcactttctataaatttagcttatggtggttgcgataagaataagaat 25477508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 99 - 367
Target Start/End: Complemental strand, 12361384 - 12361129
Alignment:
Q  99 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 198  Q
    ||||||||||||  |||| | |||||| | |||||||||||||||||| ||| ||||||||||||||| |||| || | ||||||||||||||||| | |    
T  12361384 tgttggaacattagtgtggtgttggaaaataaattggaagattaaacaccaaataattatactttgatctaatgttgtgtgaattgaaaaaatagaatgt 12361285  T
Q  199 gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattattac 298  Q
    |||| ||||||||||| ||  | ||||||||| | ||||||||||| |||||||||||||||||| ||||||||||        ||| | ||| || ||     
T  12361284 gggttccacataaaataga--agacacattagtagtgtttaaattgtggtatttaattttaaataattgataatga--------taaaaataa-tagta- 12361197  T
Q  299 tattatttttattcgtgaatatcacttcccataaatttagcctatggtagtcataataagaataagaat 367  Q
     |||||||||||||| || |||||||| ||||||||||||| |||||| ||  | ||||||||||||||    
T  12361196 -attatttttattcgagagtatcactttccataaatttagcttatggtggttgtgataagaataagaat 12361129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 101 - 274
Target Start/End: Complemental strand, 19897085 - 19896912
Alignment:
Q  101 ttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaataga--gtat 198  Q
    ||||||||||| | |||| |||||||| ||| |||||||||||| ||||| |||||||| ||||||||||| || | |||||||||||||||||  ||      
T  19897085 ttggaacattggtatgatgttggaagagaaaatggaagattaaatatcaagtaattatattttgatataatgttgtgtgaattgaaaaaatagagcgtgg 19896986  T
Q  199 gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 274  Q
    |||||||||||||||| ||  ||||||||||| | ||||||||||| |||||||||||||||||| ||||||||||    
T  19896985 gggtcccacataaaataga--acacacattagtagtgtttaaattgcggtatttaattttaaatatttgataatga 19896912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 101 - 259
Target Start/End: Original strand, 20101609 - 20101769
Alignment:
Q  101 ttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat-- 198  Q
    |||||| |||| |||||| ||||||||||||||||||||||||||| ||| ||||||||||||||| |||| || | ||||||||||||||||||| |      
T  20101609 ttggaaaattggtgtgatgttggaagaaaaattggaagattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtcg 20101708  T
Q  199 gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaatttta 259  Q
    |||| ||||||||||| ||||| ||||||||| | | ||||||||   |||||||||||||    
T  20101709 gggttccacataaaatagaacatacacattagtagtatttaaattactgtatttaatttta 20101769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 99 - 337
Target Start/End: Original strand, 24536973 - 24537212
Alignment:
Q  99 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatatta-------tctgaattgaaaaaat 191  Q
    ||||||||||||| ||| || ||||||||||||||||||||||||||| ||| |||| || ||||||| |||| ||        | ||||||||||||||    
T  24536973 tgttggaacattggtgttatgttggaagaaaaattggaagattaaacaccaattaatcattctttgatctaatgtttaatgttgtgtgaattgaaaaaat 24537072  T
Q  192 agagtatggg--tcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagt 289  Q
    ||||| ||||  |||||||||||||  |||||| ||||||| | |||||||| |  |||||||||||||||||||||||||||||        |||||||    
T  24537073 agagtgtgggggtcccacataaaatataacacatacattagtagtgtttaaactacggtatttaattttaaatacttgataatga--taaaaataatagt 24537170  T
Q  290 aattattactattatttttattcgtgaatatcacttcccataaattta 337  Q
    |||      |||||||||||||||||||||||| |||||||| |||||    
T  24537171 aat------tattatttttattcgtgaatatcatttcccatacattta 24537212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 98 - 223
Target Start/End: Original strand, 1933965 - 1934092
Alignment:
Q  98 ctgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagta 197  Q
    ||||||||||||||||||||| ||||| ||||||||| ||||||||||| ||| ||||||||||||||| |||| || | |||||||||||||||||||     
T  1933965 ctgttggaacattgatgtgatgttggatgaaaaattgaaagattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtg 1934064  T
Q  198 tg--ggtcccacataaaatggaacacac 223  Q
     |  ||||||||||||||| ||||||||    
T  1934065 gggaggtcccacataaaatagaacacac 1934092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 182 - 272
Target Start/End: Original strand, 40846622 - 40846714
Alignment:
Q  182 ttgaaaaaatagagtatggg--tcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataat 272  Q
    ||||||||||||||| ||||  ||||||||||||| ||||||||||||||| | ||||||||||| |||||||||||||||||||||||||||    
T  40846622 ttgaaaaaatagagtgtggggatcccacataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgataat 40846714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 132 - 274
Target Start/End: Complemental strand, 28604191 - 28604048
Alignment:
Q  132 ttggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtatg-ggtcccacataaaatggaacacacacattag 230  Q
    ||||||||||||||| ||| |||||| | |||||| || | || | |||||||||||||||||||||| ||||||||||||||| ||  ||||| ||||     
T  28604191 ttggaagattaaacaccaagtaattaaattttgatctagtgttgtgtgaattgaaaaaatagagtatgcggtcccacataaaatagattacacagattat 28604092  T
Q  231 caatgtttaaattgaggtatttaattttaaatacttgataatga 274  Q
    || ||||||||| | | ||||||||||||||||| |||||||||    
T  28604091 cagtgtttaaatagtgatatttaattttaaatacatgataatga 28604048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 178 - 273
Target Start/End: Original strand, 15446319 - 15446416
Alignment:
Q  178 tgaattgaaaaaatagagtat-gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaa-ttttaaatacttgataatg 273  Q
    ||||||||||||||||||| | |||||||||||||||| ||||||| ||||||| | ||||||||||| ||||||||| |||||||||||||||||||    
T  15446319 tgaattgaaaaaatagagtgttgggtcccacataaaatagaacacatacattagtagtgtttaaattgtggtatttaatttttaaatacttgataatg 15446416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 132 - 274
Target Start/End: Complemental strand, 31329168 - 31329024
Alignment:
Q  132 ttggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtatgg--gtcccacataaaatggaacacacacatta 229  Q
    ||||||||||||||| ||| | |||| |||||||| || | || | ||||||||||||||||||| |||  ||||||| |||||| ||||| |||| |||    
T  31329168 ttggaagattaaacaccaagttattaaactttgatctagtgttgtgtgaattgaaaaaatagagtgtggaggtcccacgtaaaatagaacaaacacgtta 31329069  T
Q  230 gcaatgtttaaattgaggtatttaattttaaatacttgataatga 274  Q
    | | ||||||||| | ||||||||||||||||||| |||||||||    
T  31329068 gtagtgtttaaatagtggtatttaattttaaatacatgataatga 31329024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 132 - 274
Target Start/End: Complemental strand, 31335889 - 31335745
Alignment:
Q  132 ttggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtatgg--gtcccacataaaatggaacacacacatta 229  Q
    ||||||||||||||| ||| | |||| |||||||| || | || | ||||||||||||||||||| |||  ||||||| |||||| ||||| |||| |||    
T  31335889 ttggaagattaaacaccaagttattaaactttgatctagtgttgtgtgaattgaaaaaatagagtgtggaggtcccacgtaaaatagaacaaacacgtta 31335790  T
Q  230 gcaatgtttaaattgaggtatttaattttaaatacttgataatga 274  Q
    | | ||||||||| | ||||||||||||||||||| |||||||||    
T  31335789 gtagtgtttaaatagtggtatttaattttaaatacatgataatga 31335745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 416 - 486
Target Start/End: Complemental strand, 29677543 - 29677473
Alignment:
Q  416 tttgagggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgtaactgaacttatt 486  Q
    |||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| ||| |||||||    
T  29677543 tttgagggtgtaattctcgaacggttttctacagtgcagtagttaaccgcacagttgtagctggacttatt 29677473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 132 - 274
Target Start/End: Original strand, 42925666 - 42925808
Alignment:
Q  132 ttggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtatg--ggtcccacataaaatggaacacacacatta 229  Q
    ||||||||||||||| ||| |||||| |||||||| || | || | ||||||||||||||||||| ||  |||||||| |||||| ||  ||||||||||    
T  42925666 ttggaagattaaacaccaagtaattaaactttgatctagtgttgtgtgaattgaaaaaatagagtgtggaggtcccacgtaaaataga--acacacatta 42925763  T
Q  230 gcaatgtttaaattgaggtatttaattttaaatacttgataatga 274  Q
    | | ||||||||| | | ||||||||||||||||| |||||||||    
T  42925764 gtagtgtttaaatagtgatatttaattttaaatacctgataatga 42925808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 416 - 474
Target Start/End: Complemental strand, 12797087 - 12797029
Alignment:
Q  416 tttgagggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgta 474  Q
    |||||||||||||||||||||| ||||||||  ||||||||||||||||||||||||||    
T  12797087 tttgagggtgtaattctcgaacggttttctacggtgcagtagttaaccgcacagttgta 12797029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 416 - 474
Target Start/End: Complemental strand, 29677929 - 29677871
Alignment:
Q  416 tttgagggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgta 474  Q
    |||| ||||||||||||||||| |||||||| |||||||||||||||||||||||||||    
T  29677929 tttgtgggtgtaattctcgaacggttttctacagtgcagtagttaaccgcacagttgta 29677871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 200 - 274
Target Start/End: Original strand, 44630508 - 44630582
Alignment:
Q  200 ggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 274  Q
    ||||||||||||||| ||||||||||||||| | ||||||||| | ||| ||||||||||||||| |||||||||    
T  44630508 ggtcccacataaaatagaacacacacattagtattgtttaaatagtggtgtttaattttaaatacctgataatga 44630582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 416 - 472
Target Start/End: Original strand, 1934926 - 1934982
Alignment:
Q  416 tttgagggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttg 472  Q
    |||||||||||||||||||||| |||||||| |||||| ||||||||||||||||||    
T  1934926 tttgagggtgtaattctcgaacggttttctacagtgcattagttaaccgcacagttg 1934982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 416 - 479
Target Start/End: Original strand, 19094427 - 19094490
Alignment:
Q  416 tttgagggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgtaactga 479  Q
    |||||||||||||||||||||| |||||||| ||||||||| |||| |||||||||||| ||||    
T  19094427 tttgagggtgtaattctcgaacggttttctacagtgcagtaattaatcgcacagttgtagctga 19094490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 417 - 472
Target Start/End: Complemental strand, 30658424 - 30658369
Alignment:
Q  417 ttgagggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttg 472  Q
    |||| |||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  30658424 ttgaaggtgtaattctcgaacggttttctacagtgcagtagttaaccgcacagttg 30658369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 99 - 158
Target Start/End: Original strand, 40846478 - 40846537
Alignment:
Q  99 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattat 158  Q
    ||||||||||||| |||||| ||||||||||||||||||||||||||| ||| |||||||    
T  40846478 tgttggaacattggtgtgatgttggaagaaaaattggaagattaaacaccaaataattat 40846537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 416 - 474
Target Start/End: Original strand, 25497259 - 25497316
Alignment:
Q  416 tttgagggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgta 474  Q
    |||||||||||||||||||||| |||||||| |||||| ||||||||||||||||||||    
T  25497259 tttgagggtgtaattctcgaacggttttctacagtgca-tagttaaccgcacagttgta 25497316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 416 - 474
Target Start/End: Complemental strand, 31326900 - 31326843
Alignment:
Q  416 tttgagggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgta 474  Q
    |||||||||||||||||||||| |||||||| |||||||||||||| ||||||||||||    
T  31326900 tttgagggtgtaattctcgaacggttttcta-agtgcagtagttaatcgcacagttgta 31326843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 178 - 274
Target Start/End: Original strand, 25637801 - 25637898
Alignment:
Q  178 tgaattgaaaaaatagag--tatgggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaa-ttttaaatacttgataatga 274  Q
    |||||||||||| |||||  | ||||||||||||||||| ||  ||||||||||| | |||||||| || ||||||||| ||||||||||||||||||||    
T  25637801 tgaattgaaaaattagagattgtgggtcccacataaaataga--acacacattagtagtgtttaaactgcggtatttaatttttaaatacttgataatga 25637898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 417 - 468
Target Start/End: Original strand, 17453513 - 17453564
Alignment:
Q  417 ttgagggtgtaattctcgaacagttttctatagtgcagtagttaaccgcaca 468  Q
    |||| |||||||||||||||| |||||||| |||||||||||||||||||||    
T  17453513 ttgaaggtgtaattctcgaacggttttctacagtgcagtagttaaccgcaca 17453564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 417 - 472
Target Start/End: Original strand, 10160659 - 10160713
Alignment:
Q  417 ttgagggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttg 472  Q
    |||| |||||||||||||||| |||||||| |||||| ||||||||||||||||||    
T  10160659 ttgaaggtgtaattctcgaacggttttctacagtgca-tagttaaccgcacagttg 10160713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 416 - 474
Target Start/End: Original strand, 9180657 - 9180715
Alignment:
Q  416 tttgagggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgta 474  Q
    ||||||||||||||||||||||  ||||||| |||||||||||||| |  |||||||||    
T  9180657 tttgagggtgtaattctcgaacgattttctacagtgcagtagttaatcaaacagttgta 9180715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 416 - 474
Target Start/End: Original strand, 9189736 - 9189794
Alignment:
Q  416 tttgagggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgta 474  Q
    ||||||||||||||||||||||  ||||||| |||||||||||||| |  |||||||||    
T  9189736 tttgagggtgtaattctcgaacgattttctacagtgcagtagttaatcaaacagttgta 9189794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 299 - 337
Target Start/End: Original strand, 12002056 - 12002094
Alignment:
Q  299 tattatttttattcgtgaatatcacttcccataaattta 337  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  12002056 tattatttttattcgtggatatcacttcccataaattta 12002094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 422 - 479
Target Start/End: Original strand, 19892405 - 19892462
Alignment:
Q  422 ggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgtaactga 479  Q
    ||||||||||||||||  ||||||| |||||||||||||| || ||||||||| ||||    
T  19892405 ggtgtaattctcgaacgattttctacagtgcagtagttaatcgaacagttgtagctga 19892462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 422 - 483
Target Start/End: Complemental strand, 28603459 - 28603398
Alignment:
Q  422 ggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgtaactgaactt 483  Q
    ||||||||||| |||| ||||| || |||||||||||||| || ||||||||| ||||||||    
T  28603459 ggtgtaattcttgaacggttttttacagtgcagtagttaatcgaacagttgtagctgaactt 28603398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 217 - 274
Target Start/End: Original strand, 34495183 - 34495240
Alignment:
Q  217 aacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 274  Q
    |||||||| ||||  | |||||||||||  ||||||||||||||||||||||||||||    
T  34495183 aacacacatattattagtgtttaaattgcagtatttaattttaaatacttgataatga 34495240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 422 - 474
Target Start/End: Complemental strand, 18344587 - 18344535
Alignment:
Q  422 ggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgta 474  Q
    ||||||||||||||||  ||||||| |||||||||||||| || |||||||||    
T  18344587 ggtgtaattctcgaacgattttctacagtgcagtagttaatcgaacagttgta 18344535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 299 - 346
Target Start/End: Original strand, 20103260 - 20103307
Alignment:
Q  299 tattatttttattcgtgaatatcacttcccataaatttagcctatggt 346  Q
    ||||||||||| | ||||||||||||| ||||||||||||| ||||||    
T  20103260 tattatttttagtggtgaatatcactttccataaatttagcttatggt 20103307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 416 - 483
Target Start/End: Original strand, 21523658 - 21523720
Alignment:
Q  416 tttgagggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgtaactgaactt 483  Q
    ||||||||||||| ||||||||  |||||||     ||||||||||||||||||||||| ||||||||    
T  21523658 tttgagggtgtaaatctcgaacgattttcta-----cagtagttaaccgcacagttgtagctgaactt 21523720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 423 - 474
Target Start/End: Complemental strand, 35602077 - 35602026
Alignment:
Q  423 gtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgta 474  Q
    ||||||||||||||| |||||||| |||||||||||||| || ||| |||||    
T  35602077 gtgtaattctcgaacggttttctacagtgcagtagttaatcgaacaattgta 35602026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 416 - 474
Target Start/End: Original strand, 25478231 - 25478288
Alignment:
Q  416 tttgagggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgta 474  Q
    ||||||||||||||||| |||| |||||||| |||||| ||||||  ||||||||||||    
T  25478231 tttgagggtgtaattcttgaacggttttctacagtgca-tagttattcgcacagttgta 25478288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 301 - 367
Target Start/End: Original strand, 40846735 - 40846801
Alignment:
Q  301 ttatttttattcgtgaatatcacttcccataaatttagcctatggtagtcataataagaataagaat 367  Q
    ||||||||||| ||||||||||||||| ||||||||||  |||| | ||  | ||||||||||||||    
T  40846735 ttatttttatttgtgaatatcacttcctataaatttagtttatgatggttgtgataagaataagaat 40846801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 427 - 468
Target Start/End: Complemental strand, 30631733 - 30631692
Alignment:
Q  427 aattctcgaacagttttctatagtgcagtagttaaccgcaca 468  Q
    ||||||||||| |||||||| |||||||||| ||||||||||    
T  30631733 aattctcgaacggttttctacagtgcagtagataaccgcaca 30631692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 420 - 481
Target Start/End: Complemental strand, 32079537 - 32079476
Alignment:
Q  420 agggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgtaactgaac 481  Q
    ||||||||||||||||||  ||  ||||| |||| ||||||| |||||||||||| ||||||    
T  32079537 agggtgtaattctcgaacgattagctataatgcaatagttaatcgcacagttgtagctgaac 32079476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 422 - 474
Target Start/End: Original strand, 7737790 - 7737842
Alignment:
Q  422 ggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgta 474  Q
    |||||||||||||||| |||||||| |||||| ||||||| || ||| |||||    
T  7737790 ggtgtaattctcgaacggttttctacagtgcaatagttaatcgaacaattgta 7737842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 422 - 474
Target Start/End: Complemental strand, 30651085 - 30651033
Alignment:
Q  422 ggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgta 474  Q
    ||||||||||||||||  |||||||  ||||||||||||| || |||||||||    
T  30651085 ggtgtaattctcgaacgattttctacggtgcagtagttaatcgaacagttgta 30651033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 121; Significance: 9e-62; HSPs: 60)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 99 - 363
Target Start/End: Complemental strand, 26668417 - 26668160
Alignment:
Q  99 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 198  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||| ||| ||||||||||||||| |||| || | ||||||||||||||||||| |    
T  26668417 tgttggaacattgatgtgatgttggatgaaaaattggaagattaaacaccaaataattatactttgatctaatgttgtgtgaattgaaaaaatagagtgt 26668318  T
Q  199 --gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattatt 296  Q
      |||||||||||||||| ||||||||||||||| | ||||||||||| |||||||||||||||||||||||||||||        ||||||||||||||    
T  26668317 gggggtcccacataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgataatga--taaaaataatagtaattatt 26668220  T
Q  297 actattatttttattcgtgaatatcacttcccataaatttagcctatggtagtcataataagaataa 363  Q
    |       ||||||||| ||||||||||| ||||||||||||| |||||| ||  | ||||||||||    
T  26668219 a-------ttttattcgagaatatcactttccataaatttagcttatggtggttgtgataagaataa 26668160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 99 - 363
Target Start/End: Complemental strand, 26940014 - 26939757
Alignment:
Q  99 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 198  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||| ||| ||||||||||||||| |||| || | ||||||||||||||||||| |    
T  26940014 tgttggaacattgatgtgatgttggatgaaaaattggaagattaaacaccaaataattatactttgatctaatgttgtgtgaattgaaaaaatagagtgt 26939915  T
Q  199 --gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattatt 296  Q
      |||||||||||||||| ||||||||||||||| | ||||||||||| |||||||||||||||||||||||||||||        ||||||||||||||    
T  26939914 gggggtcccacataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgataatga--taaaaataatagtaattatt 26939817  T
Q  297 actattatttttattcgtgaatatcacttcccataaatttagcctatggtagtcataataagaataa 363  Q
    |       ||||||||| ||||||||||| ||||||||||||| |||||| ||  | ||||||||||    
T  26939816 a-------ttttattcgagaatatcactttccataaatttagcttatggtggttgtgataagaataa 26939757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 99 - 363
Target Start/End: Original strand, 6154389 - 6154647
Alignment:
Q  99 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 198  Q
    |||||||||||||||||||| ||||| |||||||||||| |||||||||||| |||||||| |||||| |||| || | ||||||||||||||||||| |    
T  6154389 tgttggaacattgatgtgatgttggatgaaaaattggaaaattaaacatcaagtaattatattttgatctaatgttgtgtgaattgaaaaaatagagtgt 6154488  T
Q  199 --gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattatt 296  Q
      |||||||||||||||| ||||||||||||||| | ||||||||||| |||||||||||||||||||||||||||||        ||||||||||        
T  6154489 gggggtcccacataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgataatga--taaaaataatagtaat---- 6154582  T
Q  297 actattatttttattcgtgaatatcacttcccataaatttagcctatggtagtcataataagaataa 363  Q
      ||||||||||||||| |||||||||||  |||||||||||| |||||| ||  | ||||||||||    
T  6154583 --tattatttttattcgagaatatcactttacataaatttagcttatggtggttgtgataagaataa 6154647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 98 - 346
Target Start/End: Original strand, 29166929 - 29167170
Alignment:
Q  98 ctgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagta 197  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||||| ||| ||||||||||||||| |||| || | |||||||||||||||||||     
T  29166929 ctgttggaacattgatgtgatgttggatgaaaaattggaagattaaacaccaagtaattatactttgatttaatgttgtgtgaattgaaaaaatagagtg 29167028  T
Q  198 t--gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattat 295  Q
    |  |||||| ||||||||| ||||||||||||||| | ||||||||||| |||||||||||||||||||||||||||||         ||||||||||||    
T  29167029 tgagggtcctacataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgataatga--taaaaacaatagtaattat 29167126  T
Q  296 tactattatttttattcgtgaatatcacttcccataaatttagcctatggt 346  Q
    ||       ||||||||| ||||||||||| ||||||||||||| ||||||    
T  29167127 ta-------ttttattcgagaatatcactttccataaatttagcttatggt 29167170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 93 - 363
Target Start/End: Original strand, 37247750 - 37248014
Alignment:
Q  93 caaacctgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaata 192  Q
    |||| ||||||||||||||||||||| ||||| ||||||||| ||||||||||| ||| ||||||||||||||| |||| || | |||||||||||||||    
T  37247750 caaaactgttggaacattgatgtgatgttggatgaaaaattgaaagattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaata 37247849  T
Q  193 gagtat--gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagta 290  Q
    |||| |  ||||||| |||||||| ||||||||||||||| | ||||||||||| |||||||||||||||||||||||||||||        ||||||||    
T  37247850 gagtgtgggggtcccgcataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgataatga--taaaaataatagta 37247947  T
Q  291 attattactattatttttattcgtgaatatcacttcccataaatttagcctatggtagtcataataagaataa 363  Q
    ||      ||||||||||||| | ||||||||||| ||||||||||||  |||||| ||  | ||||||||||    
T  37247948 at------tattatttttatttgagaatatcactttccataaatttagtttatggtggttgtgataagaataa 37248014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 99 - 363
Target Start/End: Original strand, 37536894 - 37537152
Alignment:
Q  99 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 198  Q
    ||||||||||||||||||||  | || |||||||| |||||||||||||||| |||||||||||||||||||| || | ||||||||||||||||||| |    
T  37536894 tgttggaacattgatgtgatgcttgatgaaaaattagaagattaaacatcaagtaattatactttgatataatgttgtgtgaattgaaaaaatagagtgt 37536993  T
Q  199 -gggtcccacataaaatggaacacacac--attagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattat 295  Q
     |||||||||||||||| ||||||||||  ||||| | ||||||||||| |||||||||||||||||||||||||||||        |||||||||||||    
T  37536994 ggggtcccacataaaatagaacacacacatattagtagtgtttaaattgtggtatttaattttaaatacttgataatga--taaaaataatagtaattat 37537091  T
Q  296 tactattatttttattcgtgaatatcacttcccataaatttagcctatggtagtcataataagaataa 363  Q
    ||       ||||||||| ||||||||||| ||||||||||||| |||||| ||  | ||||||||||    
T  37537092 ta-------ttttattcgagaatatcactttccataaatttagcttatggtggttgtgataagaataa 37537152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 98 - 274
Target Start/End: Complemental strand, 7452895 - 7452717
Alignment:
Q  98 ctgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagta 197  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||  || |||||||||| |||| |||| || | |||||||||||||||||||     
T  7452895 ctgttggaacattgatgtgatgttggatgaaaaattggaagattaaacacaaagtaattatactctgatctaatgttgtgtgaattgaaaaaatagagtg 7452796  T
Q  198 tggg--tcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 274  Q
    ||||  ||||||||||||| ||||||||||||||| | ||||||||||| |||||||||||||||||||||||||||||    
T  7452795 tgggggtcccacataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgataatga 7452717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 99 - 363
Target Start/End: Original strand, 37646012 - 37646271
Alignment:
Q  99 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 198  Q
    ||||||||||||||||||||  | || ||||||||||||||||||||||||| ||||||||||||||| |||| || | ||||||||||||||||||| |    
T  37646012 tgttggaacattgatgtgatgcttgatgaaaaattggaagattaaacatcaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgt 37646111  T
Q  199 --gggtcccacataaaatggaacacacac--attagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaatta 294  Q
      |||||||||||||||| ||||||||||  ||||  | ||||||||||| |||||||||||||||||||||||||||||        ||||||||||||    
T  37646112 gggggtcccacataaaatagaacacacacatattattagtgtttaaattgtggtatttaattttaaatacttgataatga--taaaaataatagtaatta 37646209  T
Q  295 ttactattatttttattcgtgaatatcacttcccataaatttagcctatggtagtcataataagaataa 363  Q
    |||       ||||||||| ||||||||||| ||||||||||||| |||||| ||  | ||||||||||    
T  37646210 tta-------ttttattcgagaatatcactttccataaatttagcttatggtggttgtgataagaataa 37646271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 99 - 274
Target Start/End: Complemental strand, 36424777 - 36424600
Alignment:
Q  99 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 198  Q
    |||||||||||||||||||| |||||  |||||||||||||||||||| ||| |||||||||| |||| |||| || | ||||||||||||||||||| |    
T  36424777 tgttggaacattgatgtgatgttggataaaaaattggaagattaaacaccaagtaattatactatgatctaatgttgtgtgaattgaaaaaatagagtgt 36424678  T
Q  199 --gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 274  Q
      ||||| |||||||||| ||||||||||||||| | || |||||||| |||||||||||||||||||||| ||||||    
T  36424677 gggggtctcacataaaatagaacacacacattagtagtgcttaaattgtggtatttaattttaaatacttggtaatga 36424600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 99 - 367
Target Start/End: Original strand, 20180112 - 20180369
Alignment:
Q  99 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 198  Q
    ||||||||||||| ||||||  ||| |||||||||||||||||||||| ||| |||||||||||| || |||| || | |||||||| |||||||  | |    
T  20180112 tgttggaacattggtgtgatgctggtagaaaaattggaagattaaacaccaagtaattatactttaatctaatgttgtgtgaattgagaaaataggatgt 20180211  T
Q  199 gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattattac 298  Q
    ||| |||||||||||| ||||||||||||||| | ||||||||||  ||||||||||||||||   ||||||||||        ||||||||||          
T  20180212 gggacccacataaaatagaacacacacattagtagtgtttaaattacggtatttaattttaaa---ttgataatga--taaaaataatagtaat------ 20180300  T
Q  299 tattatttttattcgtgaatatcacttcccataaatttagcctatggtagtcataataagaataagaat 367  Q
    ||||||||||||||| ||||||||||||| ||||||||||| |||||| ||  | ||||||||||||||    
T  20180301 tattatttttattcgagaatatcacttcctataaatttagcttatggtggttgtgataagaataagaat 20180369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 99 - 274
Target Start/End: Complemental strand, 36430655 - 36430480
Alignment:
Q  99 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 198  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||| |||   |||||||| ||| || |||| || | ||||||||||||||||||| |    
T  36430655 tgttggaacattgatgtgatgttggatgaaaaattggaagattaaatatcg--taattatattttaatctaatgttgtgtgaattgaaaaaatagagtgt 36430558  T
Q  199 ggg--tcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 274  Q
    |||  ||||||||||||| ||||||||||||||| | ||||||||||  |||||||||||||||||| ||| ||||||    
T  36430557 gggggtcccacataaaatagaacacacacattagtagtgtttaaattatggtatttaattttaaatatttggtaatga 36430480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 100 - 274
Target Start/End: Original strand, 10759320 - 10759495
Alignment:
Q  100 gttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat- 198  Q
    |||||||||||  |||||| |||||| | |||||||||||||||||| ||| |||||||| |||||| |||| || | |||||| |||||||||||| |     
T  10759320 gttggaacattagtgtgatgttggaaaataaattggaagattaaaca-caagtaattatattttgatttaatgttgtgtgaattaaaaaaatagagtgta 10759418  T
Q  199 -gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 274  Q
     |||||||||||||||| ||||| ||||||||| | |||||||||||  ||||||||||||||||||||||||||||    
T  10759419 ggggtcccacataaaatagaacagacacattagtagtgtttaaattgcagtatttaattttaaatacttgataatga 10759495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 99 - 363
Target Start/End: Complemental strand, 39519524 - 39519277
Alignment:
Q  99 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 198  Q
    |||||||||||||||||||| ||||| ||||||||| ||||||||||| ||| ||| ||||||||||| |||| || | ||||||||||||||||||| |    
T  39519524 tgttggaacattgatgtgatgttggatgaaaaattgaaagattaaacaccaagtaaatatactttgatctaatgttgtgtgaattgaaaaaatagagtgt 39519425  T
Q  199 --gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattatt 296  Q
      ||||||| |||||||| |||||||||||          |||||||| ||||||||||||||||||||||||| |||        ||||||||||||||    
T  39519424 gggggtcccgcataaaatagaacacacaca----------ttaaattgtggtatttaattttaaatacttgatagtga--taaaaataatagtaattatt 39519337  T
Q  297 actattatttttattcgtgaatatcacttcccataaatttagcctatggtagtcataataagaataa 363  Q
    |       ||||||||| ||||||||||| ||||||||||||| |||||||||  | ||||||||||    
T  39519336 a-------ttttattcgagaatatcactttccataaatttagcttatggtagttgtgataagaataa 39519277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 100 - 346
Target Start/End: Complemental strand, 12104183 - 12103952
Alignment:
Q  100 gttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtatg 199  Q
    |||||||||||  |||||| |||||||||||||| |||||| ||||| ||| ||||||||||||||| |||| || | | ||| ||       ||||  |    
T  12104183 gttggaacattagtgtgatgttggaagaaaaattagaagatgaaacaccaagtaattatactttgatctaatgttgtgtaaataga-------gagtggg 12104091  T
Q  200 ggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattattact 299  Q
    ||||||||||||||||||||||||||||||| | ||||||||||| |||||||||||||||||||||||||||||        |||||||| |      |    
T  12104090 ggtcccacataaaatggaacacacacattagtagtgtttaaattgcggtatttaattttaaatacttgataatga--taaaaataatagtagt------t 12103999  T
Q  300 attatttttattcgtgaatatcacttcccataaatttagcctatggt 346  Q
    |||||||||||||| |||||||||||| |||||||||||| ||||||    
T  12103998 attatttttattcgagaatatcacttctcataaatttagcttatggt 12103952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 99 - 363
Target Start/End: Complemental strand, 39524163 - 39523916
Alignment:
Q  99 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 198  Q
    |||||||||||||||||||| ||||| ||||||||| ||||||||||| ||| ||| ||||||||||| |||| || | ||||||||||||||||||| |    
T  39524163 tgttggaacattgatgtgatgttggatgaaaaattgaaagattaaacaccaaataaatatactttgatctaatgttgtgtgaattgaaaaaatagagtgt 39524064  T
Q  199 --gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattatt 296  Q
      ||||||  |||||||| |||||||||||          |||||||| ||||||||||||||||||||||||| |||        ||||||||||||||    
T  39524063 gggggtccagcataaaatagaacacacaca----------ttaaattgtggtatttaattttaaatacttgatagtga--taaaaataatagtaattatt 39523976  T
Q  297 actattatttttattcgtgaatatcacttcccataaatttagcctatggtagtcataataagaataa 363  Q
    |       ||||||||| ||||||||||| ||||||||||||| |||||||||  | ||||||||||    
T  39523975 a-------ttttattcgagaatatcactttccataaatttagcttatggtagttgtgataagaataa 39523916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 132 - 274
Target Start/End: Original strand, 35678888 - 35679032
Alignment:
Q  132 ttggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat--gggtcccacataaaatggaacacacacatta 229  Q
    ||||||||||||||||||| |||||| |||||||| || | || | ||||||||||||||||||| |  | |||||||||||||| ||||||||||||||    
T  35678888 ttggaagattaaacatcaagtaattaaactttgatctagtgttgtgtgaattgaaaaaatagagtgtaagagtcccacataaaatagaacacacacatta 35678987  T
Q  230 gcaatgtttaaattgaggtatttaattttaaatacttgataatga 274  Q
    | | ||||||||| | ||||||| ||||||||||| |||||||||    
T  35678988 gtagtgtttaaatagtggtattttattttaaatacctgataatga 35679032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 182 - 274
Target Start/End: Complemental strand, 40148897 - 40148805
Alignment:
Q  182 ttgaaaaaatagagtatgggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 274  Q
    ||||||||||||||| ||||||||||||||||| ||||| ||||||||| | ||||||||||| |||||||||||||||||||||||||||||    
T  40148897 ttgaaaaaatagagtgtgggtcccacataaaatagaacaaacacattagtagtgtttaaattgcggtatttaattttaaatacttgataatga 40148805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 113 - 229
Target Start/End: Original strand, 23757135 - 23757253
Alignment:
Q  113 tgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat--gggtcccacata 210  Q
    |||||| ||||||||||||||||||||||||||| ||| ||||||||||| ||| |||| || | ||||||||||||||||||| |  |||||||||| |    
T  23757135 tgtgatgttggaagaaaaattggaagattaaacaccaagtaattatacttagatttaatgttgtgtgaattgaaaaaatagagtgtgggggtcccacaca 23757234  T
Q  211 aaatggaacacacacatta 229  Q
    |||| ||||||||||||||    
T  23757235 aaatagaacacacacatta 23757253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 113 - 229
Target Start/End: Original strand, 23822591 - 23822709
Alignment:
Q  113 tgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat--gggtcccacata 210  Q
    |||||| ||||||||||||||||||||||||||| ||| ||||||||||| ||| |||| || | ||||||||||||||||||| |  |||||||||| |    
T  23822591 tgtgatgttggaagaaaaattggaagattaaacaccaagtaattatacttagatttaatgttgtgtgaattgaaaaaatagagtgtgggggtcccacaca 23822690  T
Q  211 aaatggaacacacacatta 229  Q
    |||| ||||||||||||||    
T  23822691 aaatagaacacacacatta 23822709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 178 - 274
Target Start/End: Complemental strand, 17162917 - 17162818
Alignment:
Q  178 tgaattgaaaaaatagagtatggg--tcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaa-ttttaaatacttgataatga 274  Q
    ||||||||||||||||| | ||||  ||||||||||||| |||||||||||||||   ||||||||||||||||||||| |||||||||| |||||||||    
T  17162917 tgaattgaaaaaatagaatgtgggagtcccacataaaatagaacacacacattagtggtgtttaaattgaggtatttaatttttaaatacctgataatga 17162818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 178 - 274
Target Start/End: Complemental strand, 17159437 - 17159338
Alignment:
Q  178 tgaattgaaaaaatagagtatgggt--cccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaa-ttttaaatacttgataatga 274  Q
    ||||||||||||||||| | |||||  |||||||||||| ||| ||||||||||| | ||||| ||||||||||||||| |||||||||| |||||||||    
T  17159437 tgaattgaaaaaatagaatgtgggtgtcccacataaaatagaagacacacattagtagtgttttaattgaggtatttaatttttaaatacctgataatga 17159338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 132 - 273
Target Start/End: Complemental strand, 23689177 - 23689034
Alignment:
Q  132 ttggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtatggg--tcccacataaaatggaacacacacatta 229  Q
    ||||||||||||||| |||  ||||| |||||||| || |  | | || ||||||||||| |||| ||||  ||||||||||||| |||||||||||||     
T  23689177 ttggaagattaaacaccaaacaattagactttgatctagtgatttgtggattgaaaaaattgagtgtggggatcccacataaaatagaacacacacattc 23689078  T
Q  230 gcaatgtttaaattgaggtatttaattttaaatacttgataatg 273  Q
    | | |||| |||||| ||||||||||||||||||| | ||||||    
T  23689077 gtagtgttaaaattgtggtatttaattttaaataccttataatg 23689034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 132 - 264
Target Start/End: Complemental strand, 4872988 - 4872854
Alignment:
Q  132 ttggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtatggg--tcccacataaaatggaacacacacatta 229  Q
    ||||||||||||||| ||| | |||| |||||||| || | || | ||||||||||||||||||| ||||  | ||| ||||||| ||||||||||| ||    
T  4872988 ttggaagattaaacaccaaattattaaactttgatttagtgttgtgtgaattgaaaaaatagagtgtgggggttccatataaaatagaacacacacaata 4872889  T
Q  230 gcaatgtttaaattgaggtatttaattttaaatac 264  Q
    | | ||||||||| | | |||||||||||||||||    
T  4872888 gtagtgtttaaatagtgatatttaattttaaatac 4872854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 416 - 474
Target Start/End: Original strand, 20180996 - 20181054
Alignment:
Q  416 tttgagggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgta 474  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||||||||||| |||||    
T  20180996 tttgagggtgtaaatctcgaacagttttctacagtgcagtagttaaccgcacaattgta 20181054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 417 - 483
Target Start/End: Original strand, 32461483 - 32461549
Alignment:
Q  417 ttgagggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgtaactgaactt 483  Q
    |||| |||||||||||||||| |||||||| ||||||||||||||||||||||||| | ||||||||    
T  32461483 ttgaaggtgtaattctcgaacggttttctacagtgcagtagttaaccgcacagttgcagctgaactt 32461549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 153 - 263
Target Start/End: Original strand, 6511614 - 6511726
Alignment:
Q  153 aattatactttgatataatattatctgaattgaaaaaatagagtatggg--tcccacataaaatggaacacacacattagcaatgtttaaattgaggtat 250  Q
    ||||||| |||||| |||| || | ||||||||||||||  ||| ||||  ||||||||||||| |||| |||||||||| | |||||||||||  ||||    
T  6511614 aattatattttgatctaatgttgtgtgaattgaaaaaattaagtgtgggagtcccacataaaatagaactcacacattagtagtgtttaaattgcagtat 6511713  T
Q  251 ttaattttaaata 263  Q
    |||||||||||||    
T  6511714 ttaattttaaata 6511726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 205 - 274
Target Start/End: Original strand, 16115294 - 16115363
Alignment:
Q  205 cacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 274  Q
    ||||||||||| |||||||||||||| ||||||||||||  ||| |||||||||||||||||| ||||||    
T  16115294 cacataaaatgaaacacacacattagtaatgtttaaattacggtgtttaattttaaatacttgctaatga 16115363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 99 - 190
Target Start/End: Complemental strand, 40150334 - 40150243
Alignment:
Q  99 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaa 190  Q
    ||||||||||||  |||||| ||| || | |||||||||||||||||| ||| ||||||||||||||| |||| || | |||||||||||||    
T  40150334 tgttggaacattagtgtgatgttgaaaaataaattggaagattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaa 40150243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 417 - 474
Target Start/End: Complemental strand, 3666093 - 3666036
Alignment:
Q  417 ttgagggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgta 474  Q
    |||| |||||||||| ||||| |||||||| |||||||||||||||||||||||||||    
T  3666093 ttgaaggtgtaattcccgaacggttttctacagtgcagtagttaaccgcacagttgta 3666036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 422 - 483
Target Start/End: Original strand, 12041871 - 12041932
Alignment:
Q  422 ggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgtaactgaactt 483  Q
    |||||||||||||||||||||| ||||||||||||||||| || ||||||||| ||| ||||    
T  12041871 ggtgtaattctcgaacagttttttatagtgcagtagttaatcgaacagttgtagctggactt 12041932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 132 - 274
Target Start/End: Original strand, 9725763 - 9725901
Alignment:
Q  132 ttggaagattaaacatcaactaattatactttgatataatattatctgaattg-aaaaaatagagtatgg--gtcccacataaaatggaacacacacatt 228  Q
    ||||||||||||||| ||| | |||| ||||||||||| | || | ||||||| |||||||||||| |||  |||||||||||||| |||||||||        
T  9725763 ttggaagattaaacaccaagttattaaactttgatatagtgttgtgtgaattgaaaaaaatagagtgtggatgtcccacataaaatagaacacaca---- 9725858  T
Q  229 agcaatgtttaaattgaggtatttaattttaaatacttgataatga 274  Q
       | ||||||||| | |||||||||||||||||||  ||||||||    
T  9725859 ---agtgtttaaatagtggtatttaattttaaataccggataatga 9725901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 416 - 472
Target Start/End: Original strand, 37248729 - 37248784
Alignment:
Q  416 tttgagggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttg 472  Q
    |||||||||||||||||||||| |||||||||||| ||||| |||||||||||||||    
T  37248729 tttgagggtgtaattctcgaacggttttctatagtacagta-ttaaccgcacagttg 37248784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 416 - 479
Target Start/End: Original strand, 41587095 - 41587156
Alignment:
Q  416 tttgagggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgtaactga 479  Q
    ||||||||||||||||  |||| |||||||| ||||||||||||||||||||||||||| ||||    
T  41587095 tttgagggtgtaattc--gaacggttttctacagtgcagtagttaaccgcacagttgtagctga 41587156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 422 - 472
Target Start/End: Complemental strand, 7451914 - 7451864
Alignment:
Q  422 ggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttg 472  Q
    |||||||||||||||| |||||||| |||| ||||||||||||||||||||    
T  7451914 ggtgtaattctcgaacggttttctacagtgtagtagttaaccgcacagttg 7451864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 422 - 472
Target Start/End: Complemental strand, 39523205 - 39523155
Alignment:
Q  422 ggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttg 472  Q
    ||||||||||| |||| |||||||| |||||||||||||||||||||||||    
T  39523205 ggtgtaattcttgaacggttttctacagtgcagtagttaaccgcacagttg 39523155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 422 - 479
Target Start/End: Complemental strand, 556851 - 556794
Alignment:
Q  422 ggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgtaactga 479  Q
    |||||||||||||||| |||||||| |||||||||||||| || ||||||||| ||||    
T  556851 ggtgtaattctcgaacggttttctacagtgcagtagttaatcgaacagttgtagctga 556794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 422 - 479
Target Start/End: Complemental strand, 561623 - 561566
Alignment:
Q  422 ggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgtaactga 479  Q
    |||||||||||||||| |||||||| |||||||||||||| || ||||||||| ||||    
T  561623 ggtgtaattctcgaacggttttctacagtgcagtagttaatcgaacagttgtagctga 561566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 417 - 474
Target Start/End: Original strand, 12045073 - 12045130
Alignment:
Q  417 ttgagggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgta 474  Q
    |||| |||||||||||||||| ||  |||| |||||||||||||||||||||||||||    
T  12045073 ttgaaggtgtaattctcgaacggtagtctacagtgcagtagttaaccgcacagttgta 12045130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 97 - 150
Target Start/End: Original strand, 25668154 - 25668207
Alignment:
Q  97 cctgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaa 150  Q
    ||||||||||||||| |||  | |||||||||||||||||||||||||||||||    
T  25668154 cctgttggaacattggtgttgtgttggaagaaaaattggaagattaaacatcaa 25668207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 417 - 474
Target Start/End: Original strand, 36937445 - 36937502
Alignment:
Q  417 ttgagggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgta 474  Q
    |||| |||||||||||||||| |||||||| |||||||||||||| || |||||||||    
T  36937445 ttgaaggtgtaattctcgaacggttttctacagtgcagtagttaatcgaacagttgta 36937502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 417 - 474
Target Start/End: Original strand, 36942199 - 36942256
Alignment:
Q  417 ttgagggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgta 474  Q
    |||| |||||||||||||||| |||||||| |||||||||||||| || |||||||||    
T  36942199 ttgaaggtgtaattctcgaacggttttctacagtgcagtagttaatcgaacagttgta 36942256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 422 - 474
Target Start/End: Original strand, 6155358 - 6155410
Alignment:
Q  422 ggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgta 474  Q
    |||||||||||||||| |||||||| |||||||||||||| || |||||||||    
T  6155358 ggtgtaattctcgaacggttttctacagtgcagtagttaatcgaacagttgta 6155410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 422 - 474
Target Start/End: Original strand, 12501838 - 12501890
Alignment:
Q  422 ggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgta 474  Q
    ||||||||||||||||  ||||||| ||||||||||||||||| |||||||||    
T  12501838 ggtgtaattctcgaacgattttctacagtgcagtagttaaccgaacagttgta 12501890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 423 - 483
Target Start/End: Original strand, 16116189 - 16116249
Alignment:
Q  423 gtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgtaactgaactt 483  Q
    ||||||||||||||| |||||||||||||||||||||||| | || ||||||  |||||||    
T  16116189 gtgtaattctcgaacggttttctatagtgcagtagttaacagtactgttgtagttgaactt 16116249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 434 - 477
Target Start/End: Original strand, 9726638 - 9726681
Alignment:
Q  434 gaacagttttctatagtgcagtagttaaccgcacagttgtaact 477  Q
    |||| |||||||| ||||||||||||||||||||||||||||||    
T  9726638 gaacggttttctacagtgcagtagttaaccgcacagttgtaact 9726681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 416 - 475
Target Start/End: Original strand, 10759754 - 10759812
Alignment:
Q  416 tttgagggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgtaa 475  Q
    ||||||||| |||||||||||| ||||||||  ||||| |||||||||||||||||||||    
T  10759754 tttgagggtataattctcgaacggttttctaccgtgca-tagttaaccgcacagttgtaa 10759812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 420 - 474
Target Start/End: Complemental strand, 12103183 - 12103129
Alignment:
Q  420 agggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgta 474  Q
    ||||||||||||||||||  ||||||| |||||||||||||| |||||| |||||    
T  12103183 agggtgtaattctcgaacgattttctacagtgcagtagttaatcgcacatttgta 12103129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 422 - 472
Target Start/End: Complemental strand, 39518566 - 39518516
Alignment:
Q  422 ggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttg 472  Q
    ||||||||||| |||| |||||||| | |||||||||||||||||||||||    
T  39518566 ggtgtaattcttgaacggttttctacactgcagtagttaaccgcacagttg 39518516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 422 - 474
Target Start/End: Original strand, 11981219 - 11981271
Alignment:
Q  422 ggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgta 474  Q
    |||||||||||||||| |||||||| |||||| ||||||| || |||||||||    
T  11981219 ggtgtaattctcgaacggttttctacagtgcaatagttaatcgaacagttgta 11981271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 422 - 474
Target Start/End: Original strand, 29167912 - 29167964
Alignment:
Q  422 ggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgta 474  Q
    ||||||||||||||||  ||||||| |||||||||||||| || |||||||||    
T  29167912 ggtgtaattctcgaacgattttctacagtgcagtagttaatcgaacagttgta 29167964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 422 - 468
Target Start/End: Original strand, 15414820 - 15414866
Alignment:
Q  422 ggtgtaattctcgaacagttttctatagtgcagtagttaaccgcaca 468  Q
    ||||||| | |||||  ||||||||||||||||||||||||||||||    
T  15414820 ggtgtaaatttcgaaaggttttctatagtgcagtagttaaccgcaca 15414866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 301 - 339
Target Start/End: Original strand, 16115381 - 16115419
Alignment:
Q  301 ttatttttattcgtgaatatcacttcccataaatttagc 339  Q
    |||||| |||||||| |||||||||||||||||||||||    
T  16115381 ttatttatattcgtggatatcacttcccataaatttagc 16115419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 422 - 472
Target Start/End: Complemental strand, 26667428 - 26667378
Alignment:
Q  422 ggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttg 472  Q
    ||||||||||||||||  ||||||| |||||||||||||| || |||||||    
T  26667428 ggtgtaattctcgaacgattttctagagtgcagtagttaatcgaacagttg 26667378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 422 - 472
Target Start/End: Complemental strand, 26939025 - 26938975
Alignment:
Q  422 ggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttg 472  Q
    ||||||||||||||||  ||||||| |||||||||||||| || |||||||    
T  26939025 ggtgtaattctcgaacgattttctagagtgcagtagttaatcgaacagttg 26938975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 416 - 474
Target Start/End: Original strand, 35679809 - 35679866
Alignment:
Q  416 tttgagggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgta 474  Q
    ||||||||||||||||||||||  ||||||| | |||| |||||||| |||||||||||    
T  35679809 tttgagggtgtaattctcgaacgattttctacaatgca-tagttaactgcacagttgta 35679866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 417 - 474
Target Start/End: Complemental strand, 41996821 - 41996769
Alignment:
Q  417 ttgagggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgta 474  Q
    |||| |||||||||||||||| ||||||||     |||||||||||||||||||||||    
T  41996821 ttgaaggtgtaattctcgaacggttttcta-----cagtagttaaccgcacagttgta 41996769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 417 - 474
Target Start/End: Complemental strand, 42001590 - 42001538
Alignment:
Q  417 ttgagggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgta 474  Q
    |||| |||||||||||||||| ||||||||     |||||||||||||||||||||||    
T  42001590 ttgaaggtgtaattctcgaacggttttcta-----cagtagttaaccgcacagttgta 42001538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 299 - 339
Target Start/End: Original strand, 6511780 - 6511820
Alignment:
Q  299 tattatttttattcgtgaatatcacttcccataaatttagc 339  Q
    ||||||||||||| | ||||||||||||| |||||||||||    
T  6511780 tattatttttatttgagaatatcacttcctataaatttagc 6511820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 422 - 474
Target Start/End: Complemental strand, 36428865 - 36428813
Alignment:
Q  422 ggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgta 474  Q
    |||||||||||||| |  ||||||| |||||||||||||| || |||||||||    
T  36428865 ggtgtaattctcgagcgattttctacagtgcagtagttaatcgaacagttgta 36428813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 199 - 263
Target Start/End: Original strand, 40567661 - 40567725
Alignment:
Q  199 gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaata 263  Q
    |||| ||| |||||||  ||||||||| |||| | || |||||||| ||||||||||||||||||    
T  40567661 gggtaccatataaaataaaacacacacgttagtagtgattaaattgtggtatttaattttaaata 40567725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 120; Significance: 3e-61; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 99 - 367
Target Start/End: Complemental strand, 20521100 - 20520838
Alignment:
Q  99 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 198  Q
    ||||||||||||  |||||| ||||||||||||||||||||||||||| ||| ||||||||||||||| |||| || | ||||||||||||||||||| |    
T  20521100 tgttggaacattagtgtgatgttggaagaaaaattggaagattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgt 20521001  T
Q  199 --gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattatt 296  Q
      |||||||||||||||| ||| ||||||||||| | ||||||||||| ||||||||| |||||||||||||||||||        ||||||||||        
T  20521000 gggggtcccacataaaatagaatacacacattagtagtgtttaaattgcggtatttaactttaaatacttgataatga--taaaaataatagtaat---- 20520907  T
Q  297 actattatttttattcgtgaatatcacttcccataaatttagcctatggtagtcataataagaataagaat 367  Q
      ||||||||||||||| ||||||||||||||||||||||||| |||||| ||  | ||||||||||||||    
T  20520906 --tattatttttattcgagaatatcacttcccataaatttagcttatggtggttgtgataagaataagaat 20520838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 98 - 344
Target Start/End: Complemental strand, 18473146 - 18472907
Alignment:
Q  98 ctgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagta 197  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||  || ||||||||||||||| |||| || | |||||||||||||||||||     
T  18473146 ctgttggaacattgatgtgatgttggatgaaaaattggaagattaaacacaaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtg 18473047  T
Q  198 t--gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattat 295  Q
    |  |||||||||||||||| ||||||||||||||| | ||||||||||| |||||||||||||||||||||||||||||        |||||||||||||    
T  18473046 tgggggtcccacataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgataatga--taaaaataatagtaattat 18472949  T
Q  296 tactattatttttattcgtgaatatcacttcccataaatttagcctatg 344  Q
    ||       ||||||||| ||||||||||| ||||||||||||| ||||    
T  18472948 ta-------ttttattcgagaatatcactttccataaatttagcttatg 18472907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 99 - 367
Target Start/End: Original strand, 14437650 - 14437909
Alignment:
Q  99 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 198  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||| ||| ||||||||||||||| |    || | ||||||||||||||||||| |    
T  14437650 tgttggaacattgatgtgatgttggatgaaaaattggaagattaaacaccaagtaattatactttgatctg---ttgtgtgaattgaaaaaatagagtgt 14437746  T
Q  199 gg--gtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattatt 296  Q
    ||  ||| |||||||||| ||||||||||||||| | ||||||||||| |||||||||||||||||||||||||||||        ||| | |||| ||     
T  14437747 ggaggtctcacataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgataatga--------taaaaataataata 14437838  T
Q  297 actattatttttattcgtgaatatcacttcccataaatttagcctatggtagtcataataagaataagaat 367  Q
    | ||||||||||||||| ||||||||||| ||||||||||||| || ||| ||  | ||||||||||||||    
T  14437839 attattatttttattcgagaatatcactttccataaatttagcttacggttgttgtgataagaataagaat 14437909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 99 - 274
Target Start/End: Original strand, 757321 - 757497
Alignment:
Q  99 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 198  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||| ||| ||||||||||||||| |||| || | ||||||||||||||||||| |    
T  757321 tgttggaacattgatgtgatgttggatgaaaaattggaagattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgt 757420  T
Q  199 --gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 274  Q
      ||||| |||||||||| ||||||||||||||| | ||||||||||| ||||||||| |||||||||||||||||||    
T  757421 gggggtctcacataaaatagaacacacacattagtagtgtttaaattgtggtatttaa-tttaaatacttgataatga 757497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 99 - 363
Target Start/End: Original strand, 7570172 - 7570429
Alignment:
Q  99 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 198  Q
    |||||||||||| ||||||| ||||| ||||||||| ||||||||||| ||| ||||||||||||||| |||| || | ||||||||||||||||||| |    
T  7570172 tgttggaacattaatgtgatgttggatgaaaaattgaaagattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgt 7570271  T
Q  199 --gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattatt 296  Q
      ||||||| |||||||| ||||||||| ||||| | ||||||||||| |||||||||||||||||||||||||||||        ||||||||||||||    
T  7570272 gggggtcccgcataaaatagaacacacatattagtagtgtttaaattgtggtatttaattttaaatacttgataatga--taaaaataatagtaattatt 7570369  T
Q  297 actattatttttattcgtgaatatcacttcccataaatttagcctatggtagtcataataagaataa 363  Q
    |       ||||||||| ||||||||||| ||||||||||||  |||||| ||  | ||||||||||    
T  7570370 a-------ttttattcgagaatatcactttccataaatttagtttatggtggttgtgataagaataa 7570429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 99 - 363
Target Start/End: Original strand, 23660446 - 23660703
Alignment:
Q  99 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 198  Q
    |||||||||||||||||||| ||||| ||||||||| ||||||||||| ||| ||||||||||||||| |||| || | ||||||||||||||||||| |    
T  23660446 tgttggaacattgatgtgatgttggatgaaaaattgaaagattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgt 23660545  T
Q  199 g--ggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattatt 296  Q
    |  | |||||||||||||  |||||||||||||| | ||||||||||| ||||||||||||||||||||||||| |||        ||||||||||||||    
T  23660546 ggagctcccacataaaataaaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgatagtga--taaaaataatagtaattatt 23660643  T
Q  297 actattatttttattcgtgaatatcacttcccataaatttagcctatggtagtcataataagaataa 363  Q
    |       ||||||| | ||||||||||| ||||||||||||| |||||| ||  | ||||||||||    
T  23660644 a-------ttttattagagaatatcactttccataaatttagcttatggtggttgtgataagaataa 23660703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 99 - 363
Target Start/End: Original strand, 23665078 - 23665335
Alignment:
Q  99 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 198  Q
    |||||||||||||||||||| ||||| ||||||||| ||||||||||| ||| ||||||||||||||| |||| || | ||||||||||||||||||| |    
T  23665078 tgttggaacattgatgtgatgttggatgaaaaattgaaagattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgt 23665177  T
Q  199 g--ggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattatt 296  Q
    |  | ||||| ||||||| ||||||||||||||| | ||||||||||| ||||||||||||||||||||||||| |||        ||||||||||||||    
T  23665178 ggagctcccatataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgatagtga--taaaaataatagtaattatt 23665275  T
Q  297 actattatttttattcgtgaatatcacttcccataaatttagcctatggtagtcataataagaataa 363  Q
    |       ||||||| | ||||||||||| ||||||||||||| |||||| ||  | ||||||||||    
T  23665276 a-------ttttattagagaatatcactttccataaatttagcttatggtggttgtgataagaataa 23665335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 98 - 344
Target Start/End: Original strand, 12970764 - 12971006
Alignment:
Q  98 ctgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagta 197  Q
    |||||||||||||||| |||| ||||| ||||||| ||||||||||||| ||| ||||||||| ||||| |||| || | ||||||||||||||| |||     
T  12970764 ctgttggaacattgatatgatgttggatgaaaaatcggaagattaaacaccaagtaattatacgttgatttaatgttgtgtgaattgaaaaaataaagtg 12970863  T
Q  198 tg--ggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaatttt-aaatacttgataatgagnnnnnnntaatagtaatta 294  Q
    ||  | ||||||||||||| |||||||||| |||| | ||||||||||| ||||||||||||| ||||||| ||||||||        ||||||||||      
T  12970864 tggtgatcccacataaaatagaacacacactttagtagtgtttaaattgcggtatttaattttaaaatactggataatga-taaaaaataatagtaat-- 12970960  T
Q  295 ttactattatttttattcgtgaatatcacttcccataaatttagcctatg 344  Q
        ||||||||||||||||||||||||||||||||||||||||| ||||    
T  12970961 ----tattatttttattcgtgaatatcacttcccataaatttagcttatg 12971006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 99 - 363
Target Start/End: Complemental strand, 18468351 - 18468094
Alignment:
Q  99 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaa-aaaatagagta 197  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||| ||| |||||||| |||||| |||| || | ||||||||| ||||||||||     
T  18468351 tgttggaacattgatgtgatgttggatgaaaaattggaagattaaacaccaagtaattatagtttgatctaatgttgtgtgaattgaaaaaaatagagtg 18468252  T
Q  198 t-gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattatt 296  Q
    | |||  | |||||| || ||||||||||||||| | ||||||||||| |||||||||||||||||||||||||||||        ||||||||||||||    
T  18468251 tgggggtctacataatatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgataatga--taaaaataatagtaattatt 18468154  T
Q  297 actattatttttattcgtgaatatcacttcccataaatttagcctatggtagtcataataagaataa 363  Q
    |       ||||| ||| ||||||||||| ||||||||||||| |||||| ||  | ||||||||||    
T  18468153 a-------ttttaatcgagaatatcactttccataaatttagcttatggtggttgtgataagaataa 18468094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 98 - 367
Target Start/End: Complemental strand, 46965152 - 46964890
Alignment:
Q  98 ctgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagta 197  Q
    |||||||||||||  ||| || |||||| | |||||||||||||||||| ||| ||||||||||||||| |||| || | |||||||||||||||||||     
T  46965152 ctgttggaacattagtgtaatgttggaaaataaattggaagattaaacaccaaataattatactttgatctaatgttgtgtgaattgaaaaaatagagtg 46965053  T
Q  198 t--gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattat 295  Q
    |  ||| |||||||||||| |||| |||||||||  | |||||||| || |||||||||||||||||||||||||||||        ||| | |||| ||    
T  46965052 tgagggccccacataaaatagaactcacacatta-tagtgtttaaactgcggtatttaattttaaatacttgataatga--------taaaaataataat 46964962  T
Q  296 tactattatttttattcgtgaatatcacttcccataaatttagcctatggtagtcataataagaataagaat 367  Q
     |  |||||||||||||| |||||||||||| |||||||||||| |||||| ||  | ||||||||||||||    
T  46964961 aataattatttttattcgagaatatcacttcacataaatttagcttatggtggttgtgataagaataagaat 46964890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 115 - 274
Target Start/End: Complemental strand, 55326899 - 55326739
Alignment:
Q  115 tgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtatggg--tcccacataaa 212  Q
    |||| ||||| ||||||||||||||||||||| ||| |||||||| |||||| |||| || | ||||||||||||||| ||| ||||  |||||||||||    
T  55326899 tgatgttggatgaaaaattggaagattaaacaccaagtaattata-tttgatctaatgttgtgtgaattgaaaaaatatagtgtgggggtcccacataaa 55326801  T
Q  213 atggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 274  Q
    || ||||||||||||||| | ||||||||||| |||||||||||||||||||||||||||||    
T  55326800 atagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgataatga 55326739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 99 - 274
Target Start/End: Complemental strand, 27710067 - 27709893
Alignment:
Q  99 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatat-aatattatctgaattgaaaaaatagagta 197  Q
    |||||||||||||||||||| ||| | ||||||||||||||||||||| ||| || |||||||||||| | ||| || | |||||||||||||||||||     
T  27710067 tgttggaacattgatgtgatgttgaatgaaaaattggaagattaaacaccaagta-ttatactttgattttaatgttgtgtgaattgaaaaaatagagtg 27709969  T
Q  198 tggg-tcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 274  Q
    |||| ||||||||||||| ||||| ||   |||| | ||||||||||| |||||||||||||||||||||||||||||    
T  27709968 tggggtcccacataaaatagaacatacg--ttagtagtgtttaaattgtggtatttaattttaaatacttgataatga 27709893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 132 - 274
Target Start/End: Original strand, 3656247 - 3656391
Alignment:
Q  132 ttggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaataga--gtatgggtcccacataaaatggaacacacacatta 229  Q
    ||||||||||||||| ||| |||||| |||||||| || | || | |||||||||||||||||  ||| |||||||||||||||| ||||||  ||||||    
T  3656247 ttggaagattaaacaccaagtaattaaactttgatttagtgttgtgtgaattgaaaaaatagaatgtaggggtcccacataaaatagaacacggacatta 3656346  T
Q  230 gcaatgtttaaattgaggtatttaattttaaatacttgataatga 274  Q
    | | ||||||||| | ||||||||||||||||||| |||||||||    
T  3656347 gtagtgtttaaatagtggtatttaattttaaatacctgataatga 3656391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 99 - 261
Target Start/End: Complemental strand, 20175529 - 20175368
Alignment:
Q  99 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 198  Q
    ||||||||||||  |||||| |||||| | |||||| ||||||||||| ||| ||||||||||||||| |||| || | | ||||||||||||||||| |    
T  20175529 tgttggaacattagtgtgatgttggaaaataaattgaaagattaaacaccaagtaattatactttgatctaatgttgtgttaattgaaaaaatagagtgt 20175430  T
Q  199 -gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaa 261  Q
     |||| ||||||||||| ||  ||||||||||| | | |||||||||  |||||||||||||||    
T  20175429 ggggttccacataaaataga--acacacattagtagtatttaaattgcagtatttaattttaaa 20175368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 205 - 344
Target Start/End: Original strand, 39774890 - 39775020
Alignment:
Q  205 cacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattattactattat 304  Q
    |||||||||| ||||||||| ||||| | ||||||||||| |||||||||||||||||||||||||||||        |||||||||||||||           
T  39774890 cacataaaatagaacacacatattagtagtgtttaaattgtggtatttaattttaaatacttgataatga--taaaaataatagtaattatta------- 39774980  T
Q  305 ttttattcgtgaatatcacttcccataaatttagcctatg 344  Q
    ||||||||| ||||||||||| ||||||||||||| ||||    
T  39774981 ttttattcgagaatatcactttccataaatttagcttatg 39775020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 416 - 483
Target Start/End: Complemental strand, 55431475 - 55431408
Alignment:
Q  416 tttgagggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgtaactgaactt 483  Q
    |||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||    
T  55431475 tttgagggtgcaattctcgaacagttttctacagtgcagtagttaaccgcacagttgtagctggactt 55431408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 132 - 274
Target Start/End: Complemental strand, 55432330 - 55432189
Alignment:
Q  132 ttggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtatggg--tcccacataaaatggaacacacacatta 229  Q
    ||||||||||||||| ||| |||||||| |||||| ||||  | | ||||||||||||||| ||| ||||  ||||||| ||||| |||||||||  |||    
T  55432330 ttggaagattaaacaccaagtaattata-tttgatctaatgctgtgtgaattgaaaaaataaagtgtgggggtcccacacaaaatagaacacaca--tta 55432234  T
Q  230 gcaatgtttaaattgaggtatttaattttaaatacttgataatga 274  Q
    | | |||||||||||  ||||||||||||||||| ||||||||||    
T  55432233 gtagtgtttaaattgcagtatttaattttaaatatttgataatga 55432189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 416 - 472
Target Start/End: Original strand, 758301 - 758357
Alignment:
Q  416 tttgagggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttg 472  Q
    |||||||||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  758301 tttgagggtgtaattctcgaacggttttctacagtgcagtagttaaccgcacagttg 758357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 120 - 274
Target Start/End: Original strand, 12964860 - 12965018
Alignment:
Q  120 ttggaagaaaaattggaa-gattaaacatcaactaattatactttgatataatattatctgaattg-aaaaaatagagtatg--ggtcccacataaaatg 215  Q
    ||||| |||||||| ||| ||||||||| ||| ||||||||||||||| |||| ||   ||||||| |||||||||||| ||  |||||||||||||||     
T  12964860 ttggatgaaaaattagaatgattaaacaccaagtaattatactttgatttaatgttgcatgaattgaaaaaaatagagtgtggtggtcccacataaaat- 12964958  T
Q  216 gaacacacacattagcaatgtttaaattgaggtatttaatttt-aaatacttgataatga 274  Q
     |||||| || |||| | ||||||||||| ||||||||||||| ||||| ||||||||||    
T  12964959 aaacacaaactttagtagtgtttaaattgcggtatttaattttaaaatatttgataatga 12965018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 416 - 472
Target Start/End: Original strand, 14438628 - 14438684
Alignment:
Q  416 tttgagggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttg 472  Q
    |||||||||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  14438628 tttgagggtgtaattctcgaacggttttctacagtgcagtagttaaccgcacagttg 14438684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 416 - 472
Target Start/End: Complemental strand, 27709096 - 27709040
Alignment:
Q  416 tttgagggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttg 472  Q
    |||||||||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  27709096 tttgagggtgtaattctcgaacggttttctacagtgcagtagttaaccgcacagttg 27709040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 104 - 171
Target Start/End: Original strand, 32473106 - 32473173
Alignment:
Q  104 gaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataat 171  Q
    ||||||||||||||| ||||| ||||||||||||||||||||| ||| ||||||||||||||| ||||    
T  32473106 gaacattgatgtgatattggatgaaaaattggaagattaaacaccaagtaattatactttgatctaat 32473173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 93 - 262
Target Start/End: Complemental strand, 3426215 - 3426047
Alignment:
Q  93 caaacctgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaata 192  Q
    ||||||||||||||||||  |||||| |||||| | |||||  ||||||||||| ||| |||||||||||| || | || || | ||||||   ||||||    
T  3426215 caaacctgttggaacattagtgtgatgttggaaaataaatttaaagattaaacaccaagtaattatactttaatcttatgttgtgtgaatt---aaaata 3426119  T
Q  193 ga--gtatgggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaat 262  Q
    ||  ||  |||| ||||||||||| |||| |||||||||| | |||||||| || |||||| ||||||||||    
T  3426118 gaatgtgggggtaccacataaaatagaactcacacattagtagtgtttaaactgcggtattcaattttaaat 3426047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 422 - 479
Target Start/End: Original strand, 7571157 - 7571214
Alignment:
Q  422 ggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgtaactga 479  Q
    |||||||||||||||| |||||||| ||||||||||||||||||||||||||| ||||    
T  7571157 ggtgtaattctcgaacggttttctacagtgcagtagttaaccgcacagttgtagctga 7571214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 422 - 483
Target Start/End: Original strand, 25726727 - 25726788
Alignment:
Q  422 ggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgtaactgaactt 483  Q
    ||||||| |||||||| |||||||| ||||||||||||||||||||||||||||||| ||||    
T  25726727 ggtgtaaatctcgaacggttttctacagtgcagtagttaaccgcacagttgtaactgcactt 25726788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 299 - 367
Target Start/End: Complemental strand, 3419938 - 3419870
Alignment:
Q  299 tattatttttattcgtgaatatcacttcccataaatttagcctatggtagtcataataagaataagaat 367  Q
    ||||||||||||||| |||||||||||| |||||||||||| |||||||||  | ||||||||||||||    
T  3419938 tattatttttattcgagaatatcacttcgcataaatttagcatatggtagttgtgataagaataagaat 3419870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 153 - 332
Target Start/End: Original strand, 12111605 - 12111769
Alignment:
Q  153 aattatactttgatataatattatctgaattgaaaaaatagagtatgggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtattt 252  Q
    ||||||||||||||||| |  | | |||||||||||| || ||| |||||| |||||||||| ||||||||      | ||||||||||||  |||||||    
T  12111605 aattatactttgatatagt--tgtgtgaattgaaaaagtaaagtgtgggtctcacataaaatagaacacacc-----gtaatgtttaaatttcggtattt 12111697  T
Q  253 aattttaaatacttgataatgagnnnnnnntaatagtaattattactattatttttattcgtgaatatcacttcccataa 332  Q
    |||||||||| |||||||||||        ||||||||||||||      ||||||||||||||||||||||||||||||    
T  12111698 aattttaaatgcttgataatga--taaaaataatagtaattatt------atttttattcgtgaatatcacttcccataa 12111769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 416 - 472
Target Start/End: Original strand, 23661397 - 23661453
Alignment:
Q  416 tttgagggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttg 472  Q
    |||||||||||||||||||||| |||||||| |||||| ||||||||||||||||||    
T  23661397 tttgagggtgtaattctcgaacggttttctacagtgcattagttaaccgcacagttg 23661453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 416 - 472
Target Start/End: Original strand, 23666056 - 23666112
Alignment:
Q  416 tttgagggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttg 472  Q
    |||||||||||||||||||||| |||||||| |||||| ||||||||||||||||||    
T  23666056 tttgagggtgtaattctcgaacggttttctacagtgcattagttaaccgcacagttg 23666112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 416 - 472
Target Start/End: Original strand, 24038304 - 24038360
Alignment:
Q  416 tttgagggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttg 472  Q
    |||||||||||||||||||||| |||||||| |||||| ||||||||||||||||||    
T  24038304 tttgagggtgtaattctcgaacggttttctacagtgcattagttaaccgcacagttg 24038360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 417 - 472
Target Start/End: Complemental strand, 8883329 - 8883274
Alignment:
Q  417 ttgagggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttg 472  Q
    |||| |||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  8883329 ttgaaggtgtaattctcgaacggttttctacagtgcagtagttaaccgcacagttg 8883274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 416 - 483
Target Start/End: Complemental strand, 20520214 - 20520147
Alignment:
Q  416 tttgagggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgtaactgaactt 483  Q
    ||||| ||||||| ||||||||||||||||| ||| ||||||||||||||||||||||| ||| ||||    
T  20520214 tttgaaggtgtaaatctcgaacagttttctacagtacagtagttaaccgcacagttgtagctggactt 20520147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 179 - 258
Target Start/End: Complemental strand, 7860767 - 7860686
Alignment:
Q  179 gaattgaaaaaatagagtatgg--gtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaatttt 258  Q
    |||||||||||||||||| |||  |||||||||||||| ||||||||||||||  | ||||||||||  |||||||||||||    
T  7860767 gaattgaaaaaatagagtgtggaggtcccacataaaatagaacacacacattaatagtgtttaaattatggtatttaatttt 7860686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 416 - 474
Target Start/End: Complemental strand, 29350400 - 29350342
Alignment:
Q  416 tttgagggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgta 474  Q
    |||||||||||||||||||||| |||||||| ||||||||| |||||| ||||||||||    
T  29350400 tttgagggtgtaattctcgaacggttttctacagtgcagtaattaaccacacagttgta 29350342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 416 - 472
Target Start/End: Original strand, 49971357 - 49971413
Alignment:
Q  416 tttgagggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttg 472  Q
    |||||||||||||||||||||| |||||||| |||| |||||||||| |||||||||    
T  49971357 tttgagggtgtaattctcgaacggttttctacagtgaagtagttaactgcacagttg 49971413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 417 - 472
Target Start/End: Complemental strand, 8069838 - 8069783
Alignment:
Q  417 ttgagggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttg 472  Q
    |||| |||||||||||||||| ||| |||| |||||||||||||||||||||||||    
T  8069838 ttgaaggtgtaattctcgaacggttatctacagtgcagtagttaaccgcacagttg 8069783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 417 - 472
Target Start/End: Complemental strand, 8888089 - 8888034
Alignment:
Q  417 ttgagggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttg 472  Q
    |||| |||||||||||||||| |||||||| |||| ||||||||||||||||||||    
T  8888089 ttgaaggtgtaattctcgaacggttttctacagtgtagtagttaaccgcacagttg 8888034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 416 - 479
Target Start/End: Complemental strand, 46964175 - 46964112
Alignment:
Q  416 tttgagggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgtaactga 479  Q
    ||||||||||||| |||||||| ||||||||||||||| ||||||||| || ||||||| ||||    
T  46964175 tttgagggtgtaaatctcgaacggttttctatagtgcaatagttaaccacatagttgtatctga 46964112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 416 - 474
Target Start/End: Original strand, 2207682 - 2207740
Alignment:
Q  416 tttgagggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgta 474  Q
    |||||||||||||||||||||  |||||||| ||| ||||||||||||||||| |||||    
T  2207682 tttgagggtgtaattctcgaagggttttctacagtacagtagttaaccgcacaattgta 2207740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 417 - 479
Target Start/End: Complemental strand, 3033803 - 3033741
Alignment:
Q  417 ttgagggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgtaactga 479  Q
    |||| |||||||||||||||| |||||||| |||||||||||||| || ||||||||| ||||    
T  3033803 ttgaaggtgtaattctcgaacggttttctacagtgcagtagttaatcgaacagttgtagctga 3033741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 200 - 274
Target Start/End: Complemental strand, 29351263 - 29351189
Alignment:
Q  200 ggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 274  Q
    |||||||||||||||  |||||||||||||  | ||||||||| | ||||||||||||||||||  |||||||||    
T  29351263 ggtcccacataaaataaaacacacacattattagtgtttaaatagtggtatttaattttaaatatctgataatga 29351189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 417 - 474
Target Start/End: Complemental strand, 3672745 - 3672688
Alignment:
Q  417 ttgagggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgta 474  Q
    |||| |||||||||||||||| |||||||| |||||||||||||| || |||||||||    
T  3672745 ttgaaggtgtaattctcgaacggttttctacagtgcagtagttaatcgaacagttgta 3672688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 417 - 474
Target Start/End: Complemental strand, 3692777 - 3692720
Alignment:
Q  417 ttgagggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgta 474  Q
    |||| |||||||||||||||| |||||||| |||||||||||||| || |||||||||    
T  3692777 ttgaaggtgtaattctcgaacggttttctacagtgcagtagttaatcgaacagttgta 3692720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 132 - 214
Target Start/End: Complemental strand, 38891222 - 38891139
Alignment:
Q  132 ttggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtatg-ggtcccacataaaat 214  Q
    ||||||||||||||| | | |||||| |||||||| |||| || | ||||||||||||||| ||| || |||||||||||||||    
T  38891222 ttggaagattaaacaccgagtaattaaactttgatctaatgttttgtgaattgaaaaaatatagtgtgaggtcccacataaaat 38891139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 420 - 483
Target Start/End: Original strand, 3657177 - 3657240
Alignment:
Q  420 agggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgtaactgaactt 483  Q
    ||||||||||||||||||  ||||||| |||||||||||||| |  ||||||||| ||| ||||    
T  3657177 agggtgtaattctcgaacgattttctacagtgcagtagttaatctaacagttgtagctggactt 3657240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 420 - 478
Target Start/End: Complemental strand, 55325932 - 55325874
Alignment:
Q  420 agggtgtaattctcgaacag-ttttctatagtgcagtagttaaccgcacagttgtaactg 478  Q
    |||||||||||||||| | | ||||||| |||||| ||||||||||||||||||||||||    
T  55325932 agggtgtaattctcgatcgggttttctacagtgca-tagttaaccgcacagttgtaactg 55325874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 299 - 346
Target Start/End: Complemental strand, 55432172 - 55432125
Alignment:
Q  299 tattatttttattcgtgaatatcacttcccataaatttagcctatggt 346  Q
    ||||||||||||||| |||||||| |||||||||||||| | ||||||    
T  55432172 tattatttttattcgagaatatcatttcccataaatttaacttatggt 55432125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 417 - 463
Target Start/End: Original strand, 6596291 - 6596337
Alignment:
Q  417 ttgagggtgtaattctcgaacagttttctatagtgcagtagttaacc 463  Q
    |||| |||||||||||||||| |||||||| | ||||||||||||||    
T  6596291 ttgaaggtgtaattctcgaacggttttctacaatgcagtagttaacc 6596337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 422 - 479
Target Start/End: Original strand, 39775667 - 39775724
Alignment:
Q  422 ggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgtaactga 479  Q
    ||||||||| ||||||  ||||||| |||||||||||||| || ||||||||| ||||    
T  39775667 ggtgtaattttcgaacgattttctacagtgcagtagttaatcgaacagttgtagctga 39775724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 416 - 472
Target Start/End: Complemental strand, 3419155 - 3419099
Alignment:
Q  416 tttgagggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttg 472  Q
    ||||||||||||| |||| ||| ||||||||   |||| ||||||||||||||||||    
T  3419155 tttgagggtgtaaatctcaaacggttttctacgatgcaatagttaaccgcacagttg 3419099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 422 - 474
Target Start/End: Original strand, 12965812 - 12965864
Alignment:
Q  422 ggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgta 474  Q
    ||||||||||| ||||||||||||| |||||| ||||||| || ||| |||||    
T  12965812 ggtgtaattcttgaacagttttctacagtgcattagttaatcgaacaattgta 12965864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 422 - 474
Target Start/End: Original strand, 12971572 - 12971624
Alignment:
Q  422 ggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgta 474  Q
    |||||||||||||||| |||||||| | ||||||||||||  | |||||||||    
T  12971572 ggtgtaattctcgaacggttttctacaatgcagtagttaattgaacagttgta 12971624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 422 - 474
Target Start/End: Complemental strand, 18472161 - 18472109
Alignment:
Q  422 ggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgta 474  Q
    ||||||||||||||||  ||||||| | |||||||||||| || |||||||||    
T  18472161 ggtgtaattctcgaacgattttctacaatgcagtagttaatcgaacagttgta 18472109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 426 - 474
Target Start/End: Original strand, 32474623 - 32474671
Alignment:
Q  426 taattctcgaacagttttctatagtgcagtagttaaccgcacagttgta 474  Q
    ||||||||||||  ||||||| |||||||||||||| || |||||||||    
T  32474623 taattctcgaacgattttctacagtgcagtagttaatcgaacagttgta 32474671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 118; Significance: 5e-60; HSPs: 56)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 95 - 363
Target Start/End: Complemental strand, 26342348 - 26342089
Alignment:
Q  95 aacctgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaataga 194  Q
    |||||||||||||||| ||||||| ||||| |||||||| |||||||||| ||||| |||||||||||| || ||||||||| ||||||||||||||||     
T  26342348 aacctgttggaacattaatgtgatgttggatgaaaaattcgaagattaaatatcaagtaattatactttaatttaatattatgtgaattgaaaaaatagt 26342249  T
Q  195 gtatgggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaatta 294  Q
    ||  |||||||||||||||| ||||||||||||||| | ||||||||||| | |||||||||||||||||||||||||||        ||||||||||||    
T  26342248 gtgggggtcccacataaaatagaacacacacattagtagtgtttaaattgtgatatttaattttaaatacttgataatga--taaaaataatagtaatta 26342151  T
Q  295 ttactattatttttattcgtgaatatcacttcccataaatttagcctatggtagtcataataagaataa 363  Q
    |||       ||||||||| ||||||||||| ||||||||||||| |||||| ||  | ||||||||||    
T  26342150 tta-------ttttattcgagaatatcactttccataaatttagcttatggtggttgtgataagaataa 26342089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 99 - 367
Target Start/End: Complemental strand, 3046712 - 3046451
Alignment:
Q  99 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 198  Q
    ||||| ||||||| |||||| ||||||||||||||| ||||||||||| ||| |||||||| ||||||||||  || | ||||||||||||||  ||| |    
T  3046712 tgttgaaacattggtgtgatgttggaagaaaaattgaaagattaaacaccaagtaattataatttgatataaagttgtgtgaattgaaaaaattaagtgt 3046613  T
Q  199 ggg-tcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattatta 297  Q
    ||| ||||||||||||| ||||||||||||||| | ||||||||||| |||||||||||||||||||||||||||||        ||| | |||| ||||    
T  3046612 ggggtcccacataaaatagaacacacacattagtagtgtttaaattgcggtatttaattttaaatacttgataatga--------taaaaataataatta 3046521  T
Q  298 ctattatttttattcgtgaatatcacttcccataaatttagcctatggtagtcataataagaataagaat 367  Q
    |||| ||||||||||||||||||||||||| ||||||||| | |||||| ||  | ||||||||||||||    
T  3046520 ctataatttttattcgtgaatatcacttcctataaatttaacttatggtggttgtgataagaataagaat 3046451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 99 - 372
Target Start/End: Complemental strand, 21672343 - 21672078
Alignment:
Q  99 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 198  Q
    ||||||||||||| |||||| |||||||||||||||||||| |||||| ||| ||||||||||||||| |||  || | ||||||||||||||||| | |    
T  21672343 tgttggaacattggtgtgatgttggaagaaaaattggaagaataaacaccaagtaattatactttgatctaacgttgtgtgaattgaaaaaatagaatgt 21672244  T
Q  199 ggg-tcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattatta 297  Q
    ||| ||||||||||||| || |||||||||||| | ||||||||||| |||||||||||||| ||||||||||||||        ||||||||||         
T  21672243 gggatcccacataaaatagagcacacacattagtactgtttaaattgcggtatttaattttatatacttgataatga--taaaaataatagtaat----- 21672151  T
Q  298 ctattatttttattcgtgaatatcacttcccataaatttagcctatggtagtcataataagaataagaataagaa 372  Q
     |||||||||||||||||||||||||||||||| |||||| | |||||| ||  | |||||||||||||||||||    
T  21672150 -tattatttttattcgtgaatatcacttcccat-aatttaccttatggtggttgtgataagaataagaataagaa 21672078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 99 - 367
Target Start/End: Complemental strand, 12257160 - 12256899
Alignment:
Q  99 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 198  Q
    ||||||||||||| |||||| |||||| | || |||||||||||| || ||| ||||||||||||||| |||| || | | ||||||||||||||||| |    
T  12257160 tgttggaacattggtgtgatgttggaatagaatttggaagattaatcaccaaataattatactttgatttaatgttgtgtaaattgaaaaaatagagtgt 12257061  T
Q  199 ggg-tcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattatta 297  Q
    ||| ||||||||||||| |||||||| |||||| | ||||||||||| |||||||||||||||||||||||||||||        ||||||||||         
T  12257060 ggggtcccacataaaatagaacacacgcattagtagtgtttaaattgtggtatttaattttaaatacttgataatga--taaaaataatagtaat----- 12256968  T
Q  298 ctattatttttattcgtgaatatcacttcccataaatttagcctatggtagtcataataagaataagaat 367  Q
     ||||||||||||||||||||||||||||||||||||||||| |||||| ||  | ||||||||| ||||    
T  12256967 -tattatttttattcgtgaatatcacttcccataaatttagcttatggtggttgtgataagaataggaat 12256899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 99 - 270
Target Start/End: Complemental strand, 4931362 - 4931189
Alignment:
Q  99 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 198  Q
    |||||||||||||||||||| ||||| ||||||||| ||||||||||| ||| |||||||||||||||||||| || | ||||||||||||||||||| |    
T  4931362 tgttggaacattgatgtgatgttggatgaaaaattgaaagattaaacaccaagtaattatactttgatataatgttgtgtgaattgaaaaaatagagtgt 4931263  T
Q  199 --gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgata 270  Q
      ||||||| |||||||| ||||||||||||||| | ||||||||||| |||||||||||||||||||||||||    
T  4931262 gggggtcccgcataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgata 4931189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 99 - 344
Target Start/End: Complemental strand, 3881110 - 3880868
Alignment:
Q  99 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 198  Q
    |||||||| | |||| |||| ||||||||||||||||||||||||| | ||| ||||||||||||||| |||||||   ||||||||||||||||||| |    
T  3881110 tgttggaatagtgatctgatgttggaagaaaaattggaagattaaataccaagtaattatactttgatctaatattgcgtgaattgaaaaaatagagtgt 3881011  T
Q  199 --gggtcccacataaaatggaacacaca---cattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaatt 293  Q
      ||||| |||||||||| |||||||||   |||||| | || |||||||| | |||||||||||||||||||||||||||        ||||||||||     
T  3881010 gggggtctcacataaaatagaacacacacatcattagtagtgcttaaattgtgatatttaattttaaatacttgataatga--taaaaataatagtaat- 3880914  T
Q  294 attactattatttttattcgtgaatatcacttcccataaatttagcctatg 344  Q
         ||||||||||||| ||||||||||||||||||||||||||| ||||    
T  3880913 -----tattatttttatttgtgaatatcacttcccataaatttagcttatg 3880868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 129 - 367
Target Start/End: Original strand, 42625565 - 42625802
Alignment:
Q  129 aaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat--gggtcccacataaaatggaacacacaca 226  Q
    |||||||||||||||||| ||| ||||||||||||||| |||| |||| ||||||||||||||||||| |  |||||||||||||||| |||| ||||||    
T  42625565 aaattggaagattaaacaccaagtaattatactttgatctaatgttatgtgaattgaaaaaatagagtgtgggggtcccacataaaatagaactcacaca 42625664  T
Q  227 ttagcaatgtttaaattgag-----gtatttaattttaaatacttgataatgagnnnnnnntaatagtaattattactattatttttattcgtgaatatc 321  Q
    |||| | ||||||||||| |     ||||||||||||||||||||||||||||        ||||||||||      ||||||||||||||| |||||||    
T  42625665 ttagtagtgtttaaattgcggtgcagtatttaattttaaatacttgataatga--taaaaataatagtaat------tattatttttattcgagaatatc 42625756  T
Q  322 acttcccataaatttagcctatggtagtcataataagaataagaat 367  Q
    |||| ||||||||||| | |||||| ||  | ||||||||||||||    
T  42625757 actttccataaatttaacttatggtggttgtgataagaataagaat 42625802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 199 - 372
Target Start/End: Original strand, 12181811 - 12181979
Alignment:
Q  199 gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattattac 298  Q
    |||||||||||||||| ||||||||||||||| | ||||||||||| |||||||||||||||||||||||||||||        |||||||||| ||       
T  12181811 gggtcccacataaaatagaacacacacattagtagtgtttaaattgcggtatttaattttaaatacttgataatga--taaaaataatagtaataat--- 12181905  T
Q  299 tattatttttattcgtgaatatcacttcccataaatttagcctatggtagtcataataagaataagaataagaa 372  Q
     ||| |||||||||||||||||||||||| ||||||||||| |||||| ||  | |||||||||||||||||||    
T  12181906 cattttttttattcgtgaatatcacttccaataaatttagcttatggtggttgtgataagaataagaataagaa 12181979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 107 - 244
Target Start/End: Original strand, 44508261 - 44508400
Alignment:
Q  107 cattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtatggg--tcc 204  Q
    |||||||||||| ||||| ||||||||||||||||||| ||||| ||||||||||||||| ||||||| | ||||||||||||||||||| ||||  |||    
T  44508261 cattgatgtgatgttggatgaaaaattggaagattaaatatcaagtaattatactttgatctaatattgtgtgaattgaaaaaatagagtgtgggaatcc 44508360  T
Q  205 cacataaaatggaacacacacattagcaatgtttaaattg 244  Q
    || ||||||| ||||||||| ||||| | |||||||||||    
T  44508361 catataaaatagaacacacatattagtagtgtttaaattg 44508400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 103 - 230
Target Start/End: Complemental strand, 2595905 - 2595776
Alignment:
Q  103 ggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtatggg- 201  Q
    ||||||||||||| || ||||||||||||||||||||||||||| ||| |||||| ||||| || |||| || | ||||||||||||||||||| ||||     
T  2595905 ggaacattgatgtaatgttggaagaaaaattggaagattaaacaccaaataattacactttaatctaatgttgtgtgaattgaaaaaatagagtgtgggt 2595806  T
Q  202 -tcccacataaaatggaacacacacattag 230  Q
     ||||||||||||| |||||||||||||||    
T  2595805 atcccacataaaatagaacacacacattag 2595776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 135 - 274
Target Start/End: Original strand, 13313307 - 13313448
Alignment:
Q  135 gaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtatgg--gtcccacataaaatggaacacacacattagca 232  Q
    ||||||||||||| || | | || |||||||| || |||| | ||||||||||||||||||| |||  |||||||||||||| ||||||||||||||| |    
T  13313307 gaagattaaacattaagttactaaactttgatttagtattgtgtgaattgaaaaaatagagtgtggatgtcccacataaaatagaacacacacattagta 13313406  T
Q  233 atgtttaaattgaggtatttaattttaaatacttgataatga 274  Q
     ||||||||| | |||||||||||||||||||||||||||||    
T  13313407 gtgtttaaatagtggtatttaattttaaatacttgataatga 13313448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 137 - 274
Target Start/End: Original strand, 23247554 - 23247692
Alignment:
Q  137 agattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtatg-ggtcccacataaaatggaacacacacattagcaatg 235  Q
    |||||||||| ||| ||||||||||||||| |||| |||| ||||||||||||||||||| |  |||||||| |||||| ||| ||| ||||||| | ||    
T  23247554 agattaaacaccaagtaattatactttgatctaatgttatgtgaattgaaaaaatagagtgtatggtcccacctaaaatagaaaacaaacattagtagtg 23247653  T
Q  236 tttaaattgaggtatttaattttaaatacttgataatga 274  Q
    ||||||||  |||||||||||||||||||||||||||||    
T  23247654 tttaaattacggtatttaattttaaatacttgataatga 23247692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 99 - 272
Target Start/End: Original strand, 10392044 - 10392221
Alignment:
Q  99 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaa--tagagt 196  Q
    ||||||||||||| |||||  |||| || ||||| | ||||||||||| ||| ||||||||||||||| || | || | |||||||||||||  ||||||    
T  10392044 tgttggaacattggtgtgaagttgggaggaaaatcgaaagattaaacaccaagtaattatactttgatctagtgttgtgtgaattgaaaaaaaatagagt 10392143  T
Q  197 atg--ggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataat 272  Q
     ||  || |||||||||||| |||||||||  ||| || ||||||||||| |||||||||||||||||||||||||||    
T  10392144 gtgagggccccacataaaatagaacacacatgttatcagtgtttaaattgcggtatttaattttaaatacttgataat 10392221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 99 - 224
Target Start/End: Complemental strand, 12802421 - 12802295
Alignment:
Q  99 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 198  Q
    ||||||||||||  |||||| |||||| | |||||||||||||||||| ||| |||||||||||| || |||| || | ||||||||||||||||||| |    
T  12802421 tgttggaacattagtgtgatgttggaaaataaattggaagattaaacaccaagtaattatactttaatctaatgttgtgtgaattgaaaaaatagagtgt 12802322  T
Q  199 -gggtcccacataaaatggaacacaca 224  Q
     |||||||||||||||| |||| ||||    
T  12802321 ggggtcccacataaaatagaactcaca 12802295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 132 - 274
Target Start/End: Original strand, 26286146 - 26286292
Alignment:
Q  132 ttggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaa----tagagtatgggtcccacataaaatggaacacacacat 227  Q
    ||||||||||||||| ||| |||||| |||||||| || | || | | |||||||||||    ||| ||  |||||||||||||||| ||||||||||||    
T  26286146 ttggaagattaaacaccaagtaattaaactttgatctagtgttgtataaattgaaaaaaaaaatagtgtgggggtcccacataaaatagaacacacacat 26286245  T
Q  228 tagcaatgtttaaattgaggtatttaattttaaatacttgataatga 274  Q
    ||| | ||||||||| | ||||||||||||||||||  |||||||||    
T  26286246 tagtagtgtttaaatagtggtatttaattttaaataactgataatga 26286292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 139 - 256
Target Start/End: Original strand, 23151683 - 23151804
Alignment:
Q  139 attaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtatgg--gtcccacataaaatggaacacacac--attagcaat 234  Q
    |||||||||||| ||||||||||||||| |||| || | ||||||||||||||| ||| |||  ||||| |||||||| ||||||||||  ||||| | |    
T  23151683 attaaacatcaagtaattatactttgatctaatgttgtgtgaattgaaaaaataaagtgtgggagtcccgcataaaatagaacacacacatattagtagt 23151782  T
Q  235 gtttaaattgaggtatttaatt 256  Q
    |||||||||||| |||||||||    
T  23151783 gtttaaattgagatatttaatt 23151804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 416 - 474
Target Start/End: Original strand, 44423070 - 44423128
Alignment:
Q  416 tttgagggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgta 474  Q
    |||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||    
T  44423070 tttgagggtgtaattctcgaacggttttctacagtgcagtagttaaccgcacagttgta 44423128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 418 - 474
Target Start/End: Complemental strand, 4930393 - 4930337
Alignment:
Q  418 tgagggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgta 474  Q
    |||||||||||||||||||| |||||||| |||||||||||||||||||||||||||    
T  4930393 tgagggtgtaattctcgaacggttttctacagtgcagtagttaaccgcacagttgta 4930337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 416 - 486
Target Start/End: Complemental strand, 12799572 - 12799502
Alignment:
Q  416 tttgagggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgtaactgaacttatt 486  Q
    |||||||||||||||||||||| |||||||  | ||||||||||||||||||||||||| ||| |||||||    
T  12799572 tttgagggtgtaattctcgaacggttttctgcaatgcagtagttaaccgcacagttgtagctggacttatt 12799502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 416 - 486
Target Start/End: Original strand, 42626524 - 42626594
Alignment:
Q  416 tttgagggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgtaactgaacttatt 486  Q
    ||||||||||||||||||||||  ||||||| ||||||||| ||||||||||||||||| ||| |||||||    
T  42626524 tttgagggtgtaattctcgaacgattttctacagtgcagtaattaaccgcacagttgtagctggacttatt 42626594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 152 - 274
Target Start/End: Complemental strand, 4580551 - 4580427
Alignment:
Q  152 taattatactttgatataatattatctgaattgaaaaaatagagtat--gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggta 249  Q
    |||||| |||||||| || | || | |||||| |||||||||||| |  |||||||| ||||||| ||||||||||||||| | |||||| || | ||||    
T  4580551 taattaaactttgatttagtgttgtgtgaattaaaaaaatagagtgtaggggtcccatataaaatagaacacacacattagtagtgtttatatagtggta 4580452  T
Q  250 tttaattttaaatacttgataatga 274  Q
    ||||||| ||||||| |||||||||    
T  4580451 tttaattctaaatacctgataatga 4580427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 417 - 474
Target Start/End: Original strand, 25543296 - 25543353
Alignment:
Q  417 ttgagggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgta 474  Q
    |||| |||||||||||||||| |||||||| |||||||||||||||||||||||||||    
T  25543296 ttgaaggtgtaattctcgaacggttttctacagtgcagtagttaaccgcacagttgta 25543353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 299 - 367
Target Start/End: Complemental strand, 27239100 - 27239032
Alignment:
Q  299 tattatttttattcgtgaatatcacttcccataaatttagcctatggtagtcataataagaataagaat 367  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||| ||  | |||| |||||||||    
T  27239100 tattatttttattcgtgaatatcacttcccataaatttagcttatggttgttgtgataacaataagaat 27239032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 416 - 479
Target Start/End: Complemental strand, 3284890 - 3284827
Alignment:
Q  416 tttgagggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgtaactga 479  Q
    |||||||||||||||||||||| ||||||||| |||| |||||||||||||| |||||| ||||    
T  3284890 tttgagggtgtaattctcgaacggttttctattgtgcggtagttaaccgcacggttgtagctga 3284827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 416 - 483
Target Start/End: Complemental strand, 4579670 - 4579603
Alignment:
Q  416 tttgagggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgtaactgaactt 483  Q
    ||||||||||||||||| |||| |||||||| |||||||||||||| |||||||||||| ||| ||||    
T  4579670 tttgagggtgtaattcttgaacggttttctacagtgcagtagttaatcgcacagttgtagctggactt 4579603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 201 - 367
Target Start/End: Original strand, 10387410 - 10387570
Alignment:
Q  201 gtcccacataaaatggaacacacacattagcaa-tgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattattact 299  Q
    |||||| ||||||| ||||||||| |||||||  ||||||||||| |||||||||||||||||| ||||||||||         || | || || ||| |    
T  10387410 gtcccatataaaatagaacacacatattagcaggtgtttaaattgtggtatttaattttaaatatttgataatga----taaagaaaaatagtt-ttatt 10387504  T
Q  300 attatttttattcgtgaatatcacttcccataaatttagcctatggtagtcataataagaataagaat 367  Q
    ||  ||||| |||||||||||||||||||||||||||||| |||||| ||  | ||||||||||||||    
T  10387505 at--ttttttttcgtgaatatcacttcccataaatttagcttatggttgttgtgataagaataagaat 10387570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 417 - 472
Target Start/End: Complemental strand, 23866229 - 23866174
Alignment:
Q  417 ttgagggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttg 472  Q
    |||| |||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  23866229 ttgaaggtgtaattctcgaacggttttctacagtgcagtagttaaccgcacagttg 23866174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 224 - 367
Target Start/End: Complemental strand, 8269312 - 8269177
Alignment:
Q  224 acattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattattactattatttttattcgtgaatatcac 323  Q
    ||||||| | |||||||| || | |||||||||||||||||||||||||||        |||||||||||||||      ||||||||||||||||||||    
T  8269312 acattagaagtgtttaaactgcgatatttaattttaaatacttgataatga--taaaaataatagtaattatta------tttttattcgtgaatatcac 8269221  T
Q  324 ttcccataaatttagcctatggtagtcataataagaataagaat 367  Q
    || ||||||||||| | |||||| ||  | ||||| ||||||||    
T  8269220 tttccataaatttaacttatggtggttgtgataaggataagaat 8269177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 417 - 472
Target Start/End: Original strand, 44510611 - 44510666
Alignment:
Q  417 ttgagggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttg 472  Q
    |||| |||||||||||||||| |||||||| ||||||| |||||||||||||||||    
T  44510611 ttgaaggtgtaattctcgaacggttttctacagtgcagaagttaaccgcacagttg 44510666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 416 - 474
Target Start/End: Original strand, 10388300 - 10388358
Alignment:
Q  416 tttgagggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgta 474  Q
    ||||||||||||| ||||||||| |||| || |||||||||||||| ||||||||||||    
T  10388300 tttgagggtgtaaatctcgaacaattttttagagtgcagtagttaatcgcacagttgta 10388358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 221 - 367
Target Start/End: Complemental strand, 12800405 - 12800267
Alignment:
Q  221 cacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattattactattatttttattcgtgaatat 320  Q
    |||||||||| | |||||||||||  ||||||||||||||||||||||||||||        ||||||||||      |||||||||||||||  |||||    
T  12800405 cacacattagtagtgtttaaattgcagtatttaattttaaatacttgataatga--taaaaataatagtaat------tattatttttattcgaaaatat 12800314  T
Q  321 cacttcccataaatttagcctatggtagtcataataagaataagaat 367  Q
     |||| ||||||||||||  ||| || ||  ||||||||||||||||    
T  12800313 aactttccataaatttaggttatagtggttgtaataagaataagaat 12800267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 422 - 483
Target Start/End: Original strand, 13142840 - 13142901
Alignment:
Q  422 ggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgtaactgaactt 483  Q
    ||||||| |||||||||||||||||||||||| |||||| ||  ||||||||| ||||||||    
T  13142840 ggtgtaaatctcgaacagttttctatagtgcaatagttagccttacagttgtagctgaactt 13142901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 299 - 367
Target Start/End: Original strand, 10392241 - 10392309
Alignment:
Q  299 tattatttttattcgtgaatatcacttcccataaatttagcctatggtagtcataataagaataagaat 367  Q
    |||||||||||||| |||||||||||||||||||||||||  ||||||  |  | ||||||||||||||    
T  10392241 tattatttttattcatgaatatcacttcccataaatttaggttatggtgattgtgataagaataagaat 10392309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 206 - 272
Target Start/End: Original strand, 9814941 - 9815008
Alignment:
Q  206 acataaaatggaacacacacattagcaatgtttaaattgaggtatttaa-ttttaaatacttgataat 272  Q
    ||||||||| ||||||| ||||||| | | ||||||||| ||||||||| ||||||||||||||||||    
T  9814941 acataaaatagaacacatacattagtagtttttaaattgcggtatttaatttttaaatacttgataat 9815008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 206 - 272
Target Start/End: Original strand, 10716866 - 10716933
Alignment:
Q  206 acataaaatggaacacacacattagcaatgtttaaattgaggtatttaa-ttttaaatacttgataat 272  Q
    ||||||||| ||||||| ||||||| | | ||||||||| ||||||||| ||||||||||||||||||    
T  10716866 acataaaatagaacacatacattagtagtttttaaattgcggtatttaatttttaaatacttgataat 10716933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 299 - 346
Target Start/End: Original strand, 23247891 - 23247938
Alignment:
Q  299 tattatttttattcgtgaatatcacttcccataaatttagcctatggt 346  Q
    |||||||||||||||| |||||||||||||||||||| ||| ||||||    
T  23247891 tattatttttattcgtaaatatcacttcccataaattgagcttatggt 23247938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 416 - 483
Target Start/End: Complemental strand, 30258262 - 30258195
Alignment:
Q  416 tttgagggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgtaactgaactt 483  Q
    ||||| ||||||| | ||||||| ||||||| |||||||||||||||||||| |||||| ||| ||||    
T  30258262 tttgaaggtgtaaatttcgaacaattttctacagtgcagtagttaaccgcactgttgtagctggactt 30258195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 132 - 260
Target Start/End: Complemental strand, 30259368 - 30259238
Alignment:
Q  132 ttggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtatgg--gtcccacataaaatggaacacacacatta 229  Q
    ||||||||||||| | ||| |||||| |||||||| || | || | | ||||||||||||||||| |||  |  ||||||||||| || |||| ||||||    
T  30259368 ttggaagattaaataccaagtaattaaactttgatctagtgttttgtaaattgaaaaaatagagtgtgggagatccacataaaatagatcacatacatta 30259269  T
Q  230 gcaatgtttaaattgaggtatttaattttaa 260  Q
    | | ||||||||| | | |||||||||||||    
T  30259268 gtagtgtttaaatagtgatatttaattttaa 30259238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 416 - 474
Target Start/End: Complemental strand, 3880157 - 3880099
Alignment:
Q  416 tttgagggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgta 474  Q
    |||||| |||||||||||||||  ||||||| |||||||||||||||| || |||||||    
T  3880157 tttgagagtgtaattctcgaacgattttctacagtgcagtagttaaccacatagttgta 3880099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 417 - 474
Target Start/End: Complemental strand, 9008324 - 9008267
Alignment:
Q  417 ttgagggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgta 474  Q
    |||| ||||||||||||||||  ||||||| |||||||||||||| | ||||||||||    
T  9008324 ttgaaggtgtaattctcgaacgattttctacagtgcagtagttaatcacacagttgta 9008267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 423 - 472
Target Start/End: Original strand, 9650904 - 9650953
Alignment:
Q  423 gtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttg 472  Q
    ||||||||||||||| |||||||| ||||||||||| ||||| |||||||    
T  9650904 gtgtaattctcgaacggttttctacagtgcagtagtcaaccgtacagttg 9650953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 422 - 479
Target Start/End: Original strand, 13314175 - 13314232
Alignment:
Q  422 ggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgtaactga 479  Q
    |||||||||||||||| |||||||| ||||||||||||||  | ||||||||| ||||    
T  13314175 ggtgtaattctcgaacggttttctacagtgcagtagttaattgaacagttgtagctga 13314232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 299 - 344
Target Start/End: Complemental strand, 16373293 - 16373248
Alignment:
Q  299 tattatttttattcgtgaatatcacttcccataaatttagcctatg 344  Q
    ||||||||||||||||| ||||||||| ||||||||||||| ||||    
T  16373293 tattatttttattcgtgtatatcactttccataaatttagcttatg 16373248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 299 - 344
Target Start/End: Original strand, 27246697 - 27246742
Alignment:
Q  299 tattatttttattcgtgaatatcacttcccataaatttagcctatg 344  Q
    ||||||||||||||||| |||||||||| |||||||||||| ||||    
T  27246697 tattatttttattcgtggatatcacttctcataaatttagcttatg 27246742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 422 - 474
Target Start/End: Original strand, 26287084 - 26287136
Alignment:
Q  422 ggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgta 474  Q
    |||||||  |||||||  ||||||||||||||||||||||| |||||||||||    
T  26287084 ggtgtaaagctcgaacgattttctatagtgcagtagttaactgcacagttgta 26287136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 299 - 346
Target Start/End: Complemental strand, 2595771 - 2595724
Alignment:
Q  299 tattatttttattcgtgaatatcacttcccataaatttagcctatggt 346  Q
    |||| |||||||||| ||||||||||||||||||| ||||| ||||||    
T  2595771 tattctttttattcgagaatatcacttcccataaacttagcttatggt 2595724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 299 - 338
Target Start/End: Original strand, 6590164 - 6590203
Alignment:
Q  299 tattatttttattcgtgaatatcacttcccataaatttag 338  Q
    ||||||||||||||||| |||||| |||||||||||||||    
T  6590164 tattatttttattcgtggatatcatttcccataaatttag 6590203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 416 - 483
Target Start/End: Original strand, 6590916 - 6590983
Alignment:
Q  416 tttgagggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgtaactgaactt 483  Q
    |||||||||||||||||| |||  ||||||| | || ||||||||| | ||||||| |||||||||||    
T  6590916 tttgagggtgtaattctcaaacgattttctacaatgtagtagttaatcacacagttataactgaactt 6590983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 416 - 483
Target Start/End: Complemental strand, 27238404 - 27238337
Alignment:
Q  416 tttgagggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgtaactgaactt 483  Q
    ||||||||||||| ||||||||  ||||||| |||||||||||||| | | |||||||| ||| ||||    
T  27238404 tttgagggtgtaaatctcgaacgattttctacagtgcagtagttaagcacgcagttgtagctggactt 27238337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 416 - 474
Target Start/End: Original strand, 23246866 - 23246924
Alignment:
Q  416 tttgagggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgta 474  Q
    ||||||||||||||| | |||| ||||||||||   |||||||||| ||||||||||||    
T  23246866 tttgagggtgtaattttggaacggttttctataaaacagtagttaatcgcacagttgta 23246924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 422 - 483
Target Start/End: Complemental strand, 12254235 - 12254174
Alignment:
Q  422 ggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgtaactgaactt 483  Q
    ||||||| |||| ||| |||||||| |  ||| |||||||||||||||||||| ||||||||    
T  12254235 ggtgtaaatctcaaacggttttctacacagcattagttaaccgcacagttgtagctgaactt 12254174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 152 - 196
Target Start/End: Complemental strand, 8269394 - 8269350
Alignment:
Q  152 taattatactttgatataatattatctgaattgaaaaaatagagt 196  Q
    ||||||||||||||| ||||||| | ||||||||| |||||||||    
T  8269394 taattatactttgatctaatattgtgtgaattgaataaatagagt 8269350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 299 - 339
Target Start/End: Original strand, 9815027 - 9815067
Alignment:
Q  299 tattatttttattcgtgaatatcacttcccataaatttagc 339  Q
    |||||||||||||| | ||||||||||| ||||||||||||    
T  9815027 tattatttttattcatcaatatcacttctcataaatttagc 9815067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 299 - 339
Target Start/End: Original strand, 10716952 - 10716992
Alignment:
Q  299 tattatttttattcgtgaatatcacttcccataaatttagc 339  Q
    |||||||||||||| | ||||||||||| ||||||||||||    
T  10716952 tattatttttattcatcaatatcacttctcataaatttagc 10716992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 430 - 474
Target Start/End: Complemental strand, 21671343 - 21671299
Alignment:
Q  430 tctcgaacagttttctatagtgcagtagttaaccgcacagttgta 474  Q
    ||||||||  ||||||| | |||||||||||||||||||||||||    
T  21671343 tctcgaacgattttctacactgcagtagttaaccgcacagttgta 21671299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 238 - 274
Target Start/End: Original strand, 44508427 - 44508463
Alignment:
Q  238 taaattgaggtatttaattttaaatacttgataatga 274  Q
    ||||||| |||||||||||||||||| ||||||||||    
T  44508427 taaattgtggtatttaattttaaatatttgataatga 44508463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 117; Significance: 2e-59; HSPs: 62)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 99 - 363
Target Start/End: Complemental strand, 8694852 - 8694595
Alignment:
Q  99 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 198  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||| ||| ||||||||||||||| |||| || | ||||||||||||||||||| |    
T  8694852 tgttggaacattgatgtgatgttggatgaaaaattggaagattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgt 8694753  T
Q  199 --gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattatt 296  Q
      |||||||||||||||| ||||||||||||||| | ||||||||||| |||||||||||||||||||||||||||||        ||||||||||||||    
T  8694752 gggggtcccacataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgataatga--taaaaataatagtaattatt 8694655  T
Q  297 actattatttttattcgtgaatatcacttcccataaatttagcctatggtagtcataataagaataa 363  Q
    |       ||||||||| ||||||||||| ||||||||||||  |||||| ||  | ||||||||||    
T  8694654 a-------ttttattcgagaatatcactttccataaatttaggttatggtggttgtgataagaataa 8694595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 98 - 363
Target Start/End: Original strand, 31728322 - 31728579
Alignment:
Q  98 ctgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagta 197  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||||| ||| |||||||| |||||| |||| || | |||||||||||||||||||     
T  31728322 ctgttggaacattgatgtgatgttggatgaaaaattggaagattaaacaccaagtaattataatttgatctaatgttgtgtgaattgaaaaaatagagtg 31728421  T
Q  198 t-gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattatt 296  Q
    | |||||||||||||||| ||||||||||||||| | ||||||||||| ||||||||||||||||||||| |||||||        ||||||||||||||    
T  31728422 tggggtcccacataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttcataatga--taaaaataatagtaattatt 31728519  T
Q  297 actattatttttattcgtgaatatcacttcccataaatttagcctatggtagtcataataagaataa 363  Q
    |       ||||||||| |||||||||||  |||||||||||| |||||| ||  | ||||||||||    
T  31728520 a-------ttttattcgagaatatcacttttcataaatttagcttatggtggttgtgataagaataa 31728579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 98 - 363
Target Start/End: Complemental strand, 31274654 - 31274396
Alignment:
Q  98 ctgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagta 197  Q
    ||||||||||||||||||||| ||||| ||||||||| ||||||||||| ||| ||||||||||||||| |||| || | |||||||||||||||||||     
T  31274654 ctgttggaacattgatgtgatgttggatgaaaaattgaaagattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtg 31274555  T
Q  198 t--gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattat 295  Q
    |  ||||||| |||||||| ||||||||||||||| | ||||||||||| ||||||||||||||||||||||| | |||        |||||||||||||    
T  31274554 tgggggtcccgcataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgacagtga--taaaaataatagtaattat 31274457  T
Q  296 tactattatttttattcgtgaatatcacttcccataaatttagcctatggtagtcataataagaataa 363  Q
    ||       ||||||||| ||||||||||| ||||||||||||| |||||| ||  | ||||||||||    
T  31274456 ta-------ttttattcgagaatatcactttccataaatttagcttatggtggttgtgataagaataa 31274396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 99 - 363
Target Start/End: Original strand, 37263520 - 37263777
Alignment:
Q  99 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 198  Q
    |||||||||||||||||||| || || ||||||||| ||||||||||| ||| ||||||||||||||| |||| || | ||||||||||||||||||| |    
T  37263520 tgttggaacattgatgtgatgtttgatgaaaaattgaaagattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgt 37263619  T
Q  199 --gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattatt 296  Q
      ||||||| |||||||| ||||||||||||||| | ||||||||||| ||||||||||||||||||||||||| |||        ||||||||||||||    
T  37263620 gggggtcccgcataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgatagtga--taaaaataatagtaattatt 37263717  T
Q  297 actattatttttattcgtgaatatcacttcccataaatttagcctatggtagtcataataagaataa 363  Q
    |       ||||||||| ||||||||||| ||||||||||||| |||||| ||  | ||||||||||    
T  37263718 a-------ttttattcgagaatatcactttccataaatttagcttatggtggttgtgataagaataa 37263777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 99 - 367
Target Start/End: Complemental strand, 16422184 - 16421923
Alignment:
Q  99 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 198  Q
    ||||||||||||| |||||| |||||| | |||||||||||||||||| ||| ||||||||||||||| |||| || | ||||||||||||||||||| |    
T  16422184 tgttggaacattg-tgtgatgttggaaaataaattggaagattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgt 16422086  T
Q  199 ggg--tcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattatt 296  Q
    |||  ||||||||||||| |||||||| |||||| | ||||||||||| ||||||||||||| |||||||||||||||        ||||||||||        
T  16422085 gggggtcccacataaaatagaacacacgcattagtagtgtttaaattgcggtatttaattttcaatacttgataatga--taaaaataatagtaat---- 16421992  T
Q  297 actattatttttattcgtgaatatcacttcccataaatttagcctatggtagtcataataagaataagaat 367  Q
      ||||||||||||||| ||||||||||| ||||||||||| | |||||| ||  | ||||||||||||||    
T  16421991 --tattatttttattcgagaatatcactttccataaatttaacttatggtggttgtgataagaataagaat 16421923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 99 - 274
Target Start/End: Original strand, 5270380 - 5270557
Alignment:
Q  99 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 198  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||| ||| ||||||||||||||| |||| || | ||||||||||||||||| | |    
T  5270380 tgttggaacattgatgtgatgttggatgaaaaattggaagattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagaatgt 5270479  T
Q  199 -gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatac-ttgataatga 274  Q
     |||||||||||||||| ||||||||||||||| | | ||||||||| ||||||||||||||||||| ||||||||||    
T  5270480 ggggtcccacataaaatagaacacacacattagtagtatttaaattgtggtatttaattttaaatactttgataatga 5270557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 99 - 367
Target Start/End: Original strand, 13064770 - 13065028
Alignment:
Q  99 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 198  Q
    ||||||||||||| |||||| |||||||||||||||||| | |||| | ||| ||||||||||||||| |||| ||   ||||||||||||||||||| |    
T  13064770 tgttggaacattggtgtgatgttggaagaaaaattggaaaaataaataccaagtaattatactttgatctaatgtt---tgaattgaaaaaatagagtgt 13064866  T
Q  199 ggg--tcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattatt 296  Q
    |||  ||||||||||||| |||||||||||| |  | ||||||||||| |||||||||||||||||||||||||||||        ||||||||||        
T  13064867 gggggtcccacataaaatagaacacacacatcaatagtgtttaaattgcggtatttaattttaaatacttgataatga--taaaaataatagtaat---- 13064960  T
Q  297 actattatttttattcgtgaatatcacttcccataaatttagcctatggtagtcataataagaataagaat 367  Q
      |||||||||||||||||||||||||||||||| |||||||| |||||| ||  | ||||||||||||||    
T  13064961 --tattatttttattcgtgaatatcacttcccat-aatttagcttatggtggttgtgataagaataagaat 13065028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 99 - 367
Target Start/End: Original strand, 33467960 - 33468216
Alignment:
Q  99 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 198  Q
    ||||||||||||  |||||| ||||||||||||||| ||||||||||| ||| ||||||||||||||| |||| || | | ||||||||||||||||| |    
T  33467960 tgttggaacattagtgtgatgttggaagaaaaattgaaagattaaacaccaagtaattatactttgatctaatgttgtgtaaattgaaaaaatagagtgt 33468059  T
Q  199 -gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattatta 297  Q
     || ||||||||||||| ||||||||||||||| | |||||||||||  ||||||||||||||||||||||||||||        ||||||||||         
T  33468060 aggttcccacataaaatagaacacacacattagtagtgtttaaattgtagtatttaattttaaatacttgataatga--taaaaataatagtaat----- 33468152  T
Q  298 ctattatttttattcgtgaatatcacttcccataaatttagcctatggtagtcataataagaataagaat 367  Q
     |||||||||||     ||||||||||||||||||||||||| |||||| || || ||||||||||||||    
T  33468153 -tattattttta-----gaatatcacttcccataaatttagcttatggtggttatgataagaataagaat 33468216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 99 - 363
Target Start/End: Original strand, 29349164 - 29349422
Alignment:
Q  99 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 198  Q
    ||||||||||||| |||||| ||||||| |||| ||||||||||||||  || ||||||||||||||| || | ||   ||||||||||||||||||| |    
T  29349164 tgttggaacattggtgtgatgttggaaggaaaactggaagattaaacactaagtaattatactttgat-tagtgttgagtgaattgaaaaaatagagtgt 29349262  T
Q  199 g-ggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattatta 297  Q
    | ||||||||||||||| |||| |||||||||||| ||||||||||| |||||||||||||||||||| ||||||||        ||||| |||||||||    
T  29349263 gaggtcccacataaaatagaactcacacattagcagtgtttaaattgcggtatttaattttaaatactggataatga-taaaaaataatattaattatta 29349361  T
Q  298 ctattatttttattcgtgaatatcacttcccataaatttagcctatggtagtcataataagaataa 363  Q
          ||||||||||||||||||| |||||||||||||||| |||||| || || ||||||||||    
T  29349362 -----ttttttattcgtgaatatcatttcccataaatttagcttatggttgttatgataagaataa 29349422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 111 - 367
Target Start/End: Complemental strand, 55252772 - 55252521
Alignment:
Q  111 gatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaa-tagagtatgg--gtcccac 207  Q
    |||||||| ||||| |||||||||||||| |||||||||| ||||||||||||||| |||| || | ||||||||||||| |||||| |||  |||||||    
T  55252772 gatgtgatgttggatgaaaaattggaagactaaacatcaagtaattatactttgatttaatgttgtgtgaattgaaaaaaatagagtgtggtggtcccac 55252673  T
Q  208 ataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattattactattatttt 307  Q
    ||||||| ||||||||||||||| | ||||||||||| |||||||||||||||||||||||||||||        |||||| |||      |||||||||    
T  55252672 ataaaatagaacacacacattagtagtgtttaaattgcggtatttaattttaaatacttgataatga--taaaaataatagcaat------tattatttt 55252581  T
Q  308 tattcgtgaatatcacttcccataaatttagcctatggtagtcataataagaataagaat 367  Q
    |||| | |||||| |||| ||||||||||||| |||||| ||  | ||||||||||||||    
T  55252580 tattggagaatattactttccataaatttagcttatggtggttgtgataagaataagaat 55252521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 98 - 363
Target Start/End: Original strand, 37258821 - 37259077
Alignment:
Q  98 ctgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagta 197  Q
    ||||||||||||||||||||| ||||| ||||||||| ||||||||||| ||| ||||||  ||||||| |||| || | |||||||||||||||||||     
T  37258821 ctgttggaacattgatgtgatgttggatgaaaaattgaaagattaaacaccaagtaatta--ctttgatctaatgttgtgtgaattgaaaaaatagagtg 37258918  T
Q  198 tggg--tcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattat 295  Q
    ||||  |||| |||||||| ||||||||||||||| | ||||||||||| ||||||||||||||||||||||||| |||        |||||||||||||    
T  37258919 tgggggtcccgcataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgatagtga--taaaaataatagtaattat 37259016  T
Q  296 tactattatttttattcgtgaatatcacttcccataaatttagcctatggtagtcataataagaataa 363  Q
    ||       ||||||| | ||||||||||| ||||||||||||| |||||| ||  | ||||||||||    
T  37259017 ta-------ttttattagagaatatcactttccataaatttagcttatggtggttgtgataagaataa 37259077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 102 - 367
Target Start/End: Complemental strand, 51699065 - 51698803
Alignment:
Q  102 tggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtatggg 201  Q
    |||||||||  | |||| |||||| | |||||| ||||||||||| ||| ||||||||||||||  |||| ||   ||||||||||||||||||| ||||    
T  51699065 tggaacattagtttgatgttggaaaataaattgaaagattaaacaccaaataattatactttgaactaatgttgcgtgaattgaaaaaatagagtgtggg 51698966  T
Q  202 --tcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattattact 299  Q
      ||||||||||||| ||||||||||||||| | ||||||||||| ||||||||||||||||| |||||||||||         ||||||||||||||      
T  51698965 ggtcccacataaaatagaacacacacattagtagtgtttaaattgcggtatttaattttaaatgcttgataatgataaaaaaaaaatagtaattatta-- 51698868  T
Q  300 attatttttattcgtgaatatcacttcccataaatttagcctatggtagtcataataagaataagaat 367  Q
        |||||||||| ||||||||||| ||||||||||||| |||||| ||  | ||||||||||||||    
T  51698867 ---ttttttattcgagaatatcactttccataaatttagcttatggtggttgtgataagaataagaat 51698803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 98 - 274
Target Start/End: Original strand, 5925760 - 5925929
Alignment:
Q  98 ctgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagta 197  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||| | ||| |||||||||||||||||||| || | |||||||||||||| |        
T  5925760 ctgttggaacattgatgtgatgttggatgaaaaattggaagattaaataccaagtaattatactttgatataatgttgtgtgaattgaaaaaatgg---- 5925855  T
Q  198 tgggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 274  Q
     |||||||||||||||| ||  ||||||||||| | ||||||||||  |||||||||||||||||||||||||||||    
T  5925856 -gggtcccacataaaataga--acacacattagtagtgtttaaattatggtatttaattttaaatacttgataatga 5925929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 99 - 344
Target Start/End: Complemental strand, 2820930 - 2820693
Alignment:
Q  99 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 198  Q
    ||||||||||||| |||||  ||||||| ||||||||||||||||||| ||| |||||||| |||||| || | || | |||||||||||| |||||| |    
T  2820930 tgttggaacattggtgtgaagttggaaggaaaattggaagattaaacaccaagtaattata-tttgatctagtgttgtgtgaattgaaaaattagagtgt 2820832  T
Q  199 ggg--tcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattatt 296  Q
    |||  ||||||||||||| ||||||||||||||| | ||||||||||| ||||||||||||||| || ||||||||||        ||||||||||        
T  2820831 gggggtcccacataaaatagaacacacacattagtagtgtttaaattgcggtatttaattttaattatttgataatga--taaaaataatagtaat---- 2820738  T
Q  297 actattatttttattcgtgaatatcacttcccataaatttagcctatg 344  Q
      ||||||||||||| ||||||||||||||||||||||||||| ||||    
T  2820737 --tattatttttatt-gtgaatatcacttcccataaatttagcttatg 2820693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 99 - 335
Target Start/End: Original strand, 12822867 - 12823097
Alignment:
Q  99 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 198  Q
    ||||||||||||  |||||| |||||| | |||||||||||| ||||| ||| ||||||||||||||| |||| || | ||||||||||||||||||| |    
T  12822867 tgttggaacattagtgtgatgttggaaaataaattggaagatcaaacaccaaataattatactttgatctaatgttgtgtgaattgaaaaaatagagtgt 12822966  T
Q  199 --gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattatt 296  Q
      |||||||||||||||| |||| |||||||||| | |||||||| || ||||||||||||||||||||| |||||||        ||||||||||        
T  12822967 gggggtcccacataaaatagaactcacacattagtagtgtttaaactgtggtatttaattttaaatactttataatga--taaaaataatagtaat---- 12823060  T
Q  297 actattatttttattcgtgaatatcacttcccataaatt 335  Q
      ||||||||||||||  |||||||||||||||||||||    
T  12823061 --tattatttttattccagaatatcacttcccataaatt 12823097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 99 - 256
Target Start/End: Complemental strand, 19907427 - 19907269
Alignment:
Q  99 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 198  Q
    ||||||||||||| |||||| ||||||||||||||| ||||||||||| ||| |||||||| |||||| || | || | ||||||||||||||| ||| |    
T  19907427 tgttggaacattggtgtgatgttggaagaaaaattgaaagattaaacaccaagtaattatattttgatctagtgttgtgtgaattgaaaaaataaagtgt 19907328  T
Q  199 -gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaatt 256  Q
     ||||| |||||||||| ||||||||||||||||| ||||||||||| |||||||||||    
T  19907327 ggggtctcacataaaatagaacacacacattagcagtgtttaaattgcggtatttaatt 19907269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 99 - 367
Target Start/End: Complemental strand, 13060606 - 13060343
Alignment:
Q  99 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaa-aaaatagagta 197  Q
    ||||||||||||  |||||| ||| || | |||||||||||||||||  ||| ||||||||||||||| ||||||| | ||||||||| ||||||||||     
T  13060606 tgttggaacattagtgtgatgttgaaaaataaattggaagattaaaccccaagtaattatactttgatctaatattgtgtgaattgaaaaaaatagagtg 13060507  T
Q  198 tg--ggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattat 295  Q
    ||  |||| |||||||||  |||| |||||||| | | ||||||||||| |||||||||||||||||||||||||||||        ||||||||||       
T  13060506 tggtggtcacacataaaaaagaactcacacattggtagtgtttaaattgcggtatttaattttaaatacttgataatga--taacaataatagtaat--- 13060412  T
Q  296 tactattatttttattcgtgaatatcacttcccataaatttagcctatggtagtcataataagaataagaat 367  Q
       | ||||||||||| | ||||||||||||||||||||||||| |||||| ||  | |||| |||||||||    
T  13060411 ---tcttatttttatttgagaatatcacttcccataaatttagcttatggtggttgtgataaaaataagaat 13060343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 114 - 367
Target Start/End: Original strand, 32081139 - 32081384
Alignment:
Q  114 gtgatcttggaagaaaaattggaagattaaacatca-actaattatactttgatataatattatctgaattgaaaaaatagagtatgg--gtcccacata 210  Q
    ||||| |||||| | ||||||||||||||||||| | | ||||||||||||||| |||| |    ||||||||||||||||||| |||  ||||||| ||    
T  32081139 gtgatgttggaaaataaattggaagattaaacataatagtaattatactttgatctaatgtg---tgaattgaaaaaatagagtgtggaggtcccacgta 32081235  T
Q  211 aaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattattactattatttttat 310  Q
    |||| |||| |||||||||| | ||||||||||| | ||||||||||||||||||||||||| |        ||||||||||      ||||||||||||    
T  32081236 aaatagaactcacacattagtagtgtttaaattgtgatatttaattttaaatacttgataatta--taaaaataatagtaat------tattatttttat 32081327  T
Q  311 tcgtgaatatcacttcccataaatttagcctatggtagtcataataagaataagaat 367  Q
    ||| ||||||||||||||||||||||||| |||||| ||  | ||||||||||||||    
T  32081328 tcgagaatatcacttcccataaatttagcttatggtggttgtgataagaataagaat 32081384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 132 - 274
Target Start/End: Complemental strand, 19107685 - 19107540
Alignment:
Q  132 ttggaagattaaacatcaactaattatactttgatataa-tattatctgaattgaaaaaatagagtatgg--gtcccacataaaatggaacacacacatt 228  Q
    ||||||||||||||| ||| | |||| |||||||| ||| |||| | ||||||||||| ||||||| |||  |||||||||||||| |||||||||||||    
T  19107685 ttggaagattaaacaccaagttattaaactttgatctaagtattgtgtgaattgaaaatatagagtgtggaggtcccacataaaatagaacacacacatt 19107586  T
Q  229 agcaatgtttaaattgaggtatttaattttaaatacttgataatga 274  Q
    || | ||||||||| | ||||||||||||||||||| |||||||||    
T  19107585 agtagtgtttaaatagtggtatttaattttaaatacctgataatga 19107540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 98 - 274
Target Start/End: Complemental strand, 23094247 - 23094071
Alignment:
Q  98 ctgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagta 197  Q
    ||||||||||||||||||||  || ||| |||||||| ||||||||||| |||  ||||| | |||||  |||| | || ||||||||||||||||||      
T  23094247 ctgttggaacattgatgtgaagttagaaaaaaaattgaaagattaaacaccaaggaattagaatttgagctaatgtgatatgaattgaaaaaatagagag 23094148  T
Q  198 tgggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 274  Q
    ||||  |||||||||||  |||||||||||||| | || |||||||  |  ||||||||||||||||||||||||||    
T  23094147 tggggtccacataaaataaaacacacacattagtagtgattaaattacgagatttaattttaaatacttgataatga 23094071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 132 - 274
Target Start/End: Complemental strand, 19103072 - 19102928
Alignment:
Q  132 ttggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtatgg--gtcccacataaaatggaacacacacatta 229  Q
    ||||||||||||||  ||| | |||| |||||||| || | || | ||||||||||||||||||| |||  |||||||||||||| ||||||||||||||    
T  19103072 ttggaagattaaactccaagttattaaactttgatctagtgttgtgtgaattgaaaaaatagagtgtggaggtcccacataaaatagaacacacacatta 19102973  T
Q  230 gcaatgtttaaattgaggtatttaattttaaatacttgataatga 274  Q
      | ||||||||| | | ||||||||||||||||| |||||||||    
T  19102972 atagtgtttaaatagtgatatttaattttaaatacctgataatga 19102928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 216 - 344
Target Start/End: Complemental strand, 19907268 - 19907148
Alignment:
Q  216 gaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattattactattatttttattcgtg 315  Q
    ||||||||||||||||| ||||||||||| |||||||||||||||||||||||| ||||        |||||| |||      |||||||||||||||||    
T  19907268 gaacacacacattagcagtgtttaaattgcggtatttaattttaaatacttgatgatga--taaaaataatagaaat------tattatttttattcgtg 19907177  T
Q  316 aatatcacttcccataaatttagcctatg 344  Q
    |||||||||||||||||||||||| ||||    
T  19907176 aatatcacttcccataaatttagcttatg 19907148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 99 - 274
Target Start/End: Original strand, 33462315 - 33462488
Alignment:
Q  99 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 198  Q
    ||||||||||||  ||| || || |||||||||||| |  |||||||| ||| |||||||| |||||| |||| || | ||||||||||||||||||| |    
T  33462315 tgttggaacattagtgtaatgttcgaagaaaaattgaataattaaacaccaaataattata-tttgatctaatgttgtgtgaattgaaaaaatagagtgt 33462413  T
Q  199 gg--gtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 274  Q
    ||  |||||| |||||||  || ||||||||||| | |||||||||||  || |||||||||||||||||||||||||    
T  33462414 ggaggtccca-ataaaat--aagacacacattagtagtgtttaaattgcagtgtttaattttaaatacttgataatga 33462488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 135 - 266
Target Start/End: Original strand, 8029328 - 8029457
Alignment:
Q  135 gaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat--gggtcccacataaaatggaacacacacattagca 232  Q
    |||||||||||| ||| |||||| |||||||| || |||| | ||||||||||||||||||| |  |||||||||||||||| |||||||||||    ||    
T  8029328 gaagattaaacaccaagtaattaaactttgatctagtattgtgtgaattgaaaaaatagagtgtgggggtcccacataaaatagaacacacaca----ca 8029423  T
Q  233 atgtttaaattgaggtatttaattttaaatactt 266  Q
     |||||| || | |||||||||||||||||||||    
T  8029424 gtgtttacatagtggtatttaattttaaatactt 8029457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 152 - 274
Target Start/End: Original strand, 32220574 - 32220698
Alignment:
Q  152 taattatactttgatataatattatctgaattgaaaaaatagagtatggg--tcccacataaaatggaacacacacattagcaatgtttaaattgaggta 249  Q
    |||||||| |||||| ||||||| | |||||| |||||||||||| ||||  ||||||||||||| ||||| ||||||||  | ||||||||||  | ||    
T  32220574 taattatattttgatctaatattgtgtgaattaaaaaaatagagtgtgggggtcccacataaaatagaacatacacattattagtgtttaaattccgata 32220673  T
Q  250 tttaattttaaatacttgataatga 274  Q
    |||||||||||||| ||||||||||    
T  32220674 tttaattttaaatatttgataatga 32220698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 136 - 372
Target Start/End: Complemental strand, 40409046 - 40408814
Alignment:
Q  136 aagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtatgggtcccacataaaatggaacacacacattagcaatg 235  Q
    |||||||||||  || | ||||||||||||| |||| || | |||||| ||||||||| ||  |||| ||| ||||||| ||||||||| ||||  | ||    
T  40409046 aagattaaacactaaatgattatactttgatctaatgttgtatgaattaaaaaaatagtgtg-gggtaccaaataaaatagaacacacatattattagtg 40408948  T
Q  236 tttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattattactattatttttattcgtgaatatcacttcccataaatt 335  Q
    ||||||||| |||||||||||||||||| ||||||    |       |||||||| |  | | ||||||||||||| ||||||||||||||||||| |||    
T  40408947 tttaaattgcggtatttaattttaaatatttgata---tggtaaaaataatagtagtagtaattattatttttattagtgaatatcacttcccatacatt 40408851  T
Q  336 tagcctatggtagtcataataagaataagaataagaa 372  Q
    |||| |||||| ||  | |||  ||||||||||||||    
T  40408850 tagcttatggtggtagtgatagaaataagaataagaa 40408814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 201 - 334
Target Start/End: Complemental strand, 6943819 - 6943684
Alignment:
Q  201 gtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatg--agnnnnnnntaatagtaattattac 298  Q
    |||||||||||||| ||||||| ||||||| |||||||||||||  ||||||||||| |||||||||||||||  |        |||||||| |  | |     
T  6943819 gtcccacataaaatagaacacatacattagtaatgtttaaattgctgtatttaatttcaaatacttgataatgataaaaaaaaataatagtagtagtaat 6943720  T
Q  299 tattatttttattcgtgaatatcacttcccataaat 334  Q
    ||||||||||||| ||||||||||||||||||||||    
T  6943719 tattatttttattggtgaatatcacttcccataaat 6943684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 137 - 274
Target Start/End: Complemental strand, 27183326 - 27183197
Alignment:
Q  137 agattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtatgggtcccacataaaatggaacacacacattagcaatgt 236  Q
    |||||||| | ||| |||||||||||||||||||| || | ||||||||||||      |  |||||||||||||||| |||||||||  |||| | |||    
T  27183326 agattaaataccaagtaattatactttgatataatgttgtgtgaattgaaaaa------tgggggtcccacataaaatagaacacaca--ttagtagtgt 27183235  T
Q  237 ttaaattgaggtatttaattttaaatacttgataatga 274  Q
    |||||||  |||||||||||||||||||||||||||||    
T  27183234 ttaaattatggtatttaattttaaatacttgataatga 27183197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 135 - 274
Target Start/End: Complemental strand, 12875507 - 12875366
Alignment:
Q  135 gaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat--gggtcccacataaaatggaacacacacattagca 232  Q
    |||||||||||| ||| |||||| ||||| || || | || | ||||||||||||||||||| |  ||||||  |||||||| |||| |||||||||| |    
T  12875507 gaagattaaacaccaagtaattagactttcatctagtgttgtgtgaattgaaaaaatagagtgtgggggtcctgcataaaatagaacccacacattagta 12875408  T
Q  233 atgtttaaattgaggtatttaattttaaatacttgataatga 274  Q
    || ||||||| | ||||||| |||||||||| ||||||||||    
T  12875407 atatttaaatagtggtatttgattttaaatatttgataatga 12875366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 416 - 474
Target Start/End: Complemental strand, 19102139 - 19102081
Alignment:
Q  416 tttgagggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgta 474  Q
    |||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||    
T  19102139 tttgagggtgtaattctcgaacggttttctacagtgcagtagttaaccgcacagttgta 19102081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 416 - 474
Target Start/End: Original strand, 37259810 - 37259868
Alignment:
Q  416 tttgagggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgta 474  Q
    |||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||    
T  37259810 tttgagggtgtaattctcgaacggttttctacagtgcagtagttaaccgcacagttgta 37259868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 98 - 166
Target Start/End: Complemental strand, 6943902 - 6943834
Alignment:
Q  98 ctgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgat 166  Q
    |||||| ||||||  |||||| ||||||||||||||||||||||||||||||| |||||||||||||||    
T  6943902 ctgttgcaacattagtgtgatgttggaagaaaaattggaagattaaacatcaagtaattatactttgat 6943834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 416 - 472
Target Start/End: Original strand, 31729320 - 31729376
Alignment:
Q  416 tttgagggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttg 472  Q
    |||||||||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  31729320 tttgagggtgtaattctcgaacggttttctacagtgcagtagttaaccgcacagttg 31729376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 416 - 474
Target Start/End: Complemental strand, 31273683 - 31273625
Alignment:
Q  416 tttgagggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgta 474  Q
    |||||||||||||||||||||| |||||||| |||||||||||||||| ||||||||||    
T  31273683 tttgagggtgtaattctcgaacggttttctacagtgcagtagttaaccacacagttgta 31273625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 416 - 474
Target Start/End: Original strand, 37264497 - 37264555
Alignment:
Q  416 tttgagggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgta 474  Q
    |||||||||||||||||||||| |||||||| ||||||||||||||||||||| |||||    
T  37264497 tttgagggtgtaattctcgaacggttttctacagtgcagtagttaaccgcacaattgta 37264555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 417 - 474
Target Start/End: Original strand, 8649564 - 8649621
Alignment:
Q  417 ttgagggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgta 474  Q
    |||| ||||||||||||||||||||||||| |||| ||||||||||||||||||||||    
T  8649564 ttgaaggtgtaattctcgaacagttttctacagtgtagtagttaaccgcacagttgta 8649621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 417 - 474
Target Start/End: Original strand, 8661371 - 8661428
Alignment:
Q  417 ttgagggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgta 474  Q
    |||| ||||||||||||||||||||||||| |||| ||||||||||||||||||||||    
T  8661371 ttgaaggtgtaattctcgaacagttttctacagtgtagtagttaaccgcacagttgta 8661428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 416 - 473
Target Start/End: Original strand, 42758688 - 42758745
Alignment:
Q  416 tttgagggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgt 473  Q
    |||||||||||||||||||||| |||||||| |||||||||||||| |||||||||||    
T  42758688 tttgagggtgtaattctcgaacggttttctacagtgcagtagttaatcgcacagttgt 42758745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 132 - 274
Target Start/End: Original strand, 48275829 - 48275970
Alignment:
Q  132 ttggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtatgggtc-ccacataaaatggaacacacacattag 230  Q
    ||||||||||||||||||| | |||| |||||||| |  | || | ||||||||||||||||||| ||||   ||| |||||||  |||||||||  |||    
T  48275829 ttggaagattaaacatcaagttattaaactttgatcttgtgttgtgtgaattgaaaaaatagagtgtgggggtccatataaaatataacacacac--tag 48275926  T
Q  231 caatgtttaaattgaggtatttaattttaaatacttgataatga 274  Q
    || ||||||||| | |||||||| |||||||||||| |||||||    
T  48275927 cagtgtttaaatagtggtatttatttttaaatacttaataatga 48275970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 416 - 483
Target Start/End: Complemental strand, 31269196 - 31269129
Alignment:
Q  416 tttgagggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgtaactgaactt 483  Q
    |||||||||||||||||||||| |||||||| |||||||||||||||| ||| |||||| ||| ||||    
T  31269196 tttgagggtgtaattctcgaacggttttctacagtgcagtagttaaccacacggttgtagctggactt 31269129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 416 - 466
Target Start/End: Complemental strand, 19106770 - 19106720
Alignment:
Q  416 tttgagggtgtaattctcgaacagttttctatagtgcagtagttaaccgca 466  Q
    |||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  19106770 tttgagggtgtaattctcgaacggttttctacagtgcagtagttaaccgca 19106720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 98 - 338
Target Start/End: Complemental strand, 31766999 - 31766779
Alignment:
Q  98 ctgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaa-tagagt 196  Q
    ||||||||||||||||||||| ||||| ||||||||| |||||||||             ||||||||| |||| || | ||||||||||||| |||| |    
T  31766999 ctgttggaacattgatgtgatgttggatgaaaaattgaaagattaaa-------------tactttgatctaatgtt-tgtgaattgaaaaaaatagatt 31766914  T
Q  197 atggg--tcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaa-ttttaaatacttgataatgagnnnnnnntaatagtaatt 293  Q
     ||||  ||||||||||||| ||||||||||||||  | || |||||||| ||||||||| ||||||||||||||||||||        |||||||||||    
T  31766913 gtgggggtcccacataaaatagaacacacacattaatagtg-ttaaattgtggtatttaatttttaaatacttgataatga--taaaaataatagtaatt 31766817  T
Q  294 attactattatttttattcgtgaatatcacttcccataaatttag 338  Q
    ||||       ||||||||| ||||||||||| ||||||||||||    
T  31766816 atta-------ttttattcgagaatatcactttccataaatttag 31766779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 416 - 474
Target Start/End: Complemental strand, 47244410 - 47244352
Alignment:
Q  416 tttgagggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgta 474  Q
    |||| |||| |||||||||||| |||||||| |||||||||||||||||||||||||||    
T  47244410 tttgggggtttaattctcgaacggttttctacagtgcagtagttaaccgcacagttgta 47244352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 422 - 483
Target Start/End: Complemental strand, 47574781 - 47574720
Alignment:
Q  422 ggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgtaactgaactt 483  Q
    ||||||||||||||||||||||||| |  |||||||||||||||||||||||| ||| ||||    
T  47574781 ggtgtaattctcgaacagttttctacatggcagtagttaaccgcacagttgtagctggactt 47574720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 416 - 474
Target Start/End: Complemental strand, 51698078 - 51698021
Alignment:
Q  416 tttgagggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgta 474  Q
    |||||||||||||||||||||| |||||||| |||||| |||||||||||||| |||||    
T  51698078 tttgagggtgtaattctcgaacggttttctacagtgca-tagttaaccgcacaattgta 51698021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 422 - 483
Target Start/End: Original strand, 48276588 - 48276649
Alignment:
Q  422 ggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgtaactgaactt 483  Q
    |||||||||||||||  |||||||| |||||||||||||| || ||||||||| ||||||||    
T  48276588 ggtgtaattctcgaatggttttctacagtgcagtagttaatcgaacagttgtagctgaactt 48276649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 422 - 474
Target Start/End: Complemental strand, 16421185 - 16421133
Alignment:
Q  422 ggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgta 474  Q
    ||||||| ||||| || |||||||| |||||||||||||||||||||||||||    
T  16421185 ggtgtaaatctcggacggttttctacagtgcagtagttaaccgcacagttgta 16421133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 422 - 474
Target Start/End: Complemental strand, 55251875 - 55251823
Alignment:
Q  422 ggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgta 474  Q
    ||||||| |||||||| |||||||| ||||||||||||||||| |||||||||    
T  55251875 ggtgtaaatctcgaacggttttctacagtgcagtagttaaccgtacagttgta 55251823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 136 - 263
Target Start/End: Complemental strand, 47245230 - 47245103
Alignment:
Q  136 aagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtatgggtcccacataaaatggaacacacacattagcaatg 235  Q
    |||||||||||  || | |||| | |||||| || |||| | |||||||||||||||| ||  || ||| | ||||||| ||||||||||||||  | ||    
T  47245230 aagattaaacactaagttattaaagtttgatctagtattgtgtgaattgaaaaaatagtgtggggatcctaaataaaatagaacacacacattattagtg 47245131  T
Q  236 tttaaattgaggtatttaattttaaata 263  Q
    ||||||| | | ||||||||||||||||    
T  47245130 tttaaatagcgatatttaattttaaata 47245103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 132 - 263
Target Start/End: Original strand, 8028148 - 8028271
Alignment:
Q  132 ttggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtatgggtcccacataaaatggaacacacacattagc 231  Q
    |||||||||||||||   | |||||| ||||||||  ||| || | ||||||||||||||||||| |  |     |||||||| |||||||||||||||     
T  8028148 ttggaagattaaaca---agtaattaaactttgatcgaatgttgtgtgaattgaaaaaatagagtgtaag-----cataaaatagaacacacacattagt 8028239  T
Q  232 aatgtttaaattgaggtatttaattttaaata 263  Q
    | ||||||||| |  |||||||||||||||||    
T  8028240 agtgtttaaatagttgtatttaattttaaata 8028271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 422 - 479
Target Start/End: Complemental strand, 8693867 - 8693810
Alignment:
Q  422 ggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgtaactga 479  Q
    ||||||||||||||||  ||||||| |||||||||||||| || ||||||||| ||||    
T  8693867 ggtgtaattctcgaacgattttctacagtgcagtagttaatcgaacagttgtagctga 8693810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 423 - 472
Target Start/End: Original strand, 13521929 - 13521978
Alignment:
Q  423 gtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttg 472  Q
    ||||||||||||||| |||||||| ||||||||||| ||||| |||||||    
T  13521929 gtgtaattctcgaacggttttctacagtgcagtagtcaaccgtacagttg 13521978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 422 - 479
Target Start/End: Original strand, 32082030 - 32082087
Alignment:
Q  422 ggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgtaactga 479  Q
    ||||||| |||||||  |||||||| | ||||||||||||||||||| ||||||||||    
T  32082030 ggtgtaaatctcgaatggttttctacactgcagtagttaaccgcacaattgtaactga 32082087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 417 - 474
Target Start/End: Original strand, 33463290 - 33463347
Alignment:
Q  417 ttgagggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgta 474  Q
    |||| |||||||||||||||| |||||||| | |||||||||||| || |||||||||    
T  33463290 ttgaaggtgtaattctcgaacggttttctacaatgcagtagttaatcgaacagttgta 33463347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 299 - 367
Target Start/End: Original strand, 39216249 - 39216317
Alignment:
Q  299 tattatttttattcgtgaatatcacttcccataaatttagcctatggtagtcataataagaataagaat 367  Q
    ||||||||||||||||| |||||||||| |||||||||| | |||| | ||  | ||||||||||||||    
T  39216249 tattatttttattcgtgtatatcacttcgcataaatttatcttatgttggttgtgataagaataagaat 39216317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 178 - 274
Target Start/End: Complemental strand, 12878961 - 12878864
Alignment:
Q  178 tgaattgaaaaaatagagtatggg--tcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 274  Q
    |||||||||||||||||||| | |  ||||||||||||| ||||| ||||||||  | |||||||||   | ||||| ||| |||||||||||||||||    
T  12878961 tgaattgaaaaaatagagtaagaggatcccacataaaatagaacatacacattaatagtgtttaaataatgatattt-attataaatacttgataatga 12878864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 416 - 479
Target Start/End: Complemental strand, 13059571 - 13059509
Alignment:
Q  416 tttgagggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgtaactga 479  Q
    ||||| |||||||| ||||||| |||||||| | |||||||||||||| |||||||||| ||||    
T  13059571 tttgaaggtgtaat-ctcgaacggttttctacaatgcagtagttaaccacacagttgtagctga 13059509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 422 - 483
Target Start/End: Complemental strand, 12878394 - 12878334
Alignment:
Q  422 ggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgtaactgaactt 483  Q
    |||||||||||||||| ||||||||  |||||||| |||||  |||||||||| ||||||||    
T  12878394 ggtgtaattctcgaacggttttcta-cgtgcagtaattaacaacacagttgtagctgaactt 12878334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 422 - 483
Target Start/End: Original strand, 19541100 - 19541161
Alignment:
Q  422 ggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgtaactgaactt 483  Q
    |||||||||||||||| |||||||| | |||||||||||| || || |||||| ||| ||||    
T  19541100 ggtgtaattctcgaacggttttctacaatgcagtagttaatcgaactgttgtagctggactt 19541161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 422 - 474
Target Start/End: Original strand, 8030415 - 8030467
Alignment:
Q  422 ggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgta 474  Q
    ||||||||| |||||| |||||||| |||||||||||||| || ||| |||||    
T  8030415 ggtgtaattttcgaacggttttctacagtgcagtagttaatcgaacatttgta 8030467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 422 - 466
Target Start/End: Original strand, 12823840 - 12823884
Alignment:
Q  422 ggtgtaattctcgaacagttttctatagtgcagtagttaaccgca 466  Q
    ||||||| |||||||| |||||||| ||||||||||||| |||||    
T  12823840 ggtgtaaatctcgaacggttttctacagtgcagtagttagccgca 12823884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 422 - 474
Target Start/End: Complemental strand, 40840483 - 40840432
Alignment:
Q  422 ggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgta 474  Q
    ||||||||||||||||  |||||| ||||||||| ||||| ||||||||||||    
T  40840483 ggtgtaattctcgaacgattttct-tagtgcagtggttaatcgcacagttgta 40840432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 109; Significance: 1e-54; HSPs: 4)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 102 - 367
Target Start/End: Complemental strand, 30313 - 30054
Alignment:
Q  102 tggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaataga--gtatg 199  Q
    ||||||||||||||||| ||||| ||||||||||||||||||||| ||| |||||||| |||||| |||| || | |||||||||||||||||  ||| |    
T  30313 tggaacattgatgtgatgttggatgaaaaattggaagattaaacaccaagtaattatattttgatctaatgttgtgtgaattgaaaaaatagagtgtagg 30214  T
Q  200 ggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattattact 299  Q
    | ||||||||||||| ||||||||||||||| | ||||||||||| ||||||||||||||| ||| |||||||||        ||||||||||      |    
T  30213 gatcccacataaaatagaacacacacattagtagtgtttaaattgcggtatttaattttaactacatgataatga--taaaaataatagtaat------t 30122  T
Q  300 attatttttattcgtgaatatcacttcccataaatttagcctatggtagtcataataagaataagaat 367  Q
    |||||||||||||| ||||||||||||||||||||||||  |||||| ||  | ||||||||||||||    
T  30121 attatttttattcgagaatatcacttcccataaatttagtttatggtggttgtgataagaataagaat 30054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #2
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 132 - 272
Target Start/End: Complemental strand, 26547 - 26405
Alignment:
Q  132 ttggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtatgg--gtcccacataaaatggaacacacacatta 229  Q
    ||||||||||||||| ||| |||||| ||||| || ||   || | |||||||||||||||||||  ||  |||||||||||||| ||||||||||||||    
T  26547 ttggaagattaaacaccaaataattaaactttcatctagagttgtgtgaattgaaaaaatagagtgcggaggtcccacataaaatagaacacacacatta 26448  T
Q  230 gcaatgtttaaattgaggtatttaattttaaatacttgataat 272  Q
    | | ||||||||| ||||||||||||||||||||| |||||||    
T  26447 gtagtgtttaaatagaggtatttaattttaaatacctgataat 26405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #3
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 417 - 471
Target Start/End: Complemental strand, 29316 - 29262
Alignment:
Q  417 ttgagggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagtt 471  Q
    |||| |||||||||||||||| |||||||| | ||||||||||||||||||||||    
T  29316 ttgaaggtgtaattctcgaacggttttctacaatgcagtagttaaccgcacagtt 29262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 424 - 474
Target Start/End: Complemental strand, 25553 - 25503
Alignment:
Q  424 tgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgta 474  Q
    ||||| |||||||| |||||||| |||| ||||||||||||||||||||||    
T  25553 tgtaagtctcgaacggttttctacagtgtagtagttaaccgcacagttgta 25503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 103; Significance: 5e-51; HSPs: 2)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 99 - 274
Target Start/End: Complemental strand, 8248 - 8071
Alignment:
Q  99 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 198  Q
    |||||||||||||||| ||| ||||| || |||||||||||||||||| ||| ||||||||||||||| |||| || | ||||||||||||||||||| |    
T  8248 tgttggaacattgatgcgatgttggatgataaattggaagattaaacaccaagtaattatactttgatttaatgttgtgtgaattgaaaaaatagagtgt 8149  T
Q  199 --gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 274  Q
      ||||||||||||| || ||||||||||||||| | ||||||||||| |||||||||||||||||||||||||||||    
T  8148 gggggtcccacataagatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgataatga 8071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 416 - 479
Target Start/End: Complemental strand, 7266 - 7203
Alignment:
Q  416 tttgagggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgtaactga 479  Q
    |||||||| ||||||||||||| |||||||| ||||||||||||||||||||||||||| ||||    
T  7266 tttgagggcgtaattctcgaacggttttctacagtgcagtagttaaccgcacagttgtagctga 7203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 103; Significance: 5e-51; HSPs: 51)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 99 - 274
Target Start/End: Original strand, 17963515 - 17963692
Alignment:
Q  99 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 198  Q
    |||| ||||||||||||||| ||||| ||||||||||||||||||||| ||| ||| ||||||||||| ||||  | | ||||||||||||||||||| |    
T  17963515 tgtttgaacattgatgtgatgttggatgaaaaattggaagattaaacaccaagtaactatactttgatctaatgatgtgtgaattgaaaaaatagagtgt 17963614  T
Q  199 ggg--tcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 274  Q
    |||  ||||||||||||| ||||||||||||||| | ||||||||||| |||||||||||||||||||||||||||||    
T  17963615 gggggtcccacataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgataatga 17963692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 98 - 367
Target Start/End: Original strand, 11533658 - 11533920
Alignment:
Q  98 ctgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagta 197  Q
    |||||||||||||  |||||| |||||  | ||||| |||||||||||| ||| |||||||| |||||| |||| || | ||||||||||||||| |||     
T  11533658 ctgttggaacattagtgtgatgttggagaataaattagaagattaaacaccaagtaattatagtttgatctaatgttgtgtgaattgaaaaaataaagtg 11533757  T
Q  198 tggg-tcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattatt 296  Q
    |||| ||||||||||||| ||||||||||||| | | ||||||||||| |||||||||||||||||||||||||||||        ||| | ||||| |     
T  11533758 tggggtcccacataaaatagaacacacacattggtagtgtttaaattgcggtatttaattttaaatacttgataatga--------taaaaataattgta 11533849  T
Q  297 actattatttttattcgtgaatatcacttcccataaatttagcctatggtagtcataataagaataagaat 367  Q
    | ||||||||||||||| ||||||||||| ||||||||||||| |||||| ||  | ||||||||||||||    
T  11533850 attattatttttattcgagaatatcactttccataaatttagcttatggtggttgtgataagaataagaat 11533920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 98 - 367
Target Start/End: Original strand, 11559168 - 11559430
Alignment:
Q  98 ctgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagta 197  Q
    |||||||||||||  |||||| |||||  | ||||| |||||||||||| ||| |||||||| |||||| |||| || | ||||||||||||||| |||     
T  11559168 ctgttggaacattagtgtgatgttggagaataaattagaagattaaacaccaagtaattatagtttgatctaatgttgtgtgaattgaaaaaatacagtg 11559267  T
Q  198 tggg-tcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattatt 296  Q
    |||| ||||||||||||| ||||||||||||| | | ||||||||||| |||||||||||||||||||||||||||||        ||| | ||||| |     
T  11559268 tggggtcccacataaaatagaacacacacattggtagtgtttaaattgcggtatttaattttaaatacttgataatga--------taaaaataattgta 11559359  T
Q  297 actattatttttattcgtgaatatcacttcccataaatttagcctatggtagtcataataagaataagaat 367  Q
    | ||||||||||||||| ||||||||||| ||||||||||||| |||||| ||  | ||||||||||||||    
T  11559360 attattatttttattcgagaatatcactttccataaatttagcttatggtggttgtgataagaataagaat 11559430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 120 - 367
Target Start/End: Original strand, 12405338 - 12405579
Alignment:
Q  120 ttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtatg--ggtcccacataaaatgga 217  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| |||| || | | |||| |||||||||||| ||  | || || ||||||| ||    
T  12405338 ttggaagaaaaattggaagattaaacatcaactaattatattttgatctaatgttgtgttaattaaaaaaatagagtgtggagatcacaaataaaataga 12405437  T
Q  218 acacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattattactattatttttattcgtgaa 317  Q
    ||||||||||||| | || ||||||||||||| ||||||||||||||||||||||||        ||||||||||      |||||||||||||||||||    
T  12405438 acacacacattagtagtgattaaattgaggtacttaattttaaatacttgataatga--taaaaataatagtaat------tattatttttattcgtgaa 12405529  T
Q  318 tatcacttcccataaatttagcctatggtagtcataataagaataagaat 367  Q
    |||||||||||||||||||||| ||||||  |  | ||||||||||||||    
T  12405530 tatcacttcccataaatttagcttatggtgattgtgataagaataagaat 12405579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 99 - 363
Target Start/End: Original strand, 16835118 - 16835377
Alignment:
Q  99 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaa-tagagta 197  Q
    |||||||||||||||||||| ||||| ||||||||| ||||||||||| ||| ||| ||||||||||| |||| || | |||||| |||||| ||||||     
T  16835118 tgttggaacattgatgtgatgttggatgaaaaattgaaagattaaacaccaagtaaatatactttgatctaatgttgtgtgaattaaaaaaaatagagtg 16835217  T
Q  198 tggg--tcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattat 295  Q
    ||||  ||||||||||||| ||||||||||||||| | ||||||||||| |||||||||||||||||||||||||||||        ||||||||||       
T  16835218 tgggggtcccacataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgataatga--taaaaataatagtaat--- 16835312  T
Q  296 tactattatttttattcgtgaatatcacttcccataaatttagcctatggtagtcataataagaataa 363  Q
       ||||||||||||| | ||||||||||| ||||||||||||  |||||| ||  | ||||||||||    
T  16835313 ---tattatttttatttgagaatatcactttccataaatttagtttatggtggttgtgataagaataa 16835377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 101 - 346
Target Start/End: Original strand, 20747256 - 20747495
Alignment:
Q  101 ttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat-- 198  Q
    ||||||||||| ||| |  || |||| ||||||||||||||||||||||| ||||||||||||||| |||| || | ||||||||||||||||||| |      
T  20747256 ttggaacattggtgttaagtttgaaggaaaattggaagattaaacatcaagtaattatactttgatttaatgttgtgtgaattgaaaaaatagagtgtgg 20747355  T
Q  199 gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattattac 298  Q
    |||||| ||||||||| ||||  ||||||||| | ||||||||||| |||||||||||||||||||||||||| ||         |||||||||          
T  20747356 gggtcctacataaaatagaacttacacattagtagtgtttaaattgcggtatttaattttaaatacttgataacga--taaaaacaatagtaat------ 20747447  T
Q  299 tattatttttattcgtgaatatcacttcccataaatttagcctatggt 346  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  20747448 tattatttttattcgtgaatatcacttcccataaatttagcatatggt 20747495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 99 - 367
Target Start/End: Original strand, 11569650 - 11569910
Alignment:
Q  99 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 198  Q
    ||||||||||||  |||||| ||| || | ||||| |||||||||||| ||| ||||||||||||||| |||| || | ||||||||||||||||||| |    
T  11569650 tgttggaacattagtgtgatgttgcaa-ataaattagaagattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgt 11569748  T
Q  199 ggg-tcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattatta 297  Q
    ||| ||||||||||||| ||||||||||||| | | ||||||||||| |||||||||||||||||||||||||||||        ||||||||||         
T  11569749 ggggtcccacataaaatagaacacacacattggaagtgtttaaattgcggtatttaattttaaatacttgataatga--taaaaataatagtaat----- 11569841  T
Q  298 ctattatttttattcgtgaatatcacttcccataaatttagcctatggtagtcataataagaataagaat 367  Q
     ||||||||||||||| ||||||||||  ||||||||||||| |||||| ||  | | ||||||||||||    
T  11569842 -tattatttttattcgagaatatcactgtccataaatttagcttatggtcgttgtgaaaagaataagaat 11569910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 101 - 372
Target Start/End: Original strand, 19994344 - 19994608
Alignment:
Q  101 ttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtatgg 200  Q
    ||||| ||||| |||||| |||||||||||||||||||||||||||  |  |||||||||||| ||  ||| |||| |||||| |||||||||||| |||    
T  19994344 ttggatcattggtgtgatgttggaagaaaaattggaagattaaacactaggtaattatactttaatcgaatgttatgtgaatt-aaaaaatagagtgtgg 19994442  T
Q  201 g--tcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattattac 298  Q
    |  |||||| |||||| ||||||||||||||| | ||||||||||| |||||||||||||||||||||||| ||||        ||||||||||          
T  19994443 gggtcccacgtaaaatagaacacacacattagtagtgtttaaattgcggtatttaattttaaatacttgattatga--taaaaataatagtaat------ 19994534  T
Q  299 tattatttttattcgtgaatatcacttcccataaatttagcctatggtagtcataataagaataagaataagaa 372  Q
    ||||||||||||||||||||||||||| ||| | ||||||| ||| || ||  | |||||||||||||||||||    
T  19994535 tattatttttattcgtgaatatcacttgccaaacatttagcttatagtggttgtgataagaataagaataagaa 19994608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 94 - 367
Target Start/End: Original strand, 2699066 - 2699334
Alignment:
Q  94 aaacctgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaa-ata 192  Q
    ||||||||||||||||   | |||| |||||| | |||||||||||||||||||||| |||||||||||| || |||| || | ||||| | |||| |||    
T  2699066 aaacctgttggaacatcagtatgatgttggaaaataaattggaagattaaacatcaagtaattatactttaatctaatgttgtgtgaatggtaaaatata 2699165  T
Q  193 gagtatggg--tcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagta 290  Q
    |||| ||||  ||||||||||||| |||  |||||||||| | ||||||||||| |||||||||||||||||||| |||||| |        ||||||||    
T  2699166 gagtgtgggggtcccacataaaatagaattcacacattagtagtgtttaaattgcggtatttaattttaaatactagataataa--taaaaataatagta 2699263  T
Q  291 attattactattatttttattcgtgaatatcacttcccataaatttagcctatggtagtcataataagaataagaat 367  Q
    ||      ||||||||||||||| ||||||||||||||||||||||||| |||  ||||  ||||||||||||||||    
T  2699264 at------tattatttttattcgagaatatcacttcccataaatttagcttataatagttgtaataagaataagaat 2699334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 120 - 363
Target Start/End: Original strand, 6406838 - 6407074
Alignment:
Q  120 ttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtatggg--tcccacataaaatgga 217  Q
    ||||| ||||||||| ||||||||||| ||| ||||||||||||||| || | || | ||||||||||||||||||| ||||  |||  |||||||| ||    
T  6406838 ttggatgaaaaattgaaagattaaacaccaagtaattatactttgatctattgttgtgtgaattgaaaaaatagagtgtgggggtcctgcataaaataga 6406937  T
Q  218 acacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattattactattatttttattcgtgaa 317  Q
    ||||||||||||| | ||||||||||| |||||||||||||||||||||||||||||        |||||||||||||||       ||||||||| |||    
T  6406938 acacacacattagtagtgtttaaattgtggtatttaattttaaatacttgataatga--taaaaataatagtaattatta-------ttttattcgagaa 6407028  T
Q  318 tatcacttcccataaatttagcctatggtagtcataataagaataa 363  Q
    ||||| || ||||||||||||| |||||| ||  | ||||||||||    
T  6407029 tatcattttccataaatttagcttatggtggttgtgataagaataa 6407074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 120 - 274
Target Start/End: Complemental strand, 17600495 - 17600342
Alignment:
Q  120 ttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat--gggtcccacataaaatgga 217  Q
    ||||||||||||||||||||||||||| ||| |||| |||||||||| |||| || | ||||||||||||||||||| |  |||||||||||||||| ||    
T  17600495 ttggaagaaaaattggaagattaaacaccaagtaatcatactttgatctaatgttgtgtgaattgaaaaaatagagtgtgagggtcccacataaaataga 17600396  T
Q  218 acacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 274  Q
    ||||| |||||||   ||||||||||| |||||||||||||||||| ||||||||||    
T  17600395 acacaaacattag---tgtttaaattgtggtatttaattttaaataattgataatga 17600342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 156 - 367
Target Start/End: Original strand, 25313487 - 25313694
Alignment:
Q  156 tatactttgatataatattatctgaattgaaaaaatagagtatg--ggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtattta 253  Q
    |||||||||||||||| || | ||||||||||||||||||| ||  |||| |||||||||| ||||||| | ||||| | ||||||||||| ||||||||    
T  25313487 tatactttgatataatgttttatgaattgaaaaaatagagtgtgcgggtcacacataaaatagaacacatatattagtagtgtttaaattgcggtattta 25313586  T
Q  254 attttaaatacttgataatgagnnnnnnntaatagtaattattactattatttttattcgtgaatatcacttcccataaatttagcctatggtagtcata 353  Q
    |||||||||||||||||||||        ||||||||||      ||||||||||||||| ||||||||||||| ||||||||||| |||| ||||  |     
T  25313587 attttaaatacttgataatgataaaaaaataatagtaat------tattatttttattcgagaatatcacttcctataaatttagcttatgatagttgtg 25313680  T
Q  354 ataagaataagaat 367  Q
    ||||||||||||||    
T  25313681 ataagaataagaat 25313694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 156 - 367
Target Start/End: Original strand, 26200981 - 26201188
Alignment:
Q  156 tatactttgatataatattatctgaattgaaaaaatagagtatg--ggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtattta 253  Q
    |||||||||||||||| || | ||||||||||||||||||| ||  |||| |||||||||| ||||||| | ||||| | ||||||||||| ||||||||    
T  26200981 tatactttgatataatgttttatgaattgaaaaaatagagtgtgcgggtcacacataaaatagaacacatatattagtagtgtttaaattgcggtattta 26201080  T
Q  254 attttaaatacttgataatgagnnnnnnntaatagtaattattactattatttttattcgtgaatatcacttcccataaatttagcctatggtagtcata 353  Q
    |||||||||||||||||||||        ||||||||||      ||||||||||||||| ||||||||||||| ||||||||||| |||| ||||  |     
T  26201081 attttaaatacttgataatgataaaaaaataatagtaat------tattatttttattcgagaatatcacttcctataaatttagcttatgatagttgtg 26201174  T
Q  354 ataagaataagaat 367  Q
    ||||||||||||||    
T  26201175 ataagaataagaat 26201188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 104 - 274
Target Start/End: Original strand, 22694347 - 22694517
Alignment:
Q  104 gaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtatgggtc 203  Q
    |||||||| |||||| ||||||||||||||||||||||||||| ||| ||||||||||||||| |||| || | ||||||||||||||||  |   ||||    
T  22694347 gaacattggtgtgatgttggaagaaaaattggaagattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagtttggaggtc 22694446  T
Q  204 ccacataaaatggaacacacacat-tagcaatgtttaaattgaggtatttaattttaaatacttgataatga 274  Q
    ||||||||||| |||||||||||| ||| | |||||||||||  |||||||||| |||| ||||||||||||    
T  22694447 ccacataaaatagaacacacacatctag-agtgtttaaattgccgtatttaattataaaaacttgataatga 22694517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 104 - 274
Target Start/End: Original strand, 33686606 - 33686777
Alignment:
Q  104 gaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat-gggt 202  Q
    ||||||| ||||||| |||||| | |||||||||||||||||||||| ||||||||||||||| |||| || | ||||||||||||||||||| | ||||    
T  33686606 gaacattaatgtgatgttggaaaataaattggaagattaaacatcaaataattatactttgatctaattttgtgtgaattgaaaaaatagagtgtggggt 33686705  T
Q  203 cccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 274  Q
     |||||||||||  |||  ||| ||||| | |||||||| || |||||||| ||||||||||||| ||||||    
T  33686706 tccacataaaataaaacttacaaattagtagtgtttaaactgtggtatttagttttaaatacttggtaatga 33686777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 99 - 367
Target Start/End: Original strand, 11612861 - 11613122
Alignment:
Q  99 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatacttt--gatataatattatctgaattgaaaaaatagagt 196  Q
    |||||||||||||  ||||| ||||||| ||||||| || ||||||||| || ||||||||||||  ||| |||| |||| | |||||||||||||||||    
T  11612861 tgttggaacattg--gtgatgttggaaggaaaattgaaaaattaaacat-aagtaattatactttttgatctaatgttatataaattgaaaaaatagagt 11612957  T
Q  197 atgg--gtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaatta 294  Q
     | |  ||||||||||||||  |||||||||||||| | ||||||||||  |||||||||||||||||||||||||||||        ||||||| ||||    
T  11612958 gttgaggtcccacataaaataaaacacacacattagtagtgtttaaatttcggtatttaattttaaatacttgataatga--taaaaataatagtgatta 11613055  T
Q  295 ttactattatttttattcgtgaatatcacttcccataaatttagcctatggtagtcataataagaataagaat 367  Q
         |||| |||||||||||||||||| || ||||||||||||| |||||| ||  | ||||||||||||||    
T  11613056 -----attaattttattcgtgaatatcattttccataaatttagcttatggt-gttgtgataagaataagaat 11613122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 132 - 263
Target Start/End: Complemental strand, 12690074 - 12689942
Alignment:
Q  132 ttggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtatgg-gtcccacataaaatggaacacacacattag 230  Q
    |||||| |||||||| ||| | |||| |||||||| || | || | ||||||||||||||||||| ||| |||||||||||||| |||||||||||||||    
T  12690074 ttggaaaattaaacaccaaattattaaactttgatctagtgttgtgtgaattgaaaaaatagagtgtggagtcccacataaaatagaacacacacattag 12689975  T
Q  231 caatgtttaaattgaggtatttaattttaaata 263  Q
     | ||||||||| | ||||||||||||||||||    
T  12689974 tagtgtttaaatagcggtatttaattttaaata 12689942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 199 - 367
Target Start/End: Complemental strand, 5857022 - 5856862
Alignment:
Q  199 gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattattac 298  Q
    |||||||||||||| | ||||| ||||||||| | ||||||||||| |||||||||||||||||| ||||||||||        ||||||||||          
T  5857022 gggtcccacataaactagaacatacacattagtagtgtttaaattgcggtatttaattttaaataattgataatga--taaaaataatagtaat------ 5856931  T
Q  299 tattatttttattcgtgaatatcacttcccataaatttagcctatggtagtcataataagaataagaat 367  Q
    | ||||||||||||| ||||||||||||||| ||||||||| |||||| ||  | ||||||||||||||    
T  5856930 tgttatttttattcgagaatatcacttcccaaaaatttagcttatggtggttgtgataagaataagaat 5856862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 101 - 261
Target Start/End: Complemental strand, 11429094 - 11428933
Alignment:
Q  101 ttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat-- 198  Q
    |||||||||||||||  | ||||| ||||||||||||||||||||| ||  ||||||||||||||| |||| ||   ||||||||||||||||||| |      
T  11429094 ttggaacattgatgtacttttggatgaaaaattggaagattaaacaccagataattatactttgatctaatgttgcgtgaattgaaaaaatagagtgtgg 11428995  T
Q  199 gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaa 261  Q
    ||||||||||| |||| || |||||||||| | | | |||||| || ||| ||||||||||||    
T  11428994 gggtcccacattaaatagagcacacacatttgtagtatttaaactgcggt-tttaattttaaa 11428933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 132 - 268
Target Start/End: Original strand, 12797772 - 12797914
Alignment:
Q  132 ttggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaataga--gtatgggtcccacataaaatgga----acacacac 225  Q
    ||||||||||||||| ||| |||||| |||||||| || | || | |||||||||||||||||  || ||||||||||||||||| ||    ||||||||    
T  12797772 ttggaagattaaacaccaagtaattagactttgatctagtgttgtgtgaattgaaaaaatagagtgtgtgggtcccacataaaatagaaaacacacacac 12797871  T
Q  226 attagcaatgtttaaattgaggtatttaattttaaatacttga 268  Q
    | ||| | ||||||||| | |||||||||||||||||||||||    
T  12797872 actagtagtgtttaaatagtggtatttaattttaaatacttga 12797914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 181 - 274
Target Start/End: Complemental strand, 22610568 - 22610473
Alignment:
Q  181 attgaaaaaatagagtatgg--gtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 274  Q
    |||||||||||||| | |||  || |||||||||||  |||||||||||||| | ||||||||||  |||||||||||||||||||||||||||||    
T  22610568 attgaaaaaatagattgtggcagttccacataaaataaaacacacacattagtagtgtttaaattttggtatttaattttaaatacttgataatga 22610473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 200 - 367
Target Start/End: Complemental strand, 17914628 - 17914469
Alignment:
Q  200 ggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattattact 299  Q
    ||||| ||||||||||||||||||||||||  | ||||| ||||  ||||||||||||||||||| |||| ||||        |||||| ||||||||      
T  17914628 ggtcctacataaaatggaacacacacattaatagtgttttaattacggtatttaattttaaatacctgatgatga--taaaaataatagcaattatta-- 17914533  T
Q  300 attatttttattcgtgaatatcacttcccataaatttagcctatggtagtcataataagaataagaat 367  Q
        |||||||| ||||||||||||||||||||||||||  |||||| ||  | ||||||||||||||    
T  17914532 ----tttttatttgtgaatatcacttcccataaatttaggttatggtggttgtgataagaataagaat 17914469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 299 - 367
Target Start/End: Original strand, 4156486 - 4156554
Alignment:
Q  299 tattatttttattcgtgaatatcacttcccataaatttagcctatggtagtcataataagaataagaat 367  Q
    ||||||||||||||| ||||||||||||| ||||||||||| |||||| ||  ||||||||||||||||    
T  4156486 tattatttttattcgagaatatcacttccgataaatttagcttatggtggttgtaataagaataagaat 4156554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 416 - 472
Target Start/End: Original strand, 17964492 - 17964548
Alignment:
Q  416 tttgagggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttg 472  Q
    ||||| |||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  17964492 tttgaaggtgtaattctcgaacggttttctacagtgcagtagttaaccgcacagttg 17964548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 136 - 274
Target Start/End: Complemental strand, 19674874 - 19674735
Alignment:
Q  136 aagattaaacatcaactaattatactttgatataatattatctgaattg-aaaaaatagagtatgggtcccacataaaatggaacacacacattagcaat 234  Q
    ||||||||||| ||| |||||| |||||||| || | || | ||||||| ||||||||| ||  |||||| ||||||||| |||||||||||| || | |    
T  19674874 aagattaaacaccaaataattaaactttgatctagtgttgtgtgaattggaaaaaatagtgtgggggtccgacataaaatagaacacacacatcagtagt 19674775  T
Q  235 gtttaaattgaggtatttaattttaaatacttgataatga 274  Q
    ||||||||   | ||||||||||||||||| | |||||||    
T  19674774 gtttaaataatgatatttaattttaaatacctaataatga 19674735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 417 - 479
Target Start/End: Complemental strand, 12689132 - 12689070
Alignment:
Q  417 ttgagggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgtaactga 479  Q
    |||||||||||||| |||||| |||||||| |||| |||||||||||||||||||||| ||||    
T  12689132 ttgagggtgtaattgtcgaacggttttctacagtgtagtagttaaccgcacagttgtagctga 12689070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 299 - 344
Target Start/End: Complemental strand, 11428911 - 11428866
Alignment:
Q  299 tattatttttattcgtgaatatcacttcccataaatttagcctatg 344  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||    
T  11428911 tattatttttattcgtgaatatcacttcccataaatttagcttatg 11428866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 417 - 474
Target Start/End: Original strand, 24589098 - 24589155
Alignment:
Q  417 ttgagggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgta 474  Q
    |||| |||||||||||||||| |||||||| | |||||||||||||||||||||||||    
T  24589098 ttgaaggtgtaattctcgaacggttttctacaatgcagtagttaaccgcacagttgta 24589155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 101 - 165
Target Start/End: Complemental strand, 5857096 - 5857033
Alignment:
Q  101 ttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttga 165  Q
    ||||||||||  |||||| ||||||||||||||||||||||||||| ||| ||||||||||||||    
T  5857096 ttggaacattagtgtgatgttggaagaaaaattggaagattaaacaccaa-taattatactttga 5857033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 418 - 474
Target Start/End: Original strand, 16836091 - 16836147
Alignment:
Q  418 tgagggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgta 474  Q
    |||||||||||||||||||| |||||||| |||||||||  ||||||||||||||||    
T  16836091 tgagggtgtaattctcgaacggttttctacagtgcagtaactaaccgcacagttgta 16836147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 422 - 474
Target Start/End: Original strand, 20748223 - 20748275
Alignment:
Q  422 ggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgta 474  Q
    |||||||||||||||| ||||||||  ||||||||||||||||||||||||||    
T  20748223 ggtgtaattctcgaaccgttttctacggtgcagtagttaaccgcacagttgta 20748275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 416 - 483
Target Start/End: Original strand, 25316497 - 25316563
Alignment:
Q  416 tttgagggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgtaactgaactt 483  Q
    |||||||||| |||||||||||||||||||| |||||| ||||||||||||| ||||||  |||||||    
T  25316497 tttgagggtgcaattctcgaacagttttctacagtgca-tagttaaccgcacggttgtagatgaactt 25316563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 416 - 483
Target Start/End: Original strand, 26203991 - 26204057
Alignment:
Q  416 tttgagggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgtaactgaactt 483  Q
    |||||||||| |||||||||||||||||||| |||||| ||||||||||||| ||||||  |||||||    
T  26203991 tttgagggtgcaattctcgaacagttttctacagtgca-tagttaaccgcacggttgtagatgaactt 26204057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 416 - 474
Target Start/End: Original strand, 11534644 - 11534702
Alignment:
Q  416 tttgagggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgta 474  Q
    ||||||||||||||||| |||| |||||||| | |||||||||| ||||||||||||||    
T  11534644 tttgagggtgtaattctggaacggttttctacaatgcagtagttcaccgcacagttgta 11534702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 416 - 474
Target Start/End: Original strand, 11560154 - 11560212
Alignment:
Q  416 tttgagggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgta 474  Q
    ||||||||||||||||| |||| |||||||| | |||||||||| ||||||||||||||    
T  11560154 tttgagggtgtaattctggaacggttttctacaatgcagtagttcaccgcacagttgta 11560212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 303 - 372
Target Start/End: Original strand, 22694518 - 22694587
Alignment:
Q  303 atttttattcgtgaatatcacttcccataaatttagcctatggtagtcataataagaataagaataagaa 372  Q
    ||||||||||||||||||||||| ||||| ||||||| |||| | ||  | |||||||||||||||||||    
T  22694518 atttttattcgtgaatatcacttaccatatatttagcttatgatggttgtgataagaataagaataagaa 22694587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 416 - 474
Target Start/End: Original strand, 33687536 - 33687594
Alignment:
Q  416 tttgagggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgta 474  Q
    ||||||||||||| |||||||   ||||||| | |||||||||||||||||||||||||    
T  33687536 tttgagggtgtaaatctcgaaggattttctacaatgcagtagttaaccgcacagttgta 33687594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 422 - 479
Target Start/End: Original strand, 6407800 - 6407856
Alignment:
Q  422 ggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgtaactga 479  Q
    ||||||||||| |||| |||||||| |||| |||||||||||||||||||||| ||||    
T  6407800 ggtgtaattcttgaacggttttctacagtg-agtagttaaccgcacagttgtagctga 6407856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 422 - 474
Target Start/End: Original strand, 13736617 - 13736669
Alignment:
Q  422 ggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgta 474  Q
    ||||||| ||||||||||||||||| |||||||||||||  |||||| |||||    
T  13736617 ggtgtaaatctcgaacagttttctacagtgcagtagttattcgcacatttgta 13736669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 420 - 479
Target Start/End: Original strand, 4157306 - 4157365
Alignment:
Q  420 agggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgtaactga 479  Q
    ||||||||| | ||||||  ||||||| |||||||||||||||||||| |||||| ||||    
T  4157306 agggtgtaaatttcgaacgattttctacagtgcagtagttaaccgcaccgttgtagctga 4157365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 417 - 472
Target Start/End: Complemental strand, 8747943 - 8747888
Alignment:
Q  417 ttgagggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttg 472  Q
    |||| ||||||||| |||||| |||||||| |||||||||||||||| || |||||    
T  8747943 ttgaaggtgtaattttcgaacggttttctacagtgcagtagttaaccacatagttg 8747888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 416 - 479
Target Start/End: Original strand, 11570682 - 11570745
Alignment:
Q  416 tttgagggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgtaactga 479  Q
    ||||||||| ||||||| |||| |||||||| || | ||||||| |||||||||||||| ||||    
T  11570682 tttgagggtataattctggaacggttttctacagcggagtagttcaccgcacagttgtagctga 11570745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 234 - 272
Target Start/End: Complemental strand, 14509979 - 14509941
Alignment:
Q  234 tgtttaaattgaggtatttaattttaaatacttgataat 272  Q
    ||||||||||| ||||||||||||||||||||| |||||    
T  14509979 tgtttaaattgtggtatttaattttaaatacttaataat 14509941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 416 - 474
Target Start/End: Original strand, 19995336 - 19995394
Alignment:
Q  416 tttgagggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgta 474  Q
    ||||||||||||| |||||||  ||||||||  ||| |||||||||||||| |||||||    
T  19995336 tttgagggtgtaaatctcgaaaggttttctacggtgtagtagttaaccgcatagttgta 19995394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 98 - 171
Target Start/End: Original strand, 29891917 - 29891991
Alignment:
Q  98 ctgttggaacattgatgtgatcttggaagaaaa-attggaagattaaacatcaactaattatactttgatataat 171  Q
    ||||| |||||||| |||||| ||| ||||||| ||||||||||||||||  || ||||| ||||||||| ||||    
T  29891917 ctgttagaacattggtgtgatgttgaaagaaaaaattggaagattaaacacaaagtaattgtactttgatctaat 29891991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 430 - 475
Target Start/End: Original strand, 11614039 - 11614084
Alignment:
Q  430 tctcgaacagttttctatagtgcagtagttaaccgcacagttgtaa 475  Q
    |||| |||||||||||| |||||| |||||||||||||| ||||||    
T  11614039 tctcaaacagttttctaaagtgcattagttaaccgcacaattgtaa 11614084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 422 - 474
Target Start/End: Original strand, 9751747 - 9751799
Alignment:
Q  422 ggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgta 474  Q
    |||||||||||||||  || ||||| |||||||||||||| |||||| |||||    
T  9751747 ggtgtaattctcgaatggtgttctacagtgcagtagttaatcgcacaattgta 9751799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 422 - 474
Target Start/End: Complemental strand, 14509140 - 14509088
Alignment:
Q  422 ggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgta 474  Q
    ||||||||||||||||  ||||||| | |||||||||||| || |||||||||    
T  14509140 ggtgtaattctcgaacgattttctacaatgcagtagttaatcgaacagttgta 14509088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 423 - 483
Target Start/End: Original strand, 15991680 - 15991740
Alignment:
Q  423 gtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgtaactgaactt 483  Q
    ||||||||||| ||| |||||| | ||||||||||||||| ||||| ||| | ||||||||    
T  15991680 gtgtaattctcaaacggttttcgacagtgcagtagttaactgcacaattgcagctgaactt 15991740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 423 - 483
Target Start/End: Original strand, 15999342 - 15999402
Alignment:
Q  423 gtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgtaactgaactt 483  Q
    ||||||||||| ||| |||||| | ||||||||||||||| ||||| ||| | ||||||||    
T  15999342 gtgtaattctcaaacggttttcgacagtgcagtagttaactgcacaattgcagctgaactt 15999402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 314 - 346
Target Start/End: Complemental strand, 17600308 - 17600276
Alignment:
Q  314 tgaatatcacttcccataaatttagcctatggt 346  Q
    |||||||||||||||||||||||||| ||||||    
T  17600308 tgaatatcacttcccataaatttagcttatggt 17600276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 102; Significance: 2e-50; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 98 - 363
Target Start/End: Original strand, 40124850 - 40125108
Alignment:
Q  98 ctgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagta 197  Q
    ||||||||||||||||||||| ||||| ||||||||| ||||||||||| ||| ||| ||||||||||| |||| || | |||||||||||||||||||     
T  40124850 ctgttggaacattgatgtgatgttggatgaaaaattgaaagattaaacaccaagtaaatatactttgatctaatgttgtgtgaattgaaaaaatagagtg 40124949  T
Q  198 t--gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattat 295  Q
    |  ||||||| |||||||| ||||||||||||||| | ||||||||||| ||||||||||||||||||||||||| |||        |||||||||||||    
T  40124950 tgggggtcccgcataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgatagtga--taaaaataatagtaattat 40125047  T
Q  296 tactattatttttattcgtgaatatcacttcccataaatttagcctatggtagtcataataagaataa 363  Q
    ||       ||||||| | ||||||||||| ||||||||||||| |||||| ||  | ||||||||||    
T  40125048 ta-------ttttatttgagaatatcactttccataaatttagcttatggttgttgtgataagaataa 40125108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 102 - 367
Target Start/End: Original strand, 15950528 - 15950794
Alignment:
Q  102 tggaacattgatgtgatcttggaagaaaaattggaagattaaacatc----aactaattatactttgatataatattatctgaattgaaaaaatagagta 197  Q
    ||||||||||||||||| ||||| |||||||||||||| |||||| |    || ||||||||||||||| |||| || | |||||||||||||||||||     
T  15950528 tggaacattgatgtgatgttggatgaaaaattggaagactaaacaccaagtaattaattatactttgatctaatgttgtgtgaattgaaaaaatagagtg 15950627  T
Q  198 tg--ggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga-gnnnnnnntaatagtaatta 294  Q
    ||  ||| ||||||||||| ||||||||||||||  | ||||||||||| ||||||||||||||||||||||||||||| |       ||||||||||      
T  15950628 tggaggtgccacataaaatagaacacacacattaatagtgtttaaattgcggtatttaattttaaatacttgataatgatgataaaaataatagtaat-- 15950725  T
Q  295 ttactattatttttattcgtgaatatcacttcccataaatttagcctatggtagtcataataagaataagaat 367  Q
        ||||||||||||||| ||||||||||||||||| ||||||| ||| |||||  | ||||||||||||||    
T  15950726 ----tattatttttattcgagaatatcacttcccatatatttagcttatagtagttgtgataagaataagaat 15950794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 120 - 367
Target Start/End: Original strand, 38181260 - 38181501
Alignment:
Q  120 ttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtatggg--tcccacataaaatgga 217  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||| |||| || | ||||||||||||||| ||| || |  ||||||||||||| ||    
T  38181260 ttggaagaaaaattggaacattaaacatcaagtaattatactttgatctaatgttgtgtgaattgaaaaaataaagtgtgagagtcccacataaaataga 38181359  T
Q  218 acacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattattactattatttttattcgtgaa 317  Q
    ||||||||||||| | ||||||||||| |||||||||||||||||||||||||||||        ||||||||||      ||||||||||||||| |||    
T  38181360 acacacacattagtagtgtttaaattgcggtatttaattttaaatacttgataatga--taaaaataatagtaat------tattatttttattcgagaa 38181451  T
Q  318 tatcacttcccataaatttagcctatggtagtcataataagaataagaat 367  Q
    || ||||||||||||||||| | || ||| ||  | ||||||||||||||    
T  38181452 taccacttcccataaatttaacttagggtggttgtgataagaataagaat 38181501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 113 - 367
Target Start/End: Complemental strand, 2966710 - 2966462
Alignment:
Q  113 tgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtatg--ggtcccacata 210  Q
    |||||| ||||||||||||||||||||||||||||||| |||||||| ||| || |||| ||||  |||||||||||||||||| ||  ||||||| |||    
T  2966710 tgtgatgttggaagaaaaattggaagattaaacatcaaataattatatttttatctaatgttatgggaattgaaaaaatagagtgtgagggtcccatata 2966611  T
Q  211 aaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattattactattatttttat 310  Q
    |||| ||||||||||||||| | ||||||||||| ||||||||||||||||||||| |||||||        | ||||||||      ||||||||||||    
T  2966610 aaatagaacacacacattagtagtgtttaaattgcggtatttaattttaaatacttaataatga--taaaaattatagtaat------tattatttttat 2966519  T
Q  311 tcgtgaatatcacttcccataaatttagcctatggtagtcataataagaataagaat 367  Q
    ||||||||||||||||| ||||||||| | ||  || ||  ||||||||||||||||    
T  2966518 tcgtgaatatcacttcctataaatttaccttacagtggttctaataagaataagaat 2966462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 99 - 274
Target Start/End: Complemental strand, 1808589 - 1808413
Alignment:
Q  99 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 198  Q
    ||||||||||||  |||||| |||||| | |||||||||||||||||| ||| ||||||||||||||| |||| || | ||||||||||||||| ||| |    
T  1808589 tgttggaacattagtgtgatgttggaaaataaattggaagattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatatagtgt 1808490  T
Q  199 ggg-tcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 274  Q
    ||| ||||| ||||||| ||||||||||||||| | ||||||||||| |||||||||||||||||| ||||||||||    
T  1808489 ggggtcccatataaaatagaacacacacattagaagtgtttaaattgcggtatttaattttaaatatttgataatga 1808413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 98 - 367
Target Start/End: Original strand, 44924877 - 44925140
Alignment:
Q  98 ctgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagta 197  Q
    |||||||||||||  |||||| |||||| | ||||||||||||||||||  ||  |||||||||||||| |||| || | |||||||||||| ||||||     
T  44924877 ctgttggaacattagtgtgatgttggaaaataaattggaagattaaacactaatcaattatactttgatctaatcttgtgtgaattgaaaaattagagtt 44924976  T
Q  198 tgg--gtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattat 295  Q
    |||  |||||||||||||| ||| ||||||||||| | ||||||||||| |||||||||||||||||||||||||||||        ||| ||||||       
T  44924977 tggaggtcccacataaaatagaaaacacacattagtagtgtttaaattgcggtatttaattttaaatacttgataatga--taaaaataacagtaat--- 44925071  T
Q  296 tactattatttttattcgtgaatatcacttcccataaatttagcctatggtagtcataataagaataagaat 367  Q
       ||||||||||||||| |||||||| |||||||||||||| | |||||| ||  | ||||||||||||||    
T  44925072 ---tattatttttattcgagaatatcatttcccataaatttatcttatggtggttgtgataagaataagaat 44925140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 99 - 274
Target Start/End: Original strand, 1909904 - 1910081
Alignment:
Q  99 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 198  Q
    ||||||||||||  | |||| |||||| | |||||||||||||||||| ||| ||||||||||||||| |||| || | ||||||||||||||||||| |    
T  1909904 tgttggaacattagtatgatgttggaaaataaattggaagattaaacaccaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgt 1910003  T
Q  199 gg--gtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 274  Q
    ||  ||||||||| |||| || | |||||||||| | ||||||||  | |||||||||||||||||||||||||||||    
T  1910004 ggatgtcccacatgaaatagagctcacacattagtagtgtttaaacagtggtatttaattttaaatacttgataatga 1910081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 99 - 274
Target Start/End: Original strand, 28559074 - 28559250
Alignment:
Q  99 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 198  Q
    |||||||| |||||||| || || |||||||||||||||||||||||| ||| || ||||||||| || |||| || | |  || ||||||||||||| |    
T  28559074 tgttggaaaattgatgtaatgttcgaagaaaaattggaagattaaacaccaaata-ttatactttaatctaatgttgtgtacatggaaaaaatagagtgt 28559172  T
Q  199 gg--gtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 274  Q
    ||  |||||||||||||| ||||||||||||||| | ||||||||||| |||||||||||||||||| ||||||||||    
T  28559173 ggaggtcccacataaaatagaacacacacattagtagtgtttaaattgcggtatttaattttaaatatttgataatga 28559250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 107 - 367
Target Start/End: Complemental strand, 26780234 - 26779981
Alignment:
Q  107 cattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtatgggt--cc 204  Q
    ||||||||| || ||||||||||||||  |||||||||||  || |||||||||| | || |||| || | |||||||||||  |||||| |||||  ||    
T  26780234 cattgatgtaatgttggaagaaaaattaaaagattaaacactaagtaattatactctaatttaatgttgtgtgaattgaaaac-tagagtgtgggtgtcc 26780136  T
Q  205 cacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattattactattat 304  Q
    |||||||||| ||||||||||||||| | ||||||||||| |||||||||||||||||||||||||||||         |||||||||      ||||||    
T  26780135 cacataaaatagaacacacacattagtagtgtttaaattgcggtatttaattttaaatacttgataatga--taaaaacaatagtaat------tattat 26780044  T
Q  305 ttttattcgtgaatatcacttcccataaatttagcctatggtagtcataataagaataagaat 367  Q
    ||||||||||||||||| |||| |||||||||| | |||| | ||  | ||||||||||||||    
T  26780043 ttttattcgtgaatatctcttctcataaatttaacttatgatggttgtgataagaataagaat 26779981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 102 - 274
Target Start/End: Original strand, 28564258 - 28564429
Alignment:
Q  102 tggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtatggg 201  Q
    ||||||||| || | || ||||||||||||||||||||||||||| ||| || |||||||||||| |||| || | |  ||||||||||||| ||   ||    
T  28564258 tggaacattcatataatgttggaagaaaaattggaagattaaacaccaaata-ttatactttgatctaatgttgtgtacattgaaaaaatagtgtggagg 28564356  T
Q  202 tcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 274  Q
    | ||||||||||| ||||||||||||||| | ||||||||||  |||||||||||||||||| ||||||||||    
T  28564357 ttccacataaaatagaacacacacattagtagtgtttaaattacggtatttaattttaaatatttgataatga 28564429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 114 - 274
Target Start/End: Original strand, 18875357 - 18875519
Alignment:
Q  114 gtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat--gggtcccacataa 211  Q
    ||||| ||||||||||||||||||||||||| |   | |||||| | |||||| |||| || | |||||||||||||||| || |  ||||||||||||     
T  18875357 gtgatgttggaagaaaaattggaagattaaatactgagtaattaaattttgatctaatgttgtgtgaattgaaaaaatagtgtgtaggggtcccacatac 18875456  T
Q  212 aatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 274  Q
    ||| ||||||||| ||||| | ||||||||||| |||||||||||||||||||||||||||||    
T  18875457 aatagaacacacatattagtagtgtttaaattgcggtatttaattttaaatacttgataatga 18875519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 178 - 274
Target Start/End: Complemental strand, 33417590 - 33417492
Alignment:
Q  178 tgaattgaaaaaatagagt--atgggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 274  Q
    |||||||||||||||||||  ||||||| |||||||||| ||||||||||||||| | ||||||||||| |||||||||||||||||||||||||||||    
T  33417590 tgaattgaaaaaatagagtgtatgggtctcacataaaatagaacacacacattagtagtgtttaaattgtggtatttaattttaaatacttgataatga 33417492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 99 - 258
Target Start/End: Complemental strand, 7002783 - 7002623
Alignment:
Q  99 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 198  Q
    ||||||||||||| |||||  ||  ||||||| ||| ||||||||||| ||| |||||| |||||||| || |||| | ||||||||||||||||||| |    
T  7002783 tgttggaacattggtgtgaagtttaaagaaaa-ttgaaagattaaacaccaagtaattagactttgatctagtattgtgtgaattgaaaaaatagagtgt 7002685  T
Q  199 ggg--tcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaatttt 258  Q
    |||  || |||||||||| ||| ||| ||||||| | ||||||||||| |||||||||||||    
T  7002684 ggggatctcacataaaatagaatacatacattagtagtgtttaaattgtggtatttaatttt 7002623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 145 - 249
Target Start/End: Complemental strand, 17021348 - 17021243
Alignment:
Q  145 catcaactaattatactttgatataatattatctgaattgaaaaaatagagtatggg-tcccacataaaatggaacacacacattagcaatgtttaaatt 243  Q
    |||||| ||||||||||||||| |||| || | ||||||||||||||||||| |||| ||||||||||||| ||||||||||||||| | ||||||||||    
T  17021348 catcaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtggggtcccacataaaatagaacacacacattagtagtgtttaaatt 17021249  T
Q  244 gaggta 249  Q
    | ||||    
T  17021248 gcggta 17021243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 145 - 249
Target Start/End: Complemental strand, 17551785 - 17551680
Alignment:
Q  145 catcaactaattatactttgatataatattatctgaattgaaaaaatagagtatggg-tcccacataaaatggaacacacacattagcaatgtttaaatt 243  Q
    |||||| ||||||||||||||| |||| || | ||||||||||||||||||| |||| ||||||||||||| ||||||||||||||| | ||||||||||    
T  17551785 catcaagtaattatactttgatctaatgttgtgtgaattgaaaaaatagagtgtggggtcccacataaaatagaacacacacattagtagtgtttaaatt 17551686  T
Q  244 gaggta 249  Q
    | ||||    
T  17551685 gcggta 17551680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 416 - 474
Target Start/End: Original strand, 18876300 - 18876358
Alignment:
Q  416 tttgagggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgta 474  Q
    |||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||    
T  18876300 tttgagggtgtaattctcgaacggttttctacagtgcagtagttaaccgcacagttgta 18876358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 416 - 474
Target Start/End: Complemental strand, 19166796 - 19166738
Alignment:
Q  416 tttgagggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgta 474  Q
    |||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  19166796 tttgagggtgtaattctcgaacggttttctatagtgcagtagttaacagcacagttgta 19166738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 417 - 472
Target Start/End: Original strand, 31449800 - 31449855
Alignment:
Q  417 ttgagggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttg 472  Q
    |||| |||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  31449800 ttgaaggtgtaattctcgaacggttttctacagtgcagtagttaaccgcacagttg 31449855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 416 - 474
Target Start/End: Complemental strand, 33416708 - 33416651
Alignment:
Q  416 tttgagggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgta 474  Q
    |||||||||||||||||||||| |||||||| |||||| ||||||||||||||||||||    
T  33416708 tttgagggtgtaattctcgaacggttttctacagtgca-tagttaaccgcacagttgta 33416651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 98 - 146
Target Start/End: Complemental strand, 33417651 - 33417603
Alignment:
Q  98 ctgttggaacattgatgtgatcttggaagaaaaattggaagattaaaca 146  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||    
T  33417651 ctgttggaacattgatgtgatgttggatgaaaaattggaagattaaaca 33417603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 416 - 483
Target Start/End: Complemental strand, 1807635 - 1807568
Alignment:
Q  416 tttgagggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgtaactgaactt 483  Q
    ||||| ||||||| |||||||| |||||||| |||||| |||||||||||||||||||| ||| ||||    
T  1807635 tttgaaggtgtaaatctcgaacggttttctacagtgcactagttaaccgcacagttgtagctggactt 1807568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 99 - 274
Target Start/End: Original strand, 23547568 - 23547738
Alignment:
Q  99 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 198  Q
    ||||||||||||| | | || ||| ||||||||||| ||||||||||||  | |||||||| ||| || |||| ||   ||||| ||||||||||| |||    
T  23547568 tgttggaacattggtttaatgttgaaagaaaaattgaaagattaaacattgaataattatattttaatctaatgttgcatgaatcgaaaaaatagaatat 23547667  T
Q  199 --gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 274  Q
      ||||| |||||||| | ||||||| |  |||      ||||||||| |||||||||||||||||||||||||||||    
T  23547668 cggggtctcacataaattagaacacata--ttaa-----tttaaattgcggtatttaattttaaatacttgataatga 23547738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 416 - 474
Target Start/End: Original strand, 38182170 - 38182228
Alignment:
Q  416 tttgagggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgta 474  Q
    ||||| ||||||| |||||||| ||||| |||||||||||||||||| |||||||||||    
T  38182170 tttgaaggtgtaaatctcgaacggttttttatagtgcagtagttaacagcacagttgta 38182228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 416 - 474
Target Start/End: Original strand, 44925857 - 44925914
Alignment:
Q  416 tttgagggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgta 474  Q
    |||||||||||||||||||||| |||||||| |||||| |||||||||||| |||||||    
T  44925857 tttgagggtgtaattctcgaacggttttctacagtgca-tagttaaccgcatagttgta 44925914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 417 - 474
Target Start/End: Original strand, 4238275 - 4238332
Alignment:
Q  417 ttgagggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgta 474  Q
    |||| |||||||||||||||| |||||||| |||||||||||||| || |||||||||    
T  4238275 ttgaaggtgtaattctcgaacggttttctacagtgcagtagttaatcgaacagttgta 4238332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 417 - 474
Target Start/End: Original strand, 4243014 - 4243071
Alignment:
Q  417 ttgagggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgta 474  Q
    |||| |||||||||||||||| |||||||| |||||||||||||| || |||||||||    
T  4243014 ttgaaggtgtaattctcgaacggttttctacagtgcagtagttaatcgaacagttgta 4243071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 422 - 474
Target Start/End: Complemental strand, 17026091 - 17026039
Alignment:
Q  422 ggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgta 474  Q
    |||||||||||||||| |||||||| |||||||||||||| || |||||||||    
T  17026091 ggtgtaattctcgaacggttttctacagtgcagtagttaatcgaacagttgta 17026039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 422 - 474
Target Start/End: Complemental strand, 17556583 - 17556531
Alignment:
Q  422 ggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgta 474  Q
    |||||||||||||||| |||||||| |||||||||||||| || |||||||||    
T  17556583 ggtgtaattctcgaacggttttctacagtgcagtagttaatcgaacagttgta 17556531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 422 - 474
Target Start/End: Complemental strand, 34118622 - 34118570
Alignment:
Q  422 ggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgta 474  Q
    ||||||| |||||||||||||||||  |||||||||||||| |||||||||||    
T  34118622 ggtgtaaatctcgaacagttttctacggtgcagtagttaacagcacagttgta 34118570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 417 - 469
Target Start/End: Original strand, 43302625 - 43302677
Alignment:
Q  417 ttgagggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacag 469  Q
    |||| ||||||||||||||||  ||||||| ||||||||||||||||||||||    
T  43302625 ttgaaggtgtaattctcgaacgattttctacagtgcagtagttaaccgcacag 43302677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 423 - 474
Target Start/End: Original strand, 1910909 - 1910960
Alignment:
Q  423 gtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgta 474  Q
    |||||| |||||||  |||||||| |||||||||||||||||||||||||||    
T  1910909 gtgtaaatctcgaatggttttctacagtgcagtagttaaccgcacagttgta 1910960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 416 - 479
Target Start/End: Original strand, 15875601 - 15875664
Alignment:
Q  416 tttgagggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgtaactga 479  Q
    |||||| |||||||||| |||| ||||||||||||||||||||||| || ||| ||||| ||||    
T  15875601 tttgagagtgtaattcttgaacggttttctatagtgcagtagttaatcgtacaattgtagctga 15875664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 416 - 471
Target Start/End: Original strand, 17953805 - 17953860
Alignment:
Q  416 tttgagggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagtt 471  Q
    ||||||||||||||||||||||  ||||||| |||||||||||||| | |||||||    
T  17953805 tttgagggtgtaattctcgaacgattttctacagtgcagtagttaatcacacagtt 17953860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 416 - 479
Target Start/End: Complemental strand, 36683741 - 36683678
Alignment:
Q  416 tttgagggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgtaactga 479  Q
    |||||||||||||||||| |||  ||||||| |||||||||||||| ||||||| |||| ||||    
T  36683741 tttgagggtgtaattctcaaacgattttctacagtgcagtagttaatcgcacagatgtagctga 36683678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 299 - 345
Target Start/End: Complemental strand, 19168710 - 19168664
Alignment:
Q  299 tattatttttattcgtgaatatcacttcccataaatttagcctatgg 345  Q
    ||||||||||||||  ||||||||||||||||||||||||| |||||    
T  19168710 tattatttttattctagaatatcacttcccataaatttagcttatgg 19168664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 417 - 474
Target Start/End: Complemental strand, 10933592 - 10933535
Alignment:
Q  417 ttgagggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgta 474  Q
    |||| ||||||||||||||||| || |||| |||||||||||||| | ||||||||||    
T  10933592 ttgaaggtgtaattctcgaacaattctctacagtgcagtagttaatcacacagttgta 10933535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 299 - 344
Target Start/End: Original strand, 22714149 - 22714194
Alignment:
Q  299 tattatttttattcgtgaatatcacttcccataaatttagcctatg 344  Q
    |||||||||||||| || ||||||||||||||||||||||| ||||    
T  22714149 tattatttttattcatggatatcacttcccataaatttagcttatg 22714194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 299 - 367
Target Start/End: Complemental strand, 17027086 - 17027018
Alignment:
Q  299 tattatttttattcgtgaatatcacttcccataaatttagcctatggtagtcataataagaataagaat 367  Q
    ||||||||||||||| |||||||||||  |||||||||||| || ||| ||  | ||||||||||||||    
T  17027086 tattatttttattcgagaatatcacttttcataaatttagcttaaggtggttgtgataagaataagaat 17027018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 299 - 367
Target Start/End: Complemental strand, 17557578 - 17557510
Alignment:
Q  299 tattatttttattcgtgaatatcacttcccataaatttagcctatggtagtcataataagaataagaat 367  Q
    ||||||||||||||| |||||||||||  |||||||||||| || ||| ||  | ||||||||||||||    
T  17557578 tattatttttattcgagaatatcacttttcataaatttagcttaaggtggttgtgataagaataagaat 17557510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 416 - 483
Target Start/End: Complemental strand, 2965792 - 2965725
Alignment:
Q  416 tttgagggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgtaactgaactt 483  Q
    ||||||||||||| |||| ||  |||||||| ||||||||||||||| ||| ||||||| ||| ||||    
T  2965792 tttgagggtgtaaatctcaaatggttttctacagtgcagtagttaactgcatagttgtagctggactt 2965725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 420 - 483
Target Start/End: Original strand, 23548569 - 23548632
Alignment:
Q  420 agggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgtaactgaactt 483  Q
    |||||| || ||| |||| |||||||| | |||||||||||||||| |||||||| ||||||||    
T  23548569 agggtgaaaatcttgaacggttttctacaatgcagtagttaaccgcgcagttgtagctgaactt 23548632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 98 - 159
Target Start/End: Complemental strand, 17027226 - 17027165
Alignment:
Q  98 ctgttggaacattgatgtgatcttggaag-aaaaattggaagattaaacatcaactaattata 159  Q
    ||||||||||||| ||||||| ||||| | |||||||||||||||||||| ||| ||||||||    
T  17027226 ctgttggaacattaatgtgatgttggatgaaaaaattggaagattaaacaccaa-taattata 17027165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 98 - 159
Target Start/End: Complemental strand, 17557718 - 17557657
Alignment:
Q  98 ctgttggaacattgatgtgatcttggaag-aaaaattggaagattaaacatcaactaattata 159  Q
    ||||||||||||| ||||||| ||||| | |||||||||||||||||||| ||| ||||||||    
T  17557718 ctgttggaacattaatgtgatgttggatgaaaaaattggaagattaaacaccaa-taattata 17557657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 302 - 367
Target Start/End: Original strand, 1910102 - 1910167
Alignment:
Q  302 tatttttattcgtgaatatcacttcccataaatttagcctatggtagtcataataagaataagaat 367  Q
    |||||||||||| |||||||||||| ||||||||||   |||||| ||  | ||||||||||||||    
T  1910102 tatttttattcgagaatatcacttctcataaatttaatttatggtggttgtgataagaataagaat 1910167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 178 - 262
Target Start/End: Original strand, 17953183 - 17953267
Alignment:
Q  178 tgaattgaaaaaatagagtat-gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaat 262  Q
    ||||||||||||||||||| | |||| ||||| ||||| |||||||||||| || | ||||| ||| | ||||||| |||||||||    
T  17953183 tgaattgaaaaaatagagtgtggggtaccacaaaaaatagaacacacacatcagtagtgttt-aatagtggtattttattttaaat 17953267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 185 - 274
Target Start/End: Original strand, 24672364 - 24672453
Alignment:
Q  185 aaaaaatagagtatgggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 274  Q
    ||||||||||||  |||||||| ||||||| || ||| || || |  | ||||||||||| | ||||||||| ||||||||| |||||||    
T  24672364 aaaaaatagagtgggggtcccaaataaaatagagcacgcagatcaatagtgtttaaattgtgatatttaattgtaaatacttaataatga 24672453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 417 - 478
Target Start/End: Original strand, 28559588 - 28559649
Alignment:
Q  417 ttgagggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgtaactg 478  Q
    |||| |||||||||||||||| ||||| || |||||| ||||||| || |||||| ||||||    
T  28559588 ttgaaggtgtaattctcgaacggttttttacagtgcaatagttaatcgaacagttctaactg 28559649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 200 - 274
Target Start/End: Complemental strand, 33100623 - 33100550
Alignment:
Q  200 ggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaatttt-aaatacttgataatga 274  Q
    ||||||||||||||| ||| |||||  |||  ||| |||||||||  |||||||||||| ||||||||||||||||    
T  33100623 ggtcccacataaaatagaatacaca--ttaataatctttaaattgcagtatttaatttttaaatacttgataatga 33100550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 422 - 474
Target Start/End: Original strand, 40125824 - 40125876
Alignment:
Q  422 ggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgta 474  Q
    ||||||||||||||||  |||||||  ||||||||||||| || |||||||||    
T  40125824 ggtgtaattctcgaacgattttctacggtgcagtagttaatcgaacagttgta 40125876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0690 (Bit Score: 93; Significance: 4e-45; HSPs: 1)
Name: scaffold0690
Description:

Target: scaffold0690; HSP #1
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 99 - 367
Target Start/End: Complemental strand, 6372 - 6109
Alignment:
Q  99 tgttggaacattgatgtgatcttggaagaaaaa-ttggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagta 197  Q
    ||||||||||||| || ||| |||||||||||| ||  || |||||||| ||| ||||||||||| ||| |||| |||| |||||||||||||||||||     
T  6372 tgttggaacattggtgcgatgttggaagaaaaaattataaaattaaacaccaagtaattatacttcgatctaatgttatgtgaattgaaaaaatagagtg 6273  T
Q  198 tgg--gtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattat 295  Q
    | |  ||||||||||| || ||| |||||||||||   ||||||||||| |||||||||||||||||||||||||||||        ||||||||||       
T  6272 ttgaggtcccacataagatagaatacacacattagtggtgtttaaattgtggtatttaattttaaatacttgataatga--taaaaataatagtaat--- 6178  T
Q  296 tactattatttttattcgtgaatatcacttcccataaatttagcctatggtagtcataataagaataagaat 367  Q
       ||||||||||||||||||||||||||||||||||||||||| |||||  ||  | ||||||||||||||    
T  6177 ---tattatttttattcgtgaatatcacttcccataaatttagcttatggaggttgtgataagaataagaat 6109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 91; Significance: 7e-44; HSPs: 4)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 99 - 270
Target Start/End: Complemental strand, 5203 - 5030
Alignment:
Q  99 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 198  Q
    |||||||||||||||||||| ||||| ||||||||| ||||||||||| ||| | | ||||||||||| |||| || | ||||||||||||||||||| |    
T  5203 tgttggaacattgatgtgatgttggatgaaaaattgaaagattaaacaccaagttaatatactttgatctaatgttgtgtgaattgaaaaaatagagtgt 5104  T
Q  199 --gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgata 270  Q
      ||||||| |||||||| |||||| |||||||| | ||||||||||| |||||||||||||||||||||||||    
T  5103 gggggtcccgcataaaatagaacactcacattagtagtgtttaaattgtggtatttaattttaaatacttgata 5030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 99 - 274
Target Start/End: Original strand, 442897 - 443073
Alignment:
Q  99 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 198  Q
    |||||||| |||  |||||| |||||| | ||||||||||||||||||| || ||||||||||||||| |||| || | ||||||||||||||||||| |    
T  442897 tgttggaatattactgtgatgttggaaaataaattggaagattaaacattaaataattatactttgatctaatgttgtgtgaattgaaaaaatagagtgt 442996  T
Q  199 -gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatga 274  Q
     |||||||||||||||| |||||||||||||||    |||||||||| |||||||||||||||||| ||||||||||    
T  442997 ggggtcccacataaaatagaacacacacattagttgggtttaaattgtggtatttaattttaaatatttgataatga 443073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 416 - 474
Target Start/End: Original strand, 443879 - 443936
Alignment:
Q  416 tttgagggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgta 474  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  443879 tttgagggtgtaattctcgaacggttttctatagtgca-tagttaaccgcacagttgta 443936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 422 - 474
Target Start/End: Complemental strand, 4230 - 4178
Alignment:
Q  422 ggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgta 474  Q
    ||||||||||||||||  ||||||| |||||||||||||| || |||||||||    
T  4230 ggtgtaattctcgaacgattttctacagtgcagtagttaatcgaacagttgta 4178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 83; Significance: 4e-39; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 102 - 367
Target Start/End: Complemental strand, 36257 - 36000
Alignment:
Q  102 tggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtatggg 201  Q
    |||||||||  |||||| ||| || | |||||| ||||||||||| ||| |||||||| |||||| |||| || | ||||||||||||||||||| ||||    
T  36257 tggaacattagtgtgatgttgaaaaataaattgaaagattaaacaccaaataattatattttgatctaatgttgtatgaattgaaaaaatagagtgtggg 36158  T
Q  202 tccc-acataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattattacta 300  Q
     ||| ||||||||| |||| ||| |||||| | |||||||| || |||||||||||||||||| ||||||||||        ||||||||||      ||    
T  36157 gccccacataaaatagaactcacgcattagtagtgtttaaactgcggtatttaattttaaatatttgataatga--taaaaataatagtaat------ta 36066  T
Q  301 ttatttttattcgtgaatatcacttcccataaatttagcctatggtagtcataataagaataagaat 367  Q
    ||||||||||| |||||||||||||||||||||||||| ||||||| ||  | ||||||||||||||    
T  36065 ttatttttatttgtgaatatcacttcccataaatttag-ctatggtggttgtgataagaataagaat 36000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 430 - 483
Target Start/End: Complemental strand, 35782 - 35729
Alignment:
Q  430 tctcgaacagttttctatagtgcagtagttaaccgcacagttgtaactgaactt 483  Q
    ||||||||  ||||||| ||||||||||||||||||||||||||| ||| ||||    
T  35782 tctcgaacgattttctacagtgcagtagttaaccgcacagttgtagctggactt 35729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 82; Significance: 2e-38; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 99 - 338
Target Start/End: Complemental strand, 5108 - 4877
Alignment:
Q  99 tgttggaacattgatgtgatcttggaagaaaaattggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat 198  Q
    ||||||| ||||| |||||| ||||||||||||||| ||||||||||| ||  ||||||||||||||| |||| || | ||||||||||||||| ||| |    
T  5108 tgttggatcattggtgtgatgttggaagaaaaattgaaagattaaacaccacgtaattatactttgatctaatgttgtgtgaattgaaaaaatatagtgt 5009  T
Q  199 -gggtcccacataaaatggaacacacacattagcaatgtttaaattgaggtatttaattttaaatacttgataatgagnnnnnnntaatagtaattatta 297  Q
     |||| |||||||||||  |  ||||| |||||   ||||||| ||| |||||||||||||||||||||||||||||        ||||||||||         
T  5008 ggggtaccacataaaat--ataacacatattagttgtgtttaagttgcggtatttaattttaaatacttgataatga-taaaaaataatagtaat----- 4917  T
Q  298 ctattatttttattcgtgaatatcacttcccataaatttag 338  Q
     ||||||||||||||||||||||||||||||||||||||||    
T  4916 -tattatttttattcgtgaatatcacttcccataaatttag 4877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 132 - 259
Target Start/End: Original strand, 64885 - 65013
Alignment:
Q  132 ttggaagattaaacatcaactaattatactttgatataatattatctgaattgaaaaaatagagtat--gggtcccacataaaatggaacacacacatta 229  Q
    ||||||||||||||| ||| |||||| |||||||| || | || | |||||| |||||||||||| |  |||||||||||||||| ||||||||||||||    
T  64885 ttggaagattaaaca-caagtaattaaactttgatctagtgttgtgtgaattaaaaaaatagagtgtaggggtcccacataaaatagaacacacacatta 64983  T
Q  230 gcaatgtttaaattgaggtatttaatttta 259  Q
    | | | ||||||| | ||||||||| ||||    
T  64984 gtagtctttaaatagtggtatttaaattta 65013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 416 - 483
Target Start/End: Complemental strand, 255979 - 255912
Alignment:
Q  416 tttgagggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgtaactgaactt 483  Q
    |||||||||||||| ||||||| |||||||| |||||||||||||||| |||||||||| ||| ||||    
T  255979 tttgagggtgtaatcctcgaacggttttctacagtgcagtagttaaccacacagttgtagctggactt 255912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1050 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold1050
Description:

Target: scaffold1050; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 417 - 483
Target Start/End: Complemental strand, 1301 - 1235
Alignment:
Q  417 ttgagggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgtaactgaactt 483  Q
    |||| ||||||| ||||||||  ||||||||||||||||||||||||||||||| ||| ||||||||    
T  1301 ttgaaggtgtaaatctcgaacgattttctatagtgcagtagttaaccgcacagtcgtagctgaactt 1235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 417 - 472
Target Start/End: Complemental strand, 83227 - 83172
Alignment:
Q  417 ttgagggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttg 472  Q
    |||| |||||||||||||||  |||||||| |||||||||||||||||||||||||    
T  83227 ttgaaggtgtaattctcgaaaggttttctacagtgcagtagttaaccgcacagttg 83172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 422 - 474
Target Start/End: Original strand, 9826 - 9878
Alignment:
Q  422 ggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgta 474  Q
    |||||||||||||||| |||||||| |||||||||||||| || |||||||||    
T  9826 ggtgtaattctcgaacggttttctacagtgcagtagttaatcgaacagttgta 9878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 422 - 472
Target Start/End: Original strand, 166025 - 166075
Alignment:
Q  422 ggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttg 472  Q
    |||||||||||||||| ||||| || ||||||||| |||||||||||||||    
T  166025 ggtgtaattctcgaacggttttttacagtgcagtaattaaccgcacagttg 166075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2020 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold2020
Description:

Target: scaffold2020; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 416 - 465
Target Start/End: Complemental strand, 539 - 490
Alignment:
Q  416 tttgagggtgtaattctcgaacagttttctatagtgcagtagttaaccgc 465  Q
    ||||||||||||| |||| ||| |||||||| ||||||||||||||||||    
T  539 tttgagggtgtaaatctcaaacggttttctacagtgcagtagttaaccgc 490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 416 - 465
Target Start/End: Original strand, 164956 - 165005
Alignment:
Q  416 tttgagggtgtaattctcgaacagttttctatagtgcagtagttaaccgc 465  Q
    ||||||||||||| |||| ||| |||||||| ||||||||||||||||||    
T  164956 tttgagggtgtaaatctcaaacggttttctacagtgcagtagttaaccgc 165005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 420 - 479
Target Start/End: Complemental strand, 2466 - 2407
Alignment:
Q  420 agggtgtaattctcgaacagttttctatagtgcagtagttaaccgcacagttgtaactga 479  Q
    |||||||||||||| |||| |||||||  ||||||||||||| | |||||||||| ||||    
T  2466 agggtgtaattctccaacaattttctacggtgcagtagttaatctcacagttgtacctga 2407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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