View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20398_high_32 (Length: 280)
Name: NF20398_high_32
Description: NF20398
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20398_high_32 |
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Alignment Details
Target: chr6 (Bit Score: 251; Significance: 1e-139; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 17 - 271
Target Start/End: Original strand, 553159 - 553413
Alignment:
| Q |
17 |
aattaggactacaatattggagatgaagctcaccttatgctactgctgtgacatctatcgattctacacccaacgcaataagcctaaaagtcacaattat |
116 |
Q |
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| T |
553159 |
aattaggactacaatattggagatgaagctcaccttatgctactgctgtgacatctatcgattctacacccaacgcaataagcctaaaagtcacaattat |
553258 |
T |
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| Q |
117 |
tttcaaccatcaaaagcagttttataactagtttttaacatttttctttatcaacacaacatattaagacatttgtatatttttattgaaactattgtca |
216 |
Q |
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| T |
553259 |
tttcaaccatcaaaagcagttttataactagtttttaacatttttctttatcaacacaacataataagacatttgtatatttttattgaaactattgtca |
553358 |
T |
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| Q |
217 |
atacttaaaagaaaaattgatcaaacaagactcaactcatcaattattaaatatt |
271 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
553359 |
atacttaaaagaaaaattgatcaaacaagactcaactcatcaattattaaatatt |
553413 |
T |
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