View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20402_high_17 (Length: 281)
Name: NF20402_high_17
Description: NF20402
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20402_high_17 |
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Alignment Details
Target: chr2 (Bit Score: 198; Significance: 1e-108; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 53 - 262
Target Start/End: Original strand, 19075665 - 19075874
Alignment:
| Q |
53 |
tagcttaccaatgcattcaccgaactcttctctatcgagtaaaccatccttagcaagaaaaccaaacctctcttcaacttttctccataactcctcactt |
152 |
Q |
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| T |
19075665 |
tagcttaccaatgcattcaccgaactcttctctatcgagtaaaccatccttagcaagaaaaccaaacctctcttcaacttttctccataactcctcactt |
19075764 |
T |
|
| Q |
153 |
gcttcaccagacttactaataaatctcaatcctttcaaacctctctgagcactcgatctcgtccgttcaagttccgctctcattctccgtgcatttcgcg |
252 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| ||||||||||||| |
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| T |
19075765 |
gcttcaccagacttactaataaatctcaatcctttcaaacctctttgagcacttgatctcgtccgttcaagttccgctctcattcttcgtgcatttcgcg |
19075864 |
T |
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| Q |
253 |
ccatcatcgg |
262 |
Q |
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| T |
19075865 |
ccatcatcgg |
19075874 |
T |
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