View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20402_high_8 (Length: 364)

Name: NF20402_high_8
Description: NF20402
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20402_high_8
NF20402_high_8
[»] chr6 (30 HSPs)
chr6 (183-364)||(34364774-34364956)
chr6 (185-364)||(13487306-13487485)
chr6 (185-364)||(29889296-29889476)
chr6 (185-364)||(34244843-34245022)
chr6 (308-364)||(15832497-15832553)
chr6 (308-364)||(28918196-28918252)
chr6 (184-245)||(8475618-8475679)
chr6 (181-245)||(1195793-1195857)
chr6 (183-243)||(15615918-15615978)
chr6 (311-364)||(9763043-9763096)
chr6 (185-245)||(1368965-1369025)
chr6 (308-364)||(9697493-9697549)
chr6 (321-364)||(6919739-6919782)
chr6 (185-243)||(10105497-10105555)
chr6 (312-357)||(1195371-1195416)
chr6 (321-362)||(6358250-6358291)
chr6 (308-357)||(8475199-8475248)
chr6 (311-364)||(9285678-9285731)
chr6 (313-362)||(26901755-26901804)
chr6 (183-243)||(724809-724869)
chr6 (181-233)||(6357821-6357873)
chr6 (320-364)||(15299509-15299553)
chr6 (308-356)||(31412940-31412988)
chr6 (308-350)||(15616347-15616389)
chr6 (311-364)||(776155-776208)
chr6 (247-288)||(13487301-13487342)
chr6 (323-363)||(15299431-15299471)
chr6 (187-243)||(31413351-31413407)
chr6 (248-288)||(34244987-34245027)
chr6 (247-287)||(34364770-34364810)
[»] chr4 (62 HSPs)
chr4 (183-364)||(10633063-10633243)
chr4 (183-357)||(21012437-21012611)
chr4 (185-364)||(31473880-31474059)
chr4 (183-250)||(3803709-3803776)
chr4 (308-364)||(1539672-1539728)
chr4 (188-245)||(47108708-47108765)
chr4 (185-245)||(40547768-40547828)
chr4 (186-245)||(27284221-27284280)
chr4 (182-245)||(46242619-46242682)
chr4 (185-243)||(30303610-30303668)
chr4 (308-357)||(17727103-17727152)
chr4 (308-357)||(40338238-40338287)
chr4 (308-357)||(42775643-42775692)
chr4 (188-245)||(42776573-42776630)
chr4 (308-357)||(56339171-56339220)
chr4 (308-364)||(2125888-2125944)
chr4 (185-245)||(2126326-2126386)
chr4 (308-364)||(16516202-16516258)
chr4 (185-245)||(19461266-19461326)
chr4 (308-364)||(29091168-29091224)
chr4 (308-364)||(35470153-35470209)
chr4 (185-245)||(35470612-35470672)
chr4 (185-245)||(42775780-42775840)
chr4 (185-243)||(21782463-21782521)
chr4 (187-245)||(31948061-31948119)
chr4 (183-245)||(41139960-41140022)
chr4 (307-361)||(42776671-42776725)
chr4 (320-364)||(14982311-14982355)
chr4 (308-364)||(26534524-26534580)
chr4 (321-364)||(4896717-4896760)
chr4 (312-363)||(16300209-16300260)
chr4 (188-234)||(5579654-5579700)
chr4 (311-357)||(27284651-27284697)
chr4 (183-245)||(28751742-28751804)
chr4 (308-362)||(41139506-41139560)
chr4 (311-364)||(857270-857323)
chr4 (247-288)||(10633058-10633099)
chr4 (311-364)||(15660258-15660311)
chr4 (247-288)||(31473875-31473916)
chr4 (308-357)||(40548204-40548253)
chr4 (309-358)||(46242531-46242580)
chr4 (311-363)||(10128049-10128101)
chr4 (189-237)||(16299781-16299829)
chr4 (183-243)||(24705820-24705880)
chr4 (183-243)||(54566664-54566724)
chr4 (321-364)||(857324-857367)
chr4 (321-364)||(49111397-49111440)
chr4 (307-362)||(52493958-52494012)
chr4 (186-245)||(56118170-56118229)
chr4 (320-362)||(1112638-1112680)
chr4 (322-364)||(11040998-11041040)
chr4 (185-235)||(16516666-16516716)
chr4 (321-362)||(1112707-1112748)
chr4 (247-288)||(1539667-1539708)
chr4 (212-245)||(26534976-26535009)
chr4 (311-364)||(28845902-28845955)
chr4 (311-364)||(36455938-36455991)
chr4 (311-364)||(42844574-42844627)
chr4 (308-357)||(52295031-52295080)
chr4 (308-357)||(53760776-53760825)
chr4 (321-357)||(26250994-26251030)
chr4 (320-364)||(41498574-41498618)
[»] chr3 (63 HSPs)
chr3 (185-362)||(8762159-8762336)
chr3 (180-364)||(19475847-19476031)
chr3 (183-357)||(54761424-54761598)
chr3 (182-313)||(33871761-33871892)
chr3 (183-357)||(47714307-47714488)
chr3 (308-364)||(21307517-21307573)
chr3 (189-245)||(34396148-34396204)
chr3 (178-245)||(7977040-7977107)
chr3 (187-245)||(28181800-28181858)
chr3 (310-364)||(42005940-42005994)
chr3 (185-245)||(48948071-48948131)
chr3 (182-245)||(21731408-21731471)
chr3 (181-236)||(52527508-52527563)
chr3 (183-245)||(34089065-34089127)
chr3 (310-364)||(37054425-37054479)
chr3 (183-245)||(38506482-38506544)
chr3 (188-245)||(48824637-48824694)
chr3 (308-364)||(7976579-7976635)
chr3 (308-364)||(30766584-30766640)
chr3 (185-245)||(36397511-36397571)
chr3 (308-364)||(47767463-47767519)
chr3 (308-364)||(53129828-53129884)
chr3 (185-245)||(53469951-53470011)
chr3 (308-364)||(53470414-53470470)
chr3 (191-246)||(28092152-28092206)
chr3 (182-245)||(35279467-35279530)
chr3 (183-245)||(671186-671248)
chr3 (183-245)||(43863484-43863546)
chr3 (184-233)||(21307110-21307159)
chr3 (311-364)||(31070437-31070490)
chr3 (185-245)||(24241711-24241771)
chr3 (308-364)||(34088602-34088658)
chr3 (308-364)||(36397974-36398030)
chr3 (308-364)||(48947636-48947692)
chr3 (191-234)||(645741-645784)
chr3 (308-363)||(7302378-7302433)
chr3 (321-364)||(9129429-9129472)
chr3 (321-364)||(9137536-9137579)
chr3 (321-364)||(27251979-27252022)
chr3 (321-364)||(44692907-44692950)
chr3 (321-364)||(46672801-46672844)
chr3 (308-364)||(46706681-46706739)
chr3 (310-364)||(671606-671660)
chr3 (311-357)||(38506864-38506910)
chr3 (308-357)||(9007440-9007489)
chr3 (309-350)||(28182234-28182275)
chr3 (321-362)||(44436343-44436384)
chr3 (205-245)||(19475736-19475776)
chr3 (310-362)||(31189384-31189436)
chr3 (185-245)||(50168191-50168251)
chr3 (182-245)||(2105219-2105282)
chr3 (307-362)||(47336914-47336969)
chr3 (307-361)||(13176546-13176600)
chr3 (311-361)||(21730936-21730985)
chr3 (308-357)||(2104772-2104821)
chr3 (247-288)||(19475842-19475883)
chr3 (308-357)||(26323394-26323443)
chr3 (321-362)||(28092247-28092288)
chr3 (307-348)||(34396491-34396532)
chr3 (321-357)||(332012-332048)
chr3 (324-364)||(5415814-5415854)
chr3 (240-288)||(31189395-31189443)
chr3 (308-352)||(43863936-43863979)
[»] chr7 (73 HSPs)
chr7 (185-364)||(26161987-26162165)
chr7 (178-364)||(29639056-29639243)
chr7 (185-364)||(6498614-6498793)
chr7 (186-364)||(31632753-31632928)
chr7 (285-364)||(35776904-35776983)
chr7 (183-245)||(14602769-14602831)
chr7 (185-245)||(14790557-14790617)
chr7 (308-364)||(22391559-22391615)
chr7 (185-245)||(43791511-43791571)
chr7 (183-245)||(39342158-39342220)
chr7 (180-245)||(35456294-35456359)
chr7 (308-364)||(30524286-30524342)
chr7 (187-243)||(38320770-38320825)
chr7 (308-364)||(43791121-43791177)
chr7 (307-362)||(25189197-25189252)
chr7 (183-245)||(2411801-2411863)
chr7 (183-245)||(40496208-40496270)
chr7 (308-357)||(32650611-32650660)
chr7 (308-357)||(40667379-40667428)
chr7 (308-364)||(23455219-23455275)
chr7 (185-245)||(23548119-23548179)
chr7 (185-245)||(28538677-28538737)
chr7 (308-364)||(28539140-28539196)
chr7 (308-364)||(30629088-30629144)
chr7 (185-245)||(36328328-36328388)
chr7 (185-245)||(42817012-42817072)
chr7 (182-245)||(30587427-30587490)
chr7 (307-357)||(30080772-30080822)
chr7 (185-243)||(37460470-37460528)
chr7 (185-243)||(45181757-45181814)
chr7 (311-364)||(5644708-5644761)
chr7 (308-357)||(14790151-14790200)
chr7 (312-357)||(19865530-19865575)
chr7 (311-364)||(29065850-29065903)
chr7 (311-364)||(46069422-46069475)
chr7 (308-364)||(9784903-9784959)
chr7 (308-364)||(23548583-23548639)
chr7 (185-233)||(35488714-35488761)
chr7 (308-364)||(39342614-39342670)
chr7 (185-245)||(45984823-45984883)
chr7 (185-245)||(45989183-45989243)
chr7 (308-363)||(18789218-18789273)
chr7 (312-363)||(18789549-18789600)
chr7 (321-364)||(40110823-40110866)
chr7 (308-357)||(13814966-13815015)
chr7 (311-364)||(21635960-21636013)
chr7 (247-288)||(26162129-26162170)
chr7 (308-357)||(30587875-30587924)
chr7 (247-288)||(31632748-31632789)
chr7 (247-288)||(35776947-35776988)
chr7 (308-357)||(40495755-40495804)
chr7 (308-357)||(45984378-45984427)
chr7 (308-357)||(45988738-45988787)
chr7 (311-364)||(49052860-49052913)
chr7 (308-364)||(14603234-14603290)
chr7 (248-288)||(25189219-25189259)
chr7 (185-245)||(32651013-32651073)
chr7 (308-364)||(35455835-35455891)
chr7 (312-364)||(40110768-40110820)
chr7 (324-363)||(2057427-2057466)
chr7 (307-362)||(15990924-15990979)
chr7 (184-243)||(40495691-40495750)
chr7 (308-347)||(42816597-42816636)
chr7 (185-242)||(1580381-1580439)
chr7 (308-358)||(3905631-3905681)
chr7 (238-288)||(15990917-15990967)
chr7 (247-289)||(43791115-43791157)
chr7 (311-364)||(2057470-2057523)
chr7 (308-345)||(26416003-26416040)
chr7 (185-242)||(26416413-26416469)
chr7 (248-288)||(6498758-6498798)
chr7 (189-245)||(30080312-30080368)
chr7 (324-364)||(34388353-34388393)
[»] chr2 (70 HSPs)
chr2 (178-364)||(10480150-10480336)
chr2 (182-364)||(11532111-11532295)
chr2 (185-364)||(11793926-11794105)
chr2 (182-357)||(7684482-7684657)
chr2 (308-357)||(32840178-32840227)
chr2 (182-245)||(769521-769584)
chr2 (183-245)||(1583330-1583392)
chr2 (183-245)||(2925140-2925202)
chr2 (310-364)||(7167655-7167709)
chr2 (183-245)||(33188787-33188849)
chr2 (183-245)||(39630715-39630777)
chr2 (185-245)||(8736501-8736561)
chr2 (308-364)||(30698312-30698368)
chr2 (308-364)||(32839634-32839690)
chr2 (185-245)||(35047201-35047261)
chr2 (182-245)||(3092735-3092798)
chr2 (308-363)||(7227998-7228053)
chr2 (183-245)||(7309434-7309496)
chr2 (179-245)||(19231011-19231076)
chr2 (187-245)||(21504939-21504997)
chr2 (185-243)||(32839188-32839246)
chr2 (308-353)||(1730095-1730140)
chr2 (308-357)||(8736427-8736476)
chr2 (188-245)||(19193746-19193803)
chr2 (184-245)||(44256123-44256184)
chr2 (185-245)||(8735965-8736025)
chr2 (308-364)||(13017810-13017866)
chr2 (185-245)||(13018234-13018294)
chr2 (177-233)||(17906143-17906199)
chr2 (312-359)||(11607257-11607304)
chr2 (185-243)||(14306364-14306422)
chr2 (307-357)||(20935744-20935794)
chr2 (181-243)||(31703919-31703981)
chr2 (307-364)||(28740627-28740684)
chr2 (308-364)||(769067-769123)
chr2 (308-364)||(1583795-1583851)
chr2 (308-364)||(11141336-11141392)
chr2 (308-364)||(11594839-11594895)
chr2 (311-363)||(27033522-27033574)
chr2 (308-364)||(33189243-33189299)
chr2 (308-364)||(45094457-45094513)
chr2 (182-245)||(11141794-11141857)
chr2 (312-359)||(11595355-11595402)
chr2 (321-364)||(11716439-11716482)
chr2 (321-364)||(14365731-14365774)
chr2 (311-358)||(40026101-40026148)
chr2 (183-245)||(19072320-19072382)
chr2 (183-245)||(41585192-41585254)
chr2 (311-364)||(784868-784921)
chr2 (247-288)||(11793921-11793962)
chr2 (311-364)||(41461590-41461643)
chr2 (308-357)||(41585676-41585725)
chr2 (308-364)||(3092313-3092369)
chr2 (179-243)||(7611413-7611477)
chr2 (308-364)||(11606744-11606800)
chr2 (321-364)||(784824-784867)
chr2 (321-364)||(14537230-14537273)
chr2 (308-350)||(7611874-7611916)
chr2 (312-362)||(14954343-14954393)
chr2 (311-357)||(21504488-21504534)
chr2 (185-235)||(28021706-28021756)
chr2 (15-105)||(4746680-4746766)
chr2 (191-240)||(6996371-6996420)
chr2 (311-364)||(10244208-10244261)
chr2 (247-288)||(10480145-10480186)
chr2 (308-353)||(12263468-12263513)
chr2 (325-362)||(41461548-41461585)
chr2 (321-357)||(11684675-11684711)
chr2 (248-288)||(28740622-28740662)
chr2 (308-364)||(39630256-39630311)
[»] chr1 (72 HSPs)
chr1 (182-364)||(47541848-47542030)
chr1 (15-185)||(1389345-1389515)
chr1 (185-364)||(24273084-24273262)
chr1 (190-364)||(26500947-26501121)
chr1 (187-362)||(47165077-47165252)
chr1 (308-363)||(37448387-37448442)
chr1 (307-364)||(8224799-8224856)
chr1 (185-245)||(946869-946929)
chr1 (185-245)||(15467486-15467546)
chr1 (185-237)||(35499546-35499598)
chr1 (308-364)||(49659247-49659303)
chr1 (311-364)||(43622967-43623020)
chr1 (185-245)||(220642-220702)
chr1 (183-243)||(12293020-12293080)
chr1 (308-364)||(37447888-37447944)
chr1 (308-364)||(44570709-44570765)
chr1 (311-364)||(31195487-31195540)
chr1 (311-364)||(34756458-34756511)
chr1 (308-357)||(42230758-42230807)
chr1 (308-357)||(44571239-44571288)
chr1 (311-363)||(6470675-6470727)
chr1 (308-364)||(15467949-15468005)
chr1 (308-364)||(28632572-28632627)
chr1 (180-240)||(41480949-41481009)
chr1 (308-364)||(47820244-47820300)
chr1 (321-364)||(15034744-15034787)
chr1 (321-364)||(23536098-23536141)
chr1 (183-245)||(28632124-28632186)
chr1 (308-357)||(41822683-41822733)
chr1 (308-354)||(50471791-50471837)
chr1 (311-364)||(5474474-5474527)
chr1 (185-245)||(6470228-6470289)
chr1 (311-364)||(15034690-15034743)
chr1 (308-353)||(21267796-21267841)
chr1 (247-288)||(24273226-24273267)
chr1 (312-357)||(32128068-32128113)
chr1 (308-357)||(37447345-37447394)
chr1 (308-357)||(41822529-41822578)
chr1 (308-357)||(49216324-49216373)
chr1 (308-364)||(946406-946461)
chr1 (308-364)||(946944-947000)
chr1 (324-364)||(4038106-4038146)
chr1 (195-243)||(10166986-10167034)
chr1 (185-245)||(21267346-21267406)
chr1 (308-364)||(35491188-35491244)
chr1 (183-243)||(37036502-37036562)
chr1 (183-243)||(37446881-37446941)
chr1 (312-364)||(38277446-38277498)
chr1 (185-236)||(4663808-4663859)
chr1 (184-243)||(23969438-23969497)
chr1 (182-245)||(31166701-31166764)
chr1 (185-244)||(32128574-32128633)
chr1 (307-358)||(34003414-34003465)
chr1 (307-350)||(34003506-34003549)
chr1 (308-363)||(37036935-37036990)
chr1 (183-245)||(37447424-37447486)
chr1 (190-245)||(41822078-41822133)
chr1 (311-357)||(32572960-32573006)
chr1 (308-362)||(32647334-32647388)
chr1 (187-245)||(44571680-44571738)
chr1 (250-288)||(47165221-47165259)
chr1 (307-357)||(52135610-52135660)
chr1 (311-364)||(4038150-4038203)
chr1 (323-364)||(32287934-32287975)
chr1 (308-357)||(41823146-41823195)
chr1 (320-357)||(45565478-45565515)
chr1 (321-357)||(5474437-5474473)
chr1 (185-221)||(21088258-21088294)
chr1 (248-288)||(26501086-26501126)
chr1 (183-243)||(37447969-37448029)
chr1 (308-356)||(39887166-39887214)
chr1 (311-363)||(50005111-50005163)
[»] chr5 (77 HSPs)
chr5 (185-364)||(37722754-37722933)
chr5 (187-364)||(19533769-19533946)
chr5 (183-364)||(25935149-25935329)
chr5 (183-357)||(12064316-12064500)
chr5 (218-364)||(37145395-37145540)
chr5 (185-276)||(20320529-20320620)
chr5 (183-245)||(32249647-32249709)
chr5 (185-245)||(12480389-12480449)
chr5 (185-245)||(13390962-13391022)
chr5 (308-364)||(14834855-14834911)
chr5 (177-243)||(15270409-15270475)
chr5 (310-364)||(22303855-22303909)
chr5 (187-245)||(28489951-28490009)
chr5 (183-245)||(40089410-40089472)
chr5 (308-362)||(40090397-40090451)
chr5 (183-245)||(41761742-41761804)
chr5 (308-357)||(33146211-33146260)
chr5 (308-364)||(927333-927389)
chr5 (300-364)||(20320623-20320687)
chr5 (308-356)||(28490031-28490079)
chr5 (193-245)||(38178813-38178865)
chr5 (193-245)||(38206037-38206089)
chr5 (182-245)||(927790-927853)
chr5 (185-243)||(6771823-6771881)
chr5 (308-362)||(8255060-8255113)
chr5 (312-362)||(12479940-12479990)
chr5 (311-357)||(15270840-15270886)
chr5 (180-245)||(15579993-15580059)
chr5 (311-357)||(17542347-17542393)
chr5 (183-245)||(22304732-22304794)
chr5 (307-359)||(6772195-6772245)
chr5 (307-356)||(17492630-17492679)
chr5 (188-245)||(22304672-22304729)
chr5 (308-357)||(22305132-22305181)
chr5 (183-245)||(28490395-28490458)
chr5 (308-357)||(37241093-37241142)
chr5 (308-364)||(9894305-9894361)
chr5 (185-245)||(17541884-17541944)
chr5 (308-364)||(22766983-22767039)
chr5 (308-364)||(32250081-32250137)
chr5 (308-364)||(41762198-41762254)
chr5 (321-364)||(15373991-15374034)
chr5 (182-233)||(32317175-32317225)
chr5 (321-364)||(32390057-32390100)
chr5 (307-362)||(35379376-35379431)
chr5 (322-364)||(2721557-2721599)
chr5 (185-243)||(35111702-35111760)
chr5 (321-363)||(37241598-37241640)
chr5 (247-288)||(19533910-19533951)
chr5 (308-357)||(34105109-34105158)
chr5 (186-243)||(37091078-37091135)
chr5 (181-218)||(37145362-37145399)
chr5 (324-364)||(9764426-9764466)
chr5 (187-227)||(17492691-17492731)
chr5 (311-363)||(20523208-20523260)
chr5 (183-243)||(33995442-33995502)
chr5 (321-364)||(2316464-2316507)
chr5 (321-364)||(3563308-3563351)
chr5 (307-358)||(11601076-11601127)
chr5 (321-364)||(16515103-16515146)
chr5 (321-364)||(26281265-26281308)
chr5 (321-364)||(32470967-32471010)
chr5 (320-357)||(2550348-2550385)
chr5 (184-245)||(8255446-8255507)
chr5 (311-364)||(9764369-9764422)
chr5 (311-364)||(15374035-15374088)
chr5 (247-288)||(25935293-25935334)
chr5 (312-353)||(28489505-28489546)
chr5 (176-245)||(33146570-33146639)
chr5 (247-288)||(37145504-37145545)
chr5 (247-288)||(37722897-37722938)
chr5 (247-288)||(40090417-40090458)
chr5 (320-364)||(30519035-30519079)
chr5 (320-364)||(30559375-30559419)
chr5 (308-364)||(35111257-35111313)
chr5 (311-363)||(40809416-40809468)
chr5 (182-226)||(41789591-41789634)
[»] chr8 (62 HSPs)
chr8 (180-364)||(23011765-23011949)
chr8 (183-357)||(30444804-30444978)
chr8 (187-364)||(36103132-36103308)
chr8 (229-364)||(515449-515584)
chr8 (287-364)||(21465548-21465625)
chr8 (308-357)||(29611408-29611457)
chr8 (308-364)||(8049285-8049341)
chr8 (185-245)||(29611812-29611872)
chr8 (185-245)||(44346221-44346281)
chr8 (186-245)||(31980047-31980106)
chr8 (183-245)||(14727-14789)
chr8 (308-362)||(13144616-13144670)
chr8 (187-245)||(13145073-13145131)
chr8 (183-245)||(33376827-33376889)
chr8 (312-362)||(33986037-33986087)
chr8 (191-245)||(40733641-40733695)
chr8 (183-245)||(43185469-43185531)
chr8 (308-357)||(26520435-26520484)
chr8 (308-357)||(34008819-34008868)
chr8 (312-364)||(14269-14321)
chr8 (185-245)||(29256913-29256973)
chr8 (185-245)||(35978592-35978652)
chr8 (308-364)||(44889385-44889441)
chr8 (186-245)||(10593562-10593620)
chr8 (186-245)||(31976666-31976725)
chr8 (312-362)||(9982669-9982719)
chr8 (310-364)||(24044991-24045045)
chr8 (187-245)||(26519984-26520042)
chr8 (183-245)||(33986486-33986548)
chr8 (311-364)||(13404902-13404955)
chr8 (308-364)||(28324658-28324714)
chr8 (308-364)||(29257347-29257403)
chr8 (185-245)||(29482341-29482401)
chr8 (308-364)||(29482803-29482859)
chr8 (308-364)||(33377293-33377349)
chr8 (308-364)||(35979000-35979056)
chr8 (308-364)||(44346674-44346730)
chr8 (308-362)||(31976578-31976632)
chr8 (308-362)||(31980479-31980533)
chr8 (308-362)||(35404738-35404792)
chr8 (311-364)||(3853647-3853700)
chr8 (311-364)||(3858105-3858158)
chr8 (311-364)||(17110944-17110997)
chr8 (247-288)||(23011760-23011801)
chr8 (230-274)||(21465308-21465352)
chr8 (181-245)||(28190227-28190291)
chr8 (185-236)||(9983146-9983197)
chr8 (247-282)||(13144615-13144650)
chr8 (183-242)||(14013267-14013326)
chr8 (321-364)||(17110900-17110943)
chr8 (321-364)||(42711365-42711408)
chr8 (183-245)||(1087844-1087906)
chr8 (322-364)||(40046835-40046877)
chr8 (311-364)||(4156242-4156295)
chr8 (198-243)||(7079780-7079825)
chr8 (320-357)||(7202885-7202922)
chr8 (311-364)||(14800035-14800088)
chr8 (176-245)||(34009178-34009247)
chr8 (325-362)||(37268096-37268133)
chr8 (240-276)||(8049292-8049328)
chr8 (240-288)||(13404912-13404960)
chr8 (313-357)||(42739969-42740013)
[»] scaffold0027 (2 HSPs)
scaffold0027 (186-288)||(11276-11378)
scaffold0027 (290-364)||(10917-10991)
[»] scaffold0169 (2 HSPs)
scaffold0169 (308-363)||(4107-4162)
scaffold0169 (183-245)||(4508-4570)
[»] scaffold0039 (1 HSPs)
scaffold0039 (308-357)||(109069-109118)
[»] scaffold0318 (2 HSPs)
scaffold0318 (308-363)||(2899-2953)
scaffold0318 (185-233)||(3358-3406)
[»] scaffold0417 (1 HSPs)
scaffold0417 (188-245)||(11499-11556)
[»] scaffold0009 (1 HSPs)
scaffold0009 (321-364)||(42028-42071)
[»] scaffold0014 (1 HSPs)
scaffold0014 (308-362)||(221182-221236)
[»] scaffold1562 (1 HSPs)
scaffold1562 (324-364)||(493-533)
[»] scaffold1158 (1 HSPs)
scaffold1158 (324-364)||(2060-2100)
[»] scaffold0400 (1 HSPs)
scaffold0400 (308-364)||(4484-4540)
[»] scaffold0365 (1 HSPs)
scaffold0365 (308-364)||(5128-5184)
[»] scaffold0301 (2 HSPs)
scaffold0301 (308-364)||(7182-7238)
scaffold0301 (198-245)||(7641-7688)
[»] scaffold0129 (3 HSPs)
scaffold0129 (312-364)||(19229-19280)
scaffold0129 (204-245)||(19326-19367)
scaffold0129 (316-364)||(19779-19827)
[»] scaffold0044 (2 HSPs)
scaffold0044 (324-364)||(56305-56345)
scaffold0044 (311-364)||(56349-56402)
[»] scaffold0048 (1 HSPs)
scaffold0048 (321-364)||(82974-83017)
[»] scaffold0002 (1 HSPs)
scaffold0002 (307-361)||(130388-130442)
[»] scaffold0065 (1 HSPs)
scaffold0065 (308-353)||(9572-9617)


Alignment Details
Target: chr6 (Bit Score: 151; Significance: 8e-80; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 151; E-Value: 8e-80
Query Start/End: Original strand, 183 - 364
Target Start/End: Complemental strand, 34364956 - 34364774
Alignment:
Q  183 ttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatttatctcaaagtatttgaattccctcataacattgcattt 282  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||  ||||    
T  34364956 ttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatttacctcaaagtatttgaattccctcatagcattatattt 34364857  T
Q  283 cctcaacattacattacattcccc-catccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||    
T  34364856 cctcaacattacattacattccccacatccaaacaatggaattcacctcaaagtatttaaattccctcataacattacattcc 34364774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 185 - 364
Target Start/End: Complemental strand, 13487485 - 13487306
Alignment:
Q  185 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatttatctcaaagtatttgaattccctcataacattgcatttcc 284  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| ||| |||||||    
T  13487485 agagtgtgtttggatgaggtaatttggaaattttaaagaatttaaaattctagacaatttatctcaaagtatttgaattccctcgtaatattacatttcc 13487386  T
Q  285 tcaacattacattacattcccccatccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| ||||||||    
T  13487385 tcaacattacattacattcccccatccaaacaatgaaattcacctcaaagtatttgaattccctcataacactacattcc 13487306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 185 - 364
Target Start/End: Original strand, 29889296 - 29889476
Alignment:
Q  185 agagtgtgtttggatgaggtaatttgaaaatttt-aaagaatttaaaattctaggcaatttatctcaaagtatttgaattccctcataacattgcatttc 283  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||| | ||||||||||||||||||| |||||||||| ||||||    
T  29889296 agagtgtgtttggatgaggtaatttgaaattttttaaagaatttaaaattctaggcaattaacctcaaagtatttgaattccttcataacattacatttc 29889395  T
Q  284 ctcaacattacattacattcccccatccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
     |||| ||||||||||||||||||||||||| |||| ||||||| ||||||||||| ||||||||||||||||||||||||    
T  29889396 ttcaatattacattacattcccccatccaaataatggaattcacatcaaagtatttgaattccctcaaaacattacattcc 29889476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 185 - 364
Target Start/End: Original strand, 34244843 - 34245022
Alignment:
Q  185 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatttatctcaaagtatttgaattccctcataacattgcatttcc 284  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| |||||| |||||| ||| ||||| |    
T  34244843 agagtgtgtttggatgaggtaatttggaaattttaaagaatttaaaattctaggcaatttacctcaaagtatttaaattccttcataatattacatttac 34244942  T
Q  285 tcaacattacattacattcccccatccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    |||| ||||||||||||| |||||||||||||||| |||| || ||||||||||| ||||||||||||||||||||||||    
T  34244943 tcaatattacattacatttccccatccaaacaatggaatttacatcaaagtatttgaattccctcaaaacattacattcc 34245022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 308 - 364
Target Start/End: Complemental strand, 15832553 - 15832497
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    ||||||||||||||||||||| |||||||||| |||||||| |||||||||||||||    
T  15832553 atccaaacaatgaaattcaccccaaagtatttgaattcccttaaaacattacattcc 15832497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 308 - 364
Target Start/End: Complemental strand, 28918252 - 28918196
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    |||||||||||||||||||||||||||||||| |||| ||| |||||||||||||||    
T  28918252 atccaaacaatgaaattcacctcaaagtatttgaatttccttaaaacattacattcc 28918196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 184 - 245
Target Start/End: Complemental strand, 8475679 - 8475618
Alignment:
Q  184 tagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 245  Q
    |||||||||||| ||||||||||||   ||||||||||||||||| ||||||||||||||||    
T  8475679 tagagtgtgtttagatgaggtaattgagaaattttaaagaatttagaattctaggcaattta 8475618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 181 - 245
Target Start/End: Complemental strand, 1195857 - 1195793
Alignment:
Q  181 ctttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 245  Q
    |||||||||||||||| |||||||||||   |||||||| ||||||| |||||||||||||||||    
T  1195857 ctttagagtgtgtttgaatgaggtaattgagaaattttagagaatttgaaattctaggcaattta 1195793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 183 - 243
Target Start/End: Original strand, 15615918 - 15615978
Alignment:
Q  183 ttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatt 243  Q
    ||||||||||||||||||||||||||   |||||||||||||||||||||  |||||||||    
T  15615918 ttagagtgtgtttggatgaggtaattgataaattttaaagaatttaaaatattaggcaatt 15615978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 311 - 364
Target Start/End: Complemental strand, 9763096 - 9763043
Alignment:
Q  311 caaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    ||||||||  |||||||||||||||| || ||||||||||||||||||||||||    
T  9763096 caaacaatagaattcacctcaaagtagttgaattccctcaaaacattacattcc 9763043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 185 - 245
Target Start/End: Complemental strand, 1369025 - 1368965
Alignment:
Q  185 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 245  Q
    |||||||||||||| |||||||||   ||||| ||||||||||||||||||||| ||||||    
T  1369025 agagtgtgtttggacgaggtaattgagaaattataaagaatttaaaattctaggtaattta 1368965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 308 - 364
Target Start/End: Complemental strand, 9697549 - 9697493
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    |||||||||||| ||||||| ||||||||||| |||||| ||||||||| |||||||    
T  9697549 atccaaacaatggaattcacatcaaagtatttgaattccttcaaaacatcacattcc 9697493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 321 - 364
Target Start/End: Complemental strand, 6919782 - 6919739
Alignment:
Q  321 aattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    |||||||||||||||| || ||||||||||||||||||||||||    
T  6919782 aattcacctcaaagtagttgaattccctcaaaacattacattcc 6919739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 243
Target Start/End: Complemental strand, 10105555 - 10105497
Alignment:
Q  185 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatt 243  Q
    ||||||||||||||||||||||||   ||||||||||||||||| | || |||||||||    
T  10105555 agagtgtgtttggatgaggtaattgagaaattttaaagaatttagacttgtaggcaatt 10105497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 312 - 357
Target Start/End: Complemental strand, 1195416 - 1195371
Alignment:
Q  312 aaacaatgaaattcacctcaaagtatttaaattccctcaaaacatt 357  Q
    |||||||| ||||||||||||||||||| || ||||||||||||||    
T  1195416 aaacaatggaattcacctcaaagtatttgaaatccctcaaaacatt 1195371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 321 - 362
Target Start/End: Original strand, 6358250 - 6358291
Alignment:
Q  321 aattcacctcaaagtatttaaattccctcaaaacattacatt 362  Q
    |||||||| |||||||||||||||| ||||||||||||||||    
T  6358250 aattcaccacaaagtatttaaattctctcaaaacattacatt 6358291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 308 - 357
Target Start/End: Complemental strand, 8475248 - 8475199
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacatt 357  Q
    |||||||||||| ||||||||  ||||||||| |||||||||||||||||    
T  8475248 atccaaacaatggaattcacccaaaagtatttgaattccctcaaaacatt 8475199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 311 - 364
Target Start/End: Complemental strand, 9285731 - 9285678
Alignment:
Q  311 caaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    ||||||||  |||||| ||||||||| || ||||||||||||||||||||||||    
T  9285731 caaacaatagaattcagctcaaagtagttgaattccctcaaaacattacattcc 9285678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 313 - 362
Target Start/End: Original strand, 26901755 - 26901804
Alignment:
Q  313 aacaatgaaattcacctcaaagtatttaaattccctcaaaacattacatt 362  Q
    ||||||||||||||||| ||| ||||| ||||||||||||| ||||||||    
T  26901755 aacaatgaaattcacctaaaattatttgaattccctcaaaatattacatt 26901804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 243
Target Start/End: Original strand, 724809 - 724869
Alignment:
Q  183 ttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatt 243  Q
    ||||||||||||||||||||||||||   || |||| ||||||||| ||||||||| ||||    
T  724809 ttagagtgtgtttggatgaggtaattgagaattttttaagaatttagaattctaggtaatt 724869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 233
Target Start/End: Original strand, 6357821 - 6357873
Alignment:
Q  181 ctttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaatt 233  Q
    |||||||||||||||||| ||||||||| | ||||||| ||||||||| ||||    
T  6357821 ctttagagtgtgtttggacgaggtaattgggaaattttgaagaatttagaatt 6357873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 320 - 364
Target Start/End: Original strand, 15299509 - 15299553
Alignment:
Q  320 aaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    ||||||||||||||||| || |||||| |||||||||||||||||    
T  15299509 aaattcacctcaaagtagttgaattccttcaaaacattacattcc 15299553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 356
Target Start/End: Complemental strand, 31412988 - 31412940
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacat 356  Q
    |||||||||||| ||||||  ||||||||||| ||||||||||||||||    
T  31412988 atccaaacaatggaattcatatcaaagtatttgaattccctcaaaacat 31412940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 308 - 350
Target Start/End: Original strand, 15616347 - 15616389
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctca 350  Q
    |||||||||||  ||||||||||||| ||||||||||||||||    
T  15616347 atccaaacaatagaattcacctcaaaatatttaaattccctca 15616389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 364
Target Start/End: Original strand, 776155 - 776208
Alignment:
Q  311 caaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    ||||||||  ||||||||| |||||| || |||| |||||||||||||||||||    
T  776155 caaacaatagaattcaccttaaagtagttgaatttcctcaaaacattacattcc 776208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 288
Target Start/End: Complemental strand, 13487342 - 13487301
Alignment:
Q  247 ctcaaagtatttgaattccctcataacattgcatttcctcaa 288  Q
    |||||||||||||||||||||||||||| | |||| ||||||    
T  13487342 ctcaaagtatttgaattccctcataacactacattccctcaa 13487301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 323 - 363
Target Start/End: Complemental strand, 15299471 - 15299431
Alignment:
Q  323 ttcacctcaaagtatttaaattccctcaaaacattacattc 363  Q
    |||||||||||||| || ||||| |||||||||||||||||    
T  15299471 ttcacctcaaagtagttgaattctctcaaaacattacattc 15299431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 187 - 243
Target Start/End: Complemental strand, 31413407 - 31413351
Alignment:
Q  187 agtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatt 243  Q
    |||||||||||||| |||||||   ||||||| ||||||||| ||||||||| ||||    
T  31413407 agtgtgtttggatggggtaattgagaaattttgaagaatttagaattctagggaatt 31413351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 288
Target Start/End: Original strand, 34244987 - 34245027
Alignment:
Q  248 tcaaagtatttgaattccctcataacattgcatttcctcaa 288  Q
    |||||||||||||||||||||| |||||| |||| ||||||    
T  34244987 tcaaagtatttgaattccctcaaaacattacattccctcaa 34245027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 247 - 287
Target Start/End: Complemental strand, 34364810 - 34364770
Alignment:
Q  247 ctcaaagtatttgaattccctcataacattgcatttcctca 287  Q
    |||||||||||| ||||||||||||||||| |||| |||||    
T  34364810 ctcaaagtatttaaattccctcataacattacattccctca 34364770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 150; Significance: 3e-79; HSPs: 62)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 183 - 364
Target Start/End: Complemental strand, 10633243 - 10633063
Alignment:
Q  183 ttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatttatctcaaagtatttgaattccctcataacattgcattt 282  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| |||||    
T  10633243 ttagagtgtgtttggatgaggtaatttggaaattttaaagaatttaaaattctaggcaatttacctcaaagtatttgaattccctcataatattacattt 10633144  T
Q  283 cctcaacattacattacattcccccatccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||    
T  10633143 cctcaacattacattacatt-ccccatccaaacaatgaaattcacctcaaagtatttgaattccctcataacattacattcc 10633063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 183 - 357
Target Start/End: Original strand, 21012437 - 21012611
Alignment:
Q  183 ttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatttatctcaaagtatttgaattccctcataacattgcattt 282  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| |||||| ||||||||||||||||||||||| |||||    
T  21012437 ttagagtgtgtttggatgaggtaatttaaaaattttaaagaatttaaaattctagacaatttacctcaaaatatttgaattccctcataacattacattt 21012536  T
Q  283 cctcaacattacattacattcccccatccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacatt 357  Q
    |||||||||||||||||||||||||||| |||||||| ||||||||||||| |||||||||||||||||||||||    
T  21012537 cctcaacattacattacattcccccatctaaacaatggaattcacctcaaaatatttaaattccctcaaaacatt 21012611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 185 - 364
Target Start/End: Complemental strand, 31474059 - 31473880
Alignment:
Q  185 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatttatctcaaagtatttgaattccctcataacattgcatttcc 284  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| |||||| |||||||||||| |||||||||| |||||||    
T  31474059 agagtgtgtttggatgaggtaatttggaaattttaaagaatttaaaattctagacaatttacctcaaattatttgaattccgtcataacattacatttcc 31473960  T
Q  285 tcaacattacattacattcccccatccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    ||||||||||||||||||| | |||||||||||| |||||||||||||||||||| |||||||||| |||||||||||||    
T  31473959 tcaacattacattacattctctcatccaaacaataaaattcacctcaaagtatttgaattccctcataacattacattcc 31473880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 183 - 250
Target Start/End: Complemental strand, 3803776 - 3803709
Alignment:
Q  183 ttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatttatctca 250  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||    
T  3803776 ttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattttaggcaacttacctca 3803709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 308 - 364
Target Start/End: Complemental strand, 1539728 - 1539672
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  1539728 atccaaacaatgaaattcacctcaaagtatttgaattccctcaaaacattacattcc 1539672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 188 - 245
Target Start/End: Complemental strand, 47108765 - 47108708
Alignment:
Q  188 gtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 245  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  47108765 gtgtgtttggatgaggtaattggaaaattttaaagaatttagaattctaggcaattta 47108708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 185 - 245
Target Start/End: Original strand, 40547768 - 40547828
Alignment:
Q  185 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 245  Q
    ||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||    
T  40547768 agagtgtgtttggatgaggtaattgagaaattttaaagaatttaaaattctaggcaattta 40547828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 186 - 245
Target Start/End: Original strand, 27284221 - 27284280
Alignment:
Q  186 gagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 245  Q
    ||||||||||||||||  ||||||||||||||||||||||||| ||||||||||||||||    
T  27284221 gagtgtgtttggatgatataatttgaaaattttaaagaatttagaattctaggcaattta 27284280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 182 - 245
Target Start/End: Original strand, 46242619 - 46242682
Alignment:
Q  182 tttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 245  Q
    ||||||||||||||||||||||||||| | ||||||||||||||||| ||||||| ||||||||    
T  46242619 tttagagtgtgtttggatgaggtaattgggaaattttaaagaatttataattctaagcaattta 46242682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 185 - 243
Target Start/End: Complemental strand, 30303668 - 30303610
Alignment:
Q  185 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatt 243  Q
    |||||||||||||||||| |||||   ||||||||||||||||||||||||||||||||    
T  30303668 agagtgtgtttggatgagataattgagaaattttaaagaatttaaaattctaggcaatt 30303610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 308 - 357
Target Start/End: Complemental strand, 17727152 - 17727103
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacatt 357  Q
    |||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  17727152 atccaaacaatgaaattcacctcaaagtatttgaattcccacaaaacatt 17727103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 308 - 357
Target Start/End: Original strand, 40338238 - 40338287
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacatt 357  Q
    |||||||||||||||||||||||||||||||| |||||| ||||||||||    
T  40338238 atccaaacaatgaaattcacctcaaagtatttgaattccatcaaaacatt 40338287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 308 - 357
Target Start/End: Complemental strand, 42775692 - 42775643
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacatt 357  Q
    |||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  42775692 atccaaacaatggaattcacctcaaagtatttgaattccctcaaaacatt 42775643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 188 - 245
Target Start/End: Complemental strand, 42776630 - 42776573
Alignment:
Q  188 gtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 245  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||| ||| ||||||||    
T  42776630 gtgtgtttggatgaggtaattggaaaattttaaagaatttagaatcctaagcaattta 42776573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 308 - 357
Target Start/End: Complemental strand, 56339220 - 56339171
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacatt 357  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  56339220 atccaaacaatgaaattcacatcaaagtatttgaattccctcaaaacatt 56339171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 308 - 364
Target Start/End: Complemental strand, 2125944 - 2125888
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    |||||||||||| |||||||| |||||||||| ||||||||||||||| ||||||||    
T  2125944 atccaaacaatggaattcaccccaaagtatttgaattccctcaaaacaatacattcc 2125888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 185 - 245
Target Start/End: Complemental strand, 2126386 - 2126326
Alignment:
Q  185 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 245  Q
    |||||||||||||||| |||||||   ||||||||||||||||| ||||||||||||||||    
T  2126386 agagtgtgtttggatggggtaattgagaaattttaaagaatttagaattctaggcaattta 2126326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 308 - 364
Target Start/End: Complemental strand, 16516258 - 16516202
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    |||||||||||| | ||||| |||||||||||||||||| |||||||||||||||||    
T  16516258 atccaaacaatggagttcacatcaaagtatttaaattccttcaaaacattacattcc 16516202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 185 - 245
Target Start/End: Original strand, 19461266 - 19461326
Alignment:
Q  185 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 245  Q
    |||||||||||| ||||||||||| |||  ||||||||||||||||||| |||||||||||    
T  19461266 agagtgtgtttgaatgaggtaattagaattttttaaagaatttaaaattttaggcaattta 19461326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 308 - 364
Target Start/End: Complemental strand, 29091224 - 29091168
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    |||||||||||  ||||||| ||||||||||| ||||||||||||||||||||||||    
T  29091224 atccaaacaatagaattcacatcaaagtatttgaattccctcaaaacattacattcc 29091168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 308 - 364
Target Start/End: Complemental strand, 35470209 - 35470153
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    |||||||||||| |||||||| |||||||||| ||||||||||||||| ||||||||    
T  35470209 atccaaacaatggaattcaccccaaagtatttgaattccctcaaaacaatacattcc 35470153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 185 - 245
Target Start/End: Complemental strand, 35470672 - 35470612
Alignment:
Q  185 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 245  Q
    ||||||||||||||||| ||||||   ||||||||||||||||| ||||||||||||||||    
T  35470672 agagtgtgtttggatgatgtaattgagaaattttaaagaatttagaattctaggcaattta 35470612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 185 - 245
Target Start/End: Original strand, 42775780 - 42775840
Alignment:
Q  185 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 245  Q
    ||||||||||||||||||||||||   ||||||||||||||||| ||||||||| ||||||    
T  42775780 agagtgtgtttggatgaggtaattgagaaattttaaagaatttagaattctaggaaattta 42775840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 185 - 243
Target Start/End: Complemental strand, 21782521 - 21782463
Alignment:
Q  185 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatt 243  Q
    ||||||||||||||||||||||||   ||||||||||||||||| |||||||| |||||    
T  21782521 agagtgtgtttggatgaggtaattgtgaaattttaaagaatttagaattctagacaatt 21782463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 187 - 245
Target Start/End: Complemental strand, 31948119 - 31948061
Alignment:
Q  187 agtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 245  Q
    |||| ||||||| ||||||||| |||| ||||||||||||||||||| |||||||||||    
T  31948119 agtgcgtttggacgaggtaattggaaacttttaaagaatttaaaattttaggcaattta 31948061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 183 - 245
Target Start/End: Complemental strand, 41140022 - 41139960
Alignment:
Q  183 ttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 245  Q
    |||||||||||||||| || ||||||   ||||||||||||||||||||||||| ||||||||    
T  41140022 ttagagtgtgtttggaagaagtaattgagaaattttaaagaatttaaaattctaagcaattta 41139960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 307 - 361
Target Start/End: Complemental strand, 42776725 - 42776671
Alignment:
Q  307 catccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacat 361  Q
    ||||||||||||||||||||||| ||||||||| ||||  |||||||||||||||    
T  42776725 catccaaacaatgaaattcacctaaaagtatttgaatttactcaaaacattacat 42776671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 320 - 364
Target Start/End: Complemental strand, 14982355 - 14982311
Alignment:
Q  320 aaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    |||||||||| |||||| |||||||||||||||||||||||||||    
T  14982355 aaattcaccttaaagtagttaaattccctcaaaacattacattcc 14982311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 308 - 364
Target Start/End: Complemental strand, 26534580 - 26534524
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    |||||||||||  |||||||  |||||||||| ||||||||||||||||||||||||    
T  26534580 atccaaacaatagaattcacaacaaagtatttgaattccctcaaaacattacattcc 26534524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 321 - 364
Target Start/End: Original strand, 4896717 - 4896760
Alignment:
Q  321 aattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    |||||||||||||||| || ||||||||||||||||||||||||    
T  4896717 aattcacctcaaagtagttgaattccctcaaaacattacattcc 4896760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 312 - 363
Target Start/End: Original strand, 16300209 - 16300260
Alignment:
Q  312 aaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattc 363  Q
    |||||||| ||||||||||||||||||| ||||  |||||||||||||||||    
T  16300209 aaacaatggaattcacctcaaagtatttgaattttctcaaaacattacattc 16300260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 188 - 234
Target Start/End: Original strand, 5579654 - 5579700
Alignment:
Q  188 gtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattc 234  Q
    ||||||||| ||||||||||| ||||||||| |||||||||||||||    
T  5579654 gtgtgtttgaatgaggtaattagaaaattttgaagaatttaaaattc 5579700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 311 - 357
Target Start/End: Original strand, 27284651 - 27284697
Alignment:
Q  311 caaacaatgaaattcacctcaaagtatttaaattccctcaaaacatt 357  Q
    ||||||||||||||||||||||||||||| ||||| || ||||||||    
T  27284651 caaacaatgaaattcacctcaaagtatttgaattctcttaaaacatt 27284697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 183 - 245
Target Start/End: Original strand, 28751742 - 28751804
Alignment:
Q  183 ttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 245  Q
    |||||||||||||||||||| |||||   |||||||||| |||||| |||| |||||||||||    
T  28751742 ttagagtgtgtttggatgagataattgagaaattttaaaaaatttagaattataggcaattta 28751804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 308 - 362
Target Start/End: Complemental strand, 41139560 - 41139506
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacatt 362  Q
    |||||||||||  ||||||||| ||||||||| |||| |||||||||||||||||    
T  41139560 atccaaacaatagaattcacctaaaagtatttgaatttcctcaaaacattacatt 41139506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 311 - 364
Target Start/End: Complemental strand, 857323 - 857270
Alignment:
Q  311 caaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    ||||||||  ||||||||| |||||| || ||||||||||||||||||||||||    
T  857323 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattcc 857270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 247 - 288
Target Start/End: Complemental strand, 10633099 - 10633058
Alignment:
Q  247 ctcaaagtatttgaattccctcataacattgcatttcctcaa 288  Q
    |||||||||||||||||||||||||||||| |||| ||||||    
T  10633099 ctcaaagtatttgaattccctcataacattacattccctcaa 10633058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 311 - 364
Target Start/End: Original strand, 15660258 - 15660311
Alignment:
Q  311 caaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    ||||||||  |||||| ||||||||| || ||||||||||||||||||||||||    
T  15660258 caaacaatagaattcagctcaaagtagttgaattccctcaaaacattacattcc 15660311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 247 - 288
Target Start/End: Complemental strand, 31473916 - 31473875
Alignment:
Q  247 ctcaaagtatttgaattccctcataacattgcatttcctcaa 288  Q
    |||||||||||||||||||||||||||||| |||| ||||||    
T  31473916 ctcaaagtatttgaattccctcataacattacattccctcaa 31473875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 308 - 357
Target Start/End: Original strand, 40548204 - 40548253
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacatt 357  Q
    |||||||||||| |||||||| |||||||||| |||| ||||||||||||    
T  40548204 atccaaacaatggaattcaccccaaagtatttgaatttcctcaaaacatt 40548253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 309 - 358
Target Start/End: Original strand, 46242531 - 46242580
Alignment:
Q  309 tccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacatta 358  Q
    ||||||||||| |||||||||||||||||||  ||||| |||||||||||    
T  46242531 tccaaacaatggaattcacctcaaagtattttgattccttcaaaacatta 46242580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 311 - 363
Target Start/End: Original strand, 10128049 - 10128101
Alignment:
Q  311 caaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattc 363  Q
    ||||||||  |||||| ||||||||| || |||||||||||||||||||||||    
T  10128049 caaacaatagaattcatctcaaagtagttgaattccctcaaaacattacattc 10128101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 237
Target Start/End: Original strand, 16299781 - 16299829
Alignment:
Q  189 tgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctag 237  Q
    |||||||| ||||||||||| |||||| ||| |||||||||||||||||    
T  16299781 tgtgtttgaatgaggtaattggaaaatattagagaatttaaaattctag 16299829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 243
Target Start/End: Complemental strand, 24705880 - 24705820
Alignment:
Q  183 ttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatt 243  Q
    |||||||||||||||||| |||||||  |||||||| ||||||||| |||| |||| ||||    
T  24705880 ttagagtgtgtttggatggggtaattgaaaaattttgaagaatttagaattttagggaatt 24705820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 243
Target Start/End: Complemental strand, 54566724 - 54566664
Alignment:
Q  183 ttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatt 243  Q
    |||||||||||||||||| |||||||   ||||||||| ||||||||||||| ||| ||||    
T  54566724 ttagagtgtgtttggatggggtaattgagaaattttaatgaatttaaaattcaagggaatt 54566664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 321 - 364
Target Start/End: Original strand, 857324 - 857367
Alignment:
Q  321 aattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    |||||| ||||||||| || ||||||||||||||||||||||||    
T  857324 aattcaactcaaagtagttgaattccctcaaaacattacattcc 857367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 321 - 364
Target Start/End: Original strand, 49111397 - 49111440
Alignment:
Q  321 aattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    ||||||||||||| || || ||||||||||||||||||||||||    
T  49111397 aattcacctcaaaatagttgaattccctcaaaacattacattcc 49111440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 307 - 362
Target Start/End: Complemental strand, 52494012 - 52493958
Alignment:
Q  307 catccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacatt 362  Q
    ||||||||||| ||||||||||| ||| ||||| ||||||||| ||||||||||||    
T  52494012 catccaaacaacgaaattcacctaaaaatattttaattccctc-aaacattacatt 52493958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 186 - 245
Target Start/End: Original strand, 56118170 - 56118229
Alignment:
Q  186 gagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 245  Q
    |||||||||||||||||||||||   |||||||| |||| | | ||||||||||||||||    
T  56118170 gagtgtgtttggatgaggtaattgacaaattttagagaactcagaattctaggcaattta 56118229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 320 - 362
Target Start/End: Complemental strand, 1112680 - 1112638
Alignment:
Q  320 aaattcacctcaaagtatttaaattccctcaaaacattacatt 362  Q
    ||||||||||||||||| || ||||||||| ||||||||||||    
T  1112680 aaattcacctcaaagtagttgaattccctcgaaacattacatt 1112638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 322 - 364
Target Start/End: Complemental strand, 11041040 - 11040998
Alignment:
Q  322 attcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    ||||||||||||||| || ||||| ||||||||||||||||||    
T  11041040 attcacctcaaagtagttgaattctctcaaaacattacattcc 11040998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 16516716 - 16516666
Alignment:
Q  185 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattct 235  Q
    ||||||||||||||||||||||||   ||||||| ||||||||| ||||||    
T  16516716 agagtgtgtttggatgaggtaattgagaaattttgaagaatttagaattct 16516666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 321 - 362
Target Start/End: Original strand, 1112707 - 1112748
Alignment:
Q  321 aattcacctcaaagtatttaaattccctcaaaacattacatt 362  Q
    |||||||||||||||| || ||||||||| ||||||||||||    
T  1112707 aattcacctcaaagtagttgaattccctcgaaacattacatt 1112748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 288
Target Start/End: Complemental strand, 1539708 - 1539667
Alignment:
Q  247 ctcaaagtatttgaattccctcataacattgcatttcctcaa 288  Q
    ||||||||||||||||||||||| |||||| |||| ||||||    
T  1539708 ctcaaagtatttgaattccctcaaaacattacattccctcaa 1539667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 245
Target Start/End: Complemental strand, 26535009 - 26534976
Alignment:
Q  212 aaattttaaagaatttaaaattctaggcaattta 245  Q
    ||||||||||||||||| ||||||||||||||||    
T  26535009 aaattttaaagaatttagaattctaggcaattta 26534976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 364
Target Start/End: Complemental strand, 28845955 - 28845902
Alignment:
Q  311 caaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    ||||||||  ||||||||| |||||| || ||||||||| ||||||||||||||    
T  28845955 caaacaatagaattcaccttaaagtagttgaattccctcgaaacattacattcc 28845902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 364
Target Start/End: Complemental strand, 36455991 - 36455938
Alignment:
Q  311 caaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    ||||||||  ||||||||| |||||| || |||||||||||||||||| |||||    
T  36455991 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattagattcc 36455938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 364
Target Start/End: Complemental strand, 42844627 - 42844574
Alignment:
Q  311 caaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    ||||||||  |||||||||||||||| || |||||| |||||| ||||||||||    
T  42844627 caaacaatagaattcacctcaaagtagttgaattccttcaaaatattacattcc 42844574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 308 - 357
Target Start/End: Original strand, 52295031 - 52295080
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacatt 357  Q
    ||||||||||||||||||  |||||| ||||| ||||||||| |||||||    
T  52295031 atccaaacaatgaaattcgtctcaaaatatttgaattccctcgaaacatt 52295080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 308 - 357
Target Start/End: Original strand, 53760776 - 53760825
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacatt 357  Q
    |||||||||||  ||||||| ||||| ||||| |||||||||||||||||    
T  53760776 atccaaacaatagaattcacatcaaaatatttgaattccctcaaaacatt 53760825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 321 - 357
Target Start/End: Original strand, 26250994 - 26251030
Alignment:
Q  321 aattcacctcaaagtatttaaattccctcaaaacatt 357  Q
    |||||||||||||||| || |||||||||||||||||    
T  26250994 aattcacctcaaagtagttgaattccctcaaaacatt 26251030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 320 - 364
Target Start/End: Original strand, 41498574 - 41498618
Alignment:
Q  320 aaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    |||||||||||||| || || |||||| |||||||||||||||||    
T  41498574 aaattcacctcaaaataattgaattccttcaaaacattacattcc 41498618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 150; Significance: 3e-79; HSPs: 63)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 185 - 362
Target Start/End: Complemental strand, 8762336 - 8762159
Alignment:
Q  185 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatttatctcaaagtatttgaattccctcataacattgcatttcc 284  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |    
T  8762336 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatttatctcaaagtatttgaattccctcataacattacattttc 8762237  T
Q  285 tcaacattacattacattcccccatccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacatt 362  Q
    ||||||||||||||||||| ||||||||||||||| ||||||| ||||||||||| |||||||||| |||||||||||    
T  8762236 tcaacattacattacattctcccatccaaacaatggaattcacatcaaagtatttgaattccctcataacattacatt 8762159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 180 - 364
Target Start/End: Complemental strand, 19476031 - 19475847
Alignment:
Q  180 cctttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatttatctcaaagtatttgaattccctcataacattgca 279  Q
    |||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||    
T  19476031 ccttaagagtgtgtttggatgaggtaatttggaaattttaaagaatttaaaattctaggcaatttacctcaaagtatttgaattccctcataacattaca 19475932  T
Q  280 tttcctcaacattacattacattcccccatccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| |||| ||||| |||||||||||||    
T  19475931 tttcctcaacattacattacattctcccatccaaacaatggaattcacctcaaagtatttgaattacctcataacattacattcc 19475847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 183 - 357
Target Start/End: Original strand, 54761424 - 54761598
Alignment:
Q  183 ttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatttatctcaaagtatttgaattccctcataacattgcattt 282  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| |||||||  | |||||||||||||||| |||||||||| |||||    
T  54761424 ttagagtgtgtttggatgaggtaatttgaaaattttacagaatttaaaattttagacaatttactttaaagtatttgaattccttcataacattacattt 54761523  T
Q  283 cctcaacattacattacattcccccatccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacatt 357  Q
    |||||| |||||||||||||||| ||||||||||||| |||| || ||||||||||| |||||||||||||||||    
T  54761524 cctcaatattacattacattccctcatccaaacaatggaatttacatcaaagtatttgaattccctcaaaacatt 54761598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 182 - 313
Target Start/End: Original strand, 33871761 - 33871892
Alignment:
Q  182 tttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatttatctcaaagtatttgaattccctcataacattgcatt 281  Q
    |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||   ||    
T  33871761 tttagagtgtgtgtggatgaggtaatttggaaattttaaagaatttaaaattctaggcaatttacctcaaagtatttgaattccctcgtaacattatgtt 33871860  T
Q  282 tcctcaacattacattacattcccccatccaa 313  Q
    ||||||||||||||||||||||||||||||||    
T  33871861 tcctcaacattacattacattcccccatccaa 33871892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 183 - 357
Target Start/End: Complemental strand, 47714488 - 47714307
Alignment:
Q  183 ttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatttatctcaaagtatttgaattccctcataacattgcattt 282  Q
    |||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| ||  ||||||||||||||| |||||||||| |||||    
T  47714488 ttagagtgtgtttggatgaggtaatttggaaattttaaagaatttcaaattctaggcaatttacct--aagtatttgaattccttcataacattacattt 47714391  T
Q  283 cctca--------acattacattacattcccccatccaaacaatgaaattcacctc-aaagtatttaaattccctcaaaacatt 357  Q
    |||||        | |||||||||||||||| ||||||||||||||||||||| || ||||||||| |||||||||||||||||    
T  47714390 cctcaatattagtatattacattacattccctcatccaaacaatgaaattcacatcaaaagtatttgaattccctcaaaacatt 47714307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 308 - 364
Target Start/End: Original strand, 21307517 - 21307573
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    |||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  21307517 atccaaacaatggaattcacctcaaagtatttgaattccctcaaaacattacattcc 21307573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 189 - 245
Target Start/End: Original strand, 34396148 - 34396204
Alignment:
Q  189 tgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 245  Q
    |||||||||||||||||||| |||||||||||||| |||||||||||||||||||||    
T  34396148 tgtgtttggatgaggtaattggaaaattttaaagagtttaaaattctaggcaattta 34396204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 178 - 245
Target Start/End: Complemental strand, 7977107 - 7977040
Alignment:
Q  178 ttcctttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 245  Q
    ||||||||||||||||||||||||||||||| | ||||||||||||||||  ||| ||||||||||||    
T  7977107 ttcctttagagtgtgtttggatgaggtaattgggaaattttaaagaatttcgaatcctaggcaattta 7977040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 187 - 245
Target Start/End: Original strand, 28181800 - 28181858
Alignment:
Q  187 agtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 245  Q
    |||||||||||| ||||||||| ||||||||||||||||||| ||||||||||||||||    
T  28181800 agtgtgtttggacgaggtaattggaaaattttaaagaatttagaattctaggcaattta 28181858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 310 - 364
Target Start/End: Original strand, 42005940 - 42005994
Alignment:
Q  310 ccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  42005940 ccaaacaatgaaattcacctcaaggtatttaaattccttcaaaacattacattcc 42005994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 185 - 245
Target Start/End: Complemental strand, 48948131 - 48948071
Alignment:
Q  185 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 245  Q
    ||||| ||||||||||||||||||  |||||||||||||||||| ||||||||||||||||    
T  48948131 agagtatgtttggatgaggtaattgaaaaattttaaagaatttagaattctaggcaattta 48948071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 182 - 245
Target Start/End: Complemental strand, 21731471 - 21731408
Alignment:
Q  182 tttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 245  Q
    |||||||||||||||||||||||||||   |||||| | |||||||||||||||||||||||||    
T  21731471 tttagagtgtgtttggatgaggtaattgataaatttaagagaatttaaaattctaggcaattta 21731408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 181 - 236
Target Start/End: Complemental strand, 52527563 - 52527508
Alignment:
Q  181 ctttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattcta 236  Q
    |||||||||||||||||||||||||||| |||||||||||| |||||| |||||||    
T  52527563 ctttagagtgtgtttggatgaggtaattggaaaattttaaaaaatttagaattcta 52527508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 183 - 245
Target Start/End: Complemental strand, 34089127 - 34089065
Alignment:
Q  183 ttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 245  Q
    ||||||||||||||||||| ||||||   ||||||||||||||||| ||||||||||||||||    
T  34089127 ttagagtgtgtttggatgatgtaattgagaaattttaaagaatttagaattctaggcaattta 34089065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 310 - 364
Target Start/End: Complemental strand, 37054479 - 37054425
Alignment:
Q  310 ccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    ||||||||||||||||||||||| |||||| |||||| |||||||||||||||||    
T  37054479 ccaaacaatgaaattcacctcaaggtatttgaattccttcaaaacattacattcc 37054425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 183 - 245
Target Start/End: Original strand, 38506482 - 38506544
Alignment:
Q  183 ttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 245  Q
    |||||||||||||| |||| |||||| ||||||||||||||||||| |||| |||||||||||    
T  38506482 ttagagtgtgtttgaatgaagtaattggaaaattttaaagaatttagaattttaggcaattta 38506544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 188 - 245
Target Start/End: Original strand, 48824637 - 48824694
Alignment:
Q  188 gtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 245  Q
    |||||||||||| |||||||| ||||||||||||||||||| |||| |||||||||||    
T  48824637 gtgtgtttggataaggtaattggaaaattttaaagaatttagaattttaggcaattta 48824694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 308 - 364
Target Start/End: Complemental strand, 7976635 - 7976579
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    |||||||||||  |||||||||||| ||||||||||||| |||||||||||||||||    
T  7976635 atccaaacaatagaattcacctcaatgtatttaaattccttcaaaacattacattcc 7976579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 308 - 364
Target Start/End: Complemental strand, 30766640 - 30766584
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    |||||||||||| |||||||||||| |||||| |||||| |||||||||||||||||    
T  30766640 atccaaacaatggaattcacctcaaggtatttgaattccttcaaaacattacattcc 30766584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 185 - 245
Target Start/End: Original strand, 36397511 - 36397571
Alignment:
Q  185 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 245  Q
    ||||||||||||||||||||||||   ||||||||||||||||| |||||||| |||||||    
T  36397511 agagtgtgtttggatgaggtaattgagaaattttaaagaatttagaattctagacaattta 36397571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 308 - 364
Target Start/End: Complemental strand, 47767519 - 47767463
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    |||||||||||| |||||||||||| |||||| |||||| |||||||||||||||||    
T  47767519 atccaaacaatgtaattcacctcaaggtatttgaattccttcaaaacattacattcc 47767463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 308 - 364
Target Start/End: Original strand, 53129828 - 53129884
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    |||||||||||| |||||||| |||||||||| |||||||| |||||||||||||||    
T  53129828 atccaaacaatggaattcaccccaaagtatttgaattcccttaaaacattacattcc 53129884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 185 - 245
Target Start/End: Original strand, 53469951 - 53470011
Alignment:
Q  185 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 245  Q
    ||||||||||||||||||||||||   ||||||||||||||||| ||||||||| ||||||    
T  53469951 agagtgtgtttggatgaggtaattgagaaattttaaagaatttagaattctaggtaattta 53470011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 308 - 364
Target Start/End: Original strand, 53470414 - 53470470
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||||| || |||||    
T  53470414 atccaaacaatgaaattcaccccaaagtatttgaattccctcaaaacaatagattcc 53470470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 191 - 246
Target Start/End: Complemental strand, 28092206 - 28092152
Alignment:
Q  191 tgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatttat 246  Q
    |||||||||||| ||||| |||||||||||||||||| ||||||||||||||||||    
T  28092206 tgtttggatgagctaattggaaaattttaaagaattt-aaattctaggcaatttat 28092152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 182 - 245
Target Start/End: Original strand, 35279467 - 35279530
Alignment:
Q  182 tttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 245  Q
    |||||||||||||||||||||| |||| | ||||||||||||||||| ||||||| | ||||||    
T  35279467 tttagagtgtgtttggatgaggcaattgggaaattttaaagaatttagaattctaagtaattta 35279530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 183 - 245
Target Start/End: Original strand, 671186 - 671248
Alignment:
Q  183 ttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 245  Q
    ||||||||||||||||||||||||||   |||||||||||||| ||||||| ||| |||||||    
T  671186 ttagagtgtgtttggatgaggtaattgagaaattttaaagaatataaaattatagacaattta 671248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 183 - 245
Target Start/End: Original strand, 43863484 - 43863546
Alignment:
Q  183 ttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 245  Q
    |||||||||||||||| |||||||||   ||||||||||||||||| ||||||||| ||||||    
T  43863484 ttagagtgtgtttggacgaggtaattgagaaattttaaagaatttagaattctaggtaattta 43863546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 184 - 233
Target Start/End: Original strand, 21307110 - 21307159
Alignment:
Q  184 tagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaatt 233  Q
    ||||||||||||||||||||||||| | ||||||||||||||||| ||||    
T  21307110 tagagtgtgtttggatgaggtaattgggaaattttaaagaatttagaatt 21307159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 311 - 364
Target Start/End: Complemental strand, 31070490 - 31070437
Alignment:
Q  311 caaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    ||||||||  |||||||||||||||| || ||||||||||||||||||||||||    
T  31070490 caaacaatagaattcacctcaaagtagttgaattccctcaaaacattacattcc 31070437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 185 - 245
Target Start/End: Original strand, 24241711 - 24241771
Alignment:
Q  185 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 245  Q
    ||||||||||||||||||||||||   ||||||||||||||||| ||| |||| |||||||    
T  24241711 agagtgtgtttggatgaggtaattgagaaattttaaagaatttagaatcctagacaattta 24241771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 308 - 364
Target Start/End: Complemental strand, 34088658 - 34088602
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    |||| ||||||| |||||||| |||||||||| ||||||||||||||| ||||||||    
T  34088658 atcctaacaatggaattcaccccaaagtatttgaattccctcaaaacaatacattcc 34088602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 308 - 364
Target Start/End: Original strand, 36397974 - 36398030
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    |||| ||||||| |||||||| |||||||||| ||||||||||||||| ||||||||    
T  36397974 atccgaacaatggaattcaccccaaagtatttgaattccctcaaaacaatacattcc 36398030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 308 - 364
Target Start/End: Complemental strand, 48947692 - 48947636
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    |||||||||||| |||||||| |||||||||| ||||| ||||||||| ||||||||    
T  48947692 atccaaacaatggaattcaccccaaagtatttgaattctctcaaaacaatacattcc 48947636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 191 - 234
Target Start/End: Original strand, 645741 - 645784
Alignment:
Q  191 tgtttggatgaggtaatttgaaaattttaaagaatttaaaattc 234  Q
    |||||||||||||||||| ||||||||||||||||||| |||||    
T  645741 tgtttggatgaggtaattggaaaattttaaagaatttagaattc 645784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 308 - 363
Target Start/End: Complemental strand, 7302433 - 7302378
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattc 363  Q
    |||||||||||| |||||||||||| |||| | |||||| ||||||||||||||||    
T  7302433 atccaaacaatggaattcacctcaaggtatctgaattccttcaaaacattacattc 7302378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 321 - 364
Target Start/End: Original strand, 9129429 - 9129472
Alignment:
Q  321 aattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    |||||||||||||||| || ||||||||||||||||||||||||    
T  9129429 aattcacctcaaagtagttgaattccctcaaaacattacattcc 9129472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 321 - 364
Target Start/End: Original strand, 9137536 - 9137579
Alignment:
Q  321 aattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    |||||||||||||||| || ||||||||||||||||||||||||    
T  9137536 aattcacctcaaagtagttgaattccctcaaaacattacattcc 9137579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 321 - 364
Target Start/End: Original strand, 27251979 - 27252022
Alignment:
Q  321 aattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    |||||||||||||||| || ||||||||||||||||||||||||    
T  27251979 aattcacctcaaagtagttgaattccctcaaaacattacattcc 27252022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 321 - 364
Target Start/End: Original strand, 44692907 - 44692950
Alignment:
Q  321 aattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    |||||||||||||||| || ||||||||||||||||||||||||    
T  44692907 aattcacctcaaagtagttgaattccctcaaaacattacattcc 44692950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 321 - 364
Target Start/End: Original strand, 46672801 - 46672844
Alignment:
Q  321 aattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    |||||||||||||||| || ||||||||||||||||||||||||    
T  46672801 aattcacctcaaagtagttgaattccctcaaaacattacattcc 46672844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 308 - 364
Target Start/End: Complemental strand, 46706739 - 46706681
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtattta--aattccctcaaaacattacattcc 364  Q
    |||||||||||| ||||||||||||||||||||  ||||| ||| ||||||||||||||    
T  46706739 atccaaacaatggaattcacctcaaagtatttaagaattctctcgaaacattacattcc 46706681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 310 - 364
Target Start/End: Original strand, 671606 - 671660
Alignment:
Q  310 ccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    |||||||||| |||||||| |||||||| | ||||||||||||||| ||||||||    
T  671606 ccaaacaatggaattcaccccaaagtatctgaattccctcaaaacaatacattcc 671660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 311 - 357
Target Start/End: Original strand, 38506864 - 38506910
Alignment:
Q  311 caaacaatgaaattcacctcaaagtatttaaattccctcaaaacatt 357  Q
    ||||||||| ||||||||||||| ||||| |||||||||||||||||    
T  38506864 caaacaatggaattcacctcaaattatttgaattccctcaaaacatt 38506910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 308 - 357
Target Start/End: Original strand, 9007440 - 9007489
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacatt 357  Q
    |||||||||||||||||||||| ||||||||| |||||  ||||||||||    
T  9007440 atccaaacaatgaaattcacctaaaagtatttgaattcgttcaaaacatt 9007489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 309 - 350
Target Start/End: Original strand, 28182234 - 28182275
Alignment:
Q  309 tccaaacaatgaaattcacctcaaagtatttaaattccctca 350  Q
    |||||||||| |||||||||||||||||||| ||||||||||    
T  28182234 tccaaacaataaaattcacctcaaagtatttgaattccctca 28182275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 321 - 362
Target Start/End: Original strand, 44436343 - 44436384
Alignment:
Q  321 aattcacctcaaagtatttaaattccctcaaaacattacatt 362  Q
    |||||||||||||||| || ||||||||||||||||||||||    
T  44436343 aattcacctcaaagtagttgaattccctcaaaacattacatt 44436384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 245
Target Start/End: Complemental strand, 19475776 - 19475736
Alignment:
Q  205 aatttgaaaattttaaagaatttaaaattctaggcaattta 245  Q
    |||||| |||||||||||||||||||||||||||| |||||    
T  19475776 aatttggaaattttaaagaatttaaaattctaggctattta 19475736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 310 - 362
Target Start/End: Original strand, 31189384 - 31189436
Alignment:
Q  310 ccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacatt 362  Q
    |||||| || ||||| |||||||||||||| ||||| ||||||||||||||||    
T  31189384 ccaaacgataaaatttacctcaaagtatttgaattctctcaaaacattacatt 31189436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 245
Target Start/End: Original strand, 50168191 - 50168251
Alignment:
Q  185 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 245  Q
    ||||||||||||||||||||||||   ||||||||||||||  | |||||| |||||||||    
T  50168191 agagtgtgtttggatgaggtaattgagaaattttaaagaatcgagaattcttggcaattta 50168251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 182 - 245
Target Start/End: Complemental strand, 2105282 - 2105219
Alignment:
Q  182 tttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 245  Q
    |||||||||||||||||||  ||||||   ||||||| ||||||||| ||||||||| ||||||    
T  2105282 tttagagtgtgtttggatggagtaattgagaaattttgaagaatttataattctaggtaattta 2105219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 307 - 362
Target Start/End: Complemental strand, 47336969 - 47336914
Alignment:
Q  307 catccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacatt 362  Q
    ||||||||||||| ||||||||| ||  ||||||||||  ||||||||||||||||    
T  47336969 catccaaacaatggaattcacctaaacatatttaaattatctcaaaacattacatt 47336914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 361
Target Start/End: Original strand, 13176546 - 13176600
Alignment:
Q  307 catccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacat 361  Q
    ||||||||||||  ||| ||||| ||||| ||| |||||||||||||||||||||    
T  13176546 catccaaacaatagaatccacctaaaagtctttgaattccctcaaaacattacat 13176600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 311 - 361
Target Start/End: Complemental strand, 21730985 - 21730936
Alignment:
Q  311 caaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacat 361  Q
    |||||||||||||||| |||||| ||||| |||||| ||||||||||||||    
T  21730985 caaacaatgaaattcatctcaaa-tatttgaattccttcaaaacattacat 21730936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 308 - 357
Target Start/End: Complemental strand, 2104821 - 2104772
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacatt 357  Q
    |||||||||||  ||||||| ||||||||||| ||||||||| |||||||    
T  2104821 atccaaacaatagaattcacatcaaagtatttgaattccctcgaaacatt 2104772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 288
Target Start/End: Complemental strand, 19475883 - 19475842
Alignment:
Q  247 ctcaaagtatttgaattccctcataacattgcatttcctcaa 288  Q
    ||||||||||||||||| |||||||||||| |||| ||||||    
T  19475883 ctcaaagtatttgaattacctcataacattacattccctcaa 19475842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 308 - 357
Target Start/End: Complemental strand, 26323443 - 26323394
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacatt 357  Q
    |||||||||| | ||||||||| ||||||||| |||| ||||||||||||    
T  26323443 atccaaacaacggaattcacctaaaagtatttgaattacctcaaaacatt 26323394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 321 - 362
Target Start/End: Complemental strand, 28092288 - 28092247
Alignment:
Q  321 aattcacctcaaagtatttaaattccctcaaaacattacatt 362  Q
    |||||||||||||||| || |||||||||||||||| |||||    
T  28092288 aattcacctcaaagtaattgaattccctcaaaacatcacatt 28092247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 307 - 348
Target Start/End: Original strand, 34396491 - 34396532
Alignment:
Q  307 catccaaacaatgaaattcacctcaaagtatttaaattccct 348  Q
    |||||||| ||||||||| |||||||||||||| ||||||||    
T  34396491 catccaaagaatgaaatttacctcaaagtatttgaattccct 34396532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 321 - 357
Target Start/End: Complemental strand, 332048 - 332012
Alignment:
Q  321 aattcacctcaaagtatttaaattccctcaaaacatt 357  Q
    |||||||||||||||| || |||||||||||||||||    
T  332048 aattcacctcaaagtagttgaattccctcaaaacatt 332012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 324 - 364
Target Start/End: Complemental strand, 5415854 - 5415814
Alignment:
Q  324 tcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    |||||| |||||| || ||||||||||||||||||||||||    
T  5415854 tcaccttaaagtagttgaattccctcaaaacattacattcc 5415814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 288
Target Start/End: Original strand, 31189395 - 31189443
Alignment:
Q  240 aatttatctcaaagtatttgaattccctcataacattgcatttcctcaa 288  Q
    |||||| |||||||||||||||||| |||| |||||| |||| ||||||    
T  31189395 aatttacctcaaagtatttgaattctctcaaaacattacattacctcaa 31189443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 352
Target Start/End: Original strand, 43863936 - 43863979
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaa 352  Q
    |||||||||||| |||||||| |||||||||| ||||||||||||    
T  43863936 atccaaacaatggaattcacc-caaagtatttgaattccctcaaa 43863979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 148; Significance: 5e-78; HSPs: 73)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 185 - 364
Target Start/End: Original strand, 26161987 - 26162165
Alignment:
Q  185 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatttatctcaaagtatttgaattccctcataacattgcatttcc 284  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||    
T  26161987 agagtgtgtttggatgaggtaatttggaaattttaaagaatttaaaattctaggcaatt-atctcaaagtatttgaattccctcataacattacatttcc 26162085  T
Q  285 tcaacattacattacattcccccatccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    | ||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| |||||||||||||    
T  26162086 ttaacattacattacattcccccatccaaacaatggaattcacctcaaagtatttgaattccctcataacattacattcc 26162165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 178 - 364
Target Start/End: Original strand, 29639056 - 29639243
Alignment:
Q  178 ttcctttagagtgtgtttggatgaggtaatttgaaaattttaaagaattta-aaattctaggcaatttatctcaaagtatttgaattccctcataacatt 276  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| |||||||||||||||||| |||||||||||    
T  29639056 ttcccttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttttaaattctaggcaatttacctcaaagtatttgaattctctcataacatt 29639155  T
Q  277 gcatttcctcaacattacattacattcccccatccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
     |||||||||||||||||||||||||| | ||||||||||||| ||||||||||||| ||||| |||| ||||| |||||||||||||    
T  29639156 acatttcctcaacattacattacattctcacatccaaacaatggaattcacctcaaaatatttgaatttcctcataacattacattcc 29639243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 185 - 364
Target Start/End: Original strand, 6498614 - 6498793
Alignment:
Q  185 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatttatctcaaagtatttgaattccctcataacattgcatttcc 284  Q
    |||||||||||||||||||||||||| ||||||||||   ||||||||||||||||||||| ||||||||||||||||||| |||||||||| |||||||    
T  6498614 agagtgtgtttggatgaggtaatttggaaattttaaattctttaaaattctaggcaatttacctcaaagtatttgaattccttcataacattacatttcc 6498713  T
Q  285 tcaacattacattacattcccccatccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    |||| |||||||||||||||| |||||||||||||  |||||| ||||||||||| ||||||||||||||||||||||||    
T  6498714 tcaatattacattacattcccacatccaaacaatggtattcacatcaaagtatttgaattccctcaaaacattacattcc 6498793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 186 - 364
Target Start/End: Complemental strand, 31632928 - 31632753
Alignment:
Q  186 gagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatttatctcaaagtatttgaattccctcataacattgcatttcct 285  Q
    |||||||||||||| |||||||||||||||||  |||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| ||||||||    
T  31632928 gagtgtgtttggataaggtaatttgaaaattt--aagaatttaaaattctagacaatttacctcaaagtatttgaattccctcataacattacatttcct 31632831  T
Q  286 caacattacattacattcccccatccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    ||||||||||||||||| |||||| ||||||||| ||||||||||||||||||| |||||||||| |||||||||||||    
T  31632830 caacattacattacatt-ccccattcaaacaatggaattcacctcaaagtatttgaattccctcataacattacattcc 31632753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 285 - 364
Target Start/End: Original strand, 35776904 - 35776983
Alignment:
Q  285 tcaacattacattacattcccccatccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    ||||||||||||||||||||| |||||||| |||| ||||||||||||||||||| |||||||||| |||||||||||||    
T  35776904 tcaacattacattacattccctcatccaaataatggaattcacctcaaagtatttgaattccctcataacattacattcc 35776983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 183 - 245
Target Start/End: Original strand, 14602769 - 14602831
Alignment:
Q  183 ttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 245  Q
    ||||||||||||||||||||||||||  |||||||||||||||||| ||||||||||||||||    
T  14602769 ttagagtgtgtttggatgaggtaattgaaaaattttaaagaatttagaattctaggcaattta 14602831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 185 - 245
Target Start/End: Complemental strand, 14790617 - 14790557
Alignment:
Q  185 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 245  Q
    |||||||||||||||||||||||| ||||||||||||||||||| ||| ||||||||||||    
T  14790617 agagtgtgtttggatgaggtaattggaaaattttaaagaatttagaatcctaggcaattta 14790557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 308 - 364
Target Start/End: Original strand, 22391559 - 22391615
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  22391559 atccaaacaatgaaattcacctcaaaatatttaaattctctcaaaacattacattcc 22391615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 185 - 245
Target Start/End: Complemental strand, 43791571 - 43791511
Alignment:
Q  185 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 245  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||||| |||||||||    
T  43791571 agagtgtgtttggatgaggtaattggaaaattttaaagaatttagaattcttggcaattta 43791511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 183 - 245
Target Start/End: Original strand, 39342158 - 39342220
Alignment:
Q  183 ttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 245  Q
    ||||||||||||||||||||||||||   ||||||||||||||||| ||||||||||||||||    
T  39342158 ttagagtgtgtttggatgaggtaattgagaaattttaaagaatttagaattctaggcaattta 39342220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 180 - 245
Target Start/End: Complemental strand, 35456359 - 35456294
Alignment:
Q  180 cctttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 245  Q
    |||| ||||||||||||||||||||||||  ||| |||||||||||||| ||||||||||||||||    
T  35456359 ccttaagagtgtgtttggatgaggtaattgaaaatttttaaagaatttagaattctaggcaattta 35456294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 308 - 364
Target Start/End: Complemental strand, 30524342 - 30524286
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    ||||||||||||||||||| | |||||||||| ||||||||||||||||||||||||    
T  30524342 atccaaacaatgaaattcatcccaaagtatttgaattccctcaaaacattacattcc 30524286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 187 - 243
Target Start/End: Complemental strand, 38320825 - 38320770
Alignment:
Q  187 agtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatt 243  Q
    |||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||    
T  38320825 agtgtgtttggatgtggtaatt-gaaaattttaaagaatttaaaattctaggcaatt 38320770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 308 - 364
Target Start/End: Complemental strand, 43791177 - 43791121
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    |||||||||||| | ||||||||||||||||| ||||||||||||||||||||||||    
T  43791177 atccaaacaatggagttcacctcaaagtatttgaattccctcaaaacattacattcc 43791121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 307 - 362
Target Start/End: Original strand, 25189197 - 25189252
Alignment:
Q  307 catccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacatt 362  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||||    
T  25189197 catccaaacaatgaaattcacttcaaagtatttgaattccctcaaaacattgcatt 25189252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 183 - 245
Target Start/End: Complemental strand, 2411863 - 2411801
Alignment:
Q  183 ttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 245  Q
    |||||| |||||||||||||||||||   ||||||||||||||||| ||||||||||||||||    
T  2411863 ttagagagtgtttggatgaggtaattgagaaattttaaagaatttagaattctaggcaattta 2411801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 183 - 245
Target Start/End: Complemental strand, 40496270 - 40496208
Alignment:
Q  183 ttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 245  Q
    ||||||| ||||||||||||||||||   ||||||||||||||||| ||||||||||||||||    
T  40496270 ttagagtatgtttggatgaggtaattaagaaattttaaagaatttataattctaggcaattta 40496208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 308 - 357
Target Start/End: Complemental strand, 32650660 - 32650611
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacatt 357  Q
    ||||||||||| |||||||||||||||||||| |||||||||||||||||    
T  32650660 atccaaacaataaaattcacctcaaagtatttgaattccctcaaaacatt 32650611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 308 - 357
Target Start/End: Complemental strand, 40667428 - 40667379
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacatt 357  Q
    ||||||||||||||||||| | ||||||||||||||||||||||||||||    
T  40667428 atccaaacaatgaaattcatcccaaagtatttaaattccctcaaaacatt 40667379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 308 - 364
Target Start/End: Original strand, 23455219 - 23455275
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    |||||||||||| |||||||| |||||||||| ||||||||||||||| ||||||||    
T  23455219 atccaaacaatggaattcaccccaaagtatttgaattccctcaaaacaatacattcc 23455275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 185 - 245
Target Start/End: Original strand, 23548119 - 23548179
Alignment:
Q  185 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 245  Q
    ||||||||||||||||||||||||   ||||||||||||||||| ||||||||| ||||||    
T  23548119 agagtgtgtttggatgaggtaattgagaaattttaaagaatttagaattctaggaaattta 23548179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 185 - 245
Target Start/End: Original strand, 28538677 - 28538737
Alignment:
Q  185 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 245  Q
    ||||||||||||||||||||||||   ||||||||||||||||| |||| |||||||||||    
T  28538677 agagtgtgtttggatgaggtaattgagaaattttaaagaatttagaattttaggcaattta 28538737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 308 - 364
Target Start/End: Original strand, 28539140 - 28539196
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    |||||||||||| |||||||| |||||||||| ||||||||||||||| ||||||||    
T  28539140 atccaaacaatggaattcaccccaaagtatttgaattccctcaaaacaatacattcc 28539196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 308 - 364
Target Start/End: Complemental strand, 30629144 - 30629088
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    ||||||||||||||||||||| |||||||||||||||| || |||||| ||||||||    
T  30629144 atccaaacaatgaaattcaccccaaagtatttaaattctcttaaaacaatacattcc 30629088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 185 - 245
Target Start/End: Original strand, 36328328 - 36328388
Alignment:
Q  185 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 245  Q
    ||||||||||||||||||||||||   |||||||||| |||||| ||||||||||||||||    
T  36328328 agagtgtgtttggatgaggtaattgagaaattttaaaaaatttagaattctaggcaattta 36328388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 185 - 245
Target Start/End: Complemental strand, 42817072 - 42817012
Alignment:
Q  185 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 245  Q
    |||||||||| |||||||||||||   ||||||||||||||||| ||||||||||||||||    
T  42817072 agagtgtgttaggatgaggtaattgagaaattttaaagaatttagaattctaggcaattta 42817012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 182 - 245
Target Start/End: Original strand, 30587427 - 30587490
Alignment:
Q  182 tttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 245  Q
    |||| ||| |||||||| ||||||||| |||||||||| |||||||| ||||||||||||||||    
T  30587427 tttatagtatgtttggacgaggtaattggaaaattttagagaatttagaattctaggcaattta 30587490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 307 - 357
Target Start/End: Original strand, 30080772 - 30080822
Alignment:
Q  307 catccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacatt 357  Q
    ||||||||||||| ||||||||| |||||||||||||| ||||||||||||    
T  30080772 catccaaacaatggaattcacctgaaagtatttaaatttcctcaaaacatt 30080822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 185 - 243
Target Start/End: Original strand, 37460470 - 37460528
Alignment:
Q  185 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatt 243  Q
    ||||||| ||||||||||||||||  ||| ||||||||||||||||||||||| |||||    
T  37460470 agagtgtatttggatgaggtaattgaaaatttttaaagaatttaaaattctagacaatt 37460528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 185 - 243
Target Start/End: Original strand, 45181757 - 45181814
Alignment:
Q  185 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatt 243  Q
    |||||||||||||||||||||| |||||||||||| ||| |||| ||||||||||||||    
T  45181757 agagtgtgtttggatgaggtaa-ttgaaaattttagagagtttagaattctaggcaatt 45181814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 311 - 364
Target Start/End: Complemental strand, 5644761 - 5644708
Alignment:
Q  311 caaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    ||||||||  |||||||||||||||| || ||||||||||||||||||||||||    
T  5644761 caaacaatagaattcacctcaaagtagttgaattccctcaaaacattacattcc 5644708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 308 - 357
Target Start/End: Complemental strand, 14790200 - 14790151
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacatt 357  Q
    ||||||| ||| |||||||||||||||||||| |||||||||||||||||    
T  14790200 atccaaataataaaattcacctcaaagtatttgaattccctcaaaacatt 14790151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 312 - 357
Target Start/End: Original strand, 19865530 - 19865575
Alignment:
Q  312 aaacaatgaaattcacctcaaagtatttaaattccctcaaaacatt 357  Q
    |||||||||||||||||||||||||||| |||| ||||||||||||    
T  19865530 aaacaatgaaattcacctcaaagtatttgaatttcctcaaaacatt 19865575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 311 - 364
Target Start/End: Complemental strand, 29065903 - 29065850
Alignment:
Q  311 caaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    ||||||||  |||||||||||||||| || ||||||||||||||||||||||||    
T  29065903 caaacaatagaattcacctcaaagtagttgaattccctcaaaacattacattcc 29065850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 311 - 364
Target Start/End: Complemental strand, 46069475 - 46069422
Alignment:
Q  311 caaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    ||||||||  |||||||||||||||| || ||||||||||||||||||||||||    
T  46069475 caaacaatagaattcacctcaaagtagttgaattccctcaaaacattacattcc 46069422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 308 - 364
Target Start/End: Original strand, 9784903 - 9784959
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    |||||||||||| | |||||| |||||||||| ||||||||||||||| ||||||||    
T  9784903 atccaaacaatggatttcaccccaaagtatttgaattccctcaaaacaatacattcc 9784959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 308 - 364
Target Start/End: Original strand, 23548583 - 23548639
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    |||||||||||| |||||||| |||||||||| |||| |||||||||| ||||||||    
T  23548583 atccaaacaatggaattcaccccaaagtatttgaatttcctcaaaacaatacattcc 23548639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 185 - 233
Target Start/End: Complemental strand, 35488761 - 35488714
Alignment:
Q  185 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaatt 233  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  35488761 agagtgtgtttggatgatgtaatt-gaaaattttaaagaatttaaaatt 35488714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 308 - 364
Target Start/End: Original strand, 39342614 - 39342670
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    |||||||||||| |||||||| |||||||||| |||||||| |||||| ||||||||    
T  39342614 atccaaacaatggaattcaccccaaagtatttgaattcccttaaaacaatacattcc 39342670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 185 - 245
Target Start/End: Complemental strand, 45984883 - 45984823
Alignment:
Q  185 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 245  Q
    |||||||||||||||| ||||||    ||||||||||||||||| ||||||||||||||||    
T  45984883 agagtgtgtttggatggggtaatagagaaattttaaagaatttagaattctaggcaattta 45984823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 185 - 245
Target Start/End: Complemental strand, 45989243 - 45989183
Alignment:
Q  185 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 245  Q
    |||||||||||||||| ||||||    ||||||||||||||||| ||||||||||||||||    
T  45989243 agagtgtgtttggatggggtaatagagaaattttaaagaatttagaattctaggcaattta 45989183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 308 - 363
Target Start/End: Original strand, 18789218 - 18789273
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattc 363  Q
    |||||||||||| ||||||||| ||||||||| |||||||||| ||||||| ||||    
T  18789218 atccaaacaatggaattcaccttaaagtatttgaattccctcataacattatattc 18789273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 312 - 363
Target Start/End: Complemental strand, 18789600 - 18789549
Alignment:
Q  312 aaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattc 363  Q
    |||||||| ||||||||||||||||||| |||||||||  ||||||||||||    
T  18789600 aaacaatggaattcacctcaaagtatttgaattccctcgtaacattacattc 18789549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 321 - 364
Target Start/End: Original strand, 40110823 - 40110866
Alignment:
Q  321 aattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    |||||||||||||||| || ||||||||||||||||||||||||    
T  40110823 aattcacctcaaagtagttgaattccctcaaaacattacattcc 40110866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 308 - 357
Target Start/End: Original strand, 13814966 - 13815015
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacatt 357  Q
    ||||||| |||| ||||||| ||||||||||| |||||||||||||||||    
T  13814966 atccaaataatggaattcacatcaaagtatttgaattccctcaaaacatt 13815015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 311 - 364
Target Start/End: Original strand, 21635960 - 21636013
Alignment:
Q  311 caaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    ||||||||  |||||| ||||||||| ||||||||| |||||||||||||||||    
T  21635960 caaacaatagaattcatctcaaagtagttaaattccttcaaaacattacattcc 21636013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 247 - 288
Target Start/End: Original strand, 26162129 - 26162170
Alignment:
Q  247 ctcaaagtatttgaattccctcataacattgcatttcctcaa 288  Q
    |||||||||||||||||||||||||||||| |||| ||||||    
T  26162129 ctcaaagtatttgaattccctcataacattacattccctcaa 26162170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 308 - 357
Target Start/End: Original strand, 30587875 - 30587924
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacatt 357  Q
    |||||||||||| ||||||| | ||||||||| |||||||||||||||||    
T  30587875 atccaaacaatggaattcacattaaagtatttgaattccctcaaaacatt 30587924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 247 - 288
Target Start/End: Complemental strand, 31632789 - 31632748
Alignment:
Q  247 ctcaaagtatttgaattccctcataacattgcatttcctcaa 288  Q
    |||||||||||||||||||||||||||||| |||| ||||||    
T  31632789 ctcaaagtatttgaattccctcataacattacattccctcaa 31632748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 247 - 288
Target Start/End: Original strand, 35776947 - 35776988
Alignment:
Q  247 ctcaaagtatttgaattccctcataacattgcatttcctcaa 288  Q
    |||||||||||||||||||||||||||||| |||| ||||||    
T  35776947 ctcaaagtatttgaattccctcataacattacattccctcaa 35776988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 308 - 357
Target Start/End: Complemental strand, 40495804 - 40495755
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacatt 357  Q
    |||||||||||| |||||||| |||| ||||| |||||||||||||||||    
T  40495804 atccaaacaatggaattcaccccaaaatatttgaattccctcaaaacatt 40495755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 308 - 357
Target Start/End: Complemental strand, 45984427 - 45984378
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacatt 357  Q
    |||||||||||  ||||||||||||||||||| |||||||| ||||||||    
T  45984427 atccaaacaattgaattcacctcaaagtatttgaattcccttaaaacatt 45984378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 308 - 357
Target Start/End: Complemental strand, 45988787 - 45988738
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacatt 357  Q
    |||||||||||  ||||||||||||||||||| |||||||| ||||||||    
T  45988787 atccaaacaattgaattcacctcaaagtatttgaattcccttaaaacatt 45988738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 311 - 364
Target Start/End: Original strand, 49052860 - 49052913
Alignment:
Q  311 caaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    ||||||||  ||||||||| |||||| || ||||||||||||||||||||||||    
T  49052860 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattcc 49052913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 364
Target Start/End: Original strand, 14603234 - 14603290
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    |||||||||||| |||| ||| |||||||||| |||||||| |||||| ||||||||    
T  14603234 atccaaacaatggaatttaccccaaagtatttgaattcccttaaaacaatacattcc 14603290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 288
Target Start/End: Original strand, 25189219 - 25189259
Alignment:
Q  248 tcaaagtatttgaattccctcataacattgcatttcctcaa 288  Q
    |||||||||||||||||||||| ||||||||||| ||||||    
T  25189219 tcaaagtatttgaattccctcaaaacattgcattacctcaa 25189259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 245
Target Start/End: Complemental strand, 32651073 - 32651013
Alignment:
Q  185 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 245  Q
    |||||| ||||||||||||||||| | |||| |||||||||| | ||| ||||||||||||    
T  32651073 agagtgagtttggatgaggtaattgggaaatcttaaagaattcagaatcctaggcaattta 32651013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 364
Target Start/End: Complemental strand, 35455891 - 35455835
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    |||||||||||| |||| ||| |||||||||| |||||||| |||||| ||||||||    
T  35455891 atccaaacaatggaatttaccccaaagtatttgaattcccttaaaacaatacattcc 35455835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 312 - 364
Target Start/End: Complemental strand, 40110820 - 40110768
Alignment:
Q  312 aaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    |||||||  ||||||||| |||||| || ||||||||||||||||||||||||    
T  40110820 aaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattcc 40110768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 324 - 363
Target Start/End: Complemental strand, 2057466 - 2057427
Alignment:
Q  324 tcacctcaaagtatttaaattccctcaaaacattacattc 363  Q
    ||||||||||||| || |||||||||||||||||||||||    
T  2057466 tcacctcaaagtagttgaattccctcaaaacattacattc 2057427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 307 - 362
Target Start/End: Complemental strand, 15990979 - 15990924
Alignment:
Q  307 catccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacatt 362  Q
    ||||||||||||| |||| | |||||||||||| |||||| |||| ||||||||||    
T  15990979 catccaaacaatgcaatttatctcaaagtatttgaattccttcaagacattacatt 15990924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 184 - 243
Target Start/End: Complemental strand, 40495750 - 40495691
Alignment:
Q  184 tagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatt 243  Q
    |||||||||||||||||||||||||   ||||||| ||||||||| |||| |||| ||||    
T  40495750 tagagtgtgtttggatgaggtaattgagaaattttgaagaatttagaattatagggaatt 40495691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 308 - 347
Target Start/End: Complemental strand, 42816636 - 42816597
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccc 347  Q
    |||||||||||| |||||||| ||||||||||||||||||    
T  42816636 atccaaacaatggaattcaccccaaagtatttaaattccc 42816597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 242
Target Start/End: Complemental strand, 1580439 - 1580381
Alignment:
Q  185 agagtgtgt-ttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaat 242  Q
    ||||||||| |||||||||||||||  ||  ||||||||||||||||||| ||||||||    
T  1580439 agagtgtgtgttggatgaggtaattgaaattttttaaagaatttaaaattttaggcaat 1580381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 308 - 358
Target Start/End: Original strand, 3905631 - 3905681
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacatta 358  Q
    |||||||||||  ||||||||||||||||||| |||||| | |||||||||    
T  3905631 atccaaacaatagaattcacctcaaagtatttgaattccttgaaaacatta 3905681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 288
Target Start/End: Complemental strand, 15990967 - 15990917
Alignment:
Q  238 gcaatttatctcaaagtatttgaattccctcataacattgcatttcctcaa 288  Q
    |||||||||||||||||||||||||||| |||  ||||| |||| ||||||    
T  15990967 gcaatttatctcaaagtatttgaattccttcaagacattacattacctcaa 15990917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 247 - 289
Target Start/End: Complemental strand, 43791157 - 43791115
Alignment:
Q  247 ctcaaagtatttgaattccctcataacattgcatttcctcaac 289  Q
    ||||||||||||||||||||||| |||||| |||| |||||||    
T  43791157 ctcaaagtatttgaattccctcaaaacattacattccctcaac 43791115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 364
Target Start/End: Original strand, 2057470 - 2057523
Alignment:
Q  311 caaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    |||||||| ||||||||||  ||||| || ||||||||||||||||||| ||||    
T  2057470 caaacaataaaattcaccttgaagtagttgaattccctcaaaacattactttcc 2057523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 308 - 345
Target Start/End: Complemental strand, 26416040 - 26416003
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattc 345  Q
    |||||||| ||||||||||||||||||||||| |||||    
T  26416040 atccaaaccatgaaattcacctcaaagtatttgaattc 26416003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 242
Target Start/End: Complemental strand, 26416469 - 26416413
Alignment:
Q  185 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaat 242  Q
    |||||||||||| |||||||||||   ||||||| ||||||||| |||||||||||||    
T  26416469 agagtgtgtttg-atgaggtaattgagaaattttgaagaatttagaattctaggcaat 26416413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 288
Target Start/End: Original strand, 6498758 - 6498798
Alignment:
Q  248 tcaaagtatttgaattccctcataacattgcatttcctcaa 288  Q
    |||||||||||||||||||||| |||||| |||| ||||||    
T  6498758 tcaaagtatttgaattccctcaaaacattacattccctcaa 6498798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 189 - 245
Target Start/End: Original strand, 30080312 - 30080368
Alignment:
Q  189 tgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 245  Q
    ||||||| ||||||||||||   ||||||| ||||||||| ||||||| ||||||||    
T  30080312 tgtgttttgatgaggtaattgagaaattttgaagaatttagaattctaagcaattta 30080368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 324 - 364
Target Start/End: Original strand, 34388353 - 34388393
Alignment:
Q  324 tcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    ||||||||||||| || ||||||||||||| ||||||||||    
T  34388353 tcacctcaaagtagttgaattccctcaaaatattacattcc 34388393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 147; Significance: 2e-77; HSPs: 70)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 178 - 364
Target Start/End: Complemental strand, 10480336 - 10480150
Alignment:
Q  178 ttcctttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatttatctcaaagtatttgaattccctcataacattg 277  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||| ||||     
T  10480336 ttcctttagagtgtgcttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatttacctcaaagtatttgaattctctcatagcatta 10480237  T
Q  278 catttcctcaacattacattacattcccccatccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    |||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| |||||||||  |||||||||||||    
T  10480236 catttcctcaacattacattacattctcccatccaaacaatggaattcacctcaaagtatttgaattccctcgtaacattacattcc 10480150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 182 - 364
Target Start/End: Original strand, 11532111 - 11532295
Alignment:
Q  182 tttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatttatctcaaagtatttgaattccctcataacattgcatt 281  Q
    |||||| |||||||||||||| ||||||| || ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  11532111 tttagaatgtgtttggatgagataatttggaagttttaaagaatttaaaattctaggcaatttacctcaaagtatttgaattccctcataacattacatt 11532210  T
Q  282 tcctcaaca--ttacattacattcccccatccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    |||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  11532211 tcctcaacattttacattacattcccccatccaaacaatggaattcacctcaaagtatttgaattccctcaaaacattacattcc 11532295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 185 - 364
Target Start/End: Complemental strand, 11794105 - 11793926
Alignment:
Q  185 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatttatctcaaagtatttgaattccctcataacattgcatttcc 284  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| ||||||||||| ||||| |    
T  11794105 agagtgtgtttggattaggtaatttgaaaattttaaagaatttaaaattctagacaatttacctcaaagtatttgaattctctcataacattacattttc 11794006  T
Q  285 tcaacattacattacattcccccatccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    ||||||||||||||||||  ||||||||||||||| ||||||||||||||||||| |||||||||| |||||||||||||    
T  11794005 tcaacattacattacattatcccatccaaacaatggaattcacctcaaagtatttgaattccctcataacattacattcc 11793926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 182 - 357
Target Start/End: Complemental strand, 7684657 - 7684482
Alignment:
Q  182 tttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatttatctcaaagtatttgaattccctcataacattgcatt 281  Q
    |||||||||||||||||| ||||||||| ||||||||||||||||||||||| ||||| |||||  |||||||||||||||||  |||||||||| ||||    
T  7684657 tttagagtgtgtttggataaggtaatttaaaaattttaaagaatttaaaattttaggccatttacttcaaagtatttgaattctttcataacattacatt 7684558  T
Q  282 tcctcaacattacattacattcccccatccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacatt 357  Q
    ||||||| ||||||||||||||||||||| |||||||| |||||||  |||||||||| ||||||||| |||||||    
T  7684557 tcctcaatattacattacattcccccatctaaacaatggaattcacaccaaagtatttgaattccctccaaacatt 7684482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 308 - 357
Target Start/End: Original strand, 32840178 - 32840227
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacatt 357  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32840178 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacatt 32840227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 182 - 245
Target Start/End: Complemental strand, 769584 - 769521
Alignment:
Q  182 tttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 245  Q
    |||||||||||||||||||||||||||   ||||||||||||||||| ||||||||||||||||    
T  769584 tttagagtgtgtttggatgaggtaattgagaaattttaaagaatttagaattctaggcaattta 769521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 183 - 245
Target Start/End: Original strand, 1583330 - 1583392
Alignment:
Q  183 ttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 245  Q
    ||||||||||||||||||||||||||   ||||||||||||||||| ||||||||||||||||    
T  1583330 ttagagtgtgtttggatgaggtaattgagaaattttaaagaatttagaattctaggcaattta 1583392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 183 - 245
Target Start/End: Complemental strand, 2925202 - 2925140
Alignment:
Q  183 ttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 245  Q
    ||||||||||||||||||| |||||| | ||||||||||||||||| ||||||||||||||||    
T  2925202 ttagagtgtgtttggatgaagtaattgggaaattttaaagaatttagaattctaggcaattta 2925140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 310 - 364
Target Start/End: Original strand, 7167655 - 7167709
Alignment:
Q  310 ccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    |||||||||||||||||||||||||||||| |||||| |||||||||||||||||    
T  7167655 ccaaacaatgaaattcacctcaaagtatttgaattccttcaaaacattacattcc 7167709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 183 - 245
Target Start/End: Original strand, 33188787 - 33188849
Alignment:
Q  183 ttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 245  Q
    ||||||||||||||||||||||||||   ||||||||||||||||| ||||||||||||||||    
T  33188787 ttagagtgtgtttggatgaggtaattgagaaattttaaagaatttagaattctaggcaattta 33188849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 183 - 245
Target Start/End: Complemental strand, 39630777 - 39630715
Alignment:
Q  183 ttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 245  Q
    ||||||||||||||||||||||||||   |||||||||| |||||||||||||||||||||||    
T  39630777 ttagagtgtgtttggatgaggtaattgagaaattttaaaaaatttaaaattctaggcaattta 39630715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 185 - 245
Target Start/End: Complemental strand, 8736561 - 8736501
Alignment:
Q  185 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 245  Q
    ||||||| |||||||||||| |||||||||||||||||||||||||||||||  |||||||    
T  8736561 agagtgtatttggatgaggttatttgaaaattttaaagaatttaaaattctacccaattta 8736501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 308 - 364
Target Start/End: Complemental strand, 30698368 - 30698312
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    ||||||||||||||||||||||||| |||||| |||||| |||||||||||||||||    
T  30698368 atccaaacaatgaaattcacctcaaggtatttgaattccttcaaaacattacattcc 30698312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 308 - 364
Target Start/End: Original strand, 32839634 - 32839690
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    |||||||||||| ||||||| ||||||||||| ||||||||||||||||||||||||    
T  32839634 atccaaacaatggaattcacgtcaaagtatttgaattccctcaaaacattacattcc 32839690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 185 - 245
Target Start/End: Original strand, 35047201 - 35047261
Alignment:
Q  185 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 245  Q
    |||||||||||||||| |||||||   ||||||||||||||||||||||||||||||||||    
T  35047201 agagtgtgtttggatggggtaattgagaaattttaaagaatttaaaattctaggcaattta 35047261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 182 - 245
Target Start/End: Complemental strand, 3092798 - 3092735
Alignment:
Q  182 tttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 245  Q
    |||||||||||||||||||||||||||   ||||||||||||||||| ||||||||| ||||||    
T  3092798 tttagagtgtgtttggatgaggtaattgagaaattttaaagaatttagaattctaggaaattta 3092735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 308 - 363
Target Start/End: Original strand, 7227998 - 7228053
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattc 363  Q
    ||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||    
T  7227998 atccaaacaatgaaatttacctcaaggtatttaaattccttcaaaacattacattc 7228053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 183 - 245
Target Start/End: Original strand, 7309434 - 7309496
Alignment:
Q  183 ttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 245  Q
    ||||||||||||||||||||||||||   ||||||||||||||||| ||||||| ||||||||    
T  7309434 ttagagtgtgtttggatgaggtaattgagaaattttaaagaatttagaattctaagcaattta 7309496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 179 - 245
Target Start/End: Original strand, 19231011 - 19231076
Alignment:
Q  179 tcctttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 245  Q
    ||||||||||||||||||||||||||||||   ||||||||||||| ||| ||||||||||||||||    
T  19231011 tcctttagagtgtgtttggatgaggtaattgagaaattttaaagaa-ttagaattctaggcaattta 19231076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 187 - 245
Target Start/End: Complemental strand, 21504997 - 21504939
Alignment:
Q  187 agtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 245  Q
    |||||||||||||||||||||| | ||||||||||||||||| ||||||| ||||||||    
T  21504997 agtgtgtttggatgaggtaattgggaaattttaaagaatttagaattctaagcaattta 21504939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 185 - 243
Target Start/End: Original strand, 32839188 - 32839246
Alignment:
Q  185 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatt 243  Q
    ||||||||||| ||||||||||||   ||||||||||||||||||||||||||||||||    
T  32839188 agagtgtgtttagatgaggtaattgagaaattttaaagaatttaaaattctaggcaatt 32839246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 308 - 353
Target Start/End: Complemental strand, 1730140 - 1730095
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaa 353  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||    
T  1730140 atccaaacaatgaaattcatctcaaagtatttaaattccctcaaaa 1730095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 308 - 357
Target Start/End: Original strand, 8736427 - 8736476
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacatt 357  Q
    |||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  8736427 atccaaacaatggaattcacctcaaagtatttgaattccctcaaaacatt 8736476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 188 - 245
Target Start/End: Original strand, 19193746 - 19193803
Alignment:
Q  188 gtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 245  Q
    ||||||||||||||||||||| |||||||||||| || |||||||| |||||||||||    
T  19193746 gtgtgtttggatgaggtaattggaaaattttaaaaaaattaaaattttaggcaattta 19193803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 184 - 245
Target Start/End: Complemental strand, 44256184 - 44256123
Alignment:
Q  184 tagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 245  Q
    |||||| ||||||||||||||||||   ||||||||||||||||| ||||||||||||||||    
T  44256184 tagagtatgtttggatgaggtaattgagaaattttaaagaatttagaattctaggcaattta 44256123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 185 - 245
Target Start/End: Original strand, 8735965 - 8736025
Alignment:
Q  185 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 245  Q
    |||||||||||||||||||||||| | ||||||||||||||||| ||| ||| ||||||||    
T  8735965 agagtgtgtttggatgaggtaattgggaaattttaaagaatttagaatcctaagcaattta 8736025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 308 - 364
Target Start/End: Complemental strand, 13017866 - 13017810
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    |||||||||||| ||||||||||||||||||| |||||||| |||| ||||||||||    
T  13017866 atccaaacaatggaattcacctcaaagtatttgaattcccttaaaatattacattcc 13017810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 185 - 245
Target Start/End: Complemental strand, 13018294 - 13018234
Alignment:
Q  185 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 245  Q
    ||||||||||||||||||||||||   ||||| ||||||||||||||||||||| ||||||    
T  13018294 agagtgtgtttggatgaggtaattgagaaattataaagaatttaaaattctaggtaattta 13018234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 177 - 233
Target Start/End: Complemental strand, 17906199 - 17906143
Alignment:
Q  177 attcctttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaatt 233  Q
    ||||| ||||||||||||||||||||||||||  |||||| ||||||||||||||||    
T  17906199 attcccttagagtgtgtttggatgaggtaattgaaaaattataaagaatttaaaatt 17906143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 312 - 359
Target Start/End: Complemental strand, 11607304 - 11607257
Alignment:
Q  312 aaacaatgaaattcacctcaaagtatttaaattccctcaaaacattac 359  Q
    |||||||| ||||||||||||||||||| |||||||||||||||||||    
T  11607304 aaacaatggaattcacctcaaagtatttgaattccctcaaaacattac 11607257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 185 - 243
Target Start/End: Original strand, 14306364 - 14306422
Alignment:
Q  185 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatt 243  Q
    ||||||||||||||||||||||||   ||||||||||||||||| |||||||| |||||    
T  14306364 agagtgtgtttggatgaggtaattgagaaattttaaagaatttagaattctagacaatt 14306422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 307 - 357
Target Start/End: Complemental strand, 20935794 - 20935744
Alignment:
Q  307 catccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacatt 357  Q
    ||||||||||||| ||||||| ||||||||||| |||||||||||||||||    
T  20935794 catccaaacaatggaattcacatcaaagtatttgaattccctcaaaacatt 20935744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 181 - 243
Target Start/End: Original strand, 31703919 - 31703981
Alignment:
Q  181 ctttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatt 243  Q
    |||||||||||||||| ||||||||||| |||||||||| | |||||| |||||||| |||||    
T  31703919 ctttagagtgtgtttgaatgaggtaattggaaaattttagataatttagaattctagtcaatt 31703981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 307 - 364
Target Start/End: Complemental strand, 28740684 - 28740627
Alignment:
Q  307 catccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    |||| |||||||| |||| || ||||||||||| ||||||||||||||||||||||||    
T  28740684 catctaaacaatggaatttacatcaaagtatttgaattccctcaaaacattacattcc 28740627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 308 - 364
Target Start/End: Complemental strand, 769123 - 769067
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    |||||||||||| |||||||| |||||||||| |||||||| |||||| ||||||||    
T  769123 atccaaacaatggaattcaccccaaagtatttgaattcccttaaaacaatacattcc 769067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 308 - 364
Target Start/End: Original strand, 1583795 - 1583851
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    |||||||||||| |||||||| |||||||||| |||||||| |||||| ||||||||    
T  1583795 atccaaacaatggaattcaccccaaagtatttgaattcccttaaaacaatacattcc 1583851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 308 - 364
Target Start/End: Complemental strand, 11141392 - 11141336
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    |||||||||||| |||||||| |||||||||| |||||||| |||||| ||||||||    
T  11141392 atccaaacaatgtaattcaccccaaagtatttgaattcccttaaaacaatacattcc 11141336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 308 - 364
Target Start/End: Complemental strand, 11594895 - 11594839
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    ||||||||||| ||||||||||||||||||||  ||||| |||||| ||||||||||    
T  11594895 atccaaacaattaaattcacctcaaagtatttgtattccttcaaaatattacattcc 11594839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 311 - 363
Target Start/End: Complemental strand, 27033574 - 27033522
Alignment:
Q  311 caaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattc 363  Q
    ||||||||  |||||||||||||||| || |||||||||||||||||||||||    
T  27033574 caaacaatagaattcacctcaaagtagttgaattccctcaaaacattacattc 27033522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 308 - 364
Target Start/End: Original strand, 33189243 - 33189299
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    |||||||||||| |||||||| |||||||||| |||||||| |||||| ||||||||    
T  33189243 atccaaacaatggaattcaccccaaagtatttgaattcccttaaaacaatacattcc 33189299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 308 - 364
Target Start/End: Original strand, 45094457 - 45094513
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    |||||||||||| ||||||| | |||||| ||||||||||||||||||||| |||||    
T  45094457 atccaaacaatggaattcactttaaagtagttaaattccctcaaaacattatattcc 45094513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 182 - 245
Target Start/End: Complemental strand, 11141857 - 11141794
Alignment:
Q  182 tttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 245  Q
    |||| ||||||||||||||||||||||   ||||||||||||||||| ||| |||| |||||||    
T  11141857 tttaaagtgtgtttggatgaggtaattgagaaattttaaagaatttagaatcctagacaattta 11141794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 312 - 359
Target Start/End: Complemental strand, 11595402 - 11595355
Alignment:
Q  312 aaacaatgaaattcacctcaaagtatttaaattccctcaaaacattac 359  Q
    |||||||| ||||||||||||| ||||| |||||||||||||||||||    
T  11595402 aaacaatggaattcacctcaaaatatttgaattccctcaaaacattac 11595355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 321 - 364
Target Start/End: Complemental strand, 11716482 - 11716439
Alignment:
Q  321 aattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    |||||||||||||||| || ||||||||||||||||||||||||    
T  11716482 aattcacctcaaagtagttgaattccctcaaaacattacattcc 11716439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 321 - 364
Target Start/End: Complemental strand, 14365774 - 14365731
Alignment:
Q  321 aattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    |||||||||||||||| || ||||||||||||||||||||||||    
T  14365774 aattcacctcaaagtagttgaattccctcaaaacattacattcc 14365731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 311 - 358
Target Start/End: Complemental strand, 40026148 - 40026101
Alignment:
Q  311 caaacaatgaaattcacctcaaagtatttaaattccctcaaaacatta 358  Q
    ||||||||  |||||||||||||||||||||||| |||||||||||||    
T  40026148 caaacaatagaattcacctcaaagtatttaaatttcctcaaaacatta 40026101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 183 - 245
Target Start/End: Complemental strand, 19072382 - 19072320
Alignment:
Q  183 ttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 245  Q
    |||||||||||||||||||| |||||   ||||||||||||||||| ||| ||||| ||||||    
T  19072382 ttagagtgtgtttggatgagataattgagaaattttaaagaatttagaatcctaggtaattta 19072320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 183 - 245
Target Start/End: Original strand, 41585192 - 41585254
Alignment:
Q  183 ttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 245  Q
    ||||||||| ||||||||||||||||   ||||||||||||||||| |||||| | |||||||    
T  41585192 ttagagtgtctttggatgaggtaattgataaattttaaagaatttagaattcttgacaattta 41585254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 311 - 364
Target Start/End: Original strand, 784868 - 784921
Alignment:
Q  311 caaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    ||||||||  ||||||||| |||||| || ||||||||||||||||||||||||    
T  784868 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattcc 784921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 247 - 288
Target Start/End: Complemental strand, 11793962 - 11793921
Alignment:
Q  247 ctcaaagtatttgaattccctcataacattgcatttcctcaa 288  Q
    |||||||||||||||||||||||||||||| |||| ||||||    
T  11793962 ctcaaagtatttgaattccctcataacattacattccctcaa 11793921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 311 - 364
Target Start/End: Original strand, 41461590 - 41461643
Alignment:
Q  311 caaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    ||||||||  ||||||||||||| || || ||||||||||||||||||||||||    
T  41461590 caaacaatagaattcacctcaaaatagttgaattccctcaaaacattacattcc 41461643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 308 - 357
Target Start/End: Original strand, 41585676 - 41585725
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacatt 357  Q
    ||||||||||| || ||||| ||||||||||| |||||||||||||||||    
T  41585676 atccaaacaataaatttcacttcaaagtatttgaattccctcaaaacatt 41585725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 364
Target Start/End: Complemental strand, 3092369 - 3092313
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    |||||||||||| |||| ||| |||||||||| |||| |||||||||| ||||||||    
T  3092369 atccaaacaatggaatttaccccaaagtatttgaatttcctcaaaacaatacattcc 3092313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 243
Target Start/End: Original strand, 7611413 - 7611477
Alignment:
Q  179 tcctttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatt 243  Q
    ||||||| ||||||||||||||  ||||||   ||||||| ||||||||||||||||||| ||||    
T  7611413 tcctttaaagtgtgtttggatggagtaattgagaaattttgaagaatttaaaattctaggtaatt 7611477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 364
Target Start/End: Complemental strand, 11606800 - 11606744
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    ||||||||||| ||||||||||||||||||||  ||||| | |||| ||||||||||    
T  11606800 atccaaacaattaaattcacctcaaagtatttgtattccttgaaaatattacattcc 11606744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 321 - 364
Target Start/End: Complemental strand, 784867 - 784824
Alignment:
Q  321 aattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    |||||| ||||||||| ||||||||| |||||||||||||||||    
T  784867 aattcaactcaaagtagttaaattccttcaaaacattacattcc 784824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 321 - 364
Target Start/End: Complemental strand, 14537273 - 14537230
Alignment:
Q  321 aattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    |||||||||||||||| || |||| |||||||||||||||||||    
T  14537273 aattcacctcaaagtagttgaattacctcaaaacattacattcc 14537230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 308 - 350
Target Start/End: Original strand, 7611874 - 7611916
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctca 350  Q
    |||||||||||| ||||||| ||||||||||| ||||||||||    
T  7611874 atccaaacaatggaattcacatcaaagtatttgaattccctca 7611916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 312 - 362
Target Start/End: Original strand, 14954343 - 14954393
Alignment:
Q  312 aaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacatt 362  Q
    |||||||  ||||||||| |||||| || ||||||||||||||||||||||    
T  14954343 aaacaatagaattcaccttaaagtagttgaattccctcaaaacattacatt 14954393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 311 - 357
Target Start/End: Complemental strand, 21504534 - 21504488
Alignment:
Q  311 caaacaatgaaattcacctcaaagtatttaaattccctcaaaacatt 357  Q
    ||||||||| |||||| |||||| ||||| |||||||||||||||||    
T  21504534 caaacaatggaattcatctcaaaatatttgaattccctcaaaacatt 21504488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 28021706 - 28021756
Alignment:
Q  185 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattct 235  Q
    |||||||||||||||||| |||||   ||||||||||||||||| ||||||    
T  28021706 agagtgtgtttggatgagctaattgagaaattttaaagaatttagaattct 28021756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 105
Target Start/End: Original strand, 4746680 - 4746766
Alignment:
Q  15 atgaaggggacaagggaatagtaatagaaacaaaggtagttagcaagtatcctaagcctttaaattttatgtgatgtttctaaggaaaccc 105  Q
    |||||||||| || |||| |||||||||||||| ||||||| ||    ||||||| ||||| ||  ||| |||| ||||||||||||||||    
T  4746680 atgaaggggaaaacggaagagtaatagaaacaacggtagttggc----atcctaaacctttcaacattacgtgaagtttctaaggaaaccc 4746766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 240
Target Start/End: Original strand, 6996371 - 6996420
Alignment:
Q  191 tgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggca 240  Q
    |||||||||||||||||| |||| |||  ||||||||| |||||||||||    
T  6996371 tgtttggatgaggtaattagaaattttgtaagaatttagaattctaggca 6996420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 364
Target Start/End: Complemental strand, 10244261 - 10244208
Alignment:
Q  311 caaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    |||||||| ||||||||||  ||||| || ||||||||||||||||||| ||||    
T  10244261 caaacaataaaattcaccttgaagtagttgaattccctcaaaacattactttcc 10244208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 288
Target Start/End: Complemental strand, 10480186 - 10480145
Alignment:
Q  247 ctcaaagtatttgaattccctcataacattgcatttcctcaa 288  Q
    |||||||||||||||||||||| ||||||| |||| ||||||    
T  10480186 ctcaaagtatttgaattccctcgtaacattacattccctcaa 10480145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 308 - 353
Target Start/End: Complemental strand, 12263513 - 12263468
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaa 353  Q
    ||||||||||||||||||| |||||| ||||| ||||| |||||||    
T  12263513 atccaaacaatgaaattcaactcaaaatatttgaattctctcaaaa 12263468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 325 - 362
Target Start/End: Complemental strand, 41461585 - 41461548
Alignment:
Q  325 cacctcaaagtatttaaattccctcaaaacattacatt 362  Q
    ||||||||| || |||||||||||||||||||||||||    
T  41461585 cacctcaaaataattaaattccctcaaaacattacatt 41461548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 321 - 357
Target Start/End: Original strand, 11684675 - 11684711
Alignment:
Q  321 aattcacctcaaagtatttaaattccctcaaaacatt 357  Q
    |||||||||||||||| || |||||||||||||||||    
T  11684675 aattcacctcaaagtagttgaattccctcaaaacatt 11684711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 288
Target Start/End: Complemental strand, 28740662 - 28740622
Alignment:
Q  248 tcaaagtatttgaattccctcataacattgcatttcctcaa 288  Q
    |||||||||||||||||||||| |||||| |||| ||||||    
T  28740662 tcaaagtatttgaattccctcaaaacattacattccctcaa 28740622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 364
Target Start/End: Complemental strand, 39630311 - 39630256
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    |||||||||||  ||||| ||||||| ||||| ||||||||||||||| ||||||||    
T  39630311 atccaaacaatagaattcccctcaaa-tatttgaattccctcaaaacaatacattcc 39630256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 147; Significance: 2e-77; HSPs: 72)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 182 - 364
Target Start/End: Original strand, 47541848 - 47542030
Alignment:
Q  182 tttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatttatctcaaagtatttgaattccctcataacattgcatt 281  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| ||| ||||    
T  47541848 tttagagtgtgtttggatgaggtaatttagaaattttaaagaatttaaaattctaggcaatttacctcaaagtatttgaattccctcgtaatattacatt 47541947  T
Q  282 tcctcaacattacattacattcccccatccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| |||||||||||||    
T  47541948 tcctcaacattacattacattcccccattcaaacaatgaaattcacctcaaagtatttaaattctctcataacattacattcc 47542030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 15 - 185
Target Start/End: Original strand, 1389345 - 1389515
Alignment:
Q  15 atgaaggggacaagggaatagtaatagaaacaaaggtagttagcaagtatcctaagcctttaaattttatgtgatgtttctaaggaaaccctactataat 114  Q
    |||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1389345 atgaagggaacaagggaatagtaatagaaacaaaggtagttagcaagcatcctaagcctttaaattttatgtgatgtttctaaggaaaccctactataat 1389444  T
Q  115 attaataatnnnnnnngagcaaactacacttcatataacaattgaatctgatgatagtaataattccttta 185  Q
    |||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1389445 attaataataaaaaaagagcaaactacacttcatataacaattgaatctgatgatagtaataattccttta 1389515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 185 - 364
Target Start/End: Original strand, 24273084 - 24273262
Alignment:
Q  185 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatttatctcaaagtatttgaattccctcataacattgcatttcc 284  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| ||||||| |||||||    
T  24273084 agagtgtgtttggatgaggtaatttggaaattttaaagaatttaaaattctacgcaatt-atctcaaagtatttgaattccctcgtaacattacatttcc 24273182  T
Q  285 tcaacattacattacattcccccatccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    | ||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| |||||||||||||    
T  24273183 ttaacattacattacattcccccatccaaacaatggaattcacctcaaagtatttgaattccctcataacattacattcc 24273262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 190 - 364
Target Start/End: Original strand, 26500947 - 26501121
Alignment:
Q  190 gtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatttatctcaaagtatttgaattccctcataacattgcatttcctcaac 289  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| |||||| ||| |||||| ||||     
T  26500947 gtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggtaatttacctcaaagtatttgaattccttcataatattacatttcatcaat 26501046  T
Q  290 attacattacattcccccatccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    |||||||||||||||||||||||||||||| ||||||| ||||||||||| ||||||||||||||||||||||||    
T  26501047 attacattacattcccccatccaaacaatggaattcacatcaaagtatttgaattccctcaaaacattacattcc 26501121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 187 - 362
Target Start/End: Original strand, 47165077 - 47165252
Alignment:
Q  187 agtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatttatctcaaagtatttgaattccctcataacattgcatttcctc 286  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| ||||||||||||||||||| ||||||||||  |||||||     
T  47165077 agtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattttaggtaatttacctcaaagtatttgaattccttcataacattatatttcctt 47165176  T
Q  287 aacattacattacattcccccatccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacatt 362  Q
    || |||||||||||| |||  |||||||||||| ||||||||| ||||||||| ||||||||||||||||||||||    
T  47165177 aatattacattacatccccatatccaaacaatggaattcaccttaaagtatttgaattccctcaaaacattacatt 47165252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 308 - 363
Target Start/End: Original strand, 37448387 - 37448442
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattc 363  Q
    |||||||||||| ||||||| |||||||||||||||||||||||||||||||||||    
T  37448387 atccaaacaatggaattcacatcaaagtatttaaattccctcaaaacattacattc 37448442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 307 - 364
Target Start/End: Complemental strand, 8224856 - 8224799
Alignment:
Q  307 catccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    ||||||||||||| ||||||| ||||||||||| ||||||||||||||||||||||||    
T  8224856 catccaaacaatggaattcacatcaaagtatttcaattccctcaaaacattacattcc 8224799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 185 - 245
Target Start/End: Complemental strand, 946929 - 946869
Alignment:
Q  185 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 245  Q
    ||||||||||||||||||||||||   ||||||||||||||||| ||||||||||||||||    
T  946929 agagtgtgtttggatgaggtaattgagaaattttaaagaatttagaattctaggcaattta 946869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 185 - 245
Target Start/End: Original strand, 15467486 - 15467546
Alignment:
Q  185 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 245  Q
    ||||||||||||||||||||||||   ||||||||||||||||| ||||||||||||||||    
T  15467486 agagtgtgtttggatgaggtaattaagaaattttaaagaatttagaattctaggcaattta 15467546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 185 - 237
Target Start/End: Complemental strand, 35499598 - 35499546
Alignment:
Q  185 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctag 237  Q
    ||||||||||||||||| |||||||||||||||||||||||||| ||||||||    
T  35499598 agagtgtgtttggatgaagtaatttgaaaattttaaagaatttagaattctag 35499546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 308 - 364
Target Start/End: Complemental strand, 49659303 - 49659247
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    |||||||||||| |||||||||||||||||||||||||||||  |||||||||||||    
T  49659303 atccaaacaatggaattcacctcaaagtatttaaattccctcgtaacattacattcc 49659247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 311 - 364
Target Start/End: Original strand, 43622967 - 43623020
Alignment:
Q  311 caaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    |||| |||||||||||||||||||||||||||||  ||||||||||||||||||    
T  43622967 caaataatgaaattcacctcaaagtatttaaattttctcaaaacattacattcc 43623020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 185 - 245
Target Start/End: Complemental strand, 220702 - 220642
Alignment:
Q  185 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 245  Q
    ||||||||||||||||||||||||  |||||| || |||||||| ||||||||||||||||    
T  220702 agagtgtgtttggatgaggtaattgaaaaattatagagaatttagaattctaggcaattta 220642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 183 - 243
Target Start/End: Original strand, 12293020 - 12293080
Alignment:
Q  183 ttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatt 243  Q
    |||||||||||||||||||||||||| | |||| | |||||||||| ||||||||||||||    
T  12293020 ttagagtgtgtttggatgaggtaattgggaaatctcaaagaatttagaattctaggcaatt 12293080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 308 - 364
Target Start/End: Original strand, 37447888 - 37447944
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    |||||||||||| |||||||||||| |||||| |||||| |||||||||||||||||    
T  37447888 atccaaacaatggaattcacctcaaggtatttgaattccttcaaaacattacattcc 37447944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 308 - 364
Target Start/End: Complemental strand, 44570765 - 44570709
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    |||||||||||| |||||||||||| |||||| |||||| |||||||||||||||||    
T  44570765 atccaaacaatggaattcacctcaaggtatttgaattccttcaaaacattacattcc 44570709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 311 - 364
Target Start/End: Complemental strand, 31195540 - 31195487
Alignment:
Q  311 caaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    ||||||||| ||||||||||||| |||||||||| ||||| |||||||||||||    
T  31195540 caaacaatggaattcacctcaaaatatttaaatttcctcagaacattacattcc 31195487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 311 - 364
Target Start/End: Complemental strand, 34756511 - 34756458
Alignment:
Q  311 caaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    ||||||||  |||||||||||||||| || ||||||||||||||||||||||||    
T  34756511 caaacaatagaattcacctcaaagtagttgaattccctcaaaacattacattcc 34756458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 308 - 357
Target Start/End: Complemental strand, 42230807 - 42230758
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacatt 357  Q
    |||||||||||||||||||| ||||| |||||||||| ||||||||||||    
T  42230807 atccaaacaatgaaattcacttcaaaatatttaaattacctcaaaacatt 42230758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 308 - 357
Target Start/End: Complemental strand, 44571288 - 44571239
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacatt 357  Q
    |||||||||||| ||||||| ||||||||||| |||||||||||||||||    
T  44571288 atccaaacaatggaattcacttcaaagtatttgaattccctcaaaacatt 44571239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 311 - 363
Target Start/End: Original strand, 6470675 - 6470727
Alignment:
Q  311 caaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattc 363  Q
    ||||||||| ||| |||||||||| |||| |||||||||||||||||||||||    
T  6470675 caaacaatggaatccacctcaaagaatttgaattccctcaaaacattacattc 6470727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 308 - 364
Target Start/End: Original strand, 15467949 - 15468005
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    |||||||||||| |||||||| |||||||||| |||||||| |||||| ||||||||    
T  15467949 atccaaacaatggaattcaccccaaagtatttgaattcccttaaaacaatacattcc 15468005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 308 - 364
Target Start/End: Original strand, 28632572 - 28632627
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    |||||||||||| |||||||||||||||| || ||||| ||||||||||||||||||    
T  28632572 atccaaacaatggaattcacctcaaagta-ttgaattctctcaaaacattacattcc 28632627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 180 - 240
Target Start/End: Original strand, 41480949 - 41481009
Alignment:
Q  180 cctttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggca 240  Q
    |||| ||||||||||||||||||||||||| ||  |||||||| |||||||||| ||||||    
T  41480949 ccttaagagtgtgtttggatgaggtaatttaaattttttaaagcatttaaaattttaggca 41481009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 308 - 364
Target Start/End: Complemental strand, 47820300 - 47820244
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    |||||||||||||||||||||  ||||||||| |||||||| |||||| ||||||||    
T  47820300 atccaaacaatgaaattcaccctaaagtatttgaattcccttaaaacaatacattcc 47820244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 321 - 364
Target Start/End: Original strand, 15034744 - 15034787
Alignment:
Q  321 aattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    |||||||||||||||| || ||||||||||||||||||||||||    
T  15034744 aattcacctcaaagtagttgaattccctcaaaacattacattcc 15034787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 321 - 364
Target Start/End: Complemental strand, 23536141 - 23536098
Alignment:
Q  321 aattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    |||||||||||||||| || ||||||||||||||||||||||||    
T  23536141 aattcacctcaaagtagttgaattccctcaaaacattacattcc 23536098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 183 - 245
Target Start/End: Original strand, 28632124 - 28632186
Alignment:
Q  183 ttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 245  Q
    |||||||||||||||||||| |||||   ||||| |||| |||||| ||||||||||||||||    
T  28632124 ttagagtgtgtttggatgagataattgagaaattataaaaaatttagaattctaggcaattta 28632186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 308 - 357
Target Start/End: Original strand, 41822683 - 41822733
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtattt-aaattccctcaaaacatt 357  Q
    |||||||||||| |||||| |||||||||||| ||||||||||||||||||    
T  41822683 atccaaacaatggaattcatctcaaagtatttgaaattccctcaaaacatt 41822733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 308 - 354
Target Start/End: Complemental strand, 50471837 - 50471791
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaac 354  Q
    ||||||||||| |||||||||| ||||||||| ||||||||||||||    
T  50471837 atccaaacaataaaattcacctgaaagtatttgaattccctcaaaac 50471791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 311 - 364
Target Start/End: Original strand, 5474474 - 5474527
Alignment:
Q  311 caaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    ||||||||  ||||||||| |||||| || ||||||||||||||||||||||||    
T  5474474 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattcc 5474527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 185 - 245
Target Start/End: Original strand, 6470228 - 6470289
Alignment:
Q  185 agagtgtgtttggatgaggtaattt-gaaaattttaaagaatttaaaattctaggcaattta 245  Q
    ||||||||||||||||||| ||||  |||| |||||||||||||| ||||||||| ||||||    
T  6470228 agagtgtgtttggatgaggcaattgagaaatttttaaagaatttagaattctaggtaattta 6470289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 311 - 364
Target Start/End: Complemental strand, 15034743 - 15034690
Alignment:
Q  311 caaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    ||||||||  ||||||||| |||||| || ||||||||||||||||||||||||    
T  15034743 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattcc 15034690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 308 - 353
Target Start/End: Original strand, 21267796 - 21267841
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaa 353  Q
    ||||||||||||||||| | ||||||||||| ||||||||||||||    
T  21267796 atccaaacaatgaaatttatctcaaagtattcaaattccctcaaaa 21267841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 247 - 288
Target Start/End: Original strand, 24273226 - 24273267
Alignment:
Q  247 ctcaaagtatttgaattccctcataacattgcatttcctcaa 288  Q
    |||||||||||||||||||||||||||||| |||| ||||||    
T  24273226 ctcaaagtatttgaattccctcataacattacattccctcaa 24273267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 312 - 357
Target Start/End: Complemental strand, 32128113 - 32128068
Alignment:
Q  312 aaacaatgaaattcacctcaaagtatttaaattccctcaaaacatt 357  Q
    |||||||| |||||||| |||||||||| |||||||||||||||||    
T  32128113 aaacaatggaattcaccacaaagtatttgaattccctcaaaacatt 32128068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 308 - 357
Target Start/End: Original strand, 37447345 - 37447394
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacatt 357  Q
    |||||||||||| ||||||| ||||||||||| ||||| |||||||||||    
T  37447345 atccaaacaatggaattcacatcaaagtatttgaattctctcaaaacatt 37447394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 308 - 357
Target Start/End: Original strand, 41822529 - 41822578
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacatt 357  Q
    |||||||||||| |||||| || ||||||||| |||||||||||||||||    
T  41822529 atccaaacaatggaattcatcttaaagtatttgaattccctcaaaacatt 41822578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 308 - 357
Target Start/End: Original strand, 49216324 - 49216373
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacatt 357  Q
    |||| |||||||||||| |||||||||||||| ||||||||| |||||||    
T  49216324 atcccaacaatgaaatttacctcaaagtatttgaattccctcgaaacatt 49216373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 364
Target Start/End: Complemental strand, 946461 - 946406
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    |||||||||||  |||||| | |||||||||||||||||||||||||| ||||||||    
T  946461 atccaaacaatagaattcatc-caaagtatttaaattccctcaaaacaatacattcc 946406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 364
Target Start/End: Complemental strand, 947000 - 946944
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    |||||||||||| ||||||||||| ||||||| |||| |||||||| | ||||||||    
T  947000 atccaaacaatggaattcacctcatagtatttgaatttcctcaaaataatacattcc 946944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 324 - 364
Target Start/End: Complemental strand, 4038146 - 4038106
Alignment:
Q  324 tcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    ||||||||||||| || ||||||||||||||||||||||||    
T  4038146 tcacctcaaagtagttgaattccctcaaaacattacattcc 4038106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 243
Target Start/End: Complemental strand, 10167034 - 10166986
Alignment:
Q  195 tggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatt 243  Q
    ||||| ||||||||   ||||||||||||||||||||||||||||||||    
T  10167034 tggataaggtaattgataaattttaaagaatttaaaattctaggcaatt 10166986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 245
Target Start/End: Original strand, 21267346 - 21267406
Alignment:
Q  185 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 245  Q
    |||||||||||||||||| |||||   ||||||||||||||||  |||| |||||||||||    
T  21267346 agagtgtgtttggatgagataattgagaaattttaaagaatttcgaattataggcaattta 21267406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 364
Target Start/End: Complemental strand, 35491244 - 35491188
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    |||||||||||||||||||  ||||| ||||||||||| |||||||| || ||||||    
T  35491244 atccaaacaatgaaattcatatcaaaatatttaaattctctcaaaacgttgcattcc 35491188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 243
Target Start/End: Original strand, 37036502 - 37036562
Alignment:
Q  183 ttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatt 243  Q
    |||||||||||||||||| |||||||   ||||||| ||||||||| ||||||||| ||||    
T  37036502 ttagagtgtgtttggatggggtaattaagaaattttgaagaatttagaattctaggtaatt 37036562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 243
Target Start/End: Original strand, 37446881 - 37446941
Alignment:
Q  183 ttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatt 243  Q
    |||||||||||||||||| |||||||   ||||||| ||||||||| ||||||||| ||||    
T  37446881 ttagagtgtgtttggatggggtaattaagaaattttgaagaatttataattctaggtaatt 37446941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 312 - 364
Target Start/End: Complemental strand, 38277498 - 38277446
Alignment:
Q  312 aaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    |||||||  |||||||||||||||| || |||||| |||||||||||||||||    
T  38277498 aaacaatataattcacctcaaagtagttgaattccttcaaaacattacattcc 38277446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 185 - 236
Target Start/End: Complemental strand, 4663859 - 4663808
Alignment:
Q  185 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattcta 236  Q
    ||||| ||||||||||||||||||   ||||||||| |||||||||||||||    
T  4663859 agagtttgtttggatgaggtaattgacaaattttaaggaatttaaaattcta 4663808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 184 - 243
Target Start/End: Original strand, 23969438 - 23969497
Alignment:
Q  184 tagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatt 243  Q
    ||||||||||||||||| |||||||  ||  ||||||||||||||||||| || ||||||    
T  23969438 tagagtgtgtttggatggggtaattgaaattttttaaagaatttaaaattataagcaatt 23969497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 182 - 245
Target Start/End: Complemental strand, 31166764 - 31166701
Alignment:
Q  182 tttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 245  Q
    |||||||||||||||||| ||||||||   ||||| ||||||||||| || ||||| |||||||    
T  31166764 tttagagtgtgtttggatcaggtaattgagaaattgtaaagaatttagaaatctagtcaattta 31166701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 185 - 244
Target Start/End: Complemental strand, 32128633 - 32128574
Alignment:
Q  185 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattt 244  Q
    |||||||||||| | |||||||||   |||||||||||||||||||||| |||| |||||    
T  32128633 agagtgtgtttgaacgaggtaattgagaaattttaaagaatttaaaattttaggtaattt 32128574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 307 - 358
Target Start/End: Complemental strand, 34003465 - 34003414
Alignment:
Q  307 catccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacatta 358  Q
    |||||||| |||| ||||||||||||||||||| ||| ||||||||| ||||    
T  34003465 catccaaataatggaattcacctcaaagtatttgaatgccctcaaaatatta 34003414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 307 - 350
Target Start/End: Complemental strand, 34003549 - 34003506
Alignment:
Q  307 catccaaacaatgaaattcacctcaaagtatttaaattccctca 350  Q
    ||||||||||||| ||||||||||||||||||| ||||| ||||    
T  34003549 catccaaacaatggaattcacctcaaagtatttgaattctctca 34003506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 308 - 363
Target Start/End: Original strand, 37036935 - 37036990
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattc 363  Q
    |||| ||||||| |||| || ||||| ||||| |||||||||||||||||||||||    
T  37036935 atccgaacaatggaatttacatcaaaatatttgaattccctcaaaacattacattc 37036990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 183 - 245
Target Start/End: Original strand, 37447424 - 37447486
Alignment:
Q  183 ttagagtgtgtttggatgaggtaatttga-aaattttaaagaatttaaaattctaggcaattta 245  Q
    ||||||||||||||||||| || |||||| ||||||| ||||||||| ||||||||| ||||||    
T  37447424 ttagagtgtgtttggatgaagt-atttgagaaattttgaagaatttagaattctaggtaattta 37447486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 190 - 245
Target Start/End: Original strand, 41822078 - 41822133
Alignment:
Q  190 gtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 245  Q
    |||||||||||| ||||||   |||||||| |||||||| ||||||||||||||||    
T  41822078 gtgtttggatgaagtaattgagaaattttacagaatttagaattctaggcaattta 41822133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 311 - 357
Target Start/End: Complemental strand, 32573006 - 32572960
Alignment:
Q  311 caaacaatgaaattcacctcaaagtatttaaattccctcaaaacatt 357  Q
    ||||||||  |||||||||||||||| || |||||||||||||||||    
T  32573006 caaacaatagaattcacctcaaagtagttgaattccctcaaaacatt 32572960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 308 - 362
Target Start/End: Complemental strand, 32647388 - 32647334
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacatt 362  Q
    ||||||||||||  ||||||| |||||||||| |||| |||||||||| ||||||    
T  32647388 atccaaacaatggtattcaccccaaagtatttgaatttcctcaaaacaatacatt 32647334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 187 - 245
Target Start/End: Complemental strand, 44571738 - 44571680
Alignment:
Q  187 agtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 245  Q
    ||||||||| |||||||||||| | ||||| ||||||||||| ||| ||||| ||||||    
T  44571738 agtgtgtttcgatgaggtaattgggaaattataaagaatttagaatcctaggtaattta 44571680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 250 - 288
Target Start/End: Original strand, 47165221 - 47165259
Alignment:
Q  250 aaagtatttgaattccctcataacattgcatttcctcaa 288  Q
    |||||||||||||||||||| |||||| |||||||||||    
T  47165221 aaagtatttgaattccctcaaaacattacatttcctcaa 47165259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 357
Target Start/End: Original strand, 52135610 - 52135660
Alignment:
Q  307 catccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacatt 357  Q
    |||||||||||| ||||| |||| ||| ||||| |||||||||||||||||    
T  52135610 catccaaacaataaaatttacctaaaaatatttgaattccctcaaaacatt 52135660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 364
Target Start/End: Original strand, 4038150 - 4038203
Alignment:
Q  311 caaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    ||||||||  ||||||||| |||||| || ||||||||||||||||||| ||||    
T  4038150 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattactttcc 4038203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 323 - 364
Target Start/End: Original strand, 32287934 - 32287975
Alignment:
Q  323 ttcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    ||||| ||||||||||| |||| |||||||||||||||||||    
T  32287934 ttcacttcaaagtatttgaatttcctcaaaacattacattcc 32287975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 308 - 357
Target Start/End: Original strand, 41823146 - 41823195
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacatt 357  Q
    |||||||||||| |||||| ||||| |||||| |||||| ||||||||||    
T  41823146 atccaaacaatggaattcatctcaaggtatttgaattccttcaaaacatt 41823195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Original strand, 45565478 - 45565515
Alignment:
Q  320 aaattcacctcaaagtatttaaattccctcaaaacatt 357  Q
    ||||||||||||||||| || |||||||||||||||||    
T  45565478 aaattcacctcaaagtagttgaattccctcaaaacatt 45565515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 321 - 357
Target Start/End: Complemental strand, 5474473 - 5474437
Alignment:
Q  321 aattcacctcaaagtatttaaattccctcaaaacatt 357  Q
    ||||||| |||||||| ||||||||||||||||||||    
T  5474473 aattcacttcaaagtaattaaattccctcaaaacatt 5474437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 221
Target Start/End: Original strand, 21088258 - 21088294
Alignment:
Q  185 agagtgtgtttggatgaggtaatttgaaaattttaaa 221  Q
    |||||||||||| ||||||||||| ||||||||||||    
T  21088258 agagtgtgtttgaatgaggtaattggaaaattttaaa 21088294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 288
Target Start/End: Original strand, 26501086 - 26501126
Alignment:
Q  248 tcaaagtatttgaattccctcataacattgcatttcctcaa 288  Q
    |||||||||||||||||||||| |||||| |||| ||||||    
T  26501086 tcaaagtatttgaattccctcaaaacattacattccctcaa 26501126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 243
Target Start/End: Original strand, 37447969 - 37448029
Alignment:
Q  183 ttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatt 243  Q
    |||||||||||||||||| |||||||   ||||||| | ||||||| ||||||||| ||||    
T  37447969 ttagagtgtgtttggatggggtaattgagaaattttgatgaatttagaattctagggaatt 37448029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 356
Target Start/End: Complemental strand, 39887214 - 39887166
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacat 356  Q
    |||||||||||| ||||||| ||||||||||| |||| | |||||||||    
T  39887214 atccaaacaatggaattcacatcaaagtatttgaatttcttcaaaacat 39887166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 311 - 363
Target Start/End: Complemental strand, 50005163 - 50005111
Alignment:
Q  311 caaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattc 363  Q
    ||||||||  |||||||||||||| | || ||||| |||||||||||||||||    
T  50005163 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattc 50005111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 140; Significance: 3e-73; HSPs: 77)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 185 - 364
Target Start/End: Original strand, 37722754 - 37722933
Alignment:
Q  185 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatttatctcaaagtatttgaattccctcataacattgcatttcc 284  Q
    |||||||||||||||   |||||||| ||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| | |||||||    
T  37722754 agagtgtgtttggattgagtaatttggaaattttaaagaatttaaaattctaggtaatttacctcaaagtatttgaattccctcataacactacatttcc 37722853  T
Q  285 tcaacattacattacattcccccatccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  37722854 tcaacattacattacattcccccatccaaacaatggaattcacctcaaagtatttgaattccctcaaaacattacattcc 37722933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 187 - 364
Target Start/End: Original strand, 19533769 - 19533946
Alignment:
Q  187 agtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatttatctcaaagtatttgaattccctcataacattgcatttcctc 286  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| |||||| ||||||||||||||| ||| ||| |||||||||    
T  19533769 agtgtgtttgaatgaggtaatttggaaattttaaagaatttaaaattctaggcaatttacctcaaaatatttgaattccctcgtaatattacatttcctc 19533868  T
Q  287 aacattacattacattcccccatccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||    
T  19533869 aagattacattacattcccccatccaaacaatgaaattcacctcaaagtatttgaattccctcataacattacattcc 19533946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 183 - 364
Target Start/End: Original strand, 25935149 - 25935329
Alignment:
Q  183 ttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatttatctcaaagtatttgaattccctcataacattgcattt 282  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||    
T  25935149 ttagagtgtgtttggatgaggtaatttagaaattttaaagaatttaaaattctaggcaatt-atctcaaagtatttgaattccctcataacattacattt 25935247  T
Q  283 cctcaacattacattacattcccccatccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    | | ||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| ||||| |||||||||||||    
T  25935248 cattaacattacattacattcccccatccaaacaatggaattcacctcaaagtatttgaatttcctcataacattacattcc 25935329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 183 - 357
Target Start/End: Original strand, 12064316 - 12064500
Alignment:
Q  183 ttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatttatctcaaagtatttgaattccctcataacattgcattt 282  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| |||||    
T  12064316 ttagagtgtgtttggatgaggtaatttggaaattttaaagaatttaaaattctaggcaatttacctcaaagtatttgaattcccacataacattacattt 12064415  T
Q  283 cctcaacattacattac----------attcccccatccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacatt 357  Q
    |||||||||||||||||          ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12064416 cctcaacattacattacattacattatatttccccatccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacatt 12064500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 218 - 364
Target Start/End: Original strand, 37145395 - 37145540
Alignment:
Q  218 taaagaatttaaaattctaggcaatttatctcaaagtatttgaattccctcataacattgcatttcctcaacattacattacattcccccatccaaacaa 317  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||| || ||||||||||||||||||| |||||||||||    
T  37145395 taaagaatttaaaattctaggcaatt-atctcaaagtatttgaattccctcatagcattacattttcttaacattacattacattccctcatccaaacaa 37145493  T
Q  318 tgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    |||||||||||||||||||||| ||||| |||| |||||||||||||    
T  37145494 tgaaattcacctcaaagtatttgaattctctcataacattacattcc 37145540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 185 - 276
Target Start/End: Original strand, 20320529 - 20320620
Alignment:
Q  185 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatttatctcaaagtatttgaattccctcataacatt 276  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| |||||    
T  20320529 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatttacctcaaagtatttgaattccttcattacatt 20320620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 183 - 245
Target Start/End: Original strand, 32249647 - 32249709
Alignment:
Q  183 ttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 245  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  32249647 ttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttagaattctaggcaattta 32249709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 185 - 245
Target Start/End: Complemental strand, 12480449 - 12480389
Alignment:
Q  185 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 245  Q
    |||||||||||||||||||||||| ||||||||||||||||||| ||||||| ||||||||    
T  12480449 agagtgtgtttggatgaggtaattggaaaattttaaagaatttagaattctaagcaattta 12480389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 185 - 245
Target Start/End: Original strand, 13390962 - 13391022
Alignment:
Q  185 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 245  Q
    |||||||||||||||||||||||| | ||||||||||||||||| ||||||| ||||||||    
T  13390962 agagtgtgtttggatgaggtaattgggaaattttaaagaatttagaattctaagcaattta 13391022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 308 - 364
Target Start/End: Complemental strand, 14834911 - 14834855
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    ||||||||||||||||||||||||||||||||  ||||||| |||||||||||||||    
T  14834911 atccaaacaatgaaattcacctcaaagtatttggattcccttaaaacattacattcc 14834855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 177 - 243
Target Start/End: Original strand, 15270409 - 15270475
Alignment:
Q  177 attcctttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatt 243  Q
    ||||| ||||| |||||||| ||||||||||| ||||||||||||||||||| ||||||||| ||||    
T  15270409 attcccttagaatgtgtttgaatgaggtaattggaaaattttaaagaatttagaattctaggtaatt 15270475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 310 - 364
Target Start/End: Original strand, 22303855 - 22303909
Alignment:
Q  310 ccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    ||||||||||||||||||||||| |||||| |||||| |||||||||||||||||    
T  22303855 ccaaacaatgaaattcacctcaaggtatttgaattccttcaaaacattacattcc 22303909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 187 - 245
Target Start/End: Complemental strand, 28490009 - 28489951
Alignment:
Q  187 agtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 245  Q
    |||||||||||||||||||||| ||||||||||| ||||||| ||| ||||||||||||    
T  28490009 agtgtgtttggatgaggtaattagaaaattttaaggaatttagaatcctaggcaattta 28489951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 183 - 245
Target Start/End: Original strand, 40089410 - 40089472
Alignment:
Q  183 ttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 245  Q
    |||||||||||||||||||||||||| | ||||||||||||||||| | | ||||||||||||    
T  40089410 ttagagtgtgtttggatgaggtaattaggaaattttaaagaatttagattcctaggcaattta 40089472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 308 - 362
Target Start/End: Original strand, 40090397 - 40090451
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacatt 362  Q
    |||||||||||| ||||||||||||||||||| |||||| |||||||||||||||    
T  40090397 atccaaacaatggaattcacctcaaagtatttgaattccatcaaaacattacatt 40090451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 183 - 245
Target Start/End: Original strand, 41761742 - 41761804
Alignment:
Q  183 ttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 245  Q
    ||||||||||||||||||||||||||   ||||||||||||||||| |||| |||||||||||    
T  41761742 ttagagtgtgtttggatgaggtaattgagaaattttaaagaatttagaattttaggcaattta 41761804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 308 - 357
Target Start/End: Complemental strand, 33146260 - 33146211
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacatt 357  Q
    |||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  33146260 atccaaacaatggaattcacctcaaagtatttgaattccctcaaaacatt 33146211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 308 - 364
Target Start/End: Complemental strand, 927389 - 927333
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    |||||||||||| |||||||| |||||||||| ||||||||||||||| ||||||||    
T  927389 atccaaacaatggaattcaccccaaagtatttgaattccctcaaaacaatacattcc 927333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 300 - 364
Target Start/End: Original strand, 20320623 - 20320687
Alignment:
Q  300 attcccccatccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    |||||||||||||||||||| |||||||  |||||||||| |||||||| |||| ||||||||||    
T  20320623 attcccccatccaaacaatggaattcacaccaaagtatttgaattcccttaaaatattacattcc 20320687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 308 - 356
Target Start/End: Complemental strand, 28490079 - 28490031
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacat 356  Q
    |||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  28490079 atccaaacaatggaattcacctcaaagtatttgaattccctcaaaacat 28490031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 193 - 245
Target Start/End: Original strand, 38178813 - 38178865
Alignment:
Q  193 tttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 245  Q
    |||||||||||||||| ||||||||||||||||||| |||| |||||||||||    
T  38178813 tttggatgaggtaattggaaaattttaaagaatttagaattataggcaattta 38178865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 193 - 245
Target Start/End: Original strand, 38206037 - 38206089
Alignment:
Q  193 tttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 245  Q
    |||||||||||||||| ||||||||||||||||||| |||| |||||||||||    
T  38206037 tttggatgaggtaattggaaaattttaaagaatttagaattataggcaattta 38206089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 182 - 245
Target Start/End: Complemental strand, 927853 - 927790
Alignment:
Q  182 tttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 245  Q
    ||||||||||||||| |||||||||||   ||||||||||||||||| |||||||| |||||||    
T  927853 tttagagtgtgtttgaatgaggtaattgagaaattttaaagaatttagaattctagacaattta 927790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 185 - 243
Target Start/End: Original strand, 6771823 - 6771881
Alignment:
Q  185 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatt 243  Q
    |||||||||||||||||| ||||| | ||||||||||||||||| ||||||| ||||||    
T  6771823 agagtgtgtttggatgagttaattgggaaattttaaagaatttagaattctatgcaatt 6771881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 308 - 362
Target Start/End: Complemental strand, 8255113 - 8255060
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacatt 362  Q
    |||||||||||||||||||||| ||| ||||| ||||||||||||||||||||||    
T  8255113 atccaaacaatgaaattcacctaaaa-tatttgaattccctcaaaacattacatt 8255060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 312 - 362
Target Start/End: Complemental strand, 12479990 - 12479940
Alignment:
Q  312 aaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacatt 362  Q
    |||||||||||||||||||||||||||| |||| ||||||||| |||||||    
T  12479990 aaacaatgaaattcacctcaaagtatttgaatttcctcaaaactttacatt 12479940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 311 - 357
Target Start/End: Original strand, 15270840 - 15270886
Alignment:
Q  311 caaacaatgaaattcacctcaaagtatttaaattccctcaaaacatt 357  Q
    ||||||||| ||||||||||||||||||| |||||||||||||||||    
T  15270840 caaacaatggaattcacctcaaagtatttgaattccctcaaaacatt 15270886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 180 - 245
Target Start/End: Original strand, 15579993 - 15580059
Alignment:
Q  180 cctttagagtgtgtttggatgagg-taatttgaaaattttaaagaatttaaaattctaggcaattta 245  Q
    |||| ||||||||||||||||||| ||||| | |||||||||| ||||||||||||||| |||||||    
T  15579993 ccttaagagtgtgtttggatgagggtaattaggaaattttaaaaaatttaaaattctagacaattta 15580059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 311 - 357
Target Start/End: Original strand, 17542347 - 17542393
Alignment:
Q  311 caaacaatgaaattcacctcaaagtatttaaattccctcaaaacatt 357  Q
    ||||||||| ||||||||||||||||||| |||||||||||||||||    
T  17542347 caaacaatggaattcacctcaaagtatttgaattccctcaaaacatt 17542393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 183 - 245
Target Start/End: Original strand, 22304732 - 22304794
Alignment:
Q  183 ttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 245  Q
    ||||||||| ||| |||||||||||| | ||||||||||||||||| ||| ||||||||||||    
T  22304732 ttagagtgtattttgatgaggtaattgggaaattttaaagaatttagaatcctaggcaattta 22304794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 307 - 359
Target Start/End: Original strand, 6772195 - 6772245
Alignment:
Q  307 catccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattac 359  Q
    ||||||||||||||||||||||||  |||||||||||||||||| ||||||||    
T  6772195 catccaaacaatgaaattcacctc--agtatttaaattccctcataacattac 6772245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 307 - 356
Target Start/End: Original strand, 17492630 - 17492679
Alignment:
Q  307 catccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacat 356  Q
    ||||||||||||| ||||||||||||| ||||| ||||||||||||||||    
T  17492630 catccaaacaatggaattcacctcaaattatttgaattccctcaaaacat 17492679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 188 - 245
Target Start/End: Complemental strand, 22304729 - 22304672
Alignment:
Q  188 gtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 245  Q
    |||||||||||||||||||||   ||||||||||||||||| |||||||| |||||||    
T  22304729 gtgtgtttggatgaggtaattgagaaattttaaagaatttagaattctagacaattta 22304672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 308 - 357
Target Start/End: Complemental strand, 22305181 - 22305132
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacatt 357  Q
    |||||||||||| |||||||||||||||| || |||||||||||||||||    
T  22305181 atccaaacaatggaattcacctcaaagtagttgaattccctcaaaacatt 22305132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 183 - 245
Target Start/End: Complemental strand, 28490458 - 28490395
Alignment:
Q  183 ttagagtgtgtttggatgaggtaatttgaaaatttt--aaagaatttaaaattctaggcaattta 245  Q
    |||||||||||||||||||||||||| |||| ||||  |||||||||||||||| ||||||||||    
T  28490458 ttagagtgtgtttggatgaggtaatt-gaaatttttttaaagaatttaaaattcaaggcaattta 28490395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 308 - 357
Target Start/End: Original strand, 37241093 - 37241142
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacatt 357  Q
    |||||||||||| ||||||||||||||||||| |||||||| ||||||||    
T  37241093 atccaaacaatggaattcacctcaaagtatttcaattccctgaaaacatt 37241142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 308 - 364
Target Start/End: Original strand, 9894305 - 9894361
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    |||||||||||| ||||||||||||||||||| ||||||||   |||||||||||||    
T  9894305 atccaaacaatggaattcacctcaaagtatttgaattccctggtaacattacattcc 9894361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 185 - 245
Target Start/End: Original strand, 17541884 - 17541944
Alignment:
Q  185 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 245  Q
    ||||||||||||||||||||||||   ||||||||||||||||| ||| |||| |||||||    
T  17541884 agagtgtgtttggatgaggtaattgagaaattttaaagaatttagaatcctagacaattta 17541944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 308 - 364
Target Start/End: Complemental strand, 22767039 - 22766983
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    |||||||||||  ||||||||| ||||||||| |||||||||||||||||| |||||    
T  22767039 atccaaacaatagaattcaccttaaagtatttgaattccctcaaaacattatattcc 22766983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 308 - 364
Target Start/End: Original strand, 32250081 - 32250137
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    |||||||||||| |||||| ||||| |||||| ||||||||||||||||||| ||||    
T  32250081 atccaaacaatggaattcatctcaaggtatttgaattccctcaaaacattactttcc 32250137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 308 - 364
Target Start/End: Original strand, 41762198 - 41762254
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    |||||||||||| |||||||| |||||||||| |||||||| |||||| ||||||||    
T  41762198 atccaaacaatggaattcaccccaaagtatttgaattcccttaaaacaatacattcc 41762254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 321 - 364
Target Start/End: Complemental strand, 15374034 - 15373991
Alignment:
Q  321 aattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    |||||||||||||||| || ||||||||||||||||||||||||    
T  15374034 aattcacctcaaagtagttgaattccctcaaaacattacattcc 15373991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 32317225 - 32317175
Alignment:
Q  182 tttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaatt 233  Q
    ||||||| |||||||||| |||||||| ||||||||||||||||||||||||    
T  32317225 tttagagagtgtttggattaggtaatt-gaaaattttaaagaatttaaaatt 32317175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 321 - 364
Target Start/End: Original strand, 32390057 - 32390100
Alignment:
Q  321 aattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    |||||||||||||||| || ||||||||||||||||||||||||    
T  32390057 aattcacctcaaagtagttgaattccctcaaaacattacattcc 32390100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 307 - 362
Target Start/End: Complemental strand, 35379431 - 35379376
Alignment:
Q  307 catccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacatt 362  Q
    ||||||| |||| |||||||| |||||| |||| ||||||||||||||||||||||    
T  35379431 catccaatcaataaaattcacttcaaagaatttgaattccctcaaaacattacatt 35379376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 322 - 364
Target Start/End: Original strand, 2721557 - 2721599
Alignment:
Q  322 attcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    ||||||||||||||| || ||||||||||||||||||||||||    
T  2721557 attcacctcaaagtagttgaattccctcaaaacattacattcc 2721599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 243
Target Start/End: Complemental strand, 35111760 - 35111702
Alignment:
Q  185 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatt 243  Q
    |||||||||||||||| |||||||   ||||||||||||||||| ||||||||| ||||    
T  35111760 agagtgtgtttggatggggtaattgagaaattttaaagaatttagaattctagggaatt 35111702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 321 - 363
Target Start/End: Original strand, 37241598 - 37241640
Alignment:
Q  321 aattcacctcaaagtatttaaattccctcaaaacattacattc 363  Q
    |||||| |||||||||||| |||||||||||||||||||||||    
T  37241598 aattcagctcaaagtatttgaattccctcaaaacattacattc 37241640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 247 - 288
Target Start/End: Original strand, 19533910 - 19533951
Alignment:
Q  247 ctcaaagtatttgaattccctcataacattgcatttcctcaa 288  Q
    |||||||||||||||||||||||||||||| |||| ||||||    
T  19533910 ctcaaagtatttgaattccctcataacattacattccctcaa 19533951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 308 - 357
Target Start/End: Complemental strand, 34105158 - 34105109
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacatt 357  Q
    ||||||||||||||||||| |||||||||||| ||||  |||||||||||    
T  34105158 atccaaacaatgaaattcatctcaaagtatttgaattttctcaaaacatt 34105109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 186 - 243
Target Start/End: Complemental strand, 37091135 - 37091078
Alignment:
Q  186 gagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatt 243  Q
    ||||||||||||||||||||||| | |||| |||||||||||| || |||||| ||||    
T  37091135 gagtgtgtttggatgaggtaattggtaaatcttaaagaatttagaactctaggtaatt 37091078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 181 - 218
Target Start/End: Complemental strand, 37145399 - 37145362
Alignment:
Q  181 ctttagagtgtgtttggatgaggtaatttgaaaatttt 218  Q
    |||||||||||||||||||||||||||||| |||||||    
T  37145399 ctttagagtgtgtttggatgaggtaatttggaaatttt 37145362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 324 - 364
Target Start/End: Original strand, 9764426 - 9764466
Alignment:
Q  324 tcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    ||||||||||||| || ||||||||||||||||||||||||    
T  9764426 tcacctcaaagtagttgaattccctcaaaacattacattcc 9764466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 227
Target Start/End: Original strand, 17492691 - 17492731
Alignment:
Q  187 agtgtgtttggatgaggtaatttgaaaattttaaagaattt 227  Q
    |||||||||||||||||||||| |||||||||||| |||||    
T  17492691 agtgtgtttggatgaggtaattagaaaattttaaaaaattt 17492731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 311 - 363
Target Start/End: Original strand, 20523208 - 20523260
Alignment:
Q  311 caaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattc 363  Q
    ||||||||  ||||||||| |||||| || |||||||||||||||||||||||    
T  20523208 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattc 20523260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 243
Target Start/End: Original strand, 33995442 - 33995502
Alignment:
Q  183 ttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatt 243  Q
    ||||||||||||||||||| ||||||   ||||||||||||| ||| |||| |||||||||    
T  33995442 ttagagtgtgtttggatgatgtaattgacaaattttaaagaaattagaattttaggcaatt 33995502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 321 - 364
Target Start/End: Original strand, 2316464 - 2316507
Alignment:
Q  321 aattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    |||||||||||||||| || ||||| ||||||||||||||||||    
T  2316464 aattcacctcaaagtagttgaattctctcaaaacattacattcc 2316507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 321 - 364
Target Start/End: Complemental strand, 3563351 - 3563308
Alignment:
Q  321 aattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    ||||||||| |||||| || ||||||||||||||||||||||||    
T  3563351 aattcaccttaaagtagttgaattccctcaaaacattacattcc 3563308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 307 - 358
Target Start/End: Complemental strand, 11601127 - 11601076
Alignment:
Q  307 catccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacatta 358  Q
    |||||||| ||| |||||||||||||| ||||| |||||| |||||||||||    
T  11601127 catccaaataataaaattcacctcaaattatttgaattccttcaaaacatta 11601076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 321 - 364
Target Start/End: Original strand, 16515103 - 16515146
Alignment:
Q  321 aattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    |||||||||||||| | || ||||||||||||||||||||||||    
T  16515103 aattcacctcaaagaagttgaattccctcaaaacattacattcc 16515146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 321 - 364
Target Start/End: Original strand, 26281265 - 26281308
Alignment:
Q  321 aattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    ||||||||| |||||| || ||||||||||||||||||||||||    
T  26281265 aattcaccttaaagtagttgaattccctcaaaacattacattcc 26281308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 321 - 364
Target Start/End: Original strand, 32470967 - 32471010
Alignment:
Q  321 aattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    |||||| ||||||||| || ||||||||||||||||||||||||    
T  32470967 aattcaactcaaagtagttgaattccctcaaaacattacattcc 32471010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Complemental strand, 2550385 - 2550348
Alignment:
Q  320 aaattcacctcaaagtatttaaattccctcaaaacatt 357  Q
    ||||||||||||||||| || |||||||||||||||||    
T  2550385 aaattcacctcaaagtagttgaattccctcaaaacatt 2550348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 245
Target Start/End: Complemental strand, 8255507 - 8255446
Alignment:
Q  184 tagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 245  Q
    |||||| |||||||||||| |||||   ||||||| ||||||||| |||| |||||||||||    
T  8255507 tagagtatgtttggatgagataattgagaaattttgaagaatttataattttaggcaattta 8255446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 364
Target Start/End: Complemental strand, 9764422 - 9764369
Alignment:
Q  311 caaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    ||||||||  ||||||||| |||||| || ||||||||||||||||||| ||||    
T  9764422 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattactttcc 9764369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 364
Target Start/End: Original strand, 15374035 - 15374088
Alignment:
Q  311 caaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    ||||||||  ||||||||| | |||| || ||||||||||||||||||||||||    
T  15374035 caaacaatagaattcaccttagagtagttgaattccctcaaaacattacattcc 15374088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 288
Target Start/End: Original strand, 25935293 - 25935334
Alignment:
Q  247 ctcaaagtatttgaattccctcataacattgcatttcctcaa 288  Q
    ||||||||||||||||| |||||||||||| |||| ||||||    
T  25935293 ctcaaagtatttgaatttcctcataacattacattccctcaa 25935334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 312 - 353
Target Start/End: Complemental strand, 28489546 - 28489505
Alignment:
Q  312 aaacaatgaaattcacctcaaagtatttaaattccctcaaaa 353  Q
    |||||||| ||||||||||||||||||| ||||| |||||||    
T  28489546 aaacaatggaattcacctcaaagtatttgaattctctcaaaa 28489505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 245
Target Start/End: Complemental strand, 33146639 - 33146570
Alignment:
Q  176 aattcctttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 245  Q
    |||| ||| ||||||||||||||||||||| ||   |||||| |||||||||| |||  |||||||||||    
T  33146639 aatttcttaagagtgtgtttggatgaggtagttgagaaatttcaaagaatttagaatcttaggcaattta 33146570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 288
Target Start/End: Original strand, 37145504 - 37145545
Alignment:
Q  247 ctcaaagtatttgaattccctcataacattgcatttcctcaa 288  Q
    |||||||||||||||||| ||||||||||| |||| ||||||    
T  37145504 ctcaaagtatttgaattctctcataacattacattccctcaa 37145545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 288
Target Start/End: Original strand, 37722897 - 37722938
Alignment:
Q  247 ctcaaagtatttgaattccctcataacattgcatttcctcaa 288  Q
    ||||||||||||||||||||||| |||||| |||| ||||||    
T  37722897 ctcaaagtatttgaattccctcaaaacattacattccctcaa 37722938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 288
Target Start/End: Original strand, 40090417 - 40090458
Alignment:
Q  247 ctcaaagtatttgaattccctcataacattgcatttcctcaa 288  Q
    ||||||||||||||||||| ||| |||||| |||||||||||    
T  40090417 ctcaaagtatttgaattccatcaaaacattacatttcctcaa 40090458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 320 - 364
Target Start/End: Complemental strand, 30519079 - 30519035
Alignment:
Q  320 aaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    ||||||||| |||| ||||| |||||||||| |||||||||||||    
T  30519079 aaattcaccgcaaaatatttgaattccctcataacattacattcc 30519035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 320 - 364
Target Start/End: Complemental strand, 30559419 - 30559375
Alignment:
Q  320 aaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    ||||||||| |||| ||||| |||||||||| |||||||||||||    
T  30559419 aaattcaccgcaaaatatttgaattccctcataacattacattcc 30559375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 364
Target Start/End: Complemental strand, 35111313 - 35111257
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    |||||||||||  || |||| ||||| ||||| |||||| |||||||||||||||||    
T  35111313 atccaaacaatagaactcacatcaaaatatttgaattccttcaaaacattacattcc 35111257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 311 - 363
Target Start/End: Original strand, 40809416 - 40809468
Alignment:
Q  311 caaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattc 363  Q
    |||||||| |||||||||| ||||||  | ||||| |||||||||||||||||    
T  40809416 caaacaataaaattcaccttaaagtagctgaattcactcaaaacattacattc 40809468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 226
Target Start/End: Complemental strand, 41789634 - 41789591
Alignment:
Q  182 tttagagtgtgtttggatgaggtaatttgaaaattttaaagaatt 226  Q
    ||||||||||||||||| |||||||  ||||||||||||||||||    
T  41789634 tttagagtgtgtttggacgaggtaa-atgaaaattttaaagaatt 41789591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 138; Significance: 4e-72; HSPs: 62)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 180 - 364
Target Start/End: Complemental strand, 23011949 - 23011765
Alignment:
Q  180 cctttagagtgtgttt-ggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatttatctcaaagtatttgaattccctcataacattgc 278  Q
    |||||||||||||||| ||||||||||||||  |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |    
T  23011949 cctttagagtgtgttttggatgaggtaatttagaaattttaaagaatttaaaattctaggcaatt-atctcaaagtatttgaattccctcataacattac 23011851  T
Q  279 atttcctcaacattacattacattcccccatccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    ||||||| |||||||||||| |||||||||||||||||||| ||||||||||||||||||| |||||||||| |||||||||||||    
T  23011850 atttccttaacattacattaaattcccccatccaaacaatggaattcacctcaaagtatttgaattccctcataacattacattcc 23011765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 183 - 357
Target Start/End: Original strand, 30444804 - 30444978
Alignment:
Q  183 ttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatttatctcaaagtatttgaattccctcataacattgcattt 282  Q
    ||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| || ||||||| |||||    
T  30444804 ttagagtgtgtttggatgaagtaatttggaaattttaaagaatttaaaattctaggcaatttacctcaaagtatttgaattccttcctaacattacattt 30444903  T
Q  283 cctcaacattacattacattcccccatccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacatt 357  Q
    ||| || ||||||||||||||| |||||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  30444904 ccttaatattacattacattccaccatccaaacaatggaattcacctcaaagtatttgaattccctcaaaacatt 30444978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 187 - 364
Target Start/End: Complemental strand, 36103308 - 36103132
Alignment:
Q  187 agtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatttatctcaaagtatttgaattccctcataacattgcatttcctc 286  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || ||| |||||||||| | |||||||||| |||||||||    
T  36103308 agtgtgtttggatgaggtaatttggaaattttaaagaatttaaaattctaggcaatttacctaaaa-tatttgaatttcttcataacattacatttcctc 36103210  T
Q  287 aacattacattacattcccccatccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    || |||||||||||||||||||||||||||||| ||||||| ||||||||||| |||| ||| |||||||||||||||    
T  36103209 aatattacattacattcccccatccaaacaatgcaattcacatcaaagtatttgaatttccttaaaacattacattcc 36103132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 229 - 364
Target Start/End: Original strand, 515449 - 515584
Alignment:
Q  229 aaattctaggcaatttatctcaaagtatttgaattccctcataacattgcatttcctcaacattacattacattcccccatccaaacaatgaaattcacc 328  Q
    ||||| ||||||||||| |||||| |||||||||||| |||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||     
T  515449 aaattttaggcaatttacctcaaaatatttgaattccttcataacattacatttcctcaatattacattacattcccccatccaaacaatgaaattcaca 515548  T
Q  329 tcaaagtatttaaattccctcaaaacattacattcc 364  Q
    ||||||||||| || ||||| |||||||||||||||    
T  515549 tcaaagtatttgaactcccttaaaacattacattcc 515584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 287 - 364
Target Start/End: Original strand, 21465548 - 21465625
Alignment:
Q  287 aacattacattacattcccccatccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    ||||||||||| ||||||||||||||||||||| |||| |||||||||||||| |||||||||  || ||||||||||    
T  21465548 aacattacattgcattcccccatccaaacaatggaattaacctcaaagtatttgaattccctcgtaaaattacattcc 21465625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 308 - 357
Target Start/End: Complemental strand, 29611457 - 29611408
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacatt 357  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  29611457 atccaaacaatgaaattcacctcaaagtatttgaattccctcaaaacatt 29611408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 308 - 364
Target Start/End: Complemental strand, 8049341 - 8049285
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||| |||||    
T  8049341 atccaaacaatgaaatttacctcaaagtatttgaattccctcaaaacattatattcc 8049285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 185 - 245
Target Start/End: Complemental strand, 29611872 - 29611812
Alignment:
Q  185 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 245  Q
    |||||||||||||||| ||||||| ||||||||||||||||||| |||| |||||||||||    
T  29611872 agagtgtgtttggatgtggtaattggaaaattttaaagaatttagaattttaggcaattta 29611812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 185 - 245
Target Start/End: Original strand, 44346221 - 44346281
Alignment:
Q  185 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 245  Q
    ||||||||||||||||||||||||   ||||||||||||||||| ||||||||||||||||    
T  44346221 agagtgtgtttggatgaggtaattgagaaattttaaagaatttagaattctaggcaattta 44346281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 186 - 245
Target Start/End: Original strand, 31980047 - 31980106
Alignment:
Q  186 gagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 245  Q
    |||||||||||||||||||||||   ||||||||||||||||| ||||||||||||||||    
T  31980047 gagtgtgtttggatgaggtaattgagaaattttaaagaatttagaattctaggcaattta 31980106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 183 - 245
Target Start/End: Complemental strand, 14789 - 14727
Alignment:
Q  183 ttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 245  Q
    ||||||||||||||||||||| ||||   ||||||||||||||||| ||||||||||||||||    
T  14789 ttagagtgtgtttggatgaggaaattgagaaattttaaagaatttagaattctaggcaattta 14727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 308 - 362
Target Start/End: Complemental strand, 13144670 - 13144616
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacatt 362  Q
    |||||||||||| ||||||||||||||||||| |||||||||| |||||||||||    
T  13144670 atccaaacaatggaattcacctcaaagtatttgaattccctcataacattacatt 13144616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 187 - 245
Target Start/End: Complemental strand, 13145131 - 13145073
Alignment:
Q  187 agtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 245  Q
    ||||||||||| |||||||||| | ||| ||||||||||||||||||||||||||||||    
T  13145131 agtgtgtttgggtgaggtaattgggaaaatttaaagaatttaaaattctaggcaattta 13145073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 183 - 245
Target Start/End: Original strand, 33376827 - 33376889
Alignment:
Q  183 ttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 245  Q
    ||||||||||||||||||||||||||   ||||||||||||||||| ||||||||| ||||||    
T  33376827 ttagagtgtgtttggatgaggtaattgataaattttaaagaatttagaattctaggtaattta 33376889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 312 - 362
Target Start/End: Complemental strand, 33986087 - 33986037
Alignment:
Q  312 aaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacatt 362  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  33986087 aaacaatgaaattcacctcaaagtatttgaattctctcaaaacattacatt 33986037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 191 - 245
Target Start/End: Original strand, 40733641 - 40733695
Alignment:
Q  191 tgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 245  Q
    ||||||||||||||||||   ||||||||||||||||||||||||||||||||||    
T  40733641 tgtttggatgaggtaattgagaaattttaaagaatttaaaattctaggcaattta 40733695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 183 - 245
Target Start/End: Complemental strand, 43185531 - 43185469
Alignment:
Q  183 ttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 245  Q
    ||||||||||||||||||||||||||   ||||||||||||||||| |||||||| |||||||    
T  43185531 ttagagtgtgtttggatgaggtaattgagaaattttaaagaatttagaattctagacaattta 43185469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 308 - 357
Target Start/End: Original strand, 26520435 - 26520484
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacatt 357  Q
    |||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  26520435 atccaaacaatggaattcacctcaaagtatttgaattccctcaaaacatt 26520484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 308 - 357
Target Start/End: Complemental strand, 34008868 - 34008819
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacatt 357  Q
    |||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  34008868 atccaaacaatggaattcacctcaaagtatttgaattccctcaaaacatt 34008819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 312 - 364
Target Start/End: Complemental strand, 14321 - 14269
Alignment:
Q  312 aaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    ||||||||||||||||| |||||||||| |||||||| |||||||||||||||    
T  14321 aaacaatgaaattcaccccaaagtatttgaattcccttaaaacattacattcc 14269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 185 - 245
Target Start/End: Original strand, 29256913 - 29256973
Alignment:
Q  185 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 245  Q
    |||||||||||||| |||||||||   ||||||||||||||||| ||||||||||||||||    
T  29256913 agagtgtgtttggacgaggtaattgagaaattttaaagaatttagaattctaggcaattta 29256973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 185 - 245
Target Start/End: Original strand, 35978592 - 35978652
Alignment:
Q  185 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 245  Q
    ||||||||||||||||||| ||||   |||||||||||||||||||||||||| |||||||    
T  35978592 agagtgtgtttggatgaggcaattgagaaattttaaagaatttaaaattctagtcaattta 35978652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 308 - 364
Target Start/End: Complemental strand, 44889441 - 44889385
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    |||||||||||| ||||||| ||||||||||| |||||||||||||||||| |||||    
T  44889441 atccaaacaatggaattcacatcaaagtatttgaattccctcaaaacattatattcc 44889385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 186 - 245
Target Start/End: Complemental strand, 10593620 - 10593562
Alignment:
Q  186 gagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 245  Q
    |||||||||||||||||||||||   |||||||||| |||||||||||||||||||||||    
T  10593620 gagtgtgtttggatgaggtaattgagaaattttaaa-aatttaaaattctaggcaattta 10593562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 186 - 245
Target Start/End: Original strand, 31976666 - 31976725
Alignment:
Q  186 gagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 245  Q
    |||||| ||||||||||||||||   ||||||||||||||||| ||||||||||||||||    
T  31976666 gagtgtttttggatgaggtaattgagaaattttaaagaatttagaattctaggcaattta 31976725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 312 - 362
Target Start/End: Complemental strand, 9982719 - 9982669
Alignment:
Q  312 aaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacatt 362  Q
    |||||||| ||||||||||||| ||||||||||| ||||||||||||||||    
T  9982719 aaacaatggaattcacctcaaaatatttaaattctctcaaaacattacatt 9982669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 310 - 364
Target Start/End: Complemental strand, 24045045 - 24044991
Alignment:
Q  310 ccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    |||||||||| |||||||||||| |||||| |||||| |||||||||||||||||    
T  24045045 ccaaacaatggaattcacctcaaggtatttgaattccttcaaaacattacattcc 24044991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 187 - 245
Target Start/End: Original strand, 26519984 - 26520042
Alignment:
Q  187 agtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 245  Q
    ||||||||||||| | ||||||   ||||||||||||||||||||||||||||||||||    
T  26519984 agtgtgtttggataaagtaattgataaattttaaagaatttaaaattctaggcaattta 26520042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 183 - 245
Target Start/End: Complemental strand, 33986548 - 33986486
Alignment:
Q  183 ttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 245  Q
    ||||||||||||||||||||||||||   |||||||||||||||   ||||||||||||||||    
T  33986548 ttagagtgtgtttggatgaggtaattgagaaattttaaagaattcggaattctaggcaattta 33986486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 311 - 364
Target Start/End: Original strand, 13404902 - 13404955
Alignment:
Q  311 caaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    |||||||| ||||||| ||||||||| || ||||||||||||||||||||||||    
T  13404902 caaacaataaaattcatctcaaagtagttgaattccctcaaaacattacattcc 13404955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 308 - 364
Target Start/End: Original strand, 28324658 - 28324714
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    |||||||||||| |||||| ||||| |||||| |||||| |||||||||||||||||    
T  28324658 atccaaacaatgtaattcagctcaaggtatttgaattccttcaaaacattacattcc 28324714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 308 - 364
Target Start/End: Original strand, 29257347 - 29257403
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    |||||||||||| |||||||| |||||||||| |||||||| |||||| ||||||||    
T  29257347 atccaaacaatggaattcaccccaaagtatttgaattcccttaaaacaatacattcc 29257403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 185 - 245
Target Start/End: Original strand, 29482341 - 29482401
Alignment:
Q  185 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 245  Q
    ||||||||||||||||||||||||   ||||||||||||||||| |||| |||| ||||||    
T  29482341 agagtgtgtttggatgaggtaattgagaaattttaaagaatttagaattataggaaattta 29482401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 308 - 364
Target Start/End: Original strand, 29482803 - 29482859
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    |||||||||||| |||||||| |||||||||| ||||||||||||||| ||| ||||    
T  29482803 atccaaacaatggaattcaccccaaagtatttgaattccctcaaaacaatacgttcc 29482859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 308 - 364
Target Start/End: Original strand, 33377293 - 33377349
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    |||||||||||| |||||||| |||||||||| ||||||||||||||| || |||||    
T  33377293 atccaaacaatggaattcaccccaaagtatttgaattccctcaaaacaatatattcc 33377349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 308 - 364
Target Start/End: Original strand, 35979000 - 35979056
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    |||||||||||| ||||||||||||||||||| |||||||||  || ||||||||||    
T  35979000 atccaaacaatggaattcacctcaaagtatttgaattccctcttaagattacattcc 35979056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 308 - 364
Target Start/End: Original strand, 44346674 - 44346730
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    |||||||||||| |||||||| |||||||||| |||||||| |||||| ||||||||    
T  44346674 atccaaacaatggaattcaccccaaagtatttgaattcccttaaaacaatacattcc 44346730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 308 - 362
Target Start/End: Original strand, 31976578 - 31976632
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacatt 362  Q
    ||||||||||||||||||| |||||| ||||| |||| ||||||| |||||||||    
T  31976578 atccaaacaatgaaattcatctcaaaatatttgaatttcctcaaagcattacatt 31976632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 308 - 362
Target Start/End: Original strand, 31980479 - 31980533
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacatt 362  Q
    ||||||| ||||||||||||| |||| ||||| |||||||| |||||||||||||    
T  31980479 atccaaataatgaaattcaccccaaaatatttgaattcccttaaaacattacatt 31980533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 308 - 362
Target Start/End: Original strand, 35404738 - 35404792
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacatt 362  Q
    ||||||||| | |||||||||||||||||||| |||| |||||||| ||||||||    
T  35404738 atccaaacagtaaaattcacctcaaagtatttgaatttcctcaaaatattacatt 35404792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 311 - 364
Target Start/End: Complemental strand, 3853700 - 3853647
Alignment:
Q  311 caaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    ||||||||  |||||||||||||||| || |||| |||||||||||||||||||    
T  3853700 caaacaatagaattcacctcaaagtagttgaatttcctcaaaacattacattcc 3853647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 311 - 364
Target Start/End: Complemental strand, 3858158 - 3858105
Alignment:
Q  311 caaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    ||||||||  |||||||||||||||| || |||| |||||||||||||||||||    
T  3858158 caaacaatagaattcacctcaaagtagttgaatttcctcaaaacattacattcc 3858105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 311 - 364
Target Start/End: Original strand, 17110944 - 17110997
Alignment:
Q  311 caaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    ||||||||  ||||||||| |||||| || ||||||||||||||||||||||||    
T  17110944 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattcc 17110997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 247 - 288
Target Start/End: Complemental strand, 23011801 - 23011760
Alignment:
Q  247 ctcaaagtatttgaattccctcataacattgcatttcctcaa 288  Q
    |||||||||||||||||||||||||||||| |||| ||||||    
T  23011801 ctcaaagtatttgaattccctcataacattacattccctcaa 23011760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 230 - 274
Target Start/End: Original strand, 21465308 - 21465352
Alignment:
Q  230 aattctaggcaatttatctcaaagtatttgaattccctcataaca 274  Q
    ||||||||| |||||| || |||||||||||||||||||||||||    
T  21465308 aattctaggtaatttaccttaaagtatttgaattccctcataaca 21465352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 245
Target Start/End: Original strand, 28190227 - 28190291
Alignment:
Q  181 ctttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 245  Q
    ||||||||||| |||| ||||| ||||| |||||||| |||||| ||| ||||||| ||||||||    
T  28190227 ctttagagtgtatttgaatgagataattcgaaaatttgaaagaacttagaattctacgcaattta 28190291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 185 - 236
Target Start/End: Complemental strand, 9983197 - 9983146
Alignment:
Q  185 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattcta 236  Q
    ||||||||||||||||||||||||   ||||||| ||||||||| |||||||    
T  9983197 agagtgtgtttggatgaggtaattgagaaattttgaagaatttagaattcta 9983146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 247 - 282
Target Start/End: Complemental strand, 13144650 - 13144615
Alignment:
Q  247 ctcaaagtatttgaattccctcataacattgcattt 282  Q
    |||||||||||||||||||||||||||||| |||||    
T  13144650 ctcaaagtatttgaattccctcataacattacattt 13144615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 183 - 242
Target Start/End: Original strand, 14013267 - 14013326
Alignment:
Q  183 ttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaat 242  Q
    ||||||||| |||||| ||| ||||| ||||||||| | ||||||| |||||||||||||    
T  14013267 ttagagtgtatttggacgagttaattagaaaattttgatgaatttagaattctaggcaat 14013326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 321 - 364
Target Start/End: Complemental strand, 17110943 - 17110900
Alignment:
Q  321 aattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    |||||| ||||||||| || ||||||||||||||||||||||||    
T  17110943 aattcaactcaaagtagttgaattccctcaaaacattacattcc 17110900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 321 - 364
Target Start/End: Original strand, 42711365 - 42711408
Alignment:
Q  321 aattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    |||||| ||||||||| || ||||||||||||||||||||||||    
T  42711365 aattcaactcaaagtagttgaattccctcaaaacattacattcc 42711408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 245
Target Start/End: Original strand, 1087844 - 1087906
Alignment:
Q  183 ttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 245  Q
    ||||||| |||||| |||||||||||   ||||||||||||||||| |||| |||| ||||||    
T  1087844 ttagagtatgtttgaatgaggtaattgagaaattttaaagaatttagaattttaggaaattta 1087906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 322 - 364
Target Start/End: Complemental strand, 40046877 - 40046835
Alignment:
Q  322 attcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    ||||| ||||||||| || ||||||||||||||||||||||||    
T  40046877 attcaactcaaagtagttgaattccctcaaaacattacattcc 40046835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 364
Target Start/End: Original strand, 4156242 - 4156295
Alignment:
Q  311 caaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    ||||||||  |||||| || |||||| || ||||||||||||||||||||||||    
T  4156242 caaacaatagaattcatcttaaagtagttgaattccctcaaaacattacattcc 4156295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 243
Target Start/End: Complemental strand, 7079825 - 7079780
Alignment:
Q  198 atgaggtaatttgaaaattttaaagaatttaaaattctaggcaatt 243  Q
    |||||||||||   ||||||||||||||||||||||||||| ||||    
T  7079825 atgaggtaattgagaaattttaaagaatttaaaattctaggtaatt 7079780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Complemental strand, 7202922 - 7202885
Alignment:
Q  320 aaattcacctcaaagtatttaaattccctcaaaacatt 357  Q
    ||||||||||||||||| || |||||||||||||||||    
T  7202922 aaattcacctcaaagtagttgaattccctcaaaacatt 7202885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 364
Target Start/End: Original strand, 14800035 - 14800088
Alignment:
Q  311 caaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    |||||||| ||||||||||  ||||| || ||||||||||||||||||| ||||    
T  14800035 caaacaataaaattcaccttgaagtagttgaattccctcaaaacattactttcc 14800088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 245
Target Start/End: Complemental strand, 34009247 - 34009178
Alignment:
Q  176 aattcctttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 245  Q
    |||| ||| ||||||||||||||||||||| ||   |||||| |||||||||| |||  |||||||||||    
T  34009247 aatttcttaagagtgtgtttggatgaggtagttgagaaatttcaaagaatttagaatcttaggcaattta 34009178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 325 - 362
Target Start/End: Original strand, 37268096 - 37268133
Alignment:
Q  325 cacctcaaagtatttaaattccctcaaaacattacatt 362  Q
    ||||||||| || |||||||||||||||||||||||||    
T  37268096 cacctcaaaataattaaattccctcaaaacattacatt 37268133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 276
Target Start/End: Complemental strand, 8049328 - 8049292
Alignment:
Q  240 aatttatctcaaagtatttgaattccctcataacatt 276  Q
    |||||| ||||||||||||||||||||||| ||||||    
T  8049328 aatttacctcaaagtatttgaattccctcaaaacatt 8049292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 288
Target Start/End: Original strand, 13404912 - 13404960
Alignment:
Q  240 aatttatctcaaagtatttgaattccctcataacattgcatttcctcaa 288  Q
    |||| ||||||||||| ||||||||||||| |||||| |||| ||||||    
T  13404912 aattcatctcaaagtagttgaattccctcaaaacattacattccctcaa 13404960  T

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Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 357
Target Start/End: Complemental strand, 42740013 - 42739969
Alignment:
Q  313 aacaatgaaattcacctcaaagtatttaaattccctcaaaacatt 357  Q
    |||||| ||||||| ||||||||| || |||||||||||||||||    
T  42740013 aacaataaaattcatctcaaagtagttgaattccctcaaaacatt 42739969  T

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Target: scaffold0027 (Bit Score: 79; Significance: 7e-37; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 186 - 288
Target Start/End: Complemental strand, 11378 - 11276
Alignment:
Q  186 gagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatttatctcaaagtatttgaattccctcataacattgcatttcct 285  Q
    ||||||||||||||||||||||||| ||||| |||||||||||||||| ||||||||||| ||||||||||||||||||| |||||||||| ||||||||    
T  11378 gagtgtgtttggatgaggtaatttggaaattgtaaagaatttaaaattttaggcaatttacctcaaagtatttgaattccttcataacattacatttcct 11279  T
Q  286 caa 288  Q
    |||    
T  11278 caa 11276  T

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Target: scaffold0027; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 290 - 364
Target Start/End: Complemental strand, 10991 - 10917
Alignment:
Q  290 attacattacattcccccatccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    |||||||||||||||||||||||||||||| ||||||| ||||||||||| ||||||||||||||||||||||||    
T  10991 attacattacattcccccatccaaacaatggaattcacgtcaaagtatttgaattccctcaaaacattacattcc 10917  T

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Target: scaffold0169 (Bit Score: 44; Significance: 6e-16; HSPs: 2)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 308 - 363
Target Start/End: Complemental strand, 4162 - 4107
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattc 363  Q
    |||||||||||  ||||||||||||||||||| |||||||||||||||||||||||    
T  4162 atccaaacaatagaattcacctcaaagtatttgaattccctcaaaacattacattc 4107  T

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Target: scaffold0169; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 183 - 245
Target Start/End: Complemental strand, 4570 - 4508
Alignment:
Q  183 ttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 245  Q
    |||||||||||||||||||  ||||| | ||||||||||||||||| ||||||||||||||||    
T  4570 ttagagtgtgtttggatgaactaattgggaaattttaaagaatttagaattctaggcaattta 4508  T

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Target: scaffold0039 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 308 - 357
Target Start/End: Complemental strand, 109118 - 109069
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacatt 357  Q
    |||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  109118 atccaaacaatggaattcacatcaaagtatttaaattccctcaaaacatt 109069  T

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Target: scaffold0318 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 308 - 363
Target Start/End: Complemental strand, 2953 - 2899
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattc 363  Q
    |||||||||||| ||||||||||||| ||||| |||||||||||||||||||||||    
T  2953 atccaaacaatggaattcacctcaaa-tatttgaattccctcaaaacattacattc 2899  T

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Target: scaffold0318; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 233
Target Start/End: Complemental strand, 3406 - 3358
Alignment:
Q  185 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaatt 233  Q
    ||||||| ||||||||||||||||   ||||||||||||||||| ||||    
T  3406 agagtgtctttggatgaggtaattgagaaattttaaagaatttagaatt 3358  T

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Target: scaffold0417 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 188 - 245
Target Start/End: Original strand, 11499 - 11556
Alignment:
Q  188 gtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 245  Q
    |||||||||||||||||| || ||||||||||||||||||| ||||||| | ||||||    
T  11499 gtgtgtttggatgaggtatttggaaaattttaaagaatttagaattctaagtaattta 11556  T

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Target: scaffold0009 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 321 - 364
Target Start/End: Complemental strand, 42071 - 42028
Alignment:
Q  321 aattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    |||||||||||||||| || ||||||||||||||||||||||||    
T  42071 aattcacctcaaagtagttgaattccctcaaaacattacattcc 42028  T

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Target: scaffold0014 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 308 - 362
Target Start/End: Original strand, 221182 - 221236
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacatt 362  Q
    ||||||| ||||||||||||| |||| ||||| |||||||| |||||||||||||    
T  221182 atccaaataatgaaattcaccccaaaatatttgaattcccttaaaacattacatt 221236  T

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Target: scaffold1562 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold1562
Description:

Target: scaffold1562; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 324 - 364
Target Start/End: Original strand, 493 - 533
Alignment:
Q  324 tcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    ||||||||||||| || ||||||||||||||||||||||||    
T  493 tcacctcaaagtagttgaattccctcaaaacattacattcc 533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1158 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold1158
Description:

Target: scaffold1158; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 324 - 364
Target Start/End: Complemental strand, 2100 - 2060
Alignment:
Q  324 tcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    ||||||||||||| || ||||||||||||||||||||||||    
T  2100 tcacctcaaagtagttgaattccctcaaaacattacattcc 2060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 364
Target Start/End: Original strand, 4484 - 4540
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    |||||||||||| |||||||| |||| ||||| |||| ||||||||||||| |||||    
T  4484 atccaaacaatggaattcaccccaaaatatttgaatttcctcaaaacattatattcc 4540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 364
Target Start/End: Original strand, 5128 - 5184
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    |||||||||||| |||||||| |||| ||||| |||| ||||||||||||| |||||    
T  5128 atccaaacaatggaattcaccccaaaatatttgaatttcctcaaaacattatattcc 5184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 364
Target Start/End: Complemental strand, 7238 - 7182
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    |||||||||||| |||||||  |||||||||| |||||||| |||||| ||||||||    
T  7238 atccaaacaatggaattcactccaaagtatttgaattcccttaaaacaatacattcc 7182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 198 - 245
Target Start/End: Complemental strand, 7688 - 7641
Alignment:
Q  198 atgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 245  Q
    |||||||||||   ||||||||||||||||| ||||||||||||||||    
T  7688 atgaggtaattgagaaattttaaagaatttagaattctaggcaattta 7641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 33; Significance: 0.000000002; HSPs: 3)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 312 - 364
Target Start/End: Complemental strand, 19280 - 19229
Alignment:
Q  312 aaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    |||||||| ||||||||||||| ||||| |||| |||||||||||||||||||    
T  19280 aaacaatggaattcacctcaaaatatttgaatt-cctcaaaacattacattcc 19229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 245
Target Start/End: Original strand, 19326 - 19367
Alignment:
Q  204 taatttgaaaattttaaagaatttaaaattctaggcaattta 245  Q
    ||||||| ||||||||||||||||| |||| |||||||||||    
T  19326 taatttggaaattttaaagaatttagaattttaggcaattta 19367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 364
Target Start/End: Original strand, 19779 - 19827
Alignment:
Q  316 aatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    |||| ||||||||||||||||||| ||||  || |||||||||||||||    
T  19779 aatgtaattcacctcaaagtatttgaattttcttaaaacattacattcc 19827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 324 - 364
Target Start/End: Complemental strand, 56345 - 56305
Alignment:
Q  324 tcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    ||||||||||||| || ||||||||||||||||||||||||    
T  56345 tcacctcaaagtagttgaattccctcaaaacattacattcc 56305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 364
Target Start/End: Original strand, 56349 - 56402
Alignment:
Q  311 caaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    ||||||||  ||||||||| |||||| || ||||||||||||||||||| ||||    
T  56349 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattactttcc 56402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 321 - 364
Target Start/End: Complemental strand, 83017 - 82974
Alignment:
Q  321 aattcacctcaaagtatttaaattccctcaaaacattacattcc 364  Q
    ||||||||| |||||| || ||||||||||||||||||||||||    
T  83017 aattcaccttaaagtagttgaattccctcaaaacattacattcc 82974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 361
Target Start/End: Complemental strand, 130442 - 130388
Alignment:
Q  307 catccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacat 361  Q
    ||||||||||||  ||| ||||| ||||| ||| |||||||||||||||||||||    
T  130442 catccaaacaatagaatccacctaaaagtctttgaattccctcaaaacattacat 130388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 308 - 353
Target Start/End: Original strand, 9572 - 9617
Alignment:
Q  308 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaa 353  Q
    |||||||||||| |||| |||||||||||||| ||||| |||||||    
T  9572 atccaaacaatggaatttacctcaaagtatttgaattctctcaaaa 9617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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