View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20403_high_2 (Length: 304)
Name: NF20403_high_2
Description: NF20403
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20403_high_2 |
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Alignment Details
Target: chr8 (Bit Score: 245; Significance: 1e-136; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 11 - 288
Target Start/End: Original strand, 35104544 - 35104820
Alignment:
| Q |
11 |
atgaaggtgtaggtggtctttgtttatagtatggccaccgttgaaagaagactttaagtgcacgtaagaggtactggttgtggtgttatgagaatatata |
110 |
Q |
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| T |
35104544 |
atgaaggtgtaggtggtctttgtttatagtatggccaccgttgaaagaagactttaagtgcacgtaagaggtactggttgtggtgttatgagaatata-a |
35104642 |
T |
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| Q |
111 |
gcctaactagaggtggtcttgcagctctaaagttgaaagtagatgttacattattttaagaaaccaaattagtttattaaaattgaggttagaaaaaatt |
210 |
Q |
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| T |
35104643 |
gcctaactagaggtggtcttgcagctctaaagttgaaagtagatgttacattattttaagaaaccaaattagtctattaaaattgaggttagaaaaaatt |
35104742 |
T |
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| Q |
211 |
gaatttaagacttgacatgatcctacgttatatcaacnnnnnnntttagattgaataacaaaattatgttcctatcat |
288 |
Q |
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| T |
35104743 |
gaatttaagacttgacatgatcctacgttatatcaacaaaaaaatttagattgaataacaaaattatgttcctatcat |
35104820 |
T |
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