View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20405_high_6 (Length: 236)
Name: NF20405_high_6
Description: NF20405
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20405_high_6 |
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Alignment Details
Target: chr5 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 10521750 - 10521969
Alignment:
| Q |
1 |
cactccctgctatgtaacaacgcatcttgtatatatataggaacaacaatcatactattgccacacttcacctactggaatcacacttgtataatacaat |
100 |
Q |
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| T |
10521750 |
cactccctgctatgtaacaacgcatcttgtatatatataggaacaacaatcatgctattgccacacttcacctactggaatcacacttgtataatacaat |
10521849 |
T |
|
| Q |
101 |
ctccagaccagcatctactagaaatgcaattgcagatgaaaatcgatctctgcaattgcggctcactaatccagccggattctcttacctcttaccaaaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
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| T |
10521850 |
ctccagaccagcatctactagaaatgcaattgcagatgaaaatcgatctctgcaattgcggctcactaatcctgccggattctcttacctcttaccaaaa |
10521949 |
T |
|
| Q |
201 |
ctcctgaaagttaaagaacc |
220 |
Q |
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|||||||||||||||||||| |
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| T |
10521950 |
ctcctgaaagttaaagaacc |
10521969 |
T |
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