View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20406_low_13 (Length: 249)

Name: NF20406_low_13
Description: NF20406
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20406_low_13
NF20406_low_13
[»] chr1 (43 HSPs)
chr1 (13-243)||(4266384-4266614)
chr1 (13-241)||(38913745-38913973)
chr1 (13-239)||(34888686-34888912)
chr1 (13-240)||(2951365-2951592)
chr1 (27-240)||(1231813-1232026)
chr1 (13-215)||(50151063-50151265)
chr1 (13-239)||(9216034-9216260)
chr1 (13-239)||(7333947-7334173)
chr1 (13-239)||(23482707-23482933)
chr1 (21-234)||(35614078-35614291)
chr1 (13-240)||(18706508-18706734)
chr1 (13-240)||(38444634-38444861)
chr1 (13-239)||(52687114-52687339)
chr1 (85-239)||(31018200-31018354)
chr1 (13-239)||(18855233-18855458)
chr1 (85-237)||(50326076-50326228)
chr1 (13-199)||(39727983-39728169)
chr1 (21-200)||(35614827-35615005)
chr1 (21-196)||(19764593-19764768)
chr1 (145-241)||(29942153-29942249)
chr1 (13-144)||(2590338-2590468)
chr1 (13-148)||(19768467-19768602)
chr1 (122-206)||(5061335-5061419)
chr1 (192-239)||(52957058-52957105)
chr1 (174-228)||(29387898-29387952)
chr1 (178-239)||(14009849-14009914)
chr1 (179-235)||(36465864-36465920)
chr1 (13-56)||(1231725-1231768)
chr1 (196-239)||(2590466-2590509)
chr1 (13-56)||(2951636-2951679)
chr1 (13-56)||(4266297-4266340)
chr1 (13-56)||(18706773-18706816)
chr1 (13-56)||(19764814-19764857)
chr1 (13-56)||(19768382-19768425)
chr1 (204-239)||(21219660-21219695)
chr1 (13-56)||(23482972-23483015)
chr1 (13-56)||(35613984-35614027)
chr1 (13-56)||(35614734-35614777)
chr1 (13-56)||(38914017-38914060)
chr1 (13-56)||(52036310-52036353)
chr1 (174-228)||(28947465-28947519)
chr1 (13-53)||(7333863-7333903)
chr1 (203-239)||(26497649-26497685)
[»] chr5 (42 HSPs)
chr5 (13-246)||(34110655-34110888)
chr5 (13-241)||(20874691-20874919)
chr5 (13-239)||(34107338-34107564)
chr5 (13-239)||(38246865-38247091)
chr5 (13-239)||(16526306-16526532)
chr5 (13-239)||(10729442-10729668)
chr5 (13-240)||(17373160-17373390)
chr5 (13-239)||(2398942-2399166)
chr5 (13-241)||(20655047-20655275)
chr5 (13-204)||(33570342-33570533)
chr5 (13-248)||(33375765-33376002)
chr5 (13-228)||(1395992-1396207)
chr5 (13-239)||(5479199-5479425)
chr5 (13-192)||(14141154-14141333)
chr5 (13-228)||(25099247-25099462)
chr5 (13-228)||(25158337-25158552)
chr5 (13-200)||(27647933-27648120)
chr5 (21-221)||(24223182-24223382)
chr5 (89-243)||(40177120-40177274)
chr5 (13-203)||(29275627-29275817)
chr5 (13-197)||(6940545-6940729)
chr5 (13-184)||(1394541-1394712)
chr5 (13-176)||(17913744-17913907)
chr5 (174-240)||(8179752-8179818)
chr5 (174-228)||(30096287-30096341)
chr5 (174-225)||(30088716-30088767)
chr5 (13-56)||(1395907-1395950)
chr5 (13-56)||(2399210-2399253)
chr5 (13-56)||(5479115-5479158)
chr5 (13-56)||(6940768-6940811)
chr5 (13-56)||(10729712-10729755)
chr5 (13-56)||(14141377-14141420)
chr5 (13-56)||(16526577-16526620)
chr5 (13-56)||(17373434-17373477)
chr5 (13-56)||(20874604-20874647)
chr5 (13-56)||(24223434-24223477)
chr5 (13-56)||(27647845-27647888)
chr5 (13-56)||(33570578-33570621)
chr5 (13-56)||(34107608-34107651)
chr5 (13-56)||(34110566-34110609)
chr5 (13-56)||(38247135-38247178)
chr5 (13-56)||(40177033-40177076)
[»] chr2 (31 HSPs)
chr2 (13-242)||(41664513-41664742)
chr2 (13-243)||(41663240-41663470)
chr2 (13-239)||(6120555-6120781)
chr2 (13-239)||(18351554-18351780)
chr2 (13-240)||(44902085-44902311)
chr2 (21-239)||(19596363-19596581)
chr2 (13-239)||(20544828-20545054)
chr2 (13-239)||(8700264-8700490)
chr2 (13-242)||(42441963-42442196)
chr2 (13-237)||(31424012-31424236)
chr2 (13-237)||(26231261-26231485)
chr2 (13-240)||(42055202-42055429)
chr2 (13-239)||(36279455-36279680)
chr2 (86-239)||(27944796-27944949)
chr2 (13-239)||(34007714-34007935)
chr2 (13-208)||(999262-999457)
chr2 (23-198)||(16214837-16215012)
chr2 (85-214)||(692227-692356)
chr2 (174-243)||(2988885-2988954)
chr2 (13-56)||(19596634-19596677)
chr2 (180-243)||(25889035-25889097)
chr2 (179-228)||(31572450-31572499)
chr2 (13-56)||(6120467-6120510)
chr2 (13-56)||(16214741-16214784)
chr2 (13-56)||(18351467-18351510)
chr2 (13-56)||(26231527-26231570)
chr2 (13-56)||(31423924-31423967)
chr2 (13-56)||(34007980-34008023)
chr2 (13-56)||(41663152-41663195)
chr2 (13-56)||(42441876-42441919)
chr2 (189-239)||(22139561-22139611)
[»] chr8 (54 HSPs)
chr8 (13-241)||(15961135-15961363)
chr8 (13-239)||(30473884-30474110)
chr8 (13-240)||(6299019-6299246)
chr8 (13-244)||(10477940-10478171)
chr8 (13-239)||(18997703-18997929)
chr8 (13-239)||(32110861-32111087)
chr8 (13-239)||(44832186-44832412)
chr8 (13-239)||(995815-996041)
chr8 (13-239)||(18175384-18175610)
chr8 (13-239)||(11725193-11725419)
chr8 (14-239)||(28582859-28583084)
chr8 (13-240)||(18841907-18842134)
chr8 (21-240)||(35122321-35122540)
chr8 (13-216)||(40026803-40027006)
chr8 (13-239)||(24408879-24409105)
chr8 (13-215)||(39257446-39257648)
chr8 (13-234)||(11142464-11142691)
chr8 (13-237)||(18568868-18569092)
chr8 (13-237)||(28274217-28274440)
chr8 (21-240)||(44836920-44837139)
chr8 (45-239)||(39997726-39997920)
chr8 (13-207)||(18210656-18210850)
chr8 (13-190)||(19240666-19240843)
chr8 (13-190)||(19313850-19314027)
chr8 (13-200)||(19412834-19413022)
chr8 (13-187)||(24004779-24004953)
chr8 (13-128)||(23353688-23353803)
chr8 (13-207)||(25875322-25875525)
chr8 (181-243)||(23353618-23353680)
chr8 (13-70)||(18481929-18481986)
chr8 (174-228)||(405365-405419)
chr8 (192-239)||(19241008-19241055)
chr8 (192-239)||(19314192-19314239)
chr8 (13-56)||(39997665-39997708)
chr8 (13-56)||(6299290-6299333)
chr8 (13-56)||(10477853-10477896)
chr8 (13-56)||(11142381-11142424)
chr8 (13-56)||(11725106-11725149)
chr8 (13-56)||(18175297-18175340)
chr8 (13-56)||(18997616-18997659)
chr8 (13-56)||(19240580-19240623)
chr8 (13-56)||(19313764-19313807)
chr8 (13-56)||(19412752-19412795)
chr8 (13-56)||(23353846-23353889)
chr8 (13-56)||(24408795-24408838)
chr8 (13-56)||(30474153-30474196)
chr8 (13-56)||(32111131-32111174)
chr8 (13-56)||(35122585-35122628)
chr8 (13-56)||(39997580-39997623)
chr8 (13-56)||(44832457-44832500)
chr8 (13-56)||(44836824-44836867)
chr8 (14-56)||(18210893-18210935)
chr8 (198-240)||(34815244-34815286)
chr8 (203-243)||(11071957-11071997)
[»] chr4 (45 HSPs)
chr4 (13-248)||(52434627-52434863)
chr4 (13-240)||(30824921-30825148)
chr4 (13-239)||(16917888-16918114)
chr4 (13-239)||(53143262-53143488)
chr4 (13-240)||(37651669-37651896)
chr4 (13-242)||(12090456-12090686)
chr4 (14-239)||(16904952-16905177)
chr4 (13-239)||(31965969-31966195)
chr4 (13-242)||(33139468-33139697)
chr4 (13-237)||(46256037-46256261)
chr4 (13-228)||(44376090-44376305)
chr4 (13-239)||(37590804-37591030)
chr4 (14-239)||(35760585-35760810)
chr4 (13-239)||(41387129-41387355)
chr4 (13-240)||(48118533-48118757)
chr4 (21-239)||(47142800-47143018)
chr4 (13-237)||(45976992-45977216)
chr4 (13-239)||(39058357-39058583)
chr4 (13-216)||(31628510-31628713)
chr4 (13-215)||(52098214-52098417)
chr4 (13-190)||(45782478-45782655)
chr4 (13-216)||(54624960-54625156)
chr4 (13-177)||(50229768-50229933)
chr4 (145-199)||(50229712-50229766)
chr4 (85-132)||(34684603-34684650)
chr4 (198-239)||(18209699-18209740)
chr4 (13-56)||(12090730-12090773)
chr4 (13-56)||(16905218-16905261)
chr4 (13-56)||(16918158-16918201)
chr4 (200-239)||(26724134-26724173)
chr4 (13-56)||(30825192-30825235)
chr4 (13-56)||(31966239-31966282)
chr4 (13-56)||(39058622-39058665)
chr4 (13-56)||(45977264-45977307)
chr4 (13-56)||(47143070-47143113)
chr4 (13-56)||(48118802-48118845)
chr4 (13-56)||(52098460-52098503)
chr4 (13-56)||(52434540-52434583)
chr4 (13-56)||(53143534-53143577)
chr4 (13-56)||(54624879-54624922)
chr4 (174-239)||(22289955-22290020)
chr4 (174-219)||(35903633-35903678)
chr4 (180-228)||(19745228-19745276)
chr4 (180-228)||(19794530-19794578)
chr4 (13-53)||(50229979-50230019)
[»] chr7 (37 HSPs)
chr7 (13-240)||(38163338-38163565)
chr7 (13-239)||(21804572-21804798)
chr7 (13-239)||(42242154-42242380)
chr7 (13-239)||(3840641-3840867)
chr7 (13-243)||(27138524-27138754)
chr7 (13-239)||(33916947-33917173)
chr7 (13-239)||(31373459-31373685)
chr7 (13-240)||(21341826-21342053)
chr7 (13-241)||(21669984-21670212)
chr7 (13-243)||(17178233-17178464)
chr7 (13-239)||(16376545-16376771)
chr7 (13-244)||(21656631-21656862)
chr7 (13-243)||(13786173-13786403)
chr7 (13-239)||(40968894-40969120)
chr7 (13-225)||(24924082-24924294)
chr7 (13-237)||(43933546-43933770)
chr7 (13-239)||(15109665-15109891)
chr7 (13-239)||(27903417-27903643)
chr7 (13-207)||(21753524-21753718)
chr7 (45-215)||(39030276-39030446)
chr7 (13-58)||(31096703-31096748)
chr7 (13-56)||(15109930-15109973)
chr7 (179-228)||(31097881-31097930)
chr7 (13-56)||(3840912-3840955)
chr7 (13-56)||(16376812-16376855)
chr7 (13-56)||(17178508-17178551)
chr7 (13-56)||(21341737-21341780)
chr7 (13-56)||(21656547-21656590)
chr7 (13-56)||(21669895-21669938)
chr7 (13-56)||(21804842-21804885)
chr7 (13-56)||(27138798-27138841)
chr7 (13-56)||(31373370-31373413)
chr7 (13-56)||(33917217-33917260)
chr7 (13-56)||(42242424-42242467)
chr7 (174-227)||(32661033-32661086)
chr7 (13-54)||(43933815-43933856)
chr7 (16-56)||(24924001-24924041)
[»] chr3 (45 HSPs)
chr3 (13-244)||(43363606-43363837)
chr3 (13-240)||(49672565-49672792)
chr3 (13-239)||(12264203-12264429)
chr3 (13-239)||(38653927-38654153)
chr3 (13-240)||(21098307-21098534)
chr3 (13-240)||(34121358-34121585)
chr3 (13-239)||(1941720-1941946)
chr3 (13-240)||(3898425-3898652)
chr3 (13-239)||(49506349-49506575)
chr3 (13-239)||(54073030-54073259)
chr3 (13-241)||(26948801-26949029)
chr3 (13-239)||(4584434-4584660)
chr3 (13-239)||(20671252-20671478)
chr3 (13-239)||(36076454-36076680)
chr3 (13-237)||(31488414-31488638)
chr3 (13-237)||(39146443-39146667)
chr3 (13-239)||(45557884-45558110)
chr3 (13-239)||(49478211-49478437)
chr3 (55-240)||(40014652-40014837)
chr3 (13-234)||(55041588-55041815)
chr3 (13-197)||(24119210-24119394)
chr3 (85-207)||(26051334-26051457)
chr3 (133-239)||(6460168-6460273)
chr3 (13-77)||(26052240-26052304)
chr3 (174-243)||(5189783-5189852)
chr3 (179-228)||(37099713-37099762)
chr3 (185-241)||(13364020-13364076)
chr3 (13-56)||(1941990-1942033)
chr3 (13-56)||(3898338-3898381)
chr3 (13-56)||(12264115-12264158)
chr3 (13-56)||(20671166-20671209)
chr3 (13-56)||(21098219-21098262)
chr3 (13-56)||(26052349-26052392)
chr3 (13-56)||(26948689-26948732)
chr3 (13-56)||(31488329-31488372)
chr3 (13-56)||(34121271-34121314)
chr3 (13-56)||(38654198-38654241)
chr3 (13-56)||(43363881-43363924)
chr3 (13-56)||(49478124-49478167)
chr3 (13-56)||(49672478-49672521)
chr3 (13-56)||(55041858-55041901)
chr3 (192-242)||(926210-926260)
chr3 (185-243)||(23210336-23210394)
chr3 (186-244)||(46921419-46921477)
chr3 (13-54)||(36076723-36076764)
[»] scaffold0031 (1 HSPs)
scaffold0031 (13-239)||(46277-46503)
[»] chr6 (34 HSPs)
chr6 (13-239)||(12597265-12597491)
chr6 (13-237)||(19997668-19997892)
chr6 (13-240)||(33645945-33646172)
chr6 (13-240)||(28099596-28099823)
chr6 (13-239)||(2266771-2267005)
chr6 (14-240)||(13533771-13533997)
chr6 (13-239)||(17202435-17202661)
chr6 (13-241)||(15044725-15044953)
chr6 (13-239)||(3592896-3593122)
chr6 (13-239)||(10584728-10584954)
chr6 (13-241)||(2005431-2005659)
chr6 (13-172)||(17594819-17594979)
chr6 (13-136)||(8539603-8539726)
chr6 (13-137)||(25448752-25448876)
chr6 (114-239)||(1405563-1405688)
chr6 (100-203)||(33035523-33035626)
chr6 (180-244)||(8539723-8539787)
chr6 (174-239)||(6300709-6300774)
chr6 (174-239)||(6307519-6307584)
chr6 (174-228)||(8657075-8657129)
chr6 (198-239)||(162669-162710)
chr6 (189-242)||(2965456-2965509)
chr6 (197-242)||(14986388-14986433)
chr6 (189-237)||(25342639-25342687)
chr6 (13-56)||(2266684-2266727)
chr6 (13-56)||(10584996-10585039)
chr6 (13-56)||(12597535-12597578)
chr6 (13-56)||(15044639-15044682)
chr6 (13-56)||(17202348-17202391)
chr6 (13-56)||(17594733-17594776)
chr6 (13-56)||(19997580-19997623)
chr6 (13-56)||(28099868-28099911)
chr6 (13-56)||(33645858-33645901)
chr6 (198-239)||(24165091-24165132)
[»] scaffold0022 (2 HSPs)
scaffold0022 (13-240)||(149049-149276)
scaffold0022 (13-56)||(149318-149361)
[»] scaffold0173 (1 HSPs)
scaffold0173 (13-239)||(19350-19576)
[»] scaffold0836 (1 HSPs)
scaffold0836 (87-239)||(5278-5430)
[»] scaffold0515 (1 HSPs)
scaffold0515 (87-239)||(6061-6213)
[»] scaffold0306 (1 HSPs)
scaffold0306 (87-239)||(6071-6223)
[»] scaffold0896 (1 HSPs)
scaffold0896 (174-228)||(1081-1135)


Alignment Details
Target: chr1 (Bit Score: 198; Significance: 1e-108; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 13 - 243
Target Start/End: Original strand, 4266384 - 4266614
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||    
T  4266384 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 4266483  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccg 212  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  4266484 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgacccg 4266583  T
Q  213 tgcggcagcacgggtgaaaagtctagtatat 243  Q
    |||||||||||||||| ||||||||||||||    
T  4266584 tgcggcagcacgggtggaaagtctagtatat 4266614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 13 - 241
Target Start/End: Complemental strand, 38913973 - 38913745
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||    
T  38913973 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 38913874  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccg 212  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  38913873 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgacccg 38913774  T
Q  213 tgcggcagcacgggtgaaaagtctagtat 241  Q
    |||||||||||||||| ||||||||||||    
T  38913773 tgcggcagcacgggtggaaagtctagtat 38913745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 13 - 239
Target Start/End: Complemental strand, 34888912 - 34888686
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||    
T  34888912 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 34888813  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccg 212  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  34888812 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgacccg 34888713  T
Q  213 tgcggcagcacgggtgaaaagtctagt 239  Q
    |||||||||||||||| ||||||||||    
T  34888712 tgcggcagcacgggtggaaagtctagt 34888686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 13 - 240
Target Start/End: Complemental strand, 2951592 - 2951365
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||    
T  2951592 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 2951493  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccg 212  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||| || ||||| |||||||||||||| |||    
T  2951492 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttttttttgtttattatatttacaatgtatatgacccg 2951393  T
Q  213 tgcggcagcacgggtgaaaagtctagta 240  Q
    |||||||||||||||| |||||||||||    
T  2951392 tgcggcagcacgggtggaaagtctagta 2951365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 27 - 240
Target Start/End: Original strand, 1231813 - 1232026
Alignment:
Q  27 atataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaacatctg 126  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||    
T  1231813 atataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcgaattccaacatctg 1231912  T
Q  127 catatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccgtgcggcagcacggg 226  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  1231913 catatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatttacaatgtatatgacccgtgcggcagcacggg 1232012  T
Q  227 tgaaaagtctagta 240  Q
    || |||||||||||    
T  1232013 tggaaagtctagta 1232026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 13 - 215
Target Start/End: Original strand, 50151063 - 50151265
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||    
T  50151063 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 50151162  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccg 212  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  50151163 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgacccg 50151262  T
Q  213 tgc 215  Q
    |||    
T  50151263 tgc 50151265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 13 - 239
Target Start/End: Original strand, 9216034 - 9216260
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||       ||| |||||| |||||||||||||||||    
T  9216034 aatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtaaataagtgtggtgtctgaggttcg 9216133  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccg 212  Q
    ||||||||||||||||||||||||||||||||| ||| ||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||    
T  9216134 aattccaacatctgcatatatttgggaccacatgttttattctctttgatatgcattgagatttgtttttatctactatatctacaatgtatatgacccg 9216233  T
Q  213 tgcggcagcacgggtgaaaagtctagt 239  Q
    |||||||||||||||| ||||||||||    
T  9216234 tgcggcagcacgggtggaaagtctagt 9216260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 13 - 239
Target Start/End: Original strand, 7333947 - 7334173
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||| ||||||||||||||| |    
T  7333947 aatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttatggtgaataagtgtggtgtctgaggtttg 7334046  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccg 212  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| |||||| || ||||| | |||    
T  7334047 aattccaacatctgcatatatttgggaccacatattttattctctttgatatgcattgagatttgtttttgtctactacatctaccatctatataacccg 7334146  T
Q  213 tgcggcagcacgggtgaaaagtctagt 239  Q
    ||| |||||||||||||||||||||||    
T  7334147 tgcagcagcacgggtgaaaagtctagt 7334173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 13 - 239
Target Start/End: Complemental strand, 23482933 - 23482707
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||| ||||||| |||||||||    
T  23482933 aatataacgttgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttcaggtgaataagtgtggtgtatgaggttcg 23482834  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccg 212  Q
    ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||| ||||||||||| |||||||||||||||||  ||    
T  23482833 aattccaacatctgcatatatttgggaccacatatttcatgctctttgatatgcattgagatttgtatttgtctactacatctacaatgtatatgactcg 23482734  T
Q  213 tgcggcagcacgggtgaaaagtctagt 239  Q
    |||||||||||||||| ||||||||||    
T  23482733 tgcggcagcacgggtggaaagtctagt 23482707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 21 - 234
Target Start/End: Original strand, 35614078 - 35614291
Alignment:
Q  21 attgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaa 120  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||| ||||||||| | |||||||||||||    
T  35614078 attgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttcaggtgaataagtgtggtgtcttaagttcgaattccaa 35614177  T
Q  121 catctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccgtgcggcag 220  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| || |||||||||||||| |||||||| ||    
T  35614178 catctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatttacaatgtatatgacccgtgcggtag 35614277  T
Q  221 cacgggtgaaaagt 234  Q
    |||||||| |||||    
T  35614278 cacgggtggaaagt 35614291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 13 - 240
Target Start/End: Complemental strand, 18706734 - 18706508
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    |||||||  ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||       |||||||||| ||||||| |||||||||    
T  18706734 aatataacgttgacatataattttaacaaaagaatgaagttacacacgattgataaaaattaatatttttcaggtgaataagtgtggtgtatgaggttcg 18706635  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccg 212  Q
    ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| |||||||||||||||||||| |||||||||||||||||  ||    
T  18706634 aattccaacatctgcatatatttgg-accacatatttcattctctttgatatgcattaagatttgtttttgtctactacatctacaatgtatatgactcg 18706536  T
Q  213 tgcggcagcacgggtgaaaagtctagta 240  Q
    |||||||||||||||| |||||||||||    
T  18706535 tgcggcagcacgggtggaaagtctagta 18706508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 13 - 240
Target Start/End: Original strand, 38444634 - 38444861
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    ||||||| ||||||||||||||||| ||||||||||||||||||||  |||||||||||||||||       |||||||||| ||||||||||| |||||    
T  38444634 aatataacattgacatataattttatcaaaagaatgaagtaacacattattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaagttcg 38444733  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccg 212  Q
    |||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||     
T  38444734 aatttcaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatgaccca 38444833  T
Q  213 tgcggcagcacgggtgaaaagtctagta 240  Q
    ||||||| |||||||| |||||||||||    
T  38444834 tgcggcatcacgggtggaaagtctagta 38444861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 13 - 239
Target Start/End: Complemental strand, 52687339 - 52687114
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    ||||||| |||||||||||||||||| |||| |||||||||||||||||||||||||||||||||       |||||||||| ||||||| |||||||||    
T  52687339 aatataacattgacatataattttaataaaaaaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgt-tgaggttcg 52687241  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccg 212  Q
     |||||||||||||||||||||||||||||||||||||||| ||||| ||| |||||||||||||||||||| ||||| ||||||||||||||||| |||    
T  52687240 gattccaacatctgcatatatttgggaccacatatttcattctctttcataggcattgagatttgtttttgtatactacatctacaatgtatatgacccg 52687141  T
Q  213 tgcggcagcacgggtgaaaagtctagt 239  Q
    |||| ||||||||||| ||||||||||    
T  52687140 tgcgacagcacgggtggaaagtctagt 52687114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 85 - 239
Target Start/End: Complemental strand, 31018354 - 31018200
Alignment:
Q  85 ggtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgt 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  31018354 ggtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt 31018255  T
Q  185 ctactatatctacaatgtatatgatccgtgcggcagcacgggtgaaaagtctagt 239  Q
    |||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  31018254 ctactatatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagt 31018200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 13 - 239
Target Start/End: Complemental strand, 18855458 - 18855233
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    ||||||| |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||       |||||||||| |||||||||||||||||    
T  18855458 aatataacattgacatataattttaacaaaagaatgaagtaatacatgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcg 18855359  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccg 212  Q
    |||| |||||||| ||||||||||||||||||| ||| ||| |||||||||||||||||||||||  ||||||||||  ||||||||||||||||| |||    
T  18855358 aatttcaacatctacatatatttgggaccacatgttttattctctttgatatgcattgagatttg-atttgtctactgcatctacaatgtatatgacccg 18855260  T
Q  213 tgcggcagcacgggtgaaaagtctagt 239  Q
    |||||||||||||||| ||||||||||    
T  18855259 tgcggcagcacgggtggaaagtctagt 18855233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 85 - 237
Target Start/End: Original strand, 50326076 - 50326228
Alignment:
Q  85 ggtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgt 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  50326076 ggtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt 50326175  T
Q  185 ctactatatctacaatgtatatgatccgtgcggcagcacgggtgaaaagtcta 237  Q
    |||||||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  50326176 ctactatatctacaatgtatatgacccgtgcggcagcacgggtggaaagtcta 50326228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 13 - 199
Target Start/End: Original strand, 39727983 - 39728169
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||       |||||||||| |||||||||||||||||    
T  39727983 aatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcg 39728082  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaa 199  Q
    ||||||||||||||||||||||||||||||||| ||| ||| |||||||||||||||||||||||||||||||||||| ||||||||    
T  39728083 aattccaacatctgcatatatttgggaccacatgttttattctctttgatatgcattgagatttgtttttgtctactacatctacaa 39728169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 21 - 200
Target Start/End: Original strand, 35614827 - 35615005
Alignment:
Q  21 attgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaa 120  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||| |||||| |||||||||||||||||||||||||    
T  35614827 attgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatattttaa-ggtaaataagtgtggtgtctgaggttcgaattccaa 35614925  T
Q  121 catctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaat 200  Q
    |||||||||||||||| |||||||||||||||| ||||||||||||||| |||||||||||||||||||| || ||||||    
T  35614926 catctgcatatatttgagaccacatatttcattctctttgatatgcattaagatttgtttttgtctactacatttacaat 35615005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 21 - 196
Target Start/End: Complemental strand, 19764768 - 19764593
Alignment:
Q  21 attgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaa 120  Q
    |||||||| |||||||||||||| ||||||||||||||||||| |||||||||||||       |||||||||| |||||||||||||||||||||| ||    
T  19764768 attgacatgtaattttaacaaaataatgaagtaacacacgattcataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcgaattcaaa 19764669  T
Q  121 catctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatcta 196  Q
    ||| ||||||||||||||||||||||||||||| | ||| |||||||||||||||||||||||| ||||| |||||    
T  19764668 catttgcatatatttgggaccacatatttcattctttttaatatgcattgagatttgtttttgtatactacatcta 19764593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 145 - 241
Target Start/End: Original strand, 29942153 - 29942249
Alignment:
Q  145 tatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccgtgcggcagcacgggtgaaaagtctagtat 241  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  29942153 tatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagtat 29942249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 13 - 144
Target Start/End: Original strand, 2590338 - 2590468
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||       |||||||||| ||||||||||||||| |    
T  2590338 aatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggtt-g 2590436  T
Q  113 aattccaacatctgcatatatttgggaccaca 144  Q
    ||||| ||||||||||||||||||| ||||||    
T  2590437 aattcgaacatctgcatatatttggaaccaca 2590468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 13 - 148
Target Start/End: Original strand, 19768467 - 19768602
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||       | |||||||| |||||||||||||||||    
T  19768467 aatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttaagatgaataagtgtggtgtctgaggttcg 19768566  T
Q  113 aattccaacatctgcatatatttgggaccacatatt 148  Q
    || | |||||||| ||| ||||||| ||||||||||    
T  19768567 aaattcaacatctacatgtatttggaaccacatatt 19768602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 122 - 206
Target Start/End: Original strand, 5061335 - 5061419
Alignment:
Q  122 atctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatat 206  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  5061335 atctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatat 5061419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 192 - 239
Target Start/End: Original strand, 52957058 - 52957105
Alignment:
Q  192 atctacaatgtatatgatccgtgcggcagcacgggtgaaaagtctagt 239  Q
    ||||||||||||||||| ||||||||||||||||||| | ||||||||    
T  52957058 atctacaatgtatatgacccgtgcggcagcacgggtggagagtctagt 52957105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 174 - 228
Target Start/End: Complemental strand, 29387952 - 29387898
Alignment:
Q  174 tttgtttttgtctactatatctacaatgtatatgatccgtgcggcagcacgggtg 228  Q
    ||||||||||||||||| |  |||||||||||||| ||||||||||| |||||||    
T  29387952 tttgtttttgtctactacacttacaatgtatatgacccgtgcggcagtacgggtg 29387898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 178 - 239
Target Start/End: Original strand, 14009849 - 14009914
Alignment:
Q  178 tttttgtctactatatctacaatgtatatgatccgtgcggca----gcacgggtgaaaagtctagt 239  Q
    ||||||||||||| || |||||| ||||||| ||||||||||    ||||||||||||||||||||    
T  14009849 tttttgtctactacatttacaatttatatgacccgtgcggcagcacgcacgggtgaaaagtctagt 14009914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 235
Target Start/End: Original strand, 36465864 - 36465920
Alignment:
Q  179 ttttgtctactatatctacaatgtatatgatccgtgcggcagcacgggtgaaaagtc 235  Q
    ||||||| ||||||| ||||  |||||||| | ||||||||||||||||||||||||    
T  36465864 ttttgtcaactatatttacaccgtatatgacctgtgcggcagcacgggtgaaaagtc 36465920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 1231725 - 1231768
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  1231725 aatataacattaacatataatttttacaaaagaatgaagtaaca 1231768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 2590466 - 2590509
Alignment:
Q  196 acaatgtatatgatccgtgcggcagcacgggtgaaaagtctagt 239  Q
    |||||||||||||  |||||||||||||||||| ||||||||||    
T  2590466 acaatgtatatgactcgtgcggcagcacgggtggaaagtctagt 2590509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 2951679 - 2951636
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  2951679 aatataacattaacatataatttttacaaaagaatgaagtaaca 2951636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 4266297 - 4266340
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  4266297 aatataacattaacatataatttttacaaaagaatgaagtaaca 4266340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 18706816 - 18706773
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  18706816 aatataacattaacatataatttttacaaaagaatgaagtaaca 18706773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 19764857 - 19764814
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  19764857 aatataacattaacatataatttttacaaaagaatgaagtaaca 19764814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 19768382 - 19768425
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  19768382 aatataacattaacatataatttttacaaaagaatgaagtaaca 19768425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 204 - 239
Target Start/End: Complemental strand, 21219695 - 21219660
Alignment:
Q  204 tatgatccgtgcggcagcacgggtgaaaagtctagt 239  Q
    ||||||||||||||||||||||||||| ||||||||    
T  21219695 tatgatccgtgcggcagcacgggtgaatagtctagt 21219660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 23483015 - 23482972
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  23483015 aatataacattaacatataatttttacaaaagaatgaagtaaca 23482972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 35613984 - 35614027
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  35613984 aatataaaattaacatataatttttacaaaagaatgaagtaaca 35614027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 35614734 - 35614777
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  35614734 aatataacattaacatataatttttacaaaagaatgaagtaaca 35614777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 38914060 - 38914017
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  38914060 aatataacattaacatataatttttacaaaagaatgaagtaaca 38914017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 52036353 - 52036310
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  52036353 aatataacattaacatataatttttacaaaagaatgaagtaaca 52036310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 228
Target Start/End: Complemental strand, 28947519 - 28947465
Alignment:
Q  174 tttgtttttgtctactatatctacaatgtatatgatccgtgcggcagcacgggtg 228  Q
    |||| |||||||||||| |  || ||||||||||| |||||||||||||||||||    
T  28947519 tttgcttttgtctactacacttataatgtatatgacccgtgcggcagcacgggtg 28947465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 7333863 - 7333903
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagta 53  Q
    ||||||| ||| |||||||||||| ||||||||||||||||    
T  7333863 aatataacattaacatataatttttacaaaagaatgaagta 7333903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 239
Target Start/End: Original strand, 26497649 - 26497685
Alignment:
Q  203 atatgatccgtgcggcagcacgggtgaaaagtctagt 239  Q
    |||||| ||||||||||||||||||| ||||||||||    
T  26497649 atatgacccgtgcggcagcacgggtgcaaagtctagt 26497685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 197; Significance: 1e-107; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 13 - 246
Target Start/End: Original strand, 34110655 - 34110888
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||    
T  34110655 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 34110754  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccg 212  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  34110755 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgacccg 34110854  T
Q  213 tgcggcagcacgggtgaaaagtctagtatattta 246  Q
    |||||||||||||||| |||||||||||| ||||    
T  34110855 tgcggcagcacgggtggaaagtctagtatgttta 34110888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 13 - 241
Target Start/End: Original strand, 20874691 - 20874919
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||    
T  20874691 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 20874790  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccg 212  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  20874791 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgacccg 20874890  T
Q  213 tgcggcagcacgggtgaaaagtctagtat 241  Q
    |||||||||||||||| ||||||||||||    
T  20874891 tgcggcagcacgggtggaaagtctagtat 20874919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 13 - 239
Target Start/End: Complemental strand, 34107564 - 34107338
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||    
T  34107564 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 34107465  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccg 212  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  34107464 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgacccg 34107365  T
Q  213 tgcggcagcacgggtgaaaagtctagt 239  Q
    |||||||||||||||| ||||||||||    
T  34107364 tgcggcagcacgggtggaaagtctagt 34107338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 13 - 239
Target Start/End: Complemental strand, 38247091 - 38246865
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||    
T  38247091 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 38246992  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccg 212  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  38246991 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgacccg 38246892  T
Q  213 tgcggcagcacgggtgaaaagtctagt 239  Q
    |||||||||||||||| ||||||||||    
T  38246891 tgcggcagcacgggtggaaagtctagt 38246865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 13 - 239
Target Start/End: Complemental strand, 16526532 - 16526306
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||    
T  16526532 aatataatattgacatataattttaacaaaagaacgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 16526433  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccg 212  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  16526432 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgacccg 16526333  T
Q  213 tgcggcagcacgggtgaaaagtctagt 239  Q
    |||||||||||||||| ||||||||||    
T  16526332 tgcggcagcacgggtggaaagtctagt 16526306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 13 - 239
Target Start/End: Complemental strand, 10729668 - 10729442
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||       ||||||||||||||||||||||||||||    
T  10729668 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttttggtgaataagcgtggtgtctgaggttcg 10729569  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccg 212  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  10729568 aattccaacatctgcatatatttgggaccacatatttcattctcttggatatgcattgagatttgtttttgtctactatatctacaatgtatatgacccg 10729469  T
Q  213 tgcggcagcacgggtgaaaagtctagt 239  Q
    |||||||||||||||| ||||||||||    
T  10729468 tgcggcagcacgggtggaaagtctagt 10729442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 13 - 240
Target Start/End: Complemental strand, 17373390 - 17373160
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||    
T  17373390 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 17373291  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatg---tatatgat 209  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||   |||||||     
T  17373290 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtactatatgac 17373191  T
Q  210 ccgtgcggcagcacgggtgaaaagtctagta 240  Q
    ||||||||||||||||||| |||||||||||    
T  17373190 ccgtgcggcagcacgggtggaaagtctagta 17373160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 13 - 239
Target Start/End: Complemental strand, 2399166 - 2398942
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||       ||||||||||||||||||||||||||||    
T  2399166 aatataatattgacatataattttaacaaaagaatgaagtaacac--gattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 2399069  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccg 212  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  2399068 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgacccg 2398969  T
Q  213 tgcggcagcacgggtgaaaagtctagt 239  Q
    |||||||||||||||| ||||||||||    
T  2398968 tgcggcagcacgggtggaaagtctagt 2398942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 13 - 241
Target Start/End: Complemental strand, 20655275 - 20655047
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    ||||||| |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||       |||||||||| |||||||||||||||||    
T  20655275 aatataacattgacatataattttaacaaaagaatgaagtaagacacaattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcg 20655176  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccg 212  Q
    ||||||||||||||||||||||||||||||||| ||| ||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||    
T  20655175 aattccaacatctgcatatatttgggaccacatgttttattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatgacccg 20655076  T
Q  213 tgcggcagcacgggtgaaaagtctagtat 241  Q
    |||||||||||||||| ||||||||||||    
T  20655075 tgcggcagcacgggtggaaagtctagtat 20655047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 13 - 204
Target Start/End: Complemental strand, 33570533 - 33570342
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||    
T  33570533 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 33570434  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtat 204  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||    
T  33570433 aattccaacatctgcatatatttgggaccacatatttcattctctttggtatgcattgagatttgtttttgtctactatatctacaatgtat 33570342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 13 - 248
Target Start/End: Original strand, 33375765 - 33376002
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||       |||||||||| |||||||||||||||||    
T  33375765 aatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcg 33375864  T
Q  113 aattccaacatctgcatatatttgggac--cacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatc 210  Q
    ||||||||||||||||||||||||||||  ||||| ||| ||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |    
T  33375865 aattccaacatctgcatatatttgggacaccacatgttttattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatgacc 33375964  T
Q  211 cgtgcggcagcacgggtgaaaagtctagtatatttaaa 248  Q
    |||||||||||||||||| ||||| |||||||| ||||    
T  33375965 cgtgcggcagcacgggtggaaagtttagtatatataaa 33376002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 13 - 228
Target Start/End: Original strand, 1395992 - 1396207
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||       |||||||||| |||||||||||||||||    
T  1395992 aatataacattgacatataattttaacaaaagaatgaagtaacacacgactgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcg 1396091  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccg 212  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| |||| |||||||||||| |||    
T  1396092 aattccaacatctgcagatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctgctacatctgcaatgtatatgacccg 1396191  T
Q  213 tgcggcagcacgggtg 228  Q
    ||||||||||||||||    
T  1396192 tgcggcagcacgggtg 1396207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 13 - 239
Target Start/End: Original strand, 5479199 - 5479425
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||| || ||||||||||||||    
T  5479199 aatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtagtgtctgaggttcg 5479298  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccg 212  Q
    ||||||||||||| ||||||||||||| ||||||||||||| |||||||||||||||||||||| ||||||||||||| ||||||||||||||||| |||    
T  5479299 aattccaacatctacatatatttgggatcacatatttcattctctttgatatgcattgagatttatttttgtctactacatctacaatgtatatgacccg 5479398  T
Q  213 tgcggcagcacgggtgaaaagtctagt 239  Q
    |||| || ||| |||||||||||||||    
T  5479399 tgcgacaacacaggtgaaaagtctagt 5479425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 13 - 192
Target Start/End: Complemental strand, 14141333 - 14141154
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||    
T  14141333 aatataatattggcatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 14141234  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactata 192  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  14141233 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactata 14141154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 13 - 228
Target Start/End: Complemental strand, 25099462 - 25099247
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||       || ||||||| |||||| ||||||||||    
T  25099462 aatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggcgaataagtgtggtgcctgaggttcg 25099363  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccg 212  Q
    |||||||||||||||||||||||| |||||||| ||| ||| ||||||||||||||| |||||||||||||||||||| ||||||||||||||||| |||    
T  25099362 aattccaacatctgcatatatttgtgaccacatgttttattctctttgatatgcattcagatttgtttttgtctactacatctacaatgtatatgacccg 25099263  T
Q  213 tgcggcagcacgggtg 228  Q
    ||||||||||||||||    
T  25099262 tgcggcagcacgggtg 25099247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 13 - 228
Target Start/End: Complemental strand, 25158552 - 25158337
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||       || ||||||| |||||| ||||||||||    
T  25158552 aatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggcgaataagtgtggtgcctgaggttcg 25158453  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccg 212  Q
    |||||||||||||||||||||||| |||||||| ||| ||| ||||||||||||||| |||||||||||||||||||| ||||||||||||||||| |||    
T  25158452 aattccaacatctgcatatatttgtgaccacatgttttattctctttgatatgcattcagatttgtttttgtctactacatctacaatgtatatgacccg 25158353  T
Q  213 tgcggcagcacgggtg 228  Q
    ||||||||||||||||    
T  25158352 tgcggcagcacgggtg 25158337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 13 - 200
Target Start/End: Original strand, 27647933 - 27648120
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||| |||||||||||||||||    
T  27647933 aatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcg 27648032  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaat 200  Q
    |||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  27648033 aattccaacatctgtatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaat 27648120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 21 - 221
Target Start/End: Complemental strand, 24223382 - 24223182
Alignment:
Q  21 attgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaa 120  Q
    ||||||||||| |||||||||||||||||||||||||||||||| |||| | |||||       |||||||||| |||||||||||||||||||||||||    
T  24223382 attgacatatacttttaacaaaagaatgaagtaacacacgattggtaaagagtaatatttttaaggtgaataagtgtggtgtctgaggttcgaattccaa 24223283  T
Q  121 catctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccgtgcggcag 220  Q
    ||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| |||||| |||||||||| |||||||||||    
T  24223282 catctgcatatatttgggaccacatatttcattctctttcatatgcattgagatttgtttttgtctactacatctacgatgtatatgacccgtgcggcag 24223183  T
Q  221 c 221  Q
    |    
T  24223182 c 24223182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 89 - 243
Target Start/End: Original strand, 40177120 - 40177274
Alignment:
Q  89 aataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctac 188  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  40177120 aataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattctcttttatatgcattgagatttgtttttgtctac 40177219  T
Q  189 tatatctacaatgtatatgatccgtgcggcagcacgggtgaaaagtctagtatat 243  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  40177220 tatatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagtatat 40177274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 13 - 203
Target Start/End: Original strand, 29275627 - 29275817
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||       |||||||||| |||||||||||||||||    
T  29275627 aatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaagttaatatttttaaggtgaataagtgtggtgtctgaggttcg 29275726  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgta 203  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||| || ||||||||||||    
T  29275727 aattccaacatctgcatatatttgggaccacatgtttcattctctttgatatgcattgaaatttgtttttgtctattacatctacaatgta 29275817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 13 - 197
Target Start/End: Complemental strand, 6940729 - 6940545
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    |||||||  ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||       |||||||||| ||||||| |||||||||    
T  6940729 aatataacgttgacatataattttaacaaaagaatgaagtaacatacgattgataaaaattaatatttttcaggtgaataagtgtggtgtatgaggttcg 6940630  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctac 197  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||    
T  6940629 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctac 6940545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 13 - 184
Target Start/End: Complemental strand, 1394712 - 1394541
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||       |||||| ||| ||||||| |||||||||    
T  1394712 aatataacattgacatataaatttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaacaagtgtggtgtttgaggttcg 1394613  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgt 184  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  1394612 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt 1394541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 13 - 176
Target Start/End: Original strand, 17913744 - 17913907
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| |||||||       |||||||||| ||||| | |||||||||    
T  17913744 aatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaagattaatatttttaaggtgaataagtgtggtatttgaggttcg 17913843  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagattt 176  Q
    ||||||||||||| ||||||||||||||||||| ||| ||| ||||||||||||||||||||||    
T  17913844 aattccaacatctacatatatttgggaccacatgttttattctctttgatatgcattgagattt 17913907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 174 - 240
Target Start/End: Complemental strand, 8179818 - 8179752
Alignment:
Q  174 tttgtttttgtctactatatctacaatgtatatgatccgtgcggcagcacgggtgaaaagtctagta 240  Q
    |||| ||| |||||||| ||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  8179818 tttgctttggtctactacatctacaatatatatgatccgtgcggcagcacgggtggaaagtctagta 8179752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 174 - 228
Target Start/End: Complemental strand, 30096341 - 30096287
Alignment:
Q  174 tttgtttttgtctactatatctacaatgtatatgatccgtgcggcagcacgggtg 228  Q
    |||| |||||||||| |||  ||||||||||||||||||||||||||||||||||    
T  30096341 tttgcttttgtctacaatacttacaatgtatatgatccgtgcggcagcacgggtg 30096287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 225
Target Start/End: Complemental strand, 30088767 - 30088716
Alignment:
Q  174 tttgtttttgtctactatatctacaatgtatatgatccgtgcggcagcacgg 225  Q
    ||||||||||||||| |||  |||||||||||||| ||||||||||||||||    
T  30088767 tttgtttttgtctacaatacttacaatgtatatgacccgtgcggcagcacgg 30088716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 1395907 - 1395950
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  1395907 aatataacattaacatataatttttacaaaagaatgaagtaaca 1395950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 2399253 - 2399210
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  2399253 aatataacattaacatataatttttacaaaagaatgaagtaaca 2399210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 5479115 - 5479158
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  5479115 aatataacattaacatataatttttacaaaagaatgaagtaaca 5479158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 6940811 - 6940768
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  6940811 aatataacattaacatataatttttacaaaagaatgaagtaaca 6940768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 10729755 - 10729712
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  10729755 aatataacattaacatataatttttacaaaagaatgaagtaaca 10729712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 14141420 - 14141377
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  14141420 aatataacattaacatataatttttacaaaagaatgaagtaaca 14141377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 16526620 - 16526577
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  16526620 aatataacattaacatataatttttacaaaagaatgaagtaaca 16526577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 17373477 - 17373434
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  17373477 aatataacattaacatataatttttacaaaagaatgaagtaaca 17373434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 20874604 - 20874647
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  20874604 aatataacattaacatataatttttacaaaagaatgaagtaaca 20874647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 24223477 - 24223434
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  24223477 aatataacattaacatataatttttacaaaagaatgaagtaaca 24223434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 27647845 - 27647888
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  27647845 aatataacattaacatataatttttacaaaagaatgaagtaaca 27647888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 33570621 - 33570578
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  33570621 aatataacattaacatataatttttacaaaagaatgaagtaaca 33570578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 34107651 - 34107608
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  34107651 aatataacattaacatataatttttacaaaagaatgaagtaaca 34107608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 34110566 - 34110609
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  34110566 aatataacattaacatataatttttacaaaagaatgaagtaaca 34110609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 38247178 - 38247135
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  38247178 aatataacattaacatataatttttacaaaagaatgaagtaaca 38247135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 40177033 - 40177076
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  40177033 aatataacattaacatataatttttacaaaagaatgaagtaaca 40177076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 197; Significance: 1e-107; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 13 - 242
Target Start/End: Original strand, 41664513 - 41664742
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||    
T  41664513 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 41664612  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccg 212  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  41664613 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgacccg 41664712  T
Q  213 tgcggcagcacgggtgaaaagtctagtata 242  Q
    |||||||||||||||| |||||||||||||    
T  41664713 tgcggcagcacgggtggaaagtctagtata 41664742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 13 - 243
Target Start/End: Original strand, 41663240 - 41663470
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||    
T  41663240 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 41663339  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccg 212  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||     
T  41663340 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgaccca 41663439  T
Q  213 tgcggcagcacgggtgaaaagtctagtatat 243  Q
    |||||||||||||||| ||||||||||||||    
T  41663440 tgcggcagcacgggtggaaagtctagtatat 41663470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 13 - 239
Target Start/End: Original strand, 6120555 - 6120781
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||    
T  6120555 aatataatattgacatatagttttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 6120654  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccg 212  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  6120655 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgacccg 6120754  T
Q  213 tgcggcagcacgggtgaaaagtctagt 239  Q
    |||||||||||||||| ||||||||||    
T  6120755 tgcggcagcacgggtggaaagtctagt 6120781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 13 - 239
Target Start/End: Original strand, 18351554 - 18351780
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||| |||||||||    
T  18351554 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtttgaggttcg 18351653  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccg 212  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  18351654 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgacccg 18351753  T
Q  213 tgcggcagcacgggtgaaaagtctagt 239  Q
    |||||||||||||||| ||||||||||    
T  18351754 tgcggcagcacgggtggaaagtctagt 18351780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 13 - 240
Target Start/End: Original strand, 44902085 - 44902311
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||        |||||||||||||||||||||||||||    
T  44902085 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaatta-tattttttttgtgaataagcgtggtgtctgaggttcg 44902183  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccg 212  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  44902184 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgacccg 44902283  T
Q  213 tgcggcagcacgggtgaaaagtctagta 240  Q
    |||||||||||||||| |||||||||||    
T  44902284 tgcggcagcacgggtggaaagtctagta 44902311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 21 - 239
Target Start/End: Complemental strand, 19596581 - 19596363
Alignment:
Q  21 attgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaa 120  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||       ||||||||||||||||||||||||||||||||||||    
T  19596581 attgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatttttaaggtgaataagcgtggtgtctgaggttcgaattccaa 19596482  T
Q  121 catctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccgtgcggcag 220  Q
    ||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||    
T  19596481 catctgcatatatttgggaccacatatttcattctctttaatatgcattgagatttgtttttgtctactacatctacaatgtatatgacccgtgcggcag 19596382  T
Q  221 cacgggtgaaaagtctagt 239  Q
    |||||||| ||||||||||    
T  19596381 cacgggtggaaagtctagt 19596363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 13 - 239
Target Start/End: Original strand, 20544828 - 20545054
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||       |||||||||||||||||| | |||||||    
T  20544828 aatataatattgacatataattttaacaaaagaatgaagtaccacacgattgataaaaattaatatttttttggtgaataagcgtggtgttttaggttcg 20544927  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccg 212  Q
    ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||    
T  20544928 aattctaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctaccatatctacaatgtatatgacccg 20545027  T
Q  213 tgcggcagcacgggtgaaaagtctagt 239  Q
    |||||||||||||||| ||||||||||    
T  20545028 tgcggcagcacgggtggaaagtctagt 20545054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 13 - 239
Target Start/End: Original strand, 8700264 - 8700490
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||| ||  ||||||| |||||||||    
T  8700264 aatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaaaaaatgtggtgtatgaggttcg 8700363  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccg 212  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||| ||||||||||||||||| |||    
T  8700364 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgaaatttgtttttgtctactacatctacaatgtatatgacccg 8700463  T
Q  213 tgcggcagcacgggtgaaaagtctagt 239  Q
    |||||||||||||||| ||||||||||    
T  8700464 tgcggcagcacgggtggaaagtctagt 8700490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 13 - 242
Target Start/End: Original strand, 42441963 - 42442196
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||       ||||||||||||||||||||||||||||    
T  42441963 aatataatattgacatataattttaacaaaagaatgaagtaacac--gattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 42442060  T
Q  113 ------aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatat 206  Q
          ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42442061 aattcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatat 42442160  T
Q  207 gatccgtgcggcagcacgggtgaaaagtctagtata 242  Q
    || |||||||||| |||||||| |||||||||||||    
T  42442161 gacccgtgcggcaacacgggtggaaagtctagtata 42442196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 164; E-Value: 9e-88
Query Start/End: Original strand, 13 - 237
Target Start/End: Original strand, 31424012 - 31424236
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||       |||||||||| ||||||| |||||||||    
T  31424012 aatataacattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatttttaaggtgaataagtgtggtgtatgaggttcg 31424111  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccg 212  Q
    ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||  ||    
T  31424112 aattccaacatctacatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatgactcg 31424211  T
Q  213 tgcggcagcacgggtgaaaagtcta 237  Q
    |||||||||||||||| ||||||||    
T  31424212 tgcggcagcacgggtggaaagtcta 31424236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 13 - 237
Target Start/End: Complemental strand, 26231485 - 26231261
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||       | |||||||| |||||||||||||||||    
T  26231485 aatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaagatgaataagtgtggtgtctgaggttcg 26231386  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccg 212  Q
    |||||||||||||| ||||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||||| ||||||||||||||| | | |    
T  26231385 aattccaacatctgaatatatttgagaccacatatttcattctctttgatatgcattgaaatttgtttttgtctactacatctacaatgtatataacctg 26231286  T
Q  213 tgcggcagcacgggtgaaaagtcta 237  Q
    ||||| |||||||||||||||||||    
T  26231285 tgcggtagcacgggtgaaaagtcta 26231261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 13 - 240
Target Start/End: Original strand, 42055202 - 42055429
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    ||||||| |||||||||  || |||||||||||||||||||||||||||||||||||||||||||       |||||||||| |||||||||||||||||    
T  42055202 aatataacattgacata--atcttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcg 42055299  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccg 212  Q
    ||||||||||||||||||||||||||| ||| ||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||    
T  42055300 aattccaacatctgcatatatttgggatcacctatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatgacccg 42055399  T
Q  213 tgcg--gcagcacgggtgaaaagtctagta 240  Q
    ||||  | |||||||||| |||||||||||    
T  42055400 tgcggtgtagcacgggtggaaagtctagta 42055429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 13 - 239
Target Start/End: Complemental strand, 36279680 - 36279455
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||| ||||| |||||| ||||    
T  36279680 aatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtatctgagattcg 36279581  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccg 212  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| |||||||||||||||||| |||||||||||||||||  ||    
T  36279580 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatacattgatatttgtttttgtctactacatctacaatgtatatgactcg 36279481  T
Q  213 tgcggcagcacgggtgaaaagtctagt 239  Q
    |||  | ||||||||| ||||||||||    
T  36279480 tgctac-gcacgggtggaaagtctagt 36279455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 86 - 239
Target Start/End: Complemental strand, 27944949 - 27944796
Alignment:
Q  86 gtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtc 185  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  27944949 gtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtc 27944850  T
Q  186 tactatatctacaatgtatatgatccgtgcggcagcacgggtgaaaagtctagt 239  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  27944849 tactatatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagt 27944796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 13 - 239
Target Start/End: Complemental strand, 34007935 - 34007714
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||       |||| ||||| |||||||||||||||||    
T  34007935 aatataacattgacatataattttaacaaaagaatgaagtaacacacgatttataaaaattaatatttttaaggtggataagtgtggtgtctgaggttcg 34007836  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccg 212  Q
    |||||||||||| ||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| |||| | |||    
T  34007835 aattccaacatcggcatatatttgggactacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatggatattacccg 34007736  T
Q  213 tgcggcagcacgggtgaaaagtctagt 239  Q
    |     |||||||||| ||||||||||    
T  34007735 t-----agcacgggtggaaagtctagt 34007714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 13 - 208
Target Start/End: Complemental strand, 999457 - 999262
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||       |||||||||| |||||||||||||||||    
T  999457 aatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcg 999358  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatga 208  Q
    ||||||||||||| ||||||||||||||||||| ||| ||| |||||||||||||||||||||||||||| ||||||| |||||||| ||||||||    
T  999357 aattccaacatctacatatatttgggaccacatgttttattctctttgatatgcattgagatttgtttttatctactacatctacaaagtatatga 999262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 23 - 198
Target Start/End: Original strand, 16214837 - 16215012
Alignment:
Q  23 tgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaaca 122  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||       |||||||||| |||||||  |||||||||||||| |||    
T  16214837 tgacatataattttaacaaaagaatgaagtaacacacgattaataaaaattaatatttttaaggtgaataagtgtggtgttagaggttcgaattcctaca 16214936  T
Q  123 tctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctaca 198  Q
    | ||||||||||| ||||||||||||||||| |||||||||||||||||||||| ||||||||||||| |||||||    
T  16214937 tttgcatatattttggaccacatatttcattctctttgatatgcattgagatttatttttgtctactacatctaca 16215012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 85 - 214
Target Start/End: Complemental strand, 692356 - 692227
Alignment:
Q  85 ggtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgt 184  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||    
T  692356 ggtgaataagtgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccatatatttcattctctttgatatgcattgagatttgtttttgt 692257  T
Q  185 ctactatatctacaatgtatatgatccgtg 214  Q
    |||||| || |||||||||||||| |||||    
T  692256 ctactacatttacaatgtatatgacccgtg 692227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 174 - 243
Target Start/End: Original strand, 2988885 - 2988954
Alignment:
Q  174 tttgtttttgtctactatatctacaatgtatatgatccgtgcggcagcacgggtgaaaagtctagtatat 243  Q
    |||||||||||||| | | | | || ||||||||| || |||||||||||||||||||||||||||||||    
T  2988885 tttgtttttgtctattgtttttgcattgtatatgacccatgcggcagcacgggtgaaaagtctagtatat 2988954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 19596677 - 19596634
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| ||||||||||||||||||||||||||||||||    
T  19596677 aatataacattaacatataattttaacaaaagaatgaagtaaca 19596634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 180 - 243
Target Start/End: Complemental strand, 25889097 - 25889035
Alignment:
Q  180 tttgtctactatatctacaatgtatatgatccgtgcggcagcacgggtgaaaagtctagtatat 243  Q
    |||||||||||| | |||| ||||||||| ||||||||||||||| ||| ||||||||||||||    
T  25889097 tttgtctactattt-tacattgtatatgacccgtgcggcagcacgagtggaaagtctagtatat 25889035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 179 - 228
Target Start/End: Original strand, 31572450 - 31572499
Alignment:
Q  179 ttttgtctactatatctacaatgtatatgatccgtgcggcagcacgggtg 228  Q
    |||||||||||| |  |||||||||||||| |||||||||||||||||||    
T  31572450 ttttgtctactacacttacaatgtatatgacccgtgcggcagcacgggtg 31572499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 6120467 - 6120510
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  6120467 aatataacattaacatataatttttacaaaagaatgaagtaaca 6120510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 16214741 - 16214784
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  16214741 aatataacattaacatataatttttacaaaagaatgaagtaaca 16214784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 18351467 - 18351510
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  18351467 aatataacattaacatataatttttacaaaagaatgaagtaaca 18351510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 26231570 - 26231527
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  26231570 aatataacattaacatataatttttacaaaagaatgaagtaaca 26231527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 31423924 - 31423967
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  31423924 aatataacattaacatataatttttacaaaagaatgaagtaaca 31423967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 34008023 - 34007980
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  34008023 aatataacattaacatataatttttacaaaagaatgaagtaaca 34007980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 41663152 - 41663195
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  41663152 aatataacattaacatataatttttacaaaagaatgaagtaaca 41663195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 42441876 - 42441919
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  42441876 aatataacattaacatataatttttacaaaagaatgaagtaaca 42441919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 239
Target Start/End: Complemental strand, 22139611 - 22139561
Alignment:
Q  189 tatatctacaatgtatatgatccgtgcggcagcacgggtgaaaagtctagt 239  Q
    ||||| |||| ||||||||| |||||| ||| |||||||||||||||||||    
T  22139611 tatatttacattgtatatgacccgtgctgcaacacgggtgaaaagtctagt 22139561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 196; Significance: 1e-107; HSPs: 54)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 13 - 241
Target Start/End: Original strand, 15961135 - 15961363
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||    
T  15961135 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 15961234  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccg 212  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  15961235 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgacccg 15961334  T
Q  213 tgcggcagcacgggtgaaaagtctagtat 241  Q
    |||||||||||||||| ||||||||||||    
T  15961335 tgcggcagcacgggtggaaagtctagtat 15961363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 13 - 239
Target Start/End: Complemental strand, 30474110 - 30473884
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||    
T  30474110 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 30474011  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccg 212  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  30474010 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgacccg 30473911  T
Q  213 tgcggcagcacgggtgaaaagtctagt 239  Q
    |||||||||||||||| ||||||||||    
T  30473910 tgcggcagcacgggtggaaagtctagt 30473884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 13 - 240
Target Start/End: Complemental strand, 6299246 - 6299019
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||    
T  6299246 aatataatattgacatataattttaacaaaggaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 6299147  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccg 212  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  6299146 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgacccg 6299047  T
Q  213 tgcggcagcacgggtgaaaagtctagta 240  Q
    |||||||||||||||| |||||||||||    
T  6299046 tgcggcagcacgggtggaaagtctagta 6299019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 13 - 244
Target Start/End: Original strand, 10477940 - 10478171
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||    
T  10477940 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 10478039  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccg 212  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  10478040 aattccaacatctgcatatatttgtgaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgacccg 10478139  T
Q  213 tgcggcagcacgggtgaaaagtctagtatatt 244  Q
    |||||||||||||||| |||||||||| ||||    
T  10478140 tgcggcagcacgggtggaaagtctagtttatt 10478171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 13 - 239
Target Start/End: Original strand, 18997703 - 18997929
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||    
T  18997703 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 18997802  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccg 212  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  18997803 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgacccg 18997902  T
Q  213 tgcggcagcacgggtgaaaagtctagt 239  Q
    |||||||||||||||| | ||||||||    
T  18997903 tgcggcagcacgggtggatagtctagt 18997929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 13 - 239
Target Start/End: Complemental strand, 32111087 - 32110861
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||    
T  32111087 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 32110988  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccg 212  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  32110987 aattccaacatctgcatatatttggaaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgacccg 32110888  T
Q  213 tgcggcagcacgggtgaaaagtctagt 239  Q
    |||||||||||||||| ||||||||||    
T  32110887 tgcggcagcacgggtggaaagtctagt 32110861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 13 - 239
Target Start/End: Complemental strand, 44832412 - 44832186
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||    
T  44832412 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 44832313  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccg 212  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  44832312 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgacccg 44832213  T
Q  213 tgcggcagcacgggtgaaaagtctagt 239  Q
    ||||||| |||||||| ||||||||||    
T  44832212 tgcggcaacacgggtggaaagtctagt 44832186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 13 - 239
Target Start/End: Complemental strand, 996041 - 995815
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||       ||||||||||||||||||||||||||||    
T  996041 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaagttaatatttttttggtgaataagcgtggtgtctgaggttcg 995942  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccg 212  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  995941 aattccaacatatgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgacccg 995842  T
Q  213 tgcggcagcacgggtgaaaagtctagt 239  Q
    |||||||||||||||| ||||||||||    
T  995841 tgcggcagcacgggtggaaagtctagt 995815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 13 - 239
Target Start/End: Original strand, 18175384 - 18175610
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||       |||||||||| |||||||||||||||||    
T  18175384 aatataatattgacatataattttaacaaaagaatgaagtaacacacgtttgataataattaatatttttttggtgaataagtgtggtgtctgaggttcg 18175483  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccg 212  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  18175484 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgacccg 18175583  T
Q  213 tgcggcagcacgggtgaaaagtctagt 239  Q
    |||||||||||||||| ||||||||||    
T  18175584 tgcggcagcacgggtggaaagtctagt 18175610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 13 - 239
Target Start/End: Original strand, 11725193 - 11725419
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||| |||||||||||||||||    
T  11725193 aatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcg 11725292  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccg 212  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||    
T  11725293 aattccaacatctgcatatatttgagaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatgacccg 11725392  T
Q  213 tgcggcagcacgggtgaaaagtctagt 239  Q
    ||| |||||||||||| ||||||||||    
T  11725393 tgcagcagcacgggtggaaagtctagt 11725419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 14 - 239
Target Start/End: Original strand, 28582859 - 28583084
Alignment:
Q  14 atataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcga 113  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||| ||||||||||||||||||    
T  28582859 atataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcga 28582958  T
Q  114 attccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccgt 213  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||||||| ||||||||||||||||| ||||||| ||||||||||||||||| ||||    
T  28582959 attccaacatctgcatatatttgagaccacatatttcattctctttgatatacattgagatttgtttttatctactacatctacaatgtatatgacccgt 28583058  T
Q  214 gcggcagcacgggtgaaaagtctagt 239  Q
    ||||||||||||||| ||| ||||||    
T  28583059 gcggcagcacgggtggaaaatctagt 28583084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 13 - 240
Target Start/End: Original strand, 18841907 - 18842134
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    ||||||| |||||||||||||||||||||||||||||||||||| || |||||||||||||||||       |||||||||| |||||||||||| ||||    
T  18841907 aatataacattgacatataattttaacaaaagaatgaagtaacatacaattgataaaaattaatatttttaaggtgaataagtgtggtgtctgagattcg 18842006  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccg 212  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| ||||||||||||| ||||||||||||||||| |||    
T  18842007 aattccaacatctgcatatattttggaccacatatttcattctctttgatatgcattgagatttatttttgtctactacatctacaatgtatatgacccg 18842106  T
Q  213 tgcggcagcacgggtgaaaagtctagta 240  Q
    |||||||| ||||||| |||||||||||    
T  18842107 tgcggcagaacgggtggaaagtctagta 18842134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 21 - 240
Target Start/End: Complemental strand, 35122540 - 35122321
Alignment:
Q  21 attgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaa 120  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||       |||||||||| |||||||||||| ||||||||||||    
T  35122540 attgacatataattttaataaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgagattcgaattccaa 35122441  T
Q  121 catctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccgtgcggcag 220  Q
    ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| |||    
T  35122440 catctgcatatattttggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatgacccgtgcgacag 35122341  T
Q  221 cacgggtgaaaagtctagta 240  Q
    || ||||| |||||||||||    
T  35122340 caggggtggaaagtctagta 35122321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 13 - 216
Target Start/End: Original strand, 40026803 - 40027006
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||| ||||||||||||||||     
T  40026803 aatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttca 40026902  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccg 212  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||    
T  40026903 aattccaacatctgcatatatttgggaccacatatttcattatctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatgacccg 40027002  T
Q  213 tgcg 216  Q
    ||||    
T  40027003 tgcg 40027006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 13 - 239
Target Start/End: Original strand, 24408879 - 24409105
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||| ||||||| ||| |||||    
T  24408879 aatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtatgatgttcg 24408978  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccg 212  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||||| ||||||||||||||||| |||    
T  24408979 aattccaacatctgcatatatttgggaccacatatttcattatctttgatatgcattaagatttgtttttatctactacatctacaatgtatatgacccg 24409078  T
Q  213 tgcggcagcacgggtgaaaagtctagt 239  Q
    ||||||| |||||||  ||||||||||    
T  24409079 tgcggcaacacgggtagaaagtctagt 24409105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 13 - 215
Target Start/End: Original strand, 39257446 - 39257648
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||| ||||||||||||||||     
T  39257446 aatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttca 39257545  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccg 212  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||    
T  39257546 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatgacccg 39257645  T
Q  213 tgc 215  Q
    |||    
T  39257646 tgc 39257648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 13 - 234
Target Start/End: Original strand, 11142464 - 11142691
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaat------taatannnnnnnggtgaataagcgtggtgtctga 106  Q
    ||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||      |||||       |||||||||| |||||||||||    
T  11142464 aatataacactgacatataattttaacaaaagaatgaagtaacacacgattgataaaaataaaaattaatatttttaaggtgaataagtgtggtgtctga 11142563  T
Q  107 ggttcgaattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatat 206  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  11142564 ggttcgaattccaacatctgcatatatttgggagcacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatat 11142663  T
Q  207 gatccgtgcggcagcacgggtgaaaagt 234  Q
    |||||||||||||||||||||| |||||    
T  11142664 gatccgtgcggcagcacgggtggaaagt 11142691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 13 - 237
Target Start/End: Original strand, 18568868 - 18569092
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||       | |||||||| ||||||| |||||||||    
T  18568868 aatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaagatgaataagtgtggtgtttgaggttcg 18568967  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccg 212  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||||||| | ||||||||||||||||| |||    
T  18568968 aattccaacatctgcatatatttgggaccacatattttattctctttgatatgcattgagatatgtttttgtctacaacatctacaatgtatatgacccg 18569067  T
Q  213 tgcggcagcacgggtgaaaagtcta 237  Q
    ||||| |||||||||| ||||||||    
T  18569068 tgcggtagcacgggtggaaagtcta 18569092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 13 - 237
Target Start/End: Complemental strand, 28274440 - 28274217
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||| ||||||| |||||||||    
T  28274440 aatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtatgaggttcg 28274341  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccg 212  Q
    ||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||    
T  28274340 aattccaacatctgcgtatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctgctacatctacaatgtatatgatccg 28274241  T
Q  213 tgcggcagcacgggtgaaaagtcta 237  Q
    ||| || |||||| || ||||||||    
T  28274240 tgc-gccgcacggatggaaagtcta 28274217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 21 - 240
Target Start/End: Original strand, 44836920 - 44837139
Alignment:
Q  21 attgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaa 120  Q
    ||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||       ||||||||||||||||||||||||||||||||||||    
T  44836920 attgagatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatttttaaggtgaataagcgtggtgtctgaggttcgaattccaa 44837019  T
Q  121 catctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccgtgcggcag 220  Q
    ||||||||||||||| ||||||||||||| ||| ||||||||||| |||||||||| ||||||||||||| ||||||||||||||| | |||||||||||    
T  44837020 catctgcatatatttaggaccacatattttattctctttgatatgtattgagatttatttttgtctactacatctacaatgtatataacccgtgcggcag 44837119  T
Q  221 cacgggtgaaaagtctagta 240  Q
    |||||||| |||| ||||||    
T  44837120 cacgggtggaaaggctagta 44837139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 45 - 239
Target Start/End: Original strand, 39997726 - 39997920
Alignment:
Q  45 aatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccaca 144  Q
    |||||||||||||||||||||||||||||||||       |||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||    
T  39997726 aatgaagtaacacacgattgataaaaattaatattttaaaggtgaataagtgtggtgtctgaggttcgaattccaacatctgcatatatttggaaccaca 39997825  T
Q  145 tatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccgtgcggcagcacgggtgaaaagtctagt 239  Q
    ||||||||| |||||||||| ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| ||| ||||||    
T  39997826 tatttcattctctttgatatacattgagatttgtttttgtctactacatctacaatgtatatgacccgtgcggcagcacgggtggaaattctagt 39997920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 13 - 207
Target Start/End: Complemental strand, 18210850 - 18210656
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    ||||||| |||||||||||| ||||||||||||| ||| ||||||||||||||||||||||||||       |||||||||| ||||||||||||||||     
T  18210850 aatataacattgacatataactttaacaaaagaaggaaataacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttca 18210751  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 207  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  18210750 aattccaacatctgcatatatttgagaccacatatttcattctctttgatatgcattgagatttatttttgtctactatatctacaatgtatatg 18210656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 13 - 190
Target Start/End: Original strand, 19240666 - 19240843
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||        ||||||||| |||||||||||||||||    
T  19240666 aatataacattgacatataattttaacaaaagaatgaagtaacacaccattgataaaaattaatatttttaacgtgaataagtgtggtgtctgaggttcg 19240765  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctacta 190  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  19240766 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctacta 19240843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 13 - 190
Target Start/End: Original strand, 19313850 - 19314027
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||        ||||||||| |||||||||||||||||    
T  19313850 aatataacattgacatataattttaacaaaagaatgaagtaacacaccattgataaaaattaatatttttaacgtgaataagtgtggtgtctgaggttcg 19313949  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctacta 190  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  19313950 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctacta 19314027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 13 - 200
Target Start/End: Original strand, 19412834 - 19413022
Alignment:
Q  13 aatataatattgacatataattttaacaaaa-gaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttc 111  Q
    ||||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||       |||||||||  ||||||||||||||||    
T  19412834 aatataacattgacatataattttaacaaaaagaatgaagtaacacacgatggataaaaattaatatttttaaggtgaataactgtggtgtctgaggttc 19412933  T
Q  112 gaattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaat 200  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  19412934 gaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaat 19413022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 13 - 187
Target Start/End: Complemental strand, 24004953 - 24004779
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    ||||||| |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||       |||||||||| |||||||||||||||||    
T  24004953 aatataacattgacatataattttaacaaaagaatgaagtaagacatgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcg 24004854  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtcta 187  Q
    |||| |||||||||||||||||||||||||||| ||| ||| ||||||||||||||||||||||| |||||||||    
T  24004853 aatttcaacatctgcatatatttgggaccacatgttttattctctttgatatgcattgagatttgattttgtcta 24004779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 13 - 128
Target Start/End: Complemental strand, 23353803 - 23353688
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||       |||||||||| | |||||||||||||||    
T  23353803 aatataacattgacatataattttaacaaaagaatgaagtaacacaccattgataaaaattaatatttttaaggtgaataagtggggtgtctgaggttcg 23353704  T
Q  113 aattccaacatctgca 128  Q
    ||||||||||||||||    
T  23353703 aattccaacatctgca 23353688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 13 - 207
Target Start/End: Complemental strand, 25875525 - 25875322
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggt------------ 100  Q
    ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||       |||||||||| ||  |                
T  25875525 aatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgttttattctctttaat 25875426  T
Q  101 --gtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctaca 198  Q
      ||||||||||||||||||| ||||||||||     |||| ||||| ||| ||| ||||| |||||||||||||||||||||||||||||||||||||     
T  25875425 atgtctgaggttcgaattccagcatctgcata-----gggagcacatgttttattctctttaatatgcattgagatttgtttttgtctactatatctacg 25875331  T
Q  199 atgtatatg 207  Q
    |||||||||    
T  25875330 atgtatatg 25875322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 181 - 243
Target Start/End: Complemental strand, 23353680 - 23353618
Alignment:
Q  181 ttgtctactatatctacaatgtatatgatccgtgcggcagcacgggtgaaaagtctagtatat 243  Q
    |||||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  23353680 ttgtctactacatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagtatat 23353618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 13 - 70
Target Start/End: Complemental strand, 18481986 - 18481929
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaa 70  Q
    ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  18481986 aatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaa 18481929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 174 - 228
Target Start/End: Complemental strand, 405419 - 405365
Alignment:
Q  174 tttgtttttgtctactatatctacaatgtatatgatccgtgcggcagcacgggtg 228  Q
    |||| ||||||||||||||  |||||||||||||| |||||||||||||||||||    
T  405419 tttgcttttgtctactatacttacaatgtatatgacccgtgcggcagcacgggtg 405365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 192 - 239
Target Start/End: Original strand, 19241008 - 19241055
Alignment:
Q  192 atctacaatgtatatgatccgtgcggcagcacgggtgaaaagtctagt 239  Q
    ||||||||||||||||| |||||||||||| |||||| ||||||||||    
T  19241008 atctacaatgtatatgacccgtgcggcagcgcgggtggaaagtctagt 19241055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 192 - 239
Target Start/End: Original strand, 19314192 - 19314239
Alignment:
Q  192 atctacaatgtatatgatccgtgcggcagcacgggtgaaaagtctagt 239  Q
    ||||||||||||||||| |||||||||||| |||||| ||||||||||    
T  19314192 atctacaatgtatatgacccgtgcggcagcgcgggtggaaagtctagt 19314239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 39997665 - 39997708
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| |||||||||||||||| |||||||||||||||||||    
T  39997665 aatataacattgacatataatttttacaaaagaatgaagtaaca 39997708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 6299333 - 6299290
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  6299333 aatataacattaacatataatttttacaaaagaatgaagtaaca 6299290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 10477853 - 10477896
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  10477853 aatataacattaacatataatttttacaaaagaatgaagtaaca 10477896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 11142381 - 11142424
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  11142381 aatataacattaacatataatttttacaaaagaatgaagtaaca 11142424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 11725106 - 11725149
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  11725106 aatataacattaacatataatttttacaaaagaatgaagtaaca 11725149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 18175297 - 18175340
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  18175297 aatataacattaacatataatttttacaaaagaatgaagtaaca 18175340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 18997616 - 18997659
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  18997616 aatataacattaacatataatttttacaaaagaatgaagtaaca 18997659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 19240580 - 19240623
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  19240580 aatataacattaacatataatttttacaaaagaatgaagtaaca 19240623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 19313764 - 19313807
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  19313764 aatataacattaacatataatttttacaaaagaatgaagtaaca 19313807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 19412752 - 19412795
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  19412752 aatataacattaacatataatttttacaaaagaatgaagtaaca 19412795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 23353889 - 23353846
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  23353889 aatataacattaacatataatttttacaaaagaatgaagtaaca 23353846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 24408795 - 24408838
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  24408795 aatataacattaacatataatttttacaaaagaatgaagtaaca 24408838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 30474196 - 30474153
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  30474196 aatataacattaacatataatttttacaaaagaatgaagtaaca 30474153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 32111174 - 32111131
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  32111174 aatataacattaacatataatttttacaaaagaatgaagtaaca 32111131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 35122628 - 35122585
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  35122628 aatataacattaacatataatttttacaaaagaatgaagtaaca 35122585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 39997580 - 39997623
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  39997580 aatataacattaacatataatttttacaaaagaatgaagtaaca 39997623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 44832500 - 44832457
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  44832500 aatataacattaacatataatttttacaaaagaatgaagtaaca 44832457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 44836824 - 44836867
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  44836824 aatataacattaacatataatttttacaaaagaatgaagtaaca 44836867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 56
Target Start/End: Complemental strand, 18210935 - 18210893
Alignment:
Q  14 atataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    |||||| ||| |||||||||||| |||||||||||||||||||    
T  18210935 atataacattaacatataatttttacaaaagaatgaagtaaca 18210893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 240
Target Start/End: Original strand, 34815244 - 34815286
Alignment:
Q  198 aatgtatatgatccgtgcggcagcacgggtgaaaagtctagta 240  Q
    ||||||||||| ||||||| |||||||||||| ||||||||||    
T  34815244 aatgtatatgacccgtgcgtcagcacgggtgataagtctagta 34815286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 243
Target Start/End: Complemental strand, 11071997 - 11071957
Alignment:
Q  203 atatgatccgtgcggcagcacgggtgaaaagtctagtatat 243  Q
    |||||| ||||||||||||||||||| || |||||||||||    
T  11071997 atatgacccgtgcggcagcacgggtgcaaggtctagtatat 11071957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 196; Significance: 1e-107; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 13 - 248
Target Start/End: Original strand, 52434627 - 52434863
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||    
T  52434627 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 52434726  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccg 212  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  52434727 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgacccg 52434826  T
Q  213 tgcggcagcacgggtgaaaagtctag-tatatttaaa 248  Q
    |||||||||||||||| ||||||||| ||||||||||    
T  52434827 tgcggcagcacgggtggaaagtctagttatatttaaa 52434863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 13 - 240
Target Start/End: Complemental strand, 30825148 - 30824921
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||    
T  30825148 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 30825049  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccg 212  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  30825048 aattccaacatctgcatatatttggaaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgacccg 30824949  T
Q  213 tgcggcagcacgggtgaaaagtctagta 240  Q
    |||||||||||||||| |||||||||||    
T  30824948 tgcggcagcacgggtggaaagtctagta 30824921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 13 - 239
Target Start/End: Complemental strand, 16918114 - 16917888
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||    
T  16918114 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 16918015  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccg 212  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  16918014 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgacccg 16917915  T
Q  213 tgcggcagcacgggtgaaaagtctagt 239  Q
    ||||||||||| |||| ||||||||||    
T  16917914 tgcggcagcacaggtggaaagtctagt 16917888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 13 - 239
Target Start/End: Complemental strand, 53143488 - 53143262
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||    
T  53143488 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 53143389  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccg 212  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||    
T  53143388 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatgacccg 53143289  T
Q  213 tgcggcagcacgggtgaaaagtctagt 239  Q
    |||||||||||||||||||| ||||||    
T  53143288 tgcggcagcacgggtgaaaaatctagt 53143262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 13 - 240
Target Start/End: Original strand, 37651669 - 37651896
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||| |||||||||    
T  37651669 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtttgaggttcg 37651768  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccg 212  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  37651769 aattccaacatctgcatatatttgagaccacatatttcattctctttcatatgcattgagatttgtttttgtctactatatctacaatgtatatgacccg 37651868  T
Q  213 tgcggcagcacgggtgaaaagtctagta 240  Q
    |||||||||||||||| |||||||||||    
T  37651869 tgcggcagcacgggtggaaagtctagta 37651896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 13 - 242
Target Start/End: Complemental strand, 12090686 - 12090456
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaa-tgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttc 111  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||       | |||||||||||||||||||||||||    
T  12090686 aatataatattgacatataattttaacaaaagaaatgaagtaacacacgattgataaaaattaatattttttggttgaataagcgtggtgtctgaggttc 12090587  T
Q  112 gaattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatcc 211  Q
    |||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  12090586 gaattccaacatctacatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgaccc 12090487  T
Q  212 gtgcggcagcacgggtgaaaagtctagtata 242  Q
    ||||||||||||||||| |||||||||||||    
T  12090486 gtgcggcagcacgggtggaaagtctagtata 12090456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 14 - 239
Target Start/End: Complemental strand, 16905177 - 16904952
Alignment:
Q  14 atataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcga 113  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||       |||||||||| ||||||||||||||||||    
T  16905177 atataacattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcga 16905078  T
Q  114 attccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccgt 213  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  16905077 attccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatgacccgt 16904978  T
Q  214 gcggcagcacgggtgaaaagtctagt 239  Q
    ||||||||||||||| ||||||||||    
T  16904977 gcggcagcacgggtggaaagtctagt 16904952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 13 - 239
Target Start/End: Complemental strand, 31966195 - 31965969
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||    
T  31966195 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 31966096  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccg 212  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| ||| || || ||||||||||||||||| |||    
T  31966095 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttatttatgtataataaatctacaatgtatatgacccg 31965996  T
Q  213 tgcggcagcacgggtgaaaagtctagt 239  Q
    |||||||||||||||| ||||||||||    
T  31965995 tgcggcagcacgggtggaaagtctagt 31965969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 169; E-Value: 9e-91
Query Start/End: Original strand, 13 - 242
Target Start/End: Complemental strand, 33139697 - 33139468
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||       |||||||||  |||||||||||||||||    
T  33139697 aatataacattgacatataattttaacaaaagaatgaagtaatacacgattgataaaaattaatatttttaaggtgaataaatgtggtgtctgaggttcg 33139598  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccg 212  Q
    |||||||||||||||||||||||||||| |||||||| ||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||    
T  33139597 aattccaacatctgcatatatttgggacaacatatttaattctctttgatatgcattgagatttgtttttgtctactaaatctacaatgtatatgacccg 33139498  T
Q  213 tgcggcagcacgggtgaaaagtctagtata 242  Q
    |||||||||||||||| |||||||||||||    
T  33139497 tgcggcagcacgggtggaaagtctagtata 33139468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 164; E-Value: 9e-88
Query Start/End: Original strand, 13 - 237
Target Start/End: Original strand, 46256037 - 46256261
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    ||||||| |||||||||||||||||||||||||||||||||| | ||||||||||||||||||||       |||||||||| ||||||||||||||||     
T  46256037 aatataacattgacatataattttaacaaaagaatgaagtaagatacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcc 46256136  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccg 212  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||    
T  46256137 aattccaacatctgcatatatttgggaccacatattttattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatgacccg 46256236  T
Q  213 tgcggcagcacgggtgaaaagtcta 237  Q
    |||||||||||||||| ||||||||    
T  46256237 tgcggcagcacgggtggaaagtcta 46256261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 13 - 228
Target Start/End: Complemental strand, 44376305 - 44376090
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||       |||||||||| |||||||||||||||||    
T  44376305 aatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcg 44376206  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccg 212  Q
    |||||||||||||||||||||||| |||||||| ||| ||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||    
T  44376205 aattccaacatctgcatatatttgtgaccacatgttttattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatgacccg 44376106  T
Q  213 tgcggcagcacgggtg 228  Q
    ||||||||||||||||    
T  44376105 tgcggcagcacgggtg 44376090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 13 - 239
Target Start/End: Complemental strand, 37591030 - 37590804
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    ||||||| |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||       |||||||||| |||||||||||||||||    
T  37591030 aatataacattgacatataattttaacaaaagaatgaagtaagacatgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcg 37590931  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccg 212  Q
    |||| |||||||||||||||||||||||||||| ||| ||| ||||||||||||||||||||||| |||||||||||| ||||||||||||||||| |||    
T  37590930 aatttcaacatctgcatatatttgggaccacatgttttattctctttgatatgcattgagatttgattttgtctactacatctacaatgtatatgacccg 37590831  T
Q  213 tgcggcagcacgggtgaaaagtctagt 239  Q
    |||||||||||||||| ||||||||||    
T  37590830 tgcggcagcacgggtggaaagtctagt 37590804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 14 - 239
Target Start/End: Original strand, 35760585 - 35760810
Alignment:
Q  14 atataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcga 113  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||  ||||||| ||||||||||    
T  35760585 atataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataattgtggtgtttgaggttcga 35760684  T
Q  114 attccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccgt 213  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| ||||| |||||||||||||||||||||||||  |||    
T  35760685 attccaacatctgcatatatttgggaccacatatttcattctctttgatatacattgagatttatttttatctactatatctacaatgtatatgactcgt 35760784  T
Q  214 gcggcagcacgggtgaaaagtctagt 239  Q
    ||||||||||||||| ||| ||||||    
T  35760785 gcggcagcacgggtggaaaatctagt 35760810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 13 - 239
Target Start/End: Original strand, 41387129 - 41387355
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    ||||||| |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||       |||||||||| |||||||||||||||||    
T  41387129 aatataacattgacatataattttaacaaaagaatgaagtaagacacgatcgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcg 41387228  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccg 212  Q
    |||| || ||||||||||||||||||||||||| ||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  41387229 aatttcagcatctgcatatatttgggaccacatgttttattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgacccg 41387328  T
Q  213 tgcggcagcacgggtgaaaagtctagt 239  Q
    | ||||||||||| || ||||||||||    
T  41387329 tacggcagcacggatggaaagtctagt 41387355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 13 - 240
Target Start/End: Complemental strand, 48118757 - 48118533
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||       |||||||| | ||||||| |||||||||    
T  48118757 aatataacattgacatataattttaacaaaagaatgaagtaacacacgattggtaaaaattaatatttttaaggtgaatacgtgtggtgtttgaggttcg 48118658  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccg 212  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||   |||||||||||||||||  ||    
T  48118657 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttatttttgtctac---atctacaatgtatatgactcg 48118561  T
Q  213 tgcggcagcacgggtgaaaagtctagta 240  Q
    |||||||||||||||| |||||||||||    
T  48118560 tgcggcagcacgggtggaaagtctagta 48118533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 21 - 239
Target Start/End: Complemental strand, 47143018 - 47142800
Alignment:
Q  21 attgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaa 120  Q
    ||||| ||||||||||||||||||||||||||||||||| || ||||||||||||||       ||||||||||| ||||||||||||||||||||| ||    
T  47143018 attgagatataattttaacaaaagaatgaagtaacacacaatcgataaaaattaatatttttaaggtgaataagcatggtgtctgaggttcgaattctaa 47142919  T
Q  121 catctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccgtgcggcag 220  Q
    |||||||||||||||| |||||||||| ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| | |||||||||    
T  47142918 catctgcatatatttgagaccacatatgtcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatgaccagtgcggcag 47142819  T
Q  221 cacgggtgaaaagtctagt 239  Q
    |||||||| ||||||||||    
T  47142818 cacgggtggaaagtctagt 47142800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 13 - 237
Target Start/End: Complemental strand, 45977216 - 45976992
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||       |||||||||| |||||||||||||||||    
T  45977216 aatataacattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcg 45977117  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccg 212  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| |||| ||||| ||||||| |||||| |||||||||| |||    
T  45977116 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgatatttatttttatctactacatctacgatgtatatgacccg 45977017  T
Q  213 tgcggcagcacgggtgaaaagtcta 237  Q
    ||| ||||||||| || ||||||||    
T  45977016 tgcagcagcacggatggaaagtcta 45976992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 13 - 239
Target Start/End: Complemental strand, 39058583 - 39058357
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||       |||||||||| ||||| |||||||||||    
T  39058583 aatataacattgacatataattttaacaaaagaatgaagtaacacatgattgataaaaattaatatttttaaggtgaataagtgtggtatctgaggttcg 39058484  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccg 212  Q
    |||||||||||||  |||||||||||||||||||||||||| ||||||||||  ||| | |||||||||||||||||||||||||||||||||||| |||    
T  39058483 aattccaacatcttgatatatttgggaccacatatttcattctctttgatatatattaaaatttgtttttgtctactatatctacaatgtatatgacccg 39058384  T
Q  213 tgcggcagcacgggtgaaaagtctagt 239  Q
    ||||||||||| |||| ||| ||||||    
T  39058383 tgcggcagcacaggtggaaaatctagt 39058357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 13 - 216
Target Start/End: Complemental strand, 31628713 - 31628510
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||       | |||||||| ||||||| |||||||||    
T  31628713 aatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttaagatgaataagtgtggtgtatgaggttcg 31628614  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccg 212  Q
    |||||||||||||||||||||||| |||||||||||| ||| |||||||||||||||||||| ||||||||||||| | ||||||||||||||||| |||    
T  31628613 aattccaacatctgcatatatttgagaccacatatttaattctctttgatatgcattgagatatgtttttgtctacaacatctacaatgtatatgacccg 31628514  T
Q  213 tgcg 216  Q
    ||||    
T  31628513 tgcg 31628510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 13 - 215
Target Start/End: Complemental strand, 52098417 - 52098214
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaatt-aatannnnnnnggtgaataagcgtggtgtctgaggttc 111  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       |||||||||| || |||||||| |||     
T  52098417 aatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaatttaatatttttaaggtgaataagtgttgtgtctgaagttt 52098318  T
Q  112 gaattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatcc 211  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| |||| ||||||||| ||    
T  52098317 gaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttatttttgtctactatatttacagtgtatatgaccc 52098218  T
Q  212 gtgc 215  Q
    ||||    
T  52098217 gtgc 52098214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 13 - 190
Target Start/End: Complemental strand, 45782655 - 45782478
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||| ||||||||||||||||     
T  45782655 aatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttca 45782556  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctacta 190  Q
    ||||||||||||| ||||||||| ||||||||||||||||| ||||||||||  |||||||||| |||||||||||||    
T  45782555 aattccaacatcttcatatatttaggaccacatatttcattctctttgatatatattgagatttatttttgtctacta 45782478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 13 - 216
Target Start/End: Original strand, 54624960 - 54625156
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    ||||||| |||||||||||||||||||||| |||||||||||||      |||||||||||||||       |||||||||| |||||||||||||||||    
T  54624960 aatataacattgacatataattttaacaaa-gaatgaagtaaca------tgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcg 54625052  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccg 212  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||  |||||||||||||| | |||    
T  54625053 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattaagatttgtttttgtctactacgtctacaatgtatataacccg 54625152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 13 - 177
Target Start/End: Complemental strand, 50229933 - 50229768
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaa-ttaatannnnnnnggtgaataagcgtggtgtctgaggttc 111  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||       ||||||||||  |||||||||||||||    
T  50229933 aatataacattgacatataattttaacaaaagaatgaagtaacacactattgataaaaaattaatatttttaaggtgaataagtatggtgtctgaggttc 50229834  T
Q  112 gaattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttg 177  Q
    |||||||||||||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||    
T  50229833 gaattccaacatctgcatatattttggaccacatgtttcattctctttgatatgcattgagatttg 50229768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 145 - 199
Target Start/End: Complemental strand, 50229766 - 50229712
Alignment:
Q  145 tatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaa 199  Q
    ||||||||| |||||||||||||||||||||| ||||||||||||| ||||||||    
T  50229766 tatttcattctctttgatatgcattgagatttttttttgtctactacatctacaa 50229712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 85 - 132
Target Start/End: Complemental strand, 34684650 - 34684603
Alignment:
Q  85 ggtgaataagcgtggtgtctgaggttcgaattccaacatctgcatata 132  Q
    |||||||||| | |||||||||||||||||||||||| ||||||||||    
T  34684650 ggtgaataagtggggtgtctgaggttcgaattccaacctctgcatata 34684603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 198 - 239
Target Start/End: Original strand, 18209699 - 18209740
Alignment:
Q  198 aatgtatatgatccgtgcggcagcacgggtgaaaagtctagt 239  Q
    ||||||||||| ||||||||||||||||||| ||||||||||    
T  18209699 aatgtatatgacccgtgcggcagcacgggtggaaagtctagt 18209740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 12090773 - 12090730
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  12090773 aatataacattaacatataatttttacaaaagaatgaagtaaca 12090730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 16905261 - 16905218
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  16905261 aatataacattaacatataatttttacaaaagaatgaagtaaca 16905218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 16918201 - 16918158
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  16918201 aatataacattaacatataatttttacaaaagaatgaagtaaca 16918158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 200 - 239
Target Start/End: Original strand, 26724134 - 26724173
Alignment:
Q  200 tgtatatgatccgtgcggcagcacgggtgaaaagtctagt 239  Q
    ||||||| | ||||||||||||||||||||||||||||||    
T  26724134 tgtatataacccgtgcggcagcacgggtgaaaagtctagt 26724173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 30825235 - 30825192
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  30825235 aatataacattaacatataatttttacaaaagaatgaagtaaca 30825192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 31966282 - 31966239
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  31966282 aatataacattaacatataatttttacaaaagaatgaagtaaca 31966239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 39058665 - 39058622
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  39058665 aatataacattaacatataatttttacaaaagaatgaagtaaca 39058622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 45977307 - 45977264
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  45977307 aatataacattaacatataatttttacaaaagaatgaagtaaca 45977264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 47143113 - 47143070
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  47143113 aatataacattaacatataatttttacaaaagaatgaagtaaca 47143070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 48118845 - 48118802
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  48118845 aatataacattaacatataatttttacaaaagaatgaagtaaca 48118802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 52098503 - 52098460
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  52098503 aatataacattaacatataatttttacaaaagaatgaagtaaca 52098460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 52434540 - 52434583
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  52434540 aatataacattaacatataatttttacaaaagaatgaagtaaca 52434583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 53143577 - 53143534
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  53143577 aatataacattaacatataatttttacaaaagaatgaagtaaca 53143534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 54624879 - 54624922
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  54624879 aatataacattaacatataatttttacaaaagaatgaagtaaca 54624922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 239
Target Start/End: Complemental strand, 22290020 - 22289955
Alignment:
Q  174 tttgtttttgtctactatatctacaatgtatatgatccgtgcggcagcacgggtgaaaagtctagt 239  Q
    |||||||||| || ||| || | ||||||||||||  |||||||||||||||||| || |||||||    
T  22290020 tttgtttttgccttctacattttcaatgtatatgactcgtgcggcagcacgggtgcaaggtctagt 22289955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 219
Target Start/End: Original strand, 35903633 - 35903678
Alignment:
Q  174 tttgtttttgtctactatatctacaatgtatatgatccgtgcggca 219  Q
    |||| |||||||||||| || ||| |||||||||||||||||||||    
T  35903633 tttgcttttgtctactacatttacgatgtatatgatccgtgcggca 35903678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 228
Target Start/End: Original strand, 19745228 - 19745276
Alignment:
Q  180 tttgtctactatatctacaatgtatatgatccgtgcggcagcacgggtg 228  Q
    ||||||||||| |  |||||||||||||| ||||||||| |||||||||    
T  19745228 tttgtctactacacttacaatgtatatgacccgtgcggccgcacgggtg 19745276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 228
Target Start/End: Complemental strand, 19794578 - 19794530
Alignment:
Q  180 tttgtctactatatctacaatgtatatgatccgtgcggcagcacgggtg 228  Q
    ||||||||||| |  |||||||||||||| ||||||||| |||||||||    
T  19794578 tttgtctactacacttacaatgtatatgacccgtgcggccgcacgggtg 19794530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 53
Target Start/End: Complemental strand, 50230019 - 50229979
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagta 53  Q
    ||||||| ||| |||||||||||| ||||||||||||||||    
T  50230019 aatataacattaacatataatttttacaaaagaatgaagta 50229979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 195; Significance: 1e-106; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 13 - 240
Target Start/End: Complemental strand, 38163565 - 38163338
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||    
T  38163565 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 38163466  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccg 212  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  38163465 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgacccg 38163366  T
Q  213 tgcggcagcacgggtgaaaagtctagta 240  Q
    |||||||||||||||| |||||||||||    
T  38163365 tgcggcagcacgggtggaaagtctagta 38163338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 13 - 239
Target Start/End: Complemental strand, 21804798 - 21804572
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||    
T  21804798 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 21804699  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccg 212  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  21804698 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgacccg 21804599  T
Q  213 tgcggcagcacgggtgaaaagtctagt 239  Q
    |||||||||||||||| ||||||||||    
T  21804598 tgcggcagcacgggtggaaagtctagt 21804572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 13 - 239
Target Start/End: Complemental strand, 42242380 - 42242154
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||    
T  42242380 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 42242281  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccg 212  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  42242280 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgacccg 42242181  T
Q  213 tgcggcagcacgggtgaaaagtctagt 239  Q
    |||||||||||||||| ||||||||||    
T  42242180 tgcggcagcacgggtggaaagtctagt 42242154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 13 - 239
Target Start/End: Complemental strand, 3840867 - 3840641
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||    
T  3840867 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 3840768  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccg 212  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||    
T  3840767 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgactcg 3840668  T
Q  213 tgcggcagcacgggtgaaaagtctagt 239  Q
    |||||||||||||||| ||||||||||    
T  3840667 tgcggcagcacgggtggaaagtctagt 3840641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 13 - 243
Target Start/End: Complemental strand, 27138754 - 27138524
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||    
T  27138754 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 27138655  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccg 212  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||| | |    
T  27138654 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctagaatgtatatgacctg 27138555  T
Q  213 tgcggcagcacgggtgaaaagtctagtatat 243  Q
    |||||||||||||||| ||||||||||||||    
T  27138554 tgcggcagcacgggtggaaagtctagtatat 27138524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 13 - 239
Target Start/End: Complemental strand, 33917173 - 33916947
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||       ||||||||||||||||||||||||||||    
T  33917173 aatataatattgacatataattttaacaaaagaatgaaataacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 33917074  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccg 212  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  33917073 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgacccg 33916974  T
Q  213 tgcggcagcacgggtgaaaagtctagt 239  Q
    |||||||||||||||| ||||||||||    
T  33916973 tgcggcagcacgggtggaaagtctagt 33916947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 13 - 239
Target Start/End: Original strand, 31373459 - 31373685
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||       ||||||||||||||||||||||||||||    
T  31373459 aatataatattgacatataattttaacaaaagaatgaagtaatacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 31373558  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccg 212  Q
    |||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||    
T  31373559 aatttcaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatgacccg 31373658  T
Q  213 tgcggcagcacgggtgaaaagtctagt 239  Q
    |||||||||||||||| ||||||||||    
T  31373659 tgcggcagcacgggtggaaagtctagt 31373685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 13 - 240
Target Start/End: Original strand, 21341826 - 21342053
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||    
T  21341826 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 21341925  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccg 212  Q
    |||||||||||||||||||||||| ||| |||||||||||| |||||||||||||||||||||| |||||||||| |||||||||||||||||||| |||    
T  21341926 aattccaacatctgcatatatttgagactacatatttcattctctttgatatgcattgagatttatttttgtctattatatctacaatgtatatgacccg 21342025  T
Q  213 tgcggcagcacgggtgaaaagtctagta 240  Q
    |||||||||||||||| |||||||||||    
T  21342026 tgcggcagcacgggtggaaagtctagta 21342053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 13 - 241
Target Start/End: Original strand, 21669984 - 21670212
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||| |||||||||||||||||    
T  21669984 aatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcg 21670083  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccg 212  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| | |    
T  21670084 aattccaacatctgcatatatttgggaccacatattttattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatgacctg 21670183  T
Q  213 tgcggcagcacgggtgaaaagtctagtat 241  Q
    |||||||||||||||| ||||||||||||    
T  21670184 tgcggcagcacgggtggaaagtctagtat 21670212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 13 - 243
Target Start/End: Complemental strand, 17178464 - 17178233
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnn-ggtgaataagcgtggtgtctgaggttc 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||        |||||||||| ||||||||||||||||    
T  17178464 aatataatattgacatataattttaacaaaagaatgaagtaacacccgattgataaaaattaatattttttttggtgaataagtgtggtgtctgaggttc 17178365  T
Q  112 gaattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatcc 211  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||    
T  17178364 gaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgaattgagatttgtttttgtctactatatctacaatgtatatgaccc 17178265  T
Q  212 gtgcggcagcacgggtgaaaagtctagtatat 243  Q
     |||||||||||||||| ||||||||||||||    
T  17178264 atgcggcagcacgggtggaaagtctagtatat 17178233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 13 - 239
Target Start/End: Complemental strand, 16376771 - 16376545
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||       |||||||||| |||||||||||||||||    
T  16376771 aatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcg 16376672  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccg 212  Q
    ||||||||||||||||||||||||||||||||| ||| ||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||    
T  16376671 aattccaacatctgcatatatttgggaccacatgttttattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatgacccg 16376572  T
Q  213 tgcggcagcacgggtgaaaagtctagt 239  Q
    |||||||||||||||| ||||||||||    
T  16376571 tgcggcagcacgggtggaaagtctagt 16376545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 13 - 244
Target Start/End: Original strand, 21656631 - 21656862
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||| |||||||||||||||||    
T  21656631 aatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcg 21656730  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccg 212  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||  ||||||| ||||||||| |||    
T  21656731 aattccaacatctgcatatatttgggaccacatattttattctctttgatatgcattgagatttgtttttgtctacttcatctacagtgtatatgacccg 21656830  T
Q  213 tgcggcagcacgggtgaaaagtctagtatatt 244  Q
    || || |||||||||| |||||||||||||||    
T  21656831 tgtggtagcacgggtggaaagtctagtatatt 21656862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 13 - 243
Target Start/End: Original strand, 13786173 - 13786403
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    ||||||| ||||||||||||||||||||||| |||||||||| || |||||||||||||||||||       |||||||||| |||||||||||||||||    
T  13786173 aatataacattgacatataattttaacaaaaaaatgaagtaagacgcgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcg 13786272  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccg 212  Q
    ||||||||||||||||||||||||||||||||| ||| ||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||    
T  13786273 aattccaacatctgcatatatttgggaccacatgttttattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatgacccg 13786372  T
Q  213 tgcggcagcacgggtgaaaagtctagtatat 243  Q
    |||||||||||||||| ||||||||||||||    
T  13786373 tgcggcagcacgggtggaaagtctagtatat 13786403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 13 - 239
Target Start/End: Original strand, 40968894 - 40969120
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||       |||||||||| |||||||||||||||||    
T  40968894 aatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcg 40968993  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccg 212  Q
    ||||||||||||||||||||||||||||||||| ||| ||| |||||||||||||||||||||||||| ||||||||| ||||||||||||||||| |||    
T  40968994 aattccaacatctgcatatatttgggaccacatgttttattctctttgatatgcattgagatttgtttgtgtctactacatctacaatgtatatgacccg 40969093  T
Q  213 tgcggcagcacgggtgaaaagtctagt 239  Q
    |||||||||||||||| ||||||||||    
T  40969094 tgcggcagcacgggtggaaagtctagt 40969120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 13 - 225
Target Start/End: Original strand, 24924082 - 24924294
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||       |||||||||| ||||||||||||||||     
T  24924082 aatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaatttaatatttttaaggtgaataagtgtggtgtctgaggttca 24924181  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccg 212  Q
    ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||    
T  24924182 aattccaacatctacatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatgacccg 24924281  T
Q  213 tgcggcagcacgg 225  Q
    |||||||||||||    
T  24924282 tgcggcagcacgg 24924294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 13 - 237
Target Start/End: Complemental strand, 43933770 - 43933546
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||| |||||||||||||||||    
T  43933770 aatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcg 43933671  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccg 212  Q
    ||||||||||||||||||||||||||||||||||||| ||| ||||| |||||||||||||||| ||||||||||||| ||||||||||||||||| ||     
T  43933670 aattccaacatctgcatatatttgggaccacatattttattctcttttatatgcattgagatttttttttgtctactacatctacaatgtatatgaccct 43933571  T
Q  213 tgcggcagcacgggtgaaaagtcta 237  Q
    ||||| |||||||||| ||||||||    
T  43933570 tgcggtagcacgggtggaaagtcta 43933546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 13 - 239
Target Start/End: Complemental strand, 15109891 - 15109665
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||       | |||||||| |||||||||||||||||    
T  15109891 aatataacattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatacttttaagatgaataagtgtggtgtctgaggttcg 15109792  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccg 212  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||  | |    
T  15109791 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatgtccgg 15109692  T
Q  213 tgcggcagcacgggtgaaaagtctagt 239  Q
    ||||  |||||||||| ||||||||||    
T  15109691 tgcgatagcacgggtggaaagtctagt 15109665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 13 - 239
Target Start/End: Complemental strand, 27903643 - 27903417
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    ||||||| ||||||||| |||||||||||||||||||||||| ||||||||| ||||||||||||       |||||||||| ||||||| |||||||||    
T  27903643 aatataacattgacatagaattttaacaaaagaatgaagtaagacacgattggtaaaaattaatatttttaaggtgaataagtgtggtgtatgaggttcg 27903544  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccg 212  Q
    ||||||||||||||||||||||||||||||||| ||| ||| |||||||||||||||||||||||||||||||||||| ||||||||| ||||||| |||    
T  27903543 aattccaacatctgcatatatttgggaccacatgttttattctctttgatatgcattgagatttgtttttgtctactacatctacaatatatatgacccg 27903444  T
Q  213 tgcggcagcacgggtgaaaagtctagt 239  Q
    |||||||||||||||| ||||||||||    
T  27903443 tgcggcagcacgggtggaaagtctagt 27903417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 13 - 207
Target Start/End: Complemental strand, 21753718 - 21753524
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||       |||||||||| ||||||||| |||||||    
T  21753718 aatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctaaggttcg 21753619  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 207  Q
    ||||  |||||||||||||||||| |||||||| ||| ||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  21753618 aattttaacatctgcatatatttgagaccacatgttttattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatg 21753524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 45 - 215
Target Start/End: Complemental strand, 39030446 - 39030276
Alignment:
Q  45 aatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccaca 144  Q
    |||||||||| ||||||||||||||||||||||       |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  39030446 aatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccaca 39030347  T
Q  145 tatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccgtgc 215  Q
    | ||| ||| ||||||||||||||||| |||||||||||||||||| ||||||||| ||||||| ||||||    
T  39030346 tgttttattctctttgatatgcattgaaatttgtttttgtctactacatctacaatatatatgacccgtgc 39030276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 31096703 - 31096748
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacaca 58  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  31096703 aatataatattgacatataattttaacaaaagaatgaagtaacaca 31096748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 15109973 - 15109930
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||||||| |||||||||||| |||||||||||||||||||    
T  15109973 aatataatattaacatataatttttacaaaagaatgaagtaaca 15109930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 179 - 228
Target Start/End: Original strand, 31097881 - 31097930
Alignment:
Q  179 ttttgtctactatatctacaatgtatatgatccgtgcggcagcacgggtg 228  Q
    |||||||||||| |  |||||||||||||| |||||||||||||||||||    
T  31097881 ttttgtctactacacttacaatgtatatgacccgtgcggcagcacgggtg 31097930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 3840955 - 3840912
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  3840955 aatataacattaacatataatttttacaaaagaatgaagtaaca 3840912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 16376855 - 16376812
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| |||||||||||||||| |||||| ||||||||||||    
T  16376855 aatataacattgacatataatttttacaaaataatgaagtaaca 16376812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 17178551 - 17178508
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  17178551 aatataacattaacatataatttttacaaaagaatgaagtaaca 17178508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 21341737 - 21341780
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  21341737 aatataacattaacatataatttttacaaaagaatgaagtaaca 21341780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 21656547 - 21656590
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  21656547 aatataacattaacatataatttttacaaaagaatgaagtaaca 21656590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 21669895 - 21669938
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  21669895 aatataacattaacatataatttttacaaaagaatgaagtaaca 21669938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 21804885 - 21804842
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  21804885 aatataacattaacatataatttttacaaaagaatgaagtaaca 21804842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 27138841 - 27138798
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  27138841 aatataacattaacatataatttttacaaaagaatgaagtaaca 27138798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 31373370 - 31373413
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  31373370 aatataacattaacatataatttttacaaaagaatgaagtaaca 31373413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 33917260 - 33917217
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  33917260 aatataacattaacatataatttttacaaaagaatgaagtaaca 33917217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 42242467 - 42242424
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  42242467 aatataacattaacatataatttttacaaaagaatgaagtaaca 42242424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 227
Target Start/End: Original strand, 32661033 - 32661086
Alignment:
Q  174 tttgtttttgtctactatatctacaatgtatatgatccgtgcggcagcacgggt 227  Q
    |||| |||||||||||| |  ||||||||||||||  |||||||||||||||||    
T  32661033 tttgcttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggt 32661086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 43933856 - 43933815
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||| ||| |||||||||||| |||||||||||||||||    
T  43933856 aatataacattaacatataatttttacaaaagaatgaagtaa 43933815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 56
Target Start/End: Original strand, 24924001 - 24924041
Alignment:
Q  16 ataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    |||| ||| |||||||||||| |||||||||||||||||||    
T  24924001 ataacattaacatataatttttacaaaagaatgaagtaaca 24924041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 195; Significance: 1e-106; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 13 - 244
Target Start/End: Complemental strand, 43363837 - 43363606
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||    
T  43363837 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 43363738  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccg 212  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  43363737 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgacccg 43363638  T
Q  213 tgcggcagcacgggtgaaaagtctagtatatt 244  Q
    |||||||||||||||| |||||||||| ||||    
T  43363637 tgcggcagcacgggtggaaagtctagtttatt 43363606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 13 - 240
Target Start/End: Original strand, 49672565 - 49672792
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||    
T  49672565 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 49672664  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccg 212  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  49672665 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgacccg 49672764  T
Q  213 tgcggcagcacgggtgaaaagtctagta 240  Q
    |||||||||||||||| |||||||||||    
T  49672765 tgcggcagcacgggtggaaagtctagta 49672792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 13 - 239
Target Start/End: Original strand, 12264203 - 12264429
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||    
T  12264203 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 12264302  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccg 212  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  12264303 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgacccg 12264402  T
Q  213 tgcggcagcacgggtgaaaagtctagt 239  Q
    |||||||||||||||| ||||||||||    
T  12264403 tgcggcagcacgggtggaaagtctagt 12264429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 13 - 239
Target Start/End: Complemental strand, 38654153 - 38653927
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||    
T  38654153 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 38654054  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccg 212  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  38654053 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgacccg 38653954  T
Q  213 tgcggcagcacgggtgaaaagtctagt 239  Q
    |||||||||||||||| ||||||||||    
T  38653953 tgcggcagcacgggtggaaagtctagt 38653927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 13 - 240
Target Start/End: Original strand, 21098307 - 21098534
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||    
T  21098307 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 21098406  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccg 212  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||    
T  21098407 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatgacccg 21098506  T
Q  213 tgcggcagcacgggtgaaaagtctagta 240  Q
    |||||||||||||||| |||||||||||    
T  21098507 tgcggcagcacgggtggaaagtctagta 21098534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 13 - 240
Target Start/End: Original strand, 34121358 - 34121585
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||    
T  34121358 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 34121457  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccg 212  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  34121458 aattccaacatctgcatatatttgggaccacgtatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgacccg 34121557  T
Q  213 tgcggcagcacgggtgaaaagtctagta 240  Q
    |||||||||||||||| |||||||||||    
T  34121558 tgcggcagcacgggtggaaagtctagta 34121585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 13 - 239
Target Start/End: Complemental strand, 1941946 - 1941720
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||| |||||||||||||    
T  1941946 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtgatgtctgaggttcg 1941847  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccg 212  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  1941846 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgacccg 1941747  T
Q  213 tgcggcagcacgggtgaaaagtctagt 239  Q
    |||||||||||||||| ||||||||||    
T  1941746 tgcggcagcacgggtggaaagtctagt 1941720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 13 - 240
Target Start/End: Original strand, 3898425 - 3898652
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||     
T  3898425 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttca 3898524  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccg 212  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  3898525 aattccaacatctgcatatatttgggaccacatatttcattctctttaatatgcattgagatttgtttttgtctactatatctacaatgtatatgacccg 3898624  T
Q  213 tgcggcagcacgggtgaaaagtctagta 240  Q
    |||||||||||||||| |||||||||||    
T  3898625 tgcggcagcacgggtggaaagtctagta 3898652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 13 - 239
Target Start/End: Complemental strand, 49506575 - 49506349
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||||||||    
T  49506575 aatataatattgacatataattttaacaaaagaatgaagtaccacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 49506476  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccg 212  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  49506475 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgacccg 49506376  T
Q  213 tgcggcagcacgggtgaaaagtctagt 239  Q
    |||||||| ||||||| ||||||||||    
T  49506375 tgcggcagtacgggtggaaagtctagt 49506349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 13 - 239
Target Start/End: Original strand, 54073030 - 54073259
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||    
T  54073030 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 54073129  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatg---tatatgat 209  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||   |||||||     
T  54073130 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtactatatgac 54073229  T
Q  210 ccgtgcggcagcacgggtgaaaagtctagt 239  Q
    ||||||||||||||||||| ||||||||||    
T  54073230 ccgtgcggcagcacgggtggaaagtctagt 54073259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 13 - 241
Target Start/End: Original strand, 26948801 - 26949029
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||       |||||||||| |||||||||||||||||    
T  26948801 aatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaagttaatatttttaaggtgaataagtgtggtgtctgaggttcg 26948900  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccg 212  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||    
T  26948901 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatgacccg 26949000  T
Q  213 tgcggcagcacgggtgaaaagtctagtat 241  Q
    |||||||||||||||| ||||||||||||    
T  26949001 tgcggcagcacgggtggaaagtctagtat 26949029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 13 - 239
Target Start/End: Complemental strand, 4584660 - 4584434
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||       |||||||||| ||||||||||||||||     
T  4584660 aatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttca 4584561  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccg 212  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||    
T  4584560 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatgacccg 4584461  T
Q  213 tgcggcagcacgggtgaaaagtctagt 239  Q
    |||||||||||||||| ||||||||||    
T  4584460 tgcggcagcacgggtggaaagtctagt 4584434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 13 - 239
Target Start/End: Original strand, 20671252 - 20671478
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||| |||||||||||||||||    
T  20671252 aatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcg 20671351  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccg 212  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||  ||    
T  20671352 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatgactcg 20671451  T
Q  213 tgcggcagcacgggtgaaaagtctagt 239  Q
    || ||||||||||||| ||||||||||    
T  20671452 tgtggcagcacgggtggaaagtctagt 20671478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 13 - 239
Target Start/End: Complemental strand, 36076680 - 36076454
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||| ||||||||||| |||||    
T  36076680 aatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaagttcg 36076581  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccg 212  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| ||||||||||||||||| |||    
T  36076580 aattccaacatctgcatatatttgggaccacatatttcattctctttaatatgcattgagatttgtttttgtctactacatctacaatgtatatgacccg 36076481  T
Q  213 tgcggcagcacgggtgaaaagtctagt 239  Q
    |||||||||||||||| ||||||||||    
T  36076480 tgcggcagcacgggtggaaagtctagt 36076454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 164; E-Value: 9e-88
Query Start/End: Original strand, 13 - 237
Target Start/End: Original strand, 31488414 - 31488638
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    ||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||       |||||||||| |||||||||||||||||    
T  31488414 aatataacattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcg 31488513  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccg 212  Q
    |||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| | |||    
T  31488514 aattccaacatctgcatatatttgggacaacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatataacccg 31488613  T
Q  213 tgcggcagcacgggtgaaaagtcta 237  Q
    ||||||||||||| || ||||||||    
T  31488614 tgcggcagcacggatggaaagtcta 31488638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 13 - 237
Target Start/End: Original strand, 39146443 - 39146667
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||       |||||||||| |||||||||||||||||    
T  39146443 aatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcg 39146542  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccg 212  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| ||||||||||||| ||||||||||||||||| |||    
T  39146543 aattccaacatctgcatatatttgggaccacatattttattctctttgatatgcattgagatttatttttgtctactacatctacaatgtatatgacccg 39146642  T
Q  213 tgcggcagcacgggtgaaaagtcta 237  Q
    ||||||| ||| | || ||||||||    
T  39146643 tgcggcaacacagatggaaagtcta 39146667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 13 - 239
Target Start/End: Complemental strand, 45558110 - 45557884
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||       |||||||||| |||||||||||||||||    
T  45558110 aatataatattgacatataattttaacaaaagaatgaagtaatacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcg 45558011  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccg 212  Q
    |||| ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| ||||||| | |    
T  45558010 aatttcaacatctgcatatacttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatatatatgacctg 45557911  T
Q  213 tgcggcagcacgggtgaaaagtctagt 239  Q
    | ||| ||||| |||| ||||||||||    
T  45557910 tacggtagcactggtggaaagtctagt 45557884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 13 - 239
Target Start/End: Original strand, 49478211 - 49478437
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    ||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||       |||||||||| |||||||||||||||||    
T  49478211 aatataacattgacatataattttaataaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcg 49478310  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccg 212  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| |||||||  ||||||||||| ||||  ||    
T  49478311 aattccaacatttgcatatatttgggaccacatatttcattatctttgatatgtattgagatttgtttttatctactacgtctacaatgtaaatgactcg 49478410  T
Q  213 tgcggcagcacgggtgaaaagtctagt 239  Q
    |||||||||||||||| ||||||||||    
T  49478411 tgcggcagcacgggtggaaagtctagt 49478437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 55 - 240
Target Start/End: Complemental strand, 40014837 - 40014652
Alignment:
Q  55 cacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattt 154  Q
    |||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  40014837 cacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattc 40014738  T
Q  155 tctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccgtgcggcagcacgggtgaaaagtctagta 240  Q
    |||||||||||||||||||||||||||||| || |||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  40014737 tctttgatatgcattgagatttgtttttgtttattatatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagta 40014652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 13 - 234
Target Start/End: Complemental strand, 55041815 - 55041588
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaat------taatannnnnnnggtgaataagcgtggtgtctga 106  Q
    ||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||      |||||       |||||||||| |||||||||||    
T  55041815 aatataacattgacatataattttaacaaaagagtgaagtaacacacgattgataaaaataaaaattaatatttttaaggtgaataagtgtggtgtctga 55041716  T
Q  107 ggttcgaattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatat 206  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  55041715 ggttcgaattcaaacatctgcatatatttggaaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatat 55041616  T
Q  207 gatccgtgcggcagcacgggtgaaaagt 234  Q
    || |||||||| |||||||||| |||||    
T  55041615 gacccgtgcggtagcacgggtggaaagt 55041588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 13 - 197
Target Start/End: Original strand, 24119210 - 24119394
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||| ||||||||||||||| |    
T  24119210 aatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggtttg 24119309  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctac 197  Q
    |||||||||||||||||||||||||||||| |||||||||| ||||| |||||||||||||||||||||||||||||| ||||||    
T  24119310 aattccaacatctgcatatatttgggaccatatatttcattatctttaatatgcattgagatttgtttttgtctactacatctac 24119394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 85 - 207
Target Start/End: Complemental strand, 26051457 - 26051334
Alignment:
Q  85 ggtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttggg-accacatatttcattttctttgatatgcattgagatttgtttttg 183  Q
    ||||||||||||||||||||||||||||||||||||| || ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||    
T  26051457 ggtgaataagcgtggtgtctgaggttcgaattccaacctcagcatatatttggggaccacatatttcattctctttgatatgcattgagatttgtttttg 26051358  T
Q  184 tctactatatctacaatgtatatg 207  Q
    ||||||| ||||||||||||||||    
T  26051357 tctactacatctacaatgtatatg 26051334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 133 - 239
Target Start/End: Complemental strand, 6460273 - 6460168
Alignment:
Q  133 tttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccgtgcggcagcacgggtgaaaa 232  Q
    ||||||||||||||||| ||| | ||||||||| |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| |||    
T  6460273 tttgggaccacatattttattct-tttgatatgtattgagatttgtttttgtctactacatctacaatgtatatgacccgtgcggcagcacgggtggaaa 6460175  T
Q  233 gtctagt 239  Q
    |||||||    
T  6460174 gtctagt 6460168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 13 - 77
Target Start/End: Complemental strand, 26052304 - 26052240
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaata 77  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26052304 aatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaata 26052240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 174 - 243
Target Start/End: Complemental strand, 5189852 - 5189783
Alignment:
Q  174 tttgtttttgtctactatatctacaatgtatatgatccgtgcggcagcacgggtgaaaagtctagtatat 243  Q
    |||| ||||||||||||| | |||| | ||||||| || ||||| |||||||||| ||||||||||||||    
T  5189852 tttgcttttgtctactatttttacattatatatgacccttgcggtagcacgggtgtaaagtctagtatat 5189783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 179 - 228
Target Start/End: Original strand, 37099713 - 37099762
Alignment:
Q  179 ttttgtctactatatctacaatgtatatgatccgtgcggcagcacgggtg 228  Q
    |||||||||||| |  |||||||||||||| |||||||||||||||||||    
T  37099713 ttttgtctactacacttacaatgtatatgacccgtgcggcagcacgggtg 37099762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 185 - 241
Target Start/End: Complemental strand, 13364076 - 13364020
Alignment:
Q  185 ctactatatctacaatgtatatgatccgtgcggcagcacgggtgaaaagtctagtat 241  Q
    |||||| || |||||||||||||| |||||||||||||  ||||||| |||||||||    
T  13364076 ctactacatatacaatgtatatgacccgtgcggcagcagaggtgaaatgtctagtat 13364020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 1942033 - 1941990
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  1942033 aatataacattaacatataatttttacaaaagaatgaagtaaca 1941990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 3898338 - 3898381
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  3898338 aatataacattaacatataatttttacaaaagaatgaagtaaca 3898381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 12264115 - 12264158
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  12264115 aatataacattaacatataatttttacaaaagaatgaagtaaca 12264158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 20671166 - 20671209
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  20671166 aatataacattaacatataatttttacaaaagaatgaagtaaca 20671209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 21098219 - 21098262
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  21098219 aatataacattaacatataatttttacaaaagaatgaagtaaca 21098262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 26052392 - 26052349
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  26052392 aatataacattaacatataatttttacaaaagaatgaagtaaca 26052349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 26948689 - 26948732
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  26948689 aatataacattaacatataatttttacaaaagaatgaagtaaca 26948732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 31488329 - 31488372
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  31488329 aatataacattaacatataatttttacaaaagaatgaagtaaca 31488372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 34121271 - 34121314
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  34121271 aatataacattaacatataatttttacaaaagaatgaagtaaca 34121314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 38654241 - 38654198
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  38654241 aatataacattaacatataatttttacaaaagaatgaagtaaca 38654198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 43363924 - 43363881
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  43363924 aatataacattaacatataatttttacaaaagaatgaagtaaca 43363881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 49478124 - 49478167
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  49478124 aatataacattaacatataatttttacaaaagaatgaagtaaca 49478167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 49672478 - 49672521
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  49672478 aatataacattaacatataatttttacaaaagaatgaagtaaca 49672521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 55041901 - 55041858
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  55041901 aatataacattaacatataatttttacaaaagaatgaagtaaca 55041858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 192 - 242
Target Start/End: Original strand, 926210 - 926260
Alignment:
Q  192 atctacaatgtatatgatccgtgcggcagcacgggtgaaaagtctagtata 242  Q
    ||||| ||||||||||| ||| ||| |||||||||||||| ||||||||||    
T  926210 atctataatgtatatgacccgggcgtcagcacgggtgaaaggtctagtata 926260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 243
Target Start/End: Complemental strand, 23210394 - 23210336
Alignment:
Q  185 ctactatatctacaatgtatatgatccgtgcggcagcacgggtgaaaagtctagtatat 243  Q
    |||||| ||||||||||||||||| | |||  |||| || |||||||||||||||||||    
T  23210394 ctactacatctacaatgtatatgacctgtgtagcagtacaggtgaaaagtctagtatat 23210336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 244
Target Start/End: Complemental strand, 46921477 - 46921419
Alignment:
Q  186 tactatatctacaatgtatatgatccgtgcggcagcacgggtgaaaagtctagtatatt 244  Q
    |||||||| |||| |||||||||  ||||||  ||||||||||||||||||||| ||||    
T  46921477 tactatatttacattgtatatgactcgtgcgaaagcacgggtgaaaagtctagtttatt 46921419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 36076764 - 36076723
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||| ||| |||||||||||| |||||||||||||||||    
T  36076764 aatataacattaacatataatttttacaaaagaatgaagtaa 36076723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 194; Significance: 1e-105; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 13 - 239
Target Start/End: Original strand, 46277 - 46503
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||    
T  46277 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 46376  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccg 212  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  46377 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgacccg 46476  T
Q  213 tgcggcagcacgggtgaaaagtctagt 239  Q
    |||||||||||||||| ||||||||||    
T  46477 tgcggcagcacgggtggaaagtctagt 46503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 194; Significance: 1e-105; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 13 - 239
Target Start/End: Complemental strand, 12597491 - 12597265
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||    
T  12597491 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 12597392  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccg 212  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  12597391 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgacccg 12597292  T
Q  213 tgcggcagcacgggtgaaaagtctagt 239  Q
    |||||||||||||||| ||||||||||    
T  12597291 tgcggcagcacgggtggaaagtctagt 12597265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 13 - 237
Target Start/End: Original strand, 19997668 - 19997892
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||    
T  19997668 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 19997767  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccg 212  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  19997768 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgacccg 19997867  T
Q  213 tgcggcagcacgggtgaaaagtcta 237  Q
    |||||||||||||||| ||||||||    
T  19997868 tgcggcagcacgggtggaaagtcta 19997892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 13 - 240
Target Start/End: Original strand, 33645945 - 33646172
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||    
T  33645945 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 33646044  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccg 212  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  33646045 aattccaacatctgcatatatttggaaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgacccg 33646144  T
Q  213 tgcggcagcacgggtgaaaagtctagta 240  Q
    |||||||||||||||| |||||||||||    
T  33646145 tgcggcagcacgggtggaaagtctagta 33646172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 13 - 240
Target Start/End: Complemental strand, 28099823 - 28099596
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||    
T  28099823 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 28099724  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccg 212  Q
    |||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||    
T  28099723 aattccaacatcagcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatgacccg 28099624  T
Q  213 tgcggcagcacgggtgaaaagtctagta 240  Q
    |||||||||||||||| |||||||||||    
T  28099623 tgcggcagcacgggtggaaagtctagta 28099596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 13 - 239
Target Start/End: Original strand, 2266771 - 2267005
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtg--------gtgtct 104  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||        ||||||    
T  2266771 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtcgtggtgtct 2266870  T
Q  105 gaggttcgaattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtat 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2266871 gaggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtat 2266970  T
Q  205 atgatccgtgcggcagcacgggtgaaaagtctagt 239  Q
    |||| ||||||||||||||||||| ||||||||||    
T  2266971 atgacccgtgcggcagcacgggtggaaagtctagt 2267005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 14 - 240
Target Start/End: Original strand, 13533771 - 13533997
Alignment:
Q  14 atataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcga 113  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||| ||||||||||||||||||    
T  13533771 atataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcga 13533870  T
Q  114 attccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccgt 213  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| ||||||| ||||||||||||||||| ||||    
T  13533871 attccaacatctgcatatatttgggaccacatatttcattctctttgatatacattgagatttgtttttatctactacatctacaatgtatatgacccgt 13533970  T
Q  214 gcggcagcacgggtgaaaagtctagta 240  Q
    ||||||||||||||| ||| |||||||    
T  13533971 gcggcagcacgggtggaaaatctagta 13533997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 13 - 239
Target Start/End: Original strand, 17202435 - 17202661
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||| |||||||||||||||||    
T  17202435 aatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcg 17202534  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccg 212  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| ||||||||||| |||||||||||||||||   |    
T  17202535 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgtgatttgtatttgtctactacatctacaatgtatatgacttg 17202634  T
Q  213 tgcggcagcacgggtgaaaagtctagt 239  Q
    |||||||||||||||| ||||||||||    
T  17202635 tgcggcagcacgggtggaaagtctagt 17202661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 164; E-Value: 9e-88
Query Start/End: Original strand, 13 - 241
Target Start/End: Original strand, 15044725 - 15044953
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||       |||||||||| |||||||||||||||||    
T  15044725 aatataacattgacatataattttaacaaaagaatgaagtaaaacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcg 15044824  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccg 212  Q
    ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| |||| ||||||||||||| ||||||||||||||||| | |    
T  15044825 aattccaacatctgcatatatttgggaccacatattttattctctttgatatgcattgaaatttatttttgtctactacatctacaatgtatatgacctg 15044924  T
Q  213 tgcggcagcacgggtgaaaagtctagtat 241  Q
    |||||||||||||||| ||||||||||||    
T  15044925 tgcggcagcacgggtggaaagtctagtat 15044953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 13 - 239
Target Start/End: Original strand, 3592896 - 3593122
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||       |||||||||| |||||||||||||||||    
T  3592896 aatataacattgagatataattttaacaaaagaatgaagtaacacacgattcataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcg 3592995  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccg 212  Q
    |||||||||||||| |||||||||||| ||||||||||||| |||| ||||||||||||||||||||||||||||||| ||||||||||||||||| |||    
T  3592996 aattccaacatctgaatatatttgggatcacatatttcattctcttggatatgcattgagatttgtttttgtctactacatctacaatgtatatgacccg 3593095  T
Q  213 tgcggcagcacgggtgaaaagtctagt 239  Q
    |||||||||||||||| ||||||||||    
T  3593096 tgcggcagcacgggtggaaagtctagt 3593122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 13 - 239
Target Start/End: Complemental strand, 10584954 - 10584728
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||| || ||||||||||||||    
T  10584954 aatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtagtgtctgaggttcg 10584855  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccg 212  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| ||||||||||||||||| ||     
T  10584854 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattaagatttgtttttgtctactacatctacaatgtatatgaccca 10584755  T
Q  213 tgcggcagcacgggtgaaaagtctagt 239  Q
    |  ||||||||||||| ||||||||||    
T  10584754 tatggcagcacgggtggaaagtctagt 10584728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 13 - 241
Target Start/End: Original strand, 2005431 - 2005659
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||       |||||||||| |||||||||||||||||    
T  2005431 aatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcg 2005530  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccg 212  Q
    |||||||||||||||||||||||  |||||||| ||| ||| |||||||||||||||||||||||||||||||||||  ||||||||||||||||| |||    
T  2005531 aattccaacatctgcatatatttaagaccacatgttttattctctttgatatgcattgagatttgtttttgtctactgcatctacaatgtatatgacccg 2005630  T
Q  213 tgcggcagcacgggtgaaaagtctagtat 241  Q
    |||||| ||||| ||| ||||||||||||    
T  2005631 tgcggccgcacgagtggaaagtctagtat 2005659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 13 - 172
Target Start/End: Original strand, 17594819 - 17594979
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaatt-aatannnnnnnggtgaataagcgtggtgtctgaggttc 111  Q
    ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||       |||||||||| ||||||||||| |||     
T  17594819 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaatttaatatttttaaggtgaataagtgtggtgtctgaagttt 17594918  T
Q  112 gaattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgag 172  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  17594919 gaatttcaacatctccatatatttgggaccacatatttcattttctttgatatgcattgag 17594979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 13 - 136
Target Start/End: Original strand, 8539603 - 8539726
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||| |||||||||||||||||    
T  8539603 aatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcg 8539702  T
Q  113 aattccaacatctgcatatatttg 136  Q
    ||||||||||||||||||||||||    
T  8539703 aattccaacatctgcatatatttg 8539726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 13 - 137
Target Start/End: Original strand, 25448752 - 25448876
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||       ||||||||||||||||||||||| ||||    
T  25448752 aatataatattgacatataattttaacaaaaaaatgaagtaacacacgattgataaaaattaatatatttttggtgaataagcgtggtgtctgagtttcg 25448851  T
Q  113 aattccaacatctgcatatatttgg 137  Q
    ||||||||||||| |||||||||||    
T  25448852 aattccaacatctacatatatttgg 25448876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 114 - 239
Target Start/End: Complemental strand, 1405688 - 1405563
Alignment:
Q  114 attccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccgt 213  Q
    |||||||||||||||||||||||||| ||||||||||||| ||||| |||| ||||||||||||||||| ||||||| ||||||||||||||||| ||||    
T  1405688 attccaacatctgcatatatttgggatcacatatttcattctctttaatatacattgagatttgtttttatctactacatctacaatgtatatgacccgt 1405589  T
Q  214 gcggcagcacgggtgaaaagtctagt 239  Q
    ||||||||||||||| ||| ||||||    
T  1405588 gcggcagcacgggtggaaaatctagt 1405563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 100 - 203
Target Start/End: Original strand, 33035523 - 33035626
Alignment:
Q  100 tgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaa 199  Q
    |||||||| ||||||||||| |||||||||||||||| |||||||| ||| ||| ||||||| |||||||||||||||||||||||||||| ||||||||    
T  33035523 tgtctgagattcgaattccagcatctgcatatatttgagaccacatgttttattctctttgacatgcattgagatttgtttttgtctactacatctacaa 33035622  T
Q  200 tgta 203  Q
    ||||    
T  33035623 tgta 33035626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 180 - 244
Target Start/End: Original strand, 8539723 - 8539787
Alignment:
Q  180 tttgtctactatatctacaatgtatatgatccgtgcggcagcacgggtgaaaagtctagtatatt 244  Q
    ||||||||||| ||||||||||||||||| ||||||||||||||||||| |||||||||||||||    
T  8539723 tttgtctactacatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagtatatt 8539787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 174 - 239
Target Start/End: Complemental strand, 6300774 - 6300709
Alignment:
Q  174 tttgtttttgtctactatatctacaatgtatatgatccgtgcggcagcacgggtgaaaagtctagt 239  Q
    |||||||||| |||||| || |||||||||||||| ||||||||||||||||||| | ||||||||    
T  6300774 tttgtttttgcctactagatatacaatgtatatgacccgtgcggcagcacgggtgcatagtctagt 6300709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 174 - 239
Target Start/End: Complemental strand, 6307584 - 6307519
Alignment:
Q  174 tttgtttttgtctactatatctacaatgtatatgatccgtgcggcagcacgggtgaaaagtctagt 239  Q
    |||||||||| |||||| || |||||||||||||| ||||||||||||||||||| | ||||||||    
T  6307584 tttgtttttgcctactagatatacaatgtatatgacccgtgcggcagcacgggtgcatagtctagt 6307519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 174 - 228
Target Start/End: Complemental strand, 8657129 - 8657075
Alignment:
Q  174 tttgtttttgtctactatatctacaatgtatatgatccgtgcggcagcacgggtg 228  Q
    |||| |||||||||||| |  |||||||||||||| |||||||||||||||||||    
T  8657129 tttgcttttgtctactacacttacaatgtatatgacccgtgcggcagcacgggtg 8657075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 198 - 239
Target Start/End: Complemental strand, 162710 - 162669
Alignment:
Q  198 aatgtatatgatccgtgcggcagcacgggtgaaaagtctagt 239  Q
    ||||||||||| ||||||||||||||||||| ||||||||||    
T  162710 aatgtatatgacccgtgcggcagcacgggtggaaagtctagt 162669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 189 - 242
Target Start/End: Complemental strand, 2965509 - 2965456
Alignment:
Q  189 tatatctacaatgtatatgatccgtgcggcagcacgggtgaaaagtctagtata 242  Q
    ||||| |||| ||| ||||| |||||||||||||||||||| ||||||||||||    
T  2965509 tatatttacattgtttatgacccgtgcggcagcacgggtgataagtctagtata 2965456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 197 - 242
Target Start/End: Complemental strand, 14986433 - 14986388
Alignment:
Q  197 caatgtatatgatccgtgcggcagcacgggtgaaaagtctagtata 242  Q
    |||||||||||| |||||| |||||||||||| |||||||||||||    
T  14986433 caatgtatatgacccgtgcagcagcacgggtgcaaagtctagtata 14986388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 189 - 237
Target Start/End: Complemental strand, 25342687 - 25342639
Alignment:
Q  189 tatatctacaatgtatatgatccgtgcggcagcacgggtgaaaagtcta 237  Q
    ||||| |||| |||||||||  |||||||||||||||||||||||||||    
T  25342687 tatatttacattgtatatgactcgtgcggcagcacgggtgaaaagtcta 25342639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 2266684 - 2266727
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  2266684 aatataacattaacatataatttttacaaaagaatgaagtaaca 2266727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 10585039 - 10584996
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  10585039 aatataacattaacatataatttttacaaaagaatgaagtaaca 10584996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 12597578 - 12597535
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  12597578 aatataacattaacatataatttttacaaaagaatgaagtaaca 12597535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 15044639 - 15044682
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  15044639 aatataacattaacatataatttttacaaaagaatgaagtaaca 15044682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 17202348 - 17202391
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  17202348 aatataacattaacatataatttttacaaaagaatgaagtaaca 17202391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 17594733 - 17594776
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  17594733 aatataacattaacatataatttttacaaaagaatgaagtaaca 17594776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 19997580 - 19997623
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  19997580 aatataacattaacatataatttttacaaaagaatgaagtaaca 19997623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 28099911 - 28099868
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  28099911 aatataacattaacatataatttttacaaaagaatgaagtaaca 28099868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 33645858 - 33645901
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  33645858 aatataacattaacatataatttttacaaaagaatgaagtaaca 33645901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 239
Target Start/End: Complemental strand, 24165132 - 24165091
Alignment:
Q  198 aatgtatatgatccgtgcggcagcacgggtgaaaagtctagt 239  Q
    ||||||||||| ||||||| |||||||||||| |||||||||    
T  24165132 aatgtatatgacccgtgcgtcagcacgggtgataagtctagt 24165091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 167; Significance: 1e-89; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 13 - 240
Target Start/End: Complemental strand, 149276 - 149049
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||| || |||| ||| |||||    
T  149276 aatataacgttgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgttgtgtttgatgttcg 149177  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccg 212  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||    
T  149176 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatttatatgacccg 149077  T
Q  213 tgcggcagcacgggtgaaaagtctagta 240  Q
    |||||||||||||||| |||||||||||    
T  149076 tgcggcagcacgggtggaaagtctagta 149049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 149361 - 149318
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  149361 aatataacattaacatataatttttacaaaagaatgaagtaaca 149318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0173 (Bit Score: 162; Significance: 1e-86; HSPs: 1)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 13 - 239
Target Start/End: Original strand, 19350 - 19576
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||       |||||||||| |||||||||||||||||    
T  19350 aatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcg 19449  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgatccg 212  Q
    ||||||||||||||||||||||||||||||||||||| ||| ||||| |||||||||||||||||||||||||||||| |||||||||||||| || |||    
T  19450 aattccaacatctgcatatatttgggaccacatatttaattatctttaatatgcattgagatttgtttttgtctactacatctacaatgtataggacccg 19549  T
Q  213 tgcggcagcacgggtgaaaagtctagt 239  Q
    | |||||||||||||| ||||||||||    
T  19550 tacggcagcacgggtggaaagtctagt 19576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0836 (Bit Score: 133; Significance: 3e-69; HSPs: 1)
Name: scaffold0836
Description:

Target: scaffold0836; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 87 - 239
Target Start/End: Complemental strand, 5430 - 5278
Alignment:
Q  87 tgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtct 186  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  5430 tgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtct 5331  T
Q  187 actatatctacaatgtatatgatccgtgcggcagcacgggtgaaaagtctagt 239  Q
    | |||||||||||||||||||  ||||||||||||||||||| ||||||||||    
T  5330 attatatctacaatgtatatgtcccgtgcggcagcacgggtggaaagtctagt 5278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0515 (Bit Score: 113; Significance: 2e-57; HSPs: 1)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 87 - 239
Target Start/End: Complemental strand, 6213 - 6061
Alignment:
Q  87 tgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtct 186  Q
    |||||||| ||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||| |||||||||||    
T  6213 tgaataagtgtggtgtttgaggttcgaattccaacatctgcatatatttgagaccacatatttcattctctttgatatgcattgagatatgtttttgtct 6114  T
Q  187 actatatctacaatgtatatgatccgtgcggcagcacgggtgaaaagtctagt 239  Q
    || | ||||||||||||||||| ||||||||||||||||||| ||| ||||||    
T  6113 acaacatctacaatgtatatgacccgtgcggcagcacgggtggaaaatctagt 6061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 113; Significance: 2e-57; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 87 - 239
Target Start/End: Complemental strand, 6223 - 6071
Alignment:
Q  87 tgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattttctttgatatgcattgagatttgtttttgtct 186  Q
    |||||||| ||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||| |||||||||||    
T  6223 tgaataagtgtggtgtttgaggttcgaattccaacatctgcatatatttgagaccacatatttcattctctttgatatgcattgagatatgtttttgtct 6124  T
Q  187 actatatctacaatgtatatgatccgtgcggcagcacgggtgaaaagtctagt 239  Q
    || | ||||||||||||||||| ||||||||||||||||||| ||| ||||||    
T  6123 acaacatctacaatgtatatgacccgtgcggcagcacgggtggaaaatctagt 6071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0896 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0896
Description:

Target: scaffold0896; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 174 - 228
Target Start/End: Original strand, 1081 - 1135
Alignment:
Q  174 tttgtttttgtctactatatctacaatgtatatgatccgtgcggcagcacgggtg 228  Q
    |||| |||||||||||| |  |||||||||||||| |||||||||||||||||||    
T  1081 tttgcttttgtctactacacttacaatgtatatgacccgtgcggcagcacgggtg 1135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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