View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF20406_low_17 (Length: 218)
Name: NF20406_low_17
Description: NF20406
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20406_low_17 |
 |  |
|
| [»] scaffold0667 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: scaffold0667 (Bit Score: 113; Significance: 2e-57; HSPs: 1)
Name: scaffold0667
Description:
Target: scaffold0667; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 2 - 158
Target Start/End: Original strand, 4820 - 4976
Alignment:
| Q |
2 |
tacggcatgctaggaattaatttccaggagtttgttttcaagctaaagagtctgacatgtgaatgataaaaagggttttttagagagactaaccaagaga |
101 |
Q |
| |
|
|||||||| ||||||||| |||||| ||||| |||||||||||||||||||| ||||||| || |||||||||||||| |||||||||||||||||||| |
|
|
| T |
4820 |
tacggcatagtaggaattattttccacgagttggttttcaagctaaagagtctaacatgtggatcataaaaagggttttgtagagagactaaccaagaga |
4919 |
T |
 |
| Q |
102 |
ttctgaggagtttgtaatcgccggttaaaggatcaaaaccgaagccgtgaacgcata |
158 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4920 |
gtctgaggattttgtaatcgccggttaaaggatcaaaaccgaagccgtgaacgcata |
4976 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 108; Significance: 2e-54; HSPs: 16)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 94 - 201
Target Start/End: Original strand, 9357612 - 9357719
Alignment:
| Q |
94 |
ccaagagattctgaggagtttgtaatcgccggttaaaggatcaaaaccgaagccgtgaacgcatacaccgccgtcaatgttgaaagatcggagaatgtta |
193 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9357612 |
ccaagagattctgaggagtttgtaatcgccggttaaaggatcaaaaccgaagccgtgaacgcatacaccgccgtcaatgttgaaagatcggagaatgtta |
9357711 |
T |
 |
| Q |
194 |
gggatagg |
201 |
Q |
| |
|
|||||||| |
|
|
| T |
9357712 |
gggatagg |
9357719 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 12 - 166
Target Start/End: Complemental strand, 9283973 - 9283819
Alignment:
| Q |
12 |
taggaattaatttccaggagtttgttttcaagctaaagagtctgacatgtgaatgataaaaagggttttttagagagactaaccaagagattctgaggag |
111 |
Q |
| |
|
||||||||| |||||| ||||||||||| |||| ||||||||| |||||||||||||||||| ||||| |||||| |||| ||||||||||| |||||| |
|
|
| T |
9283973 |
taggaattattttccacgagtttgttttggagctgaagagtctggcatgtgaatgataaaaagagttttgtagagatactagccaagagattcggaggag |
9283874 |
T |
 |
| Q |
112 |
tttgtaatcgccggttaaaggatcaaaaccgaagccgtgaacgcatacaccgccg |
166 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
9283873 |
tttgtaatcgccggttaaaggatcaaaaccgaagccgtgaatgcatacaccgccg |
9283819 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 2 - 158
Target Start/End: Original strand, 9321313 - 9321469
Alignment:
| Q |
2 |
tacggcatgctaggaattaatttccaggagtttgttttcaagctaaagagtctgacatgtgaatgataaaaagggttttttagagagactaaccaagaga |
101 |
Q |
| |
|
|||||||| || ||||||| |||||| ||||||||| | |||| ||||||||||||||||||| |||||||| ||| | | ||||| |||||||||||| |
|
|
| T |
9321313 |
tacggcatactgggaattattttccacgagtttgttatagagctgaagagtctgacatgtgaatcataaaaagagttgtgtggagaggctaaccaagaga |
9321412 |
T |
 |
| Q |
102 |
ttctgaggagtttgtaatcgccggttaaaggatcaaaaccgaagccgtgaacgcata |
158 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| || |||||||||| |
|
|
| T |
9321413 |
ttctgaggagtttgtaatcgccggttaaaggatcaaaaccgaaaccatgaacgcata |
9321469 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 2 - 166
Target Start/End: Complemental strand, 9060928 - 9060764
Alignment:
| Q |
2 |
tacggcatgctaggaattaatttccaggagtttgttttcaagctaaagagtctgacatgtgaatgataaaaagggttttttagagagactaaccaagaga |
101 |
Q |
| |
|
|||||||| || |||||| |||||| ||||||||||||||||||||||| ||||||||||||| ||||||| ||||| | ||| | |||||||| || |
|
|
| T |
9060928 |
tacggcatactgggaattgttttccacgagtttgttttcaagctaaagagactgacatgtgaatcataaaaaatgttttgtcgagcaaataaccaagtga |
9060829 |
T |
 |
| Q |
102 |
ttctgaggagtttgtaatcgccggttaaaggatcaaaaccgaagccgtgaacgcatacaccgccg |
166 |
Q |
| |
|
|||||||||||||||||||| |||| || |||||||||||||||||||||||||||| ||||||| |
|
|
| T |
9060828 |
ttctgaggagtttgtaatcggcggtgaatggatcaaaaccgaagccgtgaacgcatataccgccg |
9060764 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 22 - 152
Target Start/End: Complemental strand, 8573272 - 8573142
Alignment:
| Q |
22 |
tttccaggagtttgttttcaagctaaagagtctgacatgtgaatgataaaaagggttttttagagagactaaccaagagattctgaggagtttgtaatcg |
121 |
Q |
| |
|
|||||| |||||||||||||||||||||||| |||||||||||| |||||||||||| | | ||| ||||||||||||||||| |||||||||||||||| |
|
|
| T |
8573272 |
tttccacgagtttgttttcaagctaaagagtgtgacatgtgaatcataaaaagggttatgttgagtgactaaccaagagattcggaggagtttgtaatcg |
8573173 |
T |
 |
| Q |
122 |
ccggttaaaggatcaaaaccgaagccgtgaa |
152 |
Q |
| |
|
||||||| ||||||||||||||||||||| |
|
|
| T |
8573172 |
gcggttaatagatcaaaaccgaagccgtgaa |
8573142 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 12 - 158
Target Start/End: Original strand, 10353468 - 10353614
Alignment:
| Q |
12 |
taggaattaatttccaggagtttgttttcaagctaaagagtctgacatgtgaatgataaaaagggttttttagagagactaaccaagagattctgaggag |
111 |
Q |
| |
|
||||||||| |||||| ||||||||||||||||| |||||||||||||||| || |||||||||||||| |||| || || ||||||||||||||| |
|
|
| T |
10353468 |
taggaattactttccatgagtttgttttcaagctgaagagtctgacatgtggatcataaaaagggttttgtagatcgagcaagttagagattctgaggag |
10353567 |
T |
 |
| Q |
112 |
tttgtaatcgccggttaaaggatcaaaaccgaagccgtgaacgcata |
158 |
Q |
| |
|
|||||||||||||| || || ||||||||||||||| |||||||||| |
|
|
| T |
10353568 |
tttgtaatcgccggatacagaatcaaaaccgaagccatgaacgcata |
10353614 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 13 - 158
Target Start/End: Complemental strand, 7115421 - 7115276
Alignment:
| Q |
13 |
aggaattaatttccaggagtttgttttcaagctaaagagtctgacatgtgaatgataaaaagggttttttagagagactaaccaagagattctgaggagt |
112 |
Q |
| |
|
|||||| | |||||| |||||||||||||| || |||||||||| ||||||| |||||||| |||| | || | |||||||||||||||||| ||| |
|
|
| T |
7115421 |
aggaatcattttccacgagtttgttttcaaactgaagagtctgatctgtgaatcataaaaagagtttggtggattgcataaccaagagattctgagaagt |
7115322 |
T |
 |
| Q |
113 |
ttgtaatcgccggttaaaggatcaaaaccgaagccgtgaacgcata |
158 |
Q |
| |
|
|||||||| | |||||||||||||||||||||||||||| ||||| |
|
|
| T |
7115321 |
ttgtaatcatctgttaaaggatcaaaaccgaagccgtgaaagcata |
7115276 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 94 - 163
Target Start/End: Original strand, 9292357 - 9292426
Alignment:
| Q |
94 |
ccaagagattctgaggagtttgtaatcgccggttaaaggatcaaaaccgaagccgtgaacgcatacaccg |
163 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||| |
|
|
| T |
9292357 |
ccaagagattctgaggagtttgtaatcgccggttaatggatcataaccgaagccgtgaacgcatacaccg |
9292426 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 2 - 166
Target Start/End: Original strand, 9316365 - 9316529
Alignment:
| Q |
2 |
tacggcatgctaggaattaatttccaggagtttgttttcaagctaaagagtctgacatgtgaatgataaaaagggttttttagagagactaaccaagaga |
101 |
Q |
| |
|
|||||||| || |||||| |||||| ||||||||||||||||||||||| ||||||||||||| |||||||| | | | | | | |||||| | |
|
|
| T |
9316365 |
tacggcatactgggaattgttttccacgagtttgttttcaagctaaagagactgacatgtgaatcataaaaagagcaatgaccatcggccatccaagaaa |
9316464 |
T |
 |
| Q |
102 |
ttctgaggagtttgtaatcgccggttaaaggatcaaaaccgaagccgtgaacgcatacaccgccg |
166 |
Q |
| |
|
||||||||||||||||||| || ||| | |||||||||||||||||||||||||||| ||||||| |
|
|
| T |
9316465 |
ttctgaggagtttgtaatcacctgttgatggatcaaaaccgaagccgtgaacgcatataccgccg |
9316529 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 13 - 158
Target Start/End: Original strand, 10348139 - 10348284
Alignment:
| Q |
13 |
aggaattaatttccaggagtttgttttcaagctaaagagtctgacatgtgaatgataaaaagggttttttagagagactaaccaagagattctgaggagt |
112 |
Q |
| |
|
|||||||| ||||| ||||||||||||||||| |||||||| || |||| || |||||||||||| | |||| || ||| ||| |||||||||||| |
|
|
| T |
10348139 |
aggaattatcttccatgagtttgttttcaagctgaagagtctcacttgtggatcataaaaagggttctgtagatcgagtaagtgagaaattctgaggagt |
10348238 |
T |
 |
| Q |
113 |
ttgtaatcgccggttaaaggatcaaaaccgaagccgtgaacgcata |
158 |
Q |
| |
|
|||||||| |||| || ||||||||||||||||||||||||||| |
|
|
| T |
10348239 |
ttgtaatcaccggatatttgatcaaaaccgaagccgtgaacgcata |
10348284 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 22 - 158
Target Start/End: Original strand, 10336198 - 10336337
Alignment:
| Q |
22 |
tttccaggagtttgttttcaagctaaagagtctgacatgtgaatgataaaaag---ggttttttagagagactaaccaagagattctgaggagtttgtaa |
118 |
Q |
| |
|
|||||| |||||||||||| |||| |||||| | | |||||||| || ||||| ||| || |||| ||| ||||||||||||||||||||||||||| |
|
|
| T |
10336198 |
tttccaagagtttgttttcgagctgaagagtgtcaaatgtgaattatcaaaagtatggtgttgtagatcgacgaaccaagagattctgaggagtttgtaa |
10336297 |
T |
 |
| Q |
119 |
tcgccggttaaaggatcaaaaccgaagccgtgaacgcata |
158 |
Q |
| |
|
||| ||| ||| | |||||||||||| ||||||||||||| |
|
|
| T |
10336298 |
tcggcggataatgaatcaaaaccgaatccgtgaacgcata |
10336337 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 94 - 158
Target Start/End: Original strand, 9329028 - 9329092
Alignment:
| Q |
94 |
ccaagagattctgaggagtttgtaatcgccggttaaaggatcaaaaccgaagccgtgaacgcata |
158 |
Q |
| |
|
||||| ||||||||||||||||||||| |||| |||||||||||||||||| ||||||||||||| |
|
|
| T |
9329028 |
ccaagcgattctgaggagtttgtaatcaccggataaaggatcaaaaccgaaaccgtgaacgcata |
9329092 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 96 - 158
Target Start/End: Original strand, 10372301 - 10372363
Alignment:
| Q |
96 |
aagagattctgaggagtttgtaatcgccggttaaaggatcaaaaccgaagccgtgaacgcata |
158 |
Q |
| |
|
||||||||||||||||||||| |||||||| ||||| ||||||||||||||| |||||||||| |
|
|
| T |
10372301 |
aagagattctgaggagtttgtgatcgccggataaagaatcaaaaccgaagccatgaacgcata |
10372363 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 153
Target Start/End: Original strand, 9274852 - 9275000
Alignment:
| Q |
2 |
tacggcatgctaggaattaatttccaggagtttgttttcaagctaaagagtctgacatgtgaatgataaaaagggttttttagagagactaaccaagaga |
101 |
Q |
| |
|
|||||||| || ||||||| |||||| ||||||||||||||||| |||||||| |||||||| | | |||| || | || | ||||||| |||| |
|
|
| T |
9274852 |
tacggcatactgggaattattttccacgagtttgttttcaagctgaagagtctcacatgtgattca---aaagagtaatgtatatcagctaaccatgaga |
9274948 |
T |
 |
| Q |
102 |
ttctgaggagtttgtaatcgccggttaaaggatcaaaaccgaagccgtgaac |
153 |
Q |
| |
|
||||||| ||||| |||||||||| ||||||||||||||| || |||||||| |
|
|
| T |
9274949 |
ttctgagaagtttataatcgccggataaaggatcaaaaccaaaaccgtgaac |
9275000 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 11 - 156
Target Start/End: Complemental strand, 12018660 - 12018515
Alignment:
| Q |
11 |
ctaggaattaatttccaggagtttgttttcaagctaaagagtctgacatgtgaatgataaaaagggttttttagagagactaaccaagagattctgagga |
110 |
Q |
| |
|
||||||| || |||||| ||||| ||||| || || |||||||||||| ||||| | || | |||| | |||| || |||||||||||||||| | |
|
|
| T |
12018660 |
ctaggaagtactttccacgagttcgtttttgaggtatagagtctgacatatgaatcaaaagtacggttgtgtagatcaacaaaccaagagattctgacaa |
12018561 |
T |
 |
| Q |
111 |
gtttgtaatcgccggttaaaggatcaaaaccgaagccgtgaacgca |
156 |
Q |
| |
|
|||| ||||| || |||||||||||||||||||||| |||||| |
|
|
| T |
12018560 |
gtttataatcagaggacaaaggatcaaaaccgaagccgtaaacgca |
12018515 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 152
Target Start/End: Complemental strand, 11987184 - 11987124
Alignment:
| Q |
92 |
aaccaagagattctgaggagtttgtaatcgccggttaaaggatcaaaaccgaagccgtgaa |
152 |
Q |
| |
|
|||||||||||||||| ||||||||||||| | ||||||||||| ||||| ||||||| |
|
|
| T |
11987184 |
aaccaagagattctgatgagtttgtaatcggatgaaaaaggatcaaagccgaatccgtgaa |
11987124 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 87; Significance: 7e-42; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 12 - 158
Target Start/End: Original strand, 26575220 - 26575366
Alignment:
| Q |
12 |
taggaattaatttccaggagtttgttttcaagctaaagagtctgacatgtgaatgataaaaagggttttttagagagactaaccaagagattctgaggag |
111 |
Q |
| |
|
||||||||| |||||| ||||||||||||||||| |||||||| ||||||| || |||||||||||||| |||| || || |||||||||||||||| |
|
|
| T |
26575220 |
taggaattattttccatgagtttgttttcaagctgaagagtctaacatgtggatcataaaaagggttttgtagatcgagcaagtaagagattctgaggag |
26575319 |
T |
 |
| Q |
112 |
tttgtaatcgccggttaaaggatcaaaaccgaagccgtgaacgcata |
158 |
Q |
| |
|
|||||||||||||| ||||| |||||||||||||||||||||||||| |
|
|
| T |
26575320 |
tttgtaatcgccggataaagaatcaaaaccgaagccgtgaacgcata |
26575366 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 84; Significance: 4e-40; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 11 - 158
Target Start/End: Original strand, 37462844 - 37462991
Alignment:
| Q |
11 |
ctaggaattaatttccaggagtttgttttcaagctaaagagtctgacatgtgaatgataaaaagggttttttagagagactaaccaagagattctgagga |
110 |
Q |
| |
|
||||||| || |||||| ||||||||||| |||| |||||||| ||||||| || |||||||||||||| |||| || | ||||||||||||||||| |
|
|
| T |
37462844 |
ctaggaactattttccacgagtttgttttggagctgaagagtctcacatgtggatcataaaaagggttttgtagatcgagaagccaagagattctgagga |
37462943 |
T |
 |
| Q |
111 |
gtttgtaatcgccggttaaaggatcaaaaccgaagccgtgaacgcata |
158 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
37462944 |
gtttgtaatcgccggttaaagaatcaaaaccgaagccgtgaacgcata |
37462991 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 93 - 156
Target Start/End: Complemental strand, 41966425 - 41966362
Alignment:
| Q |
93 |
accaagagattctgaggagtttgtaatcgccggttaaaggatcaaaaccgaagccgtgaacgca |
156 |
Q |
| |
|
|||||||||||||||||||||||| ||||| |||||| |||||||||||||| ||||||||||| |
|
|
| T |
41966425 |
accaagagattctgaggagtttgtgatcgctggttaatggatcaaaaccgaatccgtgaacgca |
41966362 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 153
Target Start/End: Complemental strand, 29453013 - 29452955
Alignment:
| Q |
95 |
caagagattctgaggagtttgtaatcgccggttaaaggatcaaaaccgaagccgtgaac |
153 |
Q |
| |
|
||||||||||||||||||||||||||| || |||| ||||||||||| ||||||||||| |
|
|
| T |
29453013 |
caagagattctgaggagtttgtaatcgacgtttaacggatcaaaaccaaagccgtgaac |
29452955 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 156
Target Start/End: Complemental strand, 29467582 - 29467429
Alignment:
| Q |
2 |
tacggcatgctaggaattaatttccaggagtttgttttcaagctaaagagtctgacatgtgaatgataaaaagggttttttagagagactaaccaagaga |
101 |
Q |
| |
|
|||||||| |||| || || |||||||||||| |||||| |||| |||||| | |||||||||| || | ||| | ||| ||| || ||||||| |
|
|
| T |
29467582 |
tacggcatactagaaagtactttccaggagttcgttttcgagctgaagagtgtaacatgtgaatcatgagtgtggtggtgtagtttgacgaaacaagaga |
29467483 |
T |
 |
| Q |
102 |
ttctgaggagtttgtaatcgccggttaaaggatcaaaaccgaagccgtgaacgca |
156 |
Q |
| |
|
||||||| ||||||||||| ||||||| |||||||||||||||||||||||||| |
|
|
| T |
29467482 |
ttctgag-agtttgtaatcatcggttaatggatcaaaaccgaagccgtgaacgca |
29467429 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 95 - 152
Target Start/End: Complemental strand, 29443027 - 29442970
Alignment:
| Q |
95 |
caagagattctgaggagtttgtaatcgccggttaaaggatcaaaaccgaagccgtgaa |
152 |
Q |
| |
|
||||||||||||| ||||||||||||| ||| || |||||||||||||||||||||| |
|
|
| T |
29443027 |
caagagattctgatgagtttgtaatcgttggtcaatggatcaaaaccgaagccgtgaa |
29442970 |
T |
 |
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Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 156
Target Start/End: Original strand, 29423702 - 29423759
Alignment:
| Q |
99 |
agattctgaggagtttgtaatcgccggttaaaggatcaaaaccgaagccgtgaacgca |
156 |
Q |
| |
|
||||| |||||||||||||||| | ||||| ||||||||||||||||||| |||||| |
|
|
| T |
29423702 |
agattgtgaggagtttgtaatcatcagttaatggatcaaaaccgaagccgtaaacgca |
29423759 |
T |
 |
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