View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20408_high_29 (Length: 332)
Name: NF20408_high_29
Description: NF20408
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20408_high_29 |
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Alignment Details
Target: chr8 (Bit Score: 280; Significance: 1e-157; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 280; E-Value: 1e-157
Query Start/End: Original strand, 1 - 300
Target Start/End: Original strand, 28392090 - 28392389
Alignment:
| Q |
1 |
atgttggaccaatcgctctttcggtatgctccaattttatttattattttctattatgtcaattgaagtacaaataaaacacaaatccaattttaagctt |
100 |
Q |
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| T |
28392090 |
atgttggaccaatcgctctttcggtatgctccaattttatttattattttctactatgtcaattgaagtacaaataaaacacaaatccaattttaagctt |
28392189 |
T |
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| Q |
101 |
atatagtgcattacgagagcgtttataattttgcaactttgtttaataatgagattttagttataaaactgtgaaaagttagttaactagaagcaattac |
200 |
Q |
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| T |
28392190 |
atatagtgcattatgagagcgtttataattttgcaactttgtttaataatgagattttagttataaaactgtgaaaagttagttaactagaagcaattac |
28392289 |
T |
|
| Q |
201 |
gagttataactaactcctagaattagttattaacaaaaagttaattgactaactagccttaaataacttgtgctgcaagtaatatctgtatccttgttaa |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | |||||||||||| |
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| T |
28392290 |
gagttataactaactcctagaattagttattaacaaaaagttaattgactaactagccttaaataacttgtgttgcaagtaatatttttatccttgttaa |
28392389 |
T |
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