View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20408_low_29 (Length: 341)

Name: NF20408_low_29
Description: NF20408
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20408_low_29
NF20408_low_29
[»] chr4 (20 HSPs)
chr4 (178-338)||(54918929-54919091)
chr4 (15-127)||(54919113-54919225)
chr4 (193-315)||(10065070-10065196)
chr4 (190-278)||(20783696-20783784)
chr4 (194-321)||(20291780-20291911)
chr4 (190-317)||(38562128-38562259)
chr4 (4-125)||(54922025-54922147)
chr4 (190-243)||(20291789-20291842)
chr4 (190-243)||(23673436-23673489)
chr4 (193-277)||(6371925-6372009)
chr4 (230-282)||(17236164-17236216)
chr4 (194-284)||(52378713-52378803)
chr4 (190-243)||(7277496-7277549)
chr4 (189-238)||(30920794-30920843)
chr4 (190-243)||(44626477-44626530)
chr4 (193-313)||(23673367-23673490)
chr4 (214-284)||(44626428-44626498)
chr4 (190-243)||(52840275-52840328)
chr4 (289-317)||(2181573-2181601)
chr4 (190-242)||(39993123-39993175)
[»] chr1 (17 HSPs)
chr1 (178-317)||(8900796-8900939)
chr1 (191-317)||(41944772-41944902)
chr1 (190-315)||(35489201-35489330)
chr1 (194-312)||(5368782-5368903)
chr1 (178-277)||(37247618-37247717)
chr1 (194-313)||(5700043-5700168)
chr1 (214-314)||(49166639-49166743)
chr1 (190-241)||(51171338-51171389)
chr1 (190-242)||(882933-882985)
chr1 (190-242)||(4604919-4604971)
chr1 (190-315)||(24419540-24419669)
chr1 (190-277)||(5346969-5347056)
chr1 (184-242)||(21945059-21945117)
chr1 (190-239)||(5700118-5700167)
chr1 (190-243)||(8900801-8900854)
chr1 (212-277)||(11900874-11900939)
chr1 (190-243)||(24419613-24419666)
[»] chr7 (7 HSPs)
chr7 (194-315)||(2399704-2399829)
chr7 (190-315)||(34670357-34670485)
chr7 (192-277)||(23097511-23097595)
chr7 (190-241)||(3094417-3094468)
chr7 (194-242)||(2635678-2635726)
chr7 (225-277)||(15996162-15996214)
chr7 (190-245)||(45444725-45444781)
[»] chr2 (9 HSPs)
chr2 (190-285)||(43445068-43445163)
chr2 (190-315)||(41517368-41517497)
chr2 (190-276)||(27279494-27279580)
chr2 (194-246)||(41221706-41221758)
chr2 (225-284)||(33956328-33956387)
chr2 (190-243)||(29168580-29168633)
chr2 (190-243)||(33956366-33956419)
chr2 (190-242)||(472419-472471)
chr2 (190-315)||(29168507-29168636)
[»] chr6 (9 HSPs)
chr6 (190-283)||(9910535-9910628)
chr6 (190-277)||(26296255-26296342)
chr6 (194-277)||(862833-862916)
chr6 (190-277)||(16260669-16260756)
chr6 (194-258)||(24252896-24252961)
chr6 (192-288)||(31159086-31159182)
chr6 (190-272)||(5069947-5070029)
chr6 (214-243)||(31159157-31159186)
chr6 (190-242)||(3846438-3846490)
[»] scaffold0514 (1 HSPs)
scaffold0514 (190-278)||(5827-5915)
[»] chr8 (12 HSPs)
chr8 (190-312)||(6590790-6590916)
chr8 (194-278)||(14113258-14113342)
chr8 (194-278)||(6649118-6649202)
chr8 (190-278)||(44329164-44329252)
chr8 (194-314)||(30542473-30542596)
chr8 (190-277)||(30358623-30358713)
chr8 (190-277)||(1784096-1784183)
chr8 (207-277)||(24185578-24185648)
chr8 (190-242)||(2602060-2602112)
chr8 (190-243)||(6616590-6616643)
chr8 (190-243)||(27988086-27988139)
chr8 (190-243)||(28045388-28045441)
[»] chr5 (12 HSPs)
chr5 (192-284)||(30046346-30046438)
chr5 (190-288)||(14509856-14509954)
chr5 (190-284)||(28499789-28499883)
chr5 (190-277)||(8355556-8355643)
chr5 (206-315)||(14751148-14751261)
chr5 (190-271)||(11089345-11089426)
chr5 (190-243)||(18200668-18200721)
chr5 (190-278)||(8567921-8568009)
chr5 (197-281)||(19522560-19522644)
chr5 (190-242)||(28499863-28499914)
chr5 (194-246)||(35463964-35464016)
chr5 (190-242)||(43221642-43221694)
[»] chr3 (7 HSPs)
chr3 (190-317)||(16867625-16867756)
chr3 (190-321)||(29212850-29212985)
chr3 (190-317)||(18093785-18093916)
chr3 (204-310)||(10937919-10938028)
chr3 (190-243)||(30122035-30122088)
chr3 (190-242)||(25108987-25109039)
chr3 (191-268)||(27696621-27696698)
[»] scaffold0470 (1 HSPs)
scaffold0470 (190-243)||(5876-5929)


Alignment Details
Target: chr4 (Bit Score: 115; Significance: 2e-58; HSPs: 20)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 178 - 338
Target Start/End: Complemental strand, 54919091 - 54918929
Alignment:
Q  178 tattctctttgttcacatttataagtaaaaaa-tgactttttaagtatattgaataactaatgtatccggccacgtttataggttaaatacattaattat 276  Q
    ||||||||| |||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  54919091 tattctcttcgttcacatttataagtaaaaaaatgactttttaagtacattgaataactaatgtatccggtcacgtttataggttagatacattaattat 54918992  T
Q  277 tgaatatacttagttgtt-ttttgtttataaatgtgaccgaaatgaatatgaaacgattaacc 338  Q
    ||||| |||||||||||| ||||| |||||||||||||||||| || ||||||||||||||||    
T  54918991 tgaatgtacttagttgtttttttgcttataaatgtgaccgaaaggagtatgaaacgattaacc 54918929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 15 - 127
Target Start/End: Complemental strand, 54919225 - 54919113
Alignment:
Q  15 cattaaagatcgaatgcacataaaagtggtttatggaggttttgtaatgtatgcatgcttacatagacatgtgtaattaatgaattaacattgaaaaatg 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54919225 cattaaagatcgaatgcacataaaagtggtttatggaggttttgtaacgtatgcatgcttacatagacatgtgtaattaatgaattaacattgaaaaatg 54919126  T
Q  115 gtagcagtctatt 127  Q
    |||||||||||||    
T  54919125 gtagcagtctatt 54919113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 193 - 315
Target Start/End: Complemental strand, 10065196 - 10065070
Alignment:
Q  193 catttataagtaaaaaatgactttttaagtatattgaataactaatgtatccggccacgtttataggttaaatacattaattattgaatatactt----a 288  Q
    |||||||||| |||||||||||||||| ||| ||||||||| ||||||||||| |||  |||||  |||| ||||||||||||||| || ||| |    |    
T  10065196 catttataagcaaaaaatgactttttaggtacattgaataattaatgtatccgaccatatttatgagttagatacattaattattggatgtacctaaaaa 10065097  T
Q  289 gttgttttttgtttataaatgtgaccg 315  Q
    ||||||||||| |||||||||||||||    
T  10065096 gttgttttttgcttataaatgtgaccg 10065070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 190 - 278
Target Start/End: Original strand, 20783696 - 20783784
Alignment:
Q  190 tcacatttataagtaaaaaatgactttttaagtatattgaataactaatgtatccggccacgtttataggttaaatacattaattattg 278  Q
    |||||||||||| ||||||||||||||||||||| ||||||||| ||||||||| |  ||| |||||   |||||||||||||||||||    
T  20783696 tcacatttataaataaaaaatgactttttaagtacattgaataattaatgtatctgatcacatttatgtattaaatacattaattattg 20783784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 194 - 321
Target Start/End: Complemental strand, 20291911 - 20291780
Alignment:
Q  194 atttataagtaaaaaatgactttttaagtatattgaataactaatgtatccggccacgtttataggttaaatacattaattattgaatatactt----ag 289  Q
    ||||||||| ||||||| ||||||||  | ||||||||||||||||||||| | |    |||||| | | |||||||| ||||| |||||||||    ||    
T  20291911 atttataagcaaaaaataactttttagatttattgaataactaatgtatccagtcgtaattatagatcagatacattagttatttaatatacttaaaaag 20291812  T
Q  290 ttgttttttgtttataaatgtgaccgaaatga 321  Q
    |||||||||| ||||||||||||| |||||||    
T  20291811 ttgttttttgcttataaatgtgactgaaatga 20291780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 190 - 317
Target Start/End: Complemental strand, 38562259 - 38562128
Alignment:
Q  190 tcacatttataagtaaaaaatgactttttaagtatattgaataactaatgtatccggccacgtttataggttaaatacattaattattgaatatactt-- 287  Q
    ||||||||||||| ||||||  | ||||||  || ||||||||| |||||||||||| ||| ||||||||  | |||||||||||||| ||| ||  |      
T  38562259 tcacatttataagcaaaaaacaattttttagatacattgaataattaatgtatccggtcacatttataggacatatacattaattattcaatgtatctaa 38562160  T
Q  288 --agttgttttttgtttataaatgtgaccgaa 317  Q
      |||||||||||| |||||||||||||||||    
T  38562159 caagttgttttttgcttataaatgtgaccgaa 38562128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 125
Target Start/End: Complemental strand, 54922147 - 54922025
Alignment:
Q  4 ttggaaaatggcattaaagatcgaatgcacataaaagtggttta-tggaggttttgtaatgtatgcatgcttacatagacatgtgtaattaatgaattaa 102  Q
    |||||||||| |||||| ||| |||||  || | ||||| |||  |||| |||||||||||| |||||||||| ||||||||||||| |||||||||||     
T  54922147 ttggaaaatgacattaaggattgaatgtgcagagaagtgattttgtggacgttttgtaatgtctgcatgcttagatagacatgtgtagttaatgaattag 54922048  T
Q  103 cattgaaaaatggtagcagtcta 125  Q
    ||| | |||||| ||| ||||||    
T  54922047 catcggaaaatgatagtagtcta 54922025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 20291789 - 20291842
Alignment:
Q  190 tcacatttataagtaaaaaatgactttttaagtatattgaataactaatgtatc 243  Q
    ||||||||||||| ||||||  |||||||||||||||| |||||||||||||||    
T  20291789 tcacatttataagcaaaaaacaactttttaagtatattaaataactaatgtatc 20291842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 23673489 - 23673436
Alignment:
Q  190 tcacatttataagtaaaaaatgactttttaagtatattgaataactaatgtatc 243  Q
    ||||||||||||| ||||||| |||||||| ||||||||||||| |||||||||    
T  23673489 tcacatttataagcaaaaaataactttttaggtatattgaataattaatgtatc 23673436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 193 - 277
Target Start/End: Original strand, 6371925 - 6372009
Alignment:
Q  193 catttataagtaaaaaatgactttttaagtatattgaataactaatgtatccggccacgtttataggttaaatacattaattatt 277  Q
    |||||||||| |||||||||||||||| ||| ||||||||| ||||||||  ||  || ||||| ||||| |||||||| |||||    
T  6371925 catttataagcaaaaaatgactttttaggtacattgaataattaatgtatatggttacatttatgggttagatacattagttatt 6372009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 230 - 282
Target Start/End: Original strand, 17236164 - 17236216
Alignment:
Q  230 ataactaatgtatccggccacgtttataggttaaatacattaattattgaata 282  Q
    |||| |||||||||||| ||| |||||||||||||||||||||||||| ||||    
T  17236164 ataattaatgtatccggtcacatttataggttaaatacattaattattcaata 17236216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 194 - 284
Target Start/End: Complemental strand, 52378803 - 52378713
Alignment:
Q  194 atttataagtaaaaaatgactttttaagtatattgaataactaatgtatccggccacgtttataggttaaatacattaattattgaatata 284  Q
    ||||||||| ||||||||||| ||||  |||||||||||| ||||||||  |  ||| |||||  |||| ||||||||||||||| |||||    
T  52378803 atttataagcaaaaaatgactctttagatatattgaataattaatgtatttgatcacatttatgagttagatacattaattattggatata 52378713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 7277549 - 7277496
Alignment:
Q  190 tcacatttataagtaaaaaatgactttttaagtatattgaataactaatgtatc 243  Q
    |||||||||||||  ||||| |||||||||||| |||||||||||| |||||||    
T  7277549 tcacatttataagcgaaaaacgactttttaagtttattgaataactcatgtatc 7277496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 189 - 238
Target Start/End: Complemental strand, 30920843 - 30920794
Alignment:
Q  189 ttcacatttataagtaaaaaatgactttttaagtatattgaataactaat 238  Q
    |||||||||||||| ||||||| | ||||||||| |||||||||||||||    
T  30920843 ttcacatttataagcaaaaaataattttttaagtttattgaataactaat 30920794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 44626530 - 44626477
Alignment:
Q  190 tcacatttataagtaaaaaatgactttttaagtatattgaataactaatgtatc 243  Q
    |||||| |||||| ||||||||||||||||| ||||||||||||  ||||||||    
T  44626530 tcacatatataagcaaaaaatgactttttaaatatattgaataatcaatgtatc 44626477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 193 - 313
Target Start/End: Original strand, 23673367 - 23673490
Alignment:
Q  193 catttataagtaaaaaatgactttttaagtatattgaataactaatgtatccggccacgtttataggttaaatacattaattattgaatatactt----a 288  Q
    |||||||||| ||||||| ||||||||| || || |||||| ||||||||  || ||| | |||| || | |||||||||||||| ||||||| |    |    
T  23673367 catttataagcaaaaaataactttttaa-tacatcgaataattaatgtatttggtcacatatatatgtcagatacattaattattcaatatacctaaaaa 23673465  T
Q  289 gttgttttttgtttataaatgtgac 313  Q
    ||| ||||||| |||||||||||||    
T  23673466 gttattttttgcttataaatgtgac 23673490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 284
Target Start/End: Original strand, 44626428 - 44626498
Alignment:
Q  214 tttttaagtatattgaataactaatgtatccggccacgtttataggttaaatacattaattattgaatata 284  Q
    |||||||||||||||||||| |||| |||  || ||| || |||||||| ||||||| |||||| ||||||    
T  44626428 tttttaagtatattgaataattaatttatgtggtcacattcataggttagatacattgattattcaatata 44626498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 52840275 - 52840328
Alignment:
Q  190 tcacatttataagtaaaaaatgactttttaagtatattgaataactaatgtatc 243  Q
    ||||||||||||| ||||||| | |||||||||| ||| ||||| |||||||||    
T  52840275 tcacatttataagcaaaaaataattttttaagtacattaaataattaatgtatc 52840328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 317
Target Start/End: Complemental strand, 2181601 - 2181573
Alignment:
Q  289 gttgttttttgtttataaatgtgaccgaa 317  Q
    |||||||||||||||||||||||||||||    
T  2181601 gttgttttttgtttataaatgtgaccgaa 2181573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 190 - 242
Target Start/End: Complemental strand, 39993175 - 39993123
Alignment:
Q  190 tcacatttataagtaaaaaatgactttttaagtatattgaataactaatgtat 242  Q
    ||||||||||||||||||||| ||||||||  |  ||||||||| ||||||||    
T  39993175 tcacatttataagtaaaaaataactttttagattcattgaataattaatgtat 39993123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 67; Significance: 1e-29; HSPs: 17)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 178 - 317
Target Start/End: Complemental strand, 8900939 - 8900796
Alignment:
Q  178 tattctctttgttcacatttataagtaaaaaatgactttttaagtatattgaataactaatgtatccggccacgtttataggttaaatacattaattatt 277  Q
    |||||||| || | ||||||||||||||||||| |||||||| ||||||||||||| |||||||||||| ||| ||||||||||| ||||||||||||||    
T  8900939 tattctctctggtaacatttataagtaaaaaattactttttaggtatattgaataattaatgtatccggtcacatttataggttagatacattaattatt 8900840  T
Q  278 gaatatactt----agttgttttttgtttataaatgtgaccgaa 317  Q
     ||| ||| |    |||||||| ||  |||||||||||||||||    
T  8900839 caatgtacctaaaaagttgtttattacttataaatgtgaccgaa 8900796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 191 - 317
Target Start/End: Complemental strand, 41944902 - 41944772
Alignment:
Q  191 cacatttataagtaaaaaatgactttttaagtatattgaataactaatgtatccggccacgtttataggttaaatacattaattattgaatatactt--- 287  Q
    |||||||||||| ||| ||||| |||||||||| | ||||||| ||||||| |||| ||| ||||| ||||| ||||||||||||||| |||||| |       
T  41944902 cacatttataagcaaataatgattttttaagtacaatgaataattaatgtacccggtcacatttatgggttagatacattaattattggatatacctaaa 41944803  T
Q  288 -agttgttttttgtttataaatgtgaccgaa 317  Q
     |||||||||||| |||||||||||||||||    
T  41944802 aagttgttttttgcttataaatgtgaccgaa 41944772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 190 - 315
Target Start/End: Complemental strand, 35489330 - 35489201
Alignment:
Q  190 tcacatttataagtaaaaaatgactttttaagtatattgaataactaatgtatccggccacgtttataggttaaatacattaattattgaatatactt-- 287  Q
    ||||||||||||| |||||||||||||||| ||| ||||||||| ||||| ||| ||  |  ||||||||||| |||||||||||||| ||| ||  |      
T  35489330 tcacatttataagcaaaaaatgactttttatgtacattgaataattaatgaatctggtgatatttataggttagatacattaattattcaatgtatctaa 35489231  T
Q  288 --agttgttttttgtttataaatgtgaccg 315  Q
      |||||||||||| |||||||||||||||    
T  35489230 aaagttgttttttgattataaatgtgaccg 35489201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 194 - 312
Target Start/End: Complemental strand, 5368903 - 5368782
Alignment:
Q  194 atttataagtaaaaaatgactttttaagtatattgaataactaatgtatccggccacgtttataggttaaatacattaattattgaatatactt---agt 290  Q
    ||||||||| ||||| | ||||||||  |  ||||||||| |||||||||||| ||| ||||| ||||| ||||||||||||||| || ||| |   |||    
T  5368903 atttataagcaaaaattaactttttagatgcattgaataattaatgtatccggtcacatttatgggttagatacattaattattggatgtacataaaagt 5368804  T
Q  291 tgttttttgtttataaatgtga 312  Q
    | ||||||| ||||||||||||    
T  5368803 tattttttgcttataaatgtga 5368782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 178 - 277
Target Start/End: Complemental strand, 37247717 - 37247618
Alignment:
Q  178 tattctctttgttcacatttataagtaaaaaatgactttttaagtatattgaataactaatgtatccggccacgtttataggttaaatacattaattatt 277  Q
    |||||| |||| ||||||||||||||||||||| ||||||||| || ||| ||||| |||  ||| | |  || ||||||||||| ||||||||||||||    
T  37247717 tattctttttggtcacatttataagtaaaaaataactttttaaatacatttaataattaacatatacagttacatttataggttagatacattaattatt 37247618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 194 - 313
Target Start/End: Original strand, 5700043 - 5700168
Alignment:
Q  194 atttataagtaaaaaatgactttttaagtata--ttgaataactaatgtatccggccacgtttataggttaaatacattaattattgaatatactt---- 287  Q
    ||||||||| |||||||  |||||||| ||||  |||||||| |||||||||||  ||  ||||||| | |||| ||||||||||| ||| |||||        
T  5700043 atttataagcaaaaaatagctttttaattatatattgaataattaatgtatccgatcatatttatagatcaaatgcattaattattcaatgtacttaaaa 5700142  T
Q  288 agttgttttttgtttataaatgtgac 313  Q
    |||||||||||| |||||||||||||    
T  5700143 agttgttttttgcttataaatgtgac 5700168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 214 - 314
Target Start/End: Original strand, 49166639 - 49166743
Alignment:
Q  214 tttttaagtatattgaataactaatgtatccggccacgtttataggttaaatacattaattattgaatatactt----agttgttttttgtttataaatg 309  Q
    |||||| ||| ||| ||||| |||||||||| | ||| ||||||||||| |||||||||||||| ||| ||  |    |||||||||||| |||||||||    
T  49166639 tttttaggtacattaaataattaatgtatccagtcacatttataggttagatacattaattattcaatgtaactaaaaagttgttttttgcttataaatg 49166738  T
Q  310 tgacc 314  Q
    |||||    
T  49166739 tgacc 49166743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 190 - 241
Target Start/End: Complemental strand, 51171389 - 51171338
Alignment:
Q  190 tcacatttataagtaaaaaatgactttttaagtatattgaataactaatgta 241  Q
    ||||||||||||||||||||| |||||||||||  ||| |||||||||||||    
T  51171389 tcacatttataagtaaaaaataactttttaagttcattaaataactaatgta 51171338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 242
Target Start/End: Original strand, 882933 - 882985
Alignment:
Q  190 tcacatttataagtaaaaaatgactttttaagtatattgaataactaatgtat 242  Q
    |||||||||||||||||| || |||||||| ||  ||||||||||||||||||    
T  882933 tcacatttataagtaaaatataactttttaggttcattgaataactaatgtat 882985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 242
Target Start/End: Complemental strand, 4604971 - 4604919
Alignment:
Q  190 tcacatttataagtaaaaaatgactttttaagtatattgaataactaatgtat 242  Q
    ||||||||||||| ||||||| |||||||| || ||||||||| |||||||||    
T  4604971 tcacatttataagcaaaaaatcactttttaggtttattgaatacctaatgtat 4604919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 315
Target Start/End: Original strand, 24419540 - 24419669
Alignment:
Q  190 tcacatttataagtaaaaaatgactttttaagtatattgaataactaatgtatccggccacgtttataggttaaatacattaattattgaatatactta- 288  Q
    ||||||||||||| ||||||  ||||||||  |  |||||| ||||||||||||| | ||   ||||| || | |||||||||||||| ||| ||| ||     
T  24419540 tcacatttataagcaaaaaagaactttttagattcattgaagaactaatgtatccagtcataattataagtcagatacattaattattcaatgtacctaa 24419639  T
Q  289 ---gttgttttttgtttataaatgtgaccg 315  Q
       ||||||||||| |||||||||||||||    
T  24419640 aaagttgttttttgcttataaatgtgaccg 24419669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 190 - 277
Target Start/End: Original strand, 5346969 - 5347056
Alignment:
Q  190 tcacatttataagtaaaaaatgactttttaagtatattgaataactaatgtatccggccacgtttataggttaaatacattaattatt 277  Q
    ||||||||||||| |||||||| |||||||  || ||||||||| ||||||||||   ||| ||||||  ||| ||| ||||||||||    
T  5346969 tcacatttataagcaaaaaatgtctttttagatacattgaataattaatgtatccattcacatttatatattagatatattaattatt 5347056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 242
Target Start/End: Original strand, 21945059 - 21945117
Alignment:
Q  184 ctttgttcacatttataagtaaaaaatgactttttaagtatattgaataactaatgtat 242  Q
    ||||| ||||||||||||||||||||| ||||||||  |  |||||||| |||||||||    
T  21945059 ctttgatcacatttataagtaaaaaatcactttttagattcattgaatacctaatgtat 21945117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 239
Target Start/End: Complemental strand, 5700167 - 5700118
Alignment:
Q  190 tcacatttataagtaaaaaatgactttttaagtatattgaataactaatg 239  Q
    ||||||||||||| ||||||  |||||||||||| ||||||||| |||||    
T  5700167 tcacatttataagcaaaaaacaactttttaagtacattgaataattaatg 5700118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 8900801 - 8900854
Alignment:
Q  190 tcacatttataagtaaaaaatgactttttaagtatattgaataactaatgtatc 243  Q
    |||||||||||||||| |||  |||||||| ||| ||||||||| |||||||||    
T  8900801 tcacatttataagtaataaacaactttttaggtacattgaataattaatgtatc 8900854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 277
Target Start/End: Complemental strand, 11900939 - 11900874
Alignment:
Q  212 actttttaagtatattgaataactaatgtatccggccacgtttataggttaaatacattaattatt 277  Q
    ||||||||  || ||||||||| |||| |||| || ||| ||||||||| ||||||||||||||||    
T  11900939 actttttagatacattgaataattaatatatctggtcacatttataggtcaaatacattaattatt 11900874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 24419666 - 24419613
Alignment:
Q  190 tcacatttataagtaaaaaatgactttttaagtatattgaataactaatgtatc 243  Q
    ||||||||||||| ||||||  |||||||| ||| ||||||||| |||||||||    
T  24419666 tcacatttataagcaaaaaacaactttttaggtacattgaataattaatgtatc 24419613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 65; Significance: 2e-28; HSPs: 7)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 194 - 315
Target Start/End: Complemental strand, 2399829 - 2399704
Alignment:
Q  194 atttataagtaaaaaatgactttttaagtatattgaataactaatgtatccggccacgtttataggttaaatacattaattattgaatatactt----ag 289  Q
    |||||||| |||||||| |||||||||||||||||||||| |||||||||||| ||| |||||| |||| ||||||||| |||| ||| |||||    ||    
T  2399829 atttataaataaaaaataactttttaagtatattgaataattaatgtatccggtcacatttataagttagatacattaactattcaatgtacttagaaag 2399730  T
Q  290 ttgttttttgtttataaatgtgaccg 315  Q
    |||||||||| |||||||||||||||    
T  2399729 ttgttttttgcttataaatgtgaccg 2399704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 190 - 315
Target Start/End: Complemental strand, 34670485 - 34670357
Alignment:
Q  190 tcacatttataagtaaaaaatgactttttaagtatattgaataactaatgtatccggccacgtttataggttaaatacattaattattgaatatactt-- 287  Q
    ||||||||||||| |||||||||| |||||| || ||||||||| |||||||||||  ||| |||||   ||| |||||||||| |||| || ||| |      
T  34670485 tcacatttataagcaaaaaatgac-ttttaaatacattgaataattaatgtatccgatcacatttatgtattagatacattaatgattggatgtacctaa 34670387  T
Q  288 --agttgttttttgtttataaatgtgaccg 315  Q
      |||||||||||| |||||||||||||||    
T  34670386 aaagttgttttttgcttataaatgtgaccg 34670357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 192 - 277
Target Start/End: Original strand, 23097511 - 23097595
Alignment:
Q  192 acatttataagtaaaaaatgactttttaagtatattgaataactaatgtatccggccacgtttataggttaaatacattaattatt 277  Q
    ||||||||||| |||| ||||||||||| ||| |||||| || ||||||||||   ||| |||||| |||||||||||||||||||    
T  23097511 acatttataagcaaaa-atgactttttaggtacattgaacaattaatgtatcccatcacatttataagttaaatacattaattatt 23097595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 190 - 241
Target Start/End: Complemental strand, 3094468 - 3094417
Alignment:
Q  190 tcacatttataagtaaaaaatgactttttaagtatattgaataactaatgta 241  Q
    ||||||||||||||||||||| |||||| | ||  |||||||||||||||||    
T  3094468 tcacatttataagtaaaaaataacttttaaggttcattgaataactaatgta 3094417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 242
Target Start/End: Complemental strand, 2635726 - 2635678
Alignment:
Q  194 atttataagtaaaaaatgactttttaagtatattgaataactaatgtat 242  Q
    ||||||||||||||||  | ||||||| || ||||||||||||||||||    
T  2635726 atttataagtaaaaaacaattttttaaatacattgaataactaatgtat 2635678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 277
Target Start/End: Complemental strand, 15996214 - 15996162
Alignment:
Q  225 attgaataactaatgtatccggccacgtttataggttaaatacattaattatt 277  Q
    ||||||||| ||||||||||   ||||||||||||| | ||||||||||||||    
T  15996214 attgaataattaatgtatccaatcacgtttataggtcagatacattaattatt 15996162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 190 - 245
Target Start/End: Original strand, 45444725 - 45444781
Alignment:
Q  190 tcacatttataagtaaaaaatga-ctttttaagtatattgaataactaatgtatccg 245  Q
    ||||||||||||| ||||||  | |||||||||| ||||||||||||||||| ||||    
T  45444725 tcacatttataagcaaaaaaacaactttttaagtttattgaataactaatgtttccg 45444781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 56; Significance: 4e-23; HSPs: 9)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 190 - 285
Target Start/End: Complemental strand, 43445163 - 43445068
Alignment:
Q  190 tcacatttataagtaaaaaatgactttttaagtatattgaataactaatgtatccggccacgtttataggttaaatacattaattattgaatatac 285  Q
    |||||||| |||| ||||||||| |||||| ||| ||||||||| |||||||||||| ||| ||||| ||||| ||||||||||||||||||||||    
T  43445163 tcacatttgtaagcaaaaaatgattttttatgtacattgaataattaatgtatccggtcacatttatgggttagatacattaattattgaatatac 43445068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 190 - 315
Target Start/End: Complemental strand, 41517497 - 41517368
Alignment:
Q  190 tcacatttataagtaaaaaatgactttttaagtatattgaataactaatgtatccggccacgtttataggttaaatacattaattattgaatatactt-- 287  Q
    ||||||||||||| ||||||| |||||||||||| ||||||||| |||||||||||  ||| ||||| ||||| ||||||||||| ||| || ||| |      
T  41517497 tcacatttataagcaaaaaataactttttaagtacattgaataattaatgtatccgatcacatttatgggttagatacattaattcttggatgtacctaa 41517398  T
Q  288 --agttgttttttgtttataaatgtgaccg 315  Q
      ||||| |||||| |||||||||||||||    
T  41517397 aaagttggtttttgcttataaatgtgaccg 41517368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 190 - 276
Target Start/End: Original strand, 27279494 - 27279580
Alignment:
Q  190 tcacatttataagtaaaaaatgactttttaagtatattgaataactaatgtatccggccacgtttataggttaaatacattaattat 276  Q
    ||||||||||||| ||||||| | |||||| ||  |||||||||||||||||||||  ||   |||||||| | |||||||||||||    
T  27279494 tcacatttataagcaaaaaataattttttaggttcattgaataactaatgtatccgatcataattataggtcagatacattaattat 27279580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 194 - 246
Target Start/End: Complemental strand, 41221758 - 41221706
Alignment:
Q  194 atttataagtaaaaaatgactttttaagtatattgaataactaatgtatccgg 246  Q
    ||||||||||||||||| | |||||| ||  ||||||||||||||||||||||    
T  41221758 atttataagtaaaaaataaatttttaggttcattgaataactaatgtatccgg 41221706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 225 - 284
Target Start/End: Original strand, 33956328 - 33956387
Alignment:
Q  225 attgaataactaatgtatccggccacgtttataggttaaatacattaattattgaatata 284  Q
    ||||||||| |||||||||||| ||  |||||| |||| |||||||||||||| ||||||    
T  33956328 attgaataattaatgtatccggtcatatttataagttagatacattaattattcaatata 33956387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 29168633 - 29168580
Alignment:
Q  190 tcacatttataagtaaaaaatgactttttaagtatattgaataactaatgtatc 243  Q
    ||||||||||||| ||||||| ||||||||| || ||| ||||| |||||||||    
T  29168633 tcacatttataagcaaaaaataactttttaaatacattaaataattaatgtatc 29168580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 33956419 - 33956366
Alignment:
Q  190 tcacatttataagtaaaaaatgactttttaagtatattgaataactaatgtatc 243  Q
    ||||||||||||| ||||||| | ||||||  |||||||||||| |||||||||    
T  33956419 tcacatttataagaaaaaaataaatttttagatatattgaataattaatgtatc 33956366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 190 - 242
Target Start/End: Original strand, 472419 - 472471
Alignment:
Q  190 tcacatttataagtaaaaaatgactttttaagtatattgaataactaatgtat 242  Q
    ||||||||||||  |||| || |||||||| || |||||||||||||||||||    
T  472419 tcacatttataaacaaaatataactttttaggtttattgaataactaatgtat 472471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 190 - 315
Target Start/End: Original strand, 29168507 - 29168636
Alignment:
Q  190 tcacatttataagtaaaaaatgactttttaagtatattgaataactaatgtatccggccacgtttataggttaaatacattaattattgaatatactta- 288  Q
    ||||| ||||||||||||||  |||||||| ||  |  |||||||||||  ||| || ||| |||||| || | |||||||||||||| ||| || |||     
T  29168507 tcacagttataagtaaaaaacaactttttaggttcaacgaataactaatacatctggtcacatttataagtaagatacattaattatttaatgtatttaa 29168606  T
Q  289 ---gttgttttttgtttataaatgtgaccg 315  Q
       ||| ||||||| |||||||||||||||    
T  29168607 aaagttattttttgcttataaatgtgaccg 29168636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 55; Significance: 1e-22; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 190 - 283
Target Start/End: Complemental strand, 9910628 - 9910535
Alignment:
Q  190 tcacatttataagtaaaaaa-tgactttttaagtatattgaataactaatgtatccggccacgtttataggttaaatacattaattattgaatat 283  Q
    |||||||||||||||||||| ||| |||||| ||||||||||||| |||||||||||| ||| ||||||||||| |||||||||||||| |||||    
T  9910628 tcacatttataagtaaaaaaatgattttttaggtatattgaataattaatgtatccggtcac-tttataggttagatacattaattattcaatat 9910535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 190 - 277
Target Start/End: Complemental strand, 26296342 - 26296255
Alignment:
Q  190 tcacatttataagtaaaaaatgactttttaagtatattgaataactaatgtatccggccacgtttataggttaaatacattaattatt 277  Q
    ||||||||||||||||||||||| ||||||| || ||||||||| ||| |||| | | ||| ||||||| ||||||||||||||||||    
T  26296342 tcacatttataagtaaaaaatgattttttaaatacattgaataattaacgtatacagtcacatttatagattaaatacattaattatt 26296255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 194 - 277
Target Start/End: Original strand, 862833 - 862916
Alignment:
Q  194 atttataagtaaaaaatgactttttaagtatattgaataactaatgtatccggccacgtttataggttaaatacattaattatt 277  Q
    ||||||||| ||||| |||||||||| ||| |||||||||||  ||||||| | ||| ||||||||||| ||||||||||||||    
T  862833 atttataagcaaaaattgactttttaggtacattgaataactggtgtatccagtcacatttataggttagatacattaattatt 862916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 190 - 277
Target Start/End: Complemental strand, 16260756 - 16260669
Alignment:
Q  190 tcacatttataagtaaaaaatgactttttaagtatattgaataactaatgtatccggccacgtttataggttaaatacattaattatt 277  Q
    ||||||||||||| ||||||| | |||||| ||||||||||||| |||||||| | | ||| ||||||||||| | ||||||||||||    
T  16260756 tcacatttataagaaaaaaattattttttacgtatattgaataattaatgtattcagtcacatttataggttagagacattaattatt 16260669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 194 - 258
Target Start/End: Original strand, 24252896 - 24252961
Alignment:
Q  194 atttataagtaaaa-aatgactttttaagtatattgaataactaatgtatccggccacgtttatag 258  Q
    |||||||||||||| |||||||||||||||||||||||||| |||||||| ||| ||| |||||||    
T  24252896 atttataagtaaaaaaatgactttttaagtatattgaataattaatgtattcggtcacatttatag 24252961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 192 - 288
Target Start/End: Original strand, 31159086 - 31159182
Alignment:
Q  192 acatttataagtaaaaaatgactttttaagtatattgaataactaatgtatccggccacgtttataggttaaatacattaattattgaatatactta 288  Q
    |||||||||||||||||||   |||||| ||  ||||||||| |||||||| ||| ||| |||||| |||| |||||||| ||||| ||||||||||    
T  31159086 acatttataagtaaaaaatacatttttatgttcattgaataattaatgtattcggtcacatttatatgttagatacattagttattcaatatactta 31159182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 190 - 272
Target Start/End: Original strand, 5069947 - 5070029
Alignment:
Q  190 tcacatttataagtaaaaaatgactttttaagtatattgaataactaatgtatccggccacgtttataggttaaatacattaa 272  Q
    ||||||||||||| ||||||  ||||||||  || ||||||||| |||||||||||||||  || |||||||| |||||||||    
T  5069947 tcacatttataagcaaaaaacaactttttagatacattgaataattaatgtatccggccatattaataggttagatacattaa 5070029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 243
Target Start/End: Complemental strand, 31159186 - 31159157
Alignment:
Q  214 tttttaagtatattgaataactaatgtatc 243  Q
    ||||||||||||||||||||||||||||||    
T  31159186 tttttaagtatattgaataactaatgtatc 31159157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 190 - 242
Target Start/End: Original strand, 3846438 - 3846490
Alignment:
Q  190 tcacatttataagtaaaaaatgactttttaagtatattgaataactaatgtat 242  Q
    ||||||||||||| ||||||| | |||||||||  ||||||||| ||||||||    
T  3846438 tcacatttataagcaaaaaataattttttaagttcattgaataaataatgtat 3846490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0514 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0514
Description:

Target: scaffold0514; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 190 - 278
Target Start/End: Original strand, 5827 - 5915
Alignment:
Q  190 tcacatttataagtaaaaaatgactttttaagtatattgaataactaatgtatccggccacgtttataggttaaatacattaattattg 278  Q
    ||||||||||||| |||||||||||||||| ||| |||||||||||||||||||||| ||  || |||||||| ||||||| |||||||    
T  5827 tcacatttataagcaaaaaatgactttttaggtacattgaataactaatgtatccggtcatcttcataggttagatacattgattattg 5915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 50; Significance: 1e-19; HSPs: 12)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 190 - 312
Target Start/End: Complemental strand, 6590916 - 6590790
Alignment:
Q  190 tcacatttataagtaaaaaatgactttttaagtatattgaataactaatgtatccggccacgtttataggttaaatacattaattattgaatatactt-- 287  Q
    ||||||||||||| ||||||| |||||||| ||| ||||||||| |||||||||||| ||  ||||| ||||| ||||||| ||||||| || ||| |      
T  6590916 tcacatttataagcaaaaaattactttttaggtacattgaataattaatgtatccggtcatatttatgggttagatacattgattattggatgtacctaa 6590817  T
Q  288 --agttgttttttgtttataaatgtga 312  Q
      |||||||||||| ||||||||||||    
T  6590816 gaagttgttttttgcttataaatgtga 6590790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 194 - 278
Target Start/End: Complemental strand, 14113342 - 14113258
Alignment:
Q  194 atttataagtaaaaaatgactttttaagtatattgaataactaatgtatccggccacgtttataggttaaatacattaattattg 278  Q
    |||| |||||||||||||||||||||  || ||||||||| |||||||| ||| ||| ||||| ||||| |||||||||||||||    
T  14113342 atttctaagtaaaaaatgactttttagatacattgaataattaatgtatacggtcacatttatgggttagatacattaattattg 14113258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 194 - 278
Target Start/End: Complemental strand, 6649202 - 6649118
Alignment:
Q  194 atttataagtaaaaaatgactttttaagtatattgaataactaatgtatccggccacgtttataggttaaatacattaattattg 278  Q
    ||||||||| |||||||||||||||| ||| ||||||||| |||||||||||| ||  || || ||||| ||||||| |||||||    
T  6649202 atttataagcaaaaaatgactttttaggtacattgaataattaatgtatccggtcatattcatgggttagatacattgattattg 6649118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 190 - 278
Target Start/End: Original strand, 44329164 - 44329252
Alignment:
Q  190 tcacatttataagtaaaaaatgactttttaagtatattgaataactaatgtatccggccacgtttataggttaaatacattaattattg 278  Q
    ||||| ||||||| ||||||||| ||||||| || ||||||||| ||||||||  || ||| ||||| ||||| |||||||||||||||    
T  44329164 tcacaattataagcaaaaaatgattttttaaatacattgaataattaatgtatttggtcacatttatgggttagatacattaattattg 44329252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 194 - 314
Target Start/End: Original strand, 30542473 - 30542596
Alignment:
Q  194 atttataagtaaaaaatgactttttaagtatattgaataactaatgtatccggccacgtttataggttaaatacattaattattgaatatactt----ag 289  Q
    |||||||| |||||||||| |||||||||||||||||||| |||| |||  ||  || |||| |||||||||| |||||||||| ||| |||||    |     
T  30542473 atttataactaaaaaatga-tttttaagtatattgaataattaatatatttggttacatttaaaggttaaatatattaattattcaatgtacttaaaaaa 30542571  T
Q  290 ttgttttttgtttataaatgtgacc 314  Q
    ||||||||| ||||||||| |||||    
T  30542572 ttgttttttatttataaatatgacc 30542596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 190 - 277
Target Start/End: Complemental strand, 30358713 - 30358623
Alignment:
Q  190 tcacatttataagtaaaaaatgactttttaagtatattgaataactaatgtatccggccacgtttataggttaa----atacattaattatt 277  Q
    ||||||||||||| ||||||  |||||||| ||||||||||||| |||||||||||| ||| ||||||| ||||    ||||||||||||||    
T  30358713 tcacatttataag-aaaaaacaactttttaggtatattgaataaataatgtatccggtcacatttatagattaattagatacattaattatt 30358623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 190 - 277
Target Start/End: Original strand, 1784096 - 1784183
Alignment:
Q  190 tcacatttataagtaaaaaatgactttttaagtatattgaataactaatgtatccggccacgtttataggttaaatacattaattatt 277  Q
    ||||||||||||  ||||||||| ||||||  || ||||||||  |||||||||||| ||  ||||| ||||| ||||||||||||||    
T  1784096 tcacatttataaacaaaaaatgattttttagatacattgaatatttaatgtatccggtcatatttatgggttagatacattaattatt 1784183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 277
Target Start/End: Complemental strand, 24185648 - 24185578
Alignment:
Q  207 aaatgactttttaagtatattgaataactaatgtatccggccacgtttataggttaaatacattaattatt 277  Q
    |||||| |||||| ||| ||||||||| |||||||||| | ||| ||||||||||| ||| ||||||||||    
T  24185648 aaatgattttttaggtacattgaataattaatgtatccagtcacatttataggttagatatattaattatt 24185578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 242
Target Start/End: Original strand, 2602060 - 2602112
Alignment:
Q  190 tcacatttataagtaaaaaatgactttttaagtatattgaataactaatgtat 242  Q
    ||||||||||||||||||||| | ||||||||| |||| ||||| ||||||||    
T  2602060 tcacatttataagtaaaaaataattttttaagtttattaaataattaatgtat 2602112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 6616643 - 6616590
Alignment:
Q  190 tcacatttataagtaaaaaatgactttttaagtatattgaataactaatgtatc 243  Q
    ||||||||||||| ||||||||| |||||| ||| || |||||| |||||||||    
T  6616643 tcacatttataagcaaaaaatgattttttaggtacatggaataattaatgtatc 6616590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 27988086 - 27988139
Alignment:
Q  190 tcacatttataagtaaaaaatgactttttaagtatattgaataactaatgtatc 243  Q
    ||||||||||||| ||||||  |||||||||||  ||||||||| |||||||||    
T  27988086 tcacatttataagcaaaaaacaactttttaagttcattgaataagtaatgtatc 27988139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 28045388 - 28045441
Alignment:
Q  190 tcacatttataagtaaaaaatgactttttaagtatattgaataactaatgtatc 243  Q
    ||||||||||||| ||||||  |||||||||||  ||||||||| |||||||||    
T  28045388 tcacatttataagcaaaaaacaactttttaagttcattgaataagtaatgtatc 28045441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 49; Significance: 5e-19; HSPs: 12)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 192 - 284
Target Start/End: Complemental strand, 30046438 - 30046346
Alignment:
Q  192 acatttataagtaaaaaatgactttttaagtatattgaataactaatgtatccggccacgtttataggttaaatacattaattattgaatata 284  Q
    ||||||||||| ||||||| || |||||  || ||||||||| |||||||||||||||| ||||||||||| ||||||||| |||| ||||||    
T  30046438 acatttataagcaaaaaatcacattttagatacattgaataattaatgtatccggccacatttataggttagatacattaactattcaatata 30046346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 190 - 288
Target Start/End: Complemental strand, 14509954 - 14509856
Alignment:
Q  190 tcacatttataagtaaaaaatgactttttaagtatattgaataactaatgtatccggccacgtttataggttaaatacattaattattgaatatactta 288  Q
    |||||||||||| |||||||| | ||||||  |||||||||||| ||||||||||   ||  |||||  ||||||||||||||||||||||| ||||||    
T  14509954 tcacatttataaataaaaaataattttttagatatattgaataattaatgtatccaatcatatttatgagttaaatacattaattattgaatgtactta 14509856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 190 - 284
Target Start/End: Original strand, 28499789 - 28499883
Alignment:
Q  190 tcacatttataagtaaaaaatgactttttaagtatattgaataactaatgtatccggccacgtttataggttaaatacattaattattgaatata 284  Q
    ||||||||||||| ||||||| | ||||||  |  |||||||||||||||||||||| ||   |||||| |||||||||||||||||| ||||||    
T  28499789 tcacatttataagcaaaaaataattttttagattcattgaataactaatgtatccggtcataattatagattaaatacattaattattcaatata 28499883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 190 - 277
Target Start/End: Original strand, 8355556 - 8355643
Alignment:
Q  190 tcacatttataagtaaaaaatgactttttaagtatattgaataactaatgtatccggccacgtttataggttaaatacattaattatt 277  Q
    ||||||||||||||||||| |||  |||||| |||||| ||||| |||||||||||  ||| |||||| |||  ||||||||||||||    
T  8355556 tcacatttataagtaaaaattgatattttaaatatattaaataattaatgtatccgatcacatttatatgttggatacattaattatt 8355643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 206 - 315
Target Start/End: Original strand, 14751148 - 14751261
Alignment:
Q  206 aaaatgactttttaagtatattgaataactaatgtatccggccacgtttataggttaaatacattaattattgaatatactt----agttgttttttgtt 301  Q
    |||||||||||||| ||  ||||||||| |||||||||| |  || ||||||||||| |||||| || |||| ||| ||| |    |||||||||||| |    
T  14751148 aaaatgactttttaggtgcattgaataattaatgtatccagttacatttataggttagatacatcaactattcaatgtacctaaaaagttgttttttgct 14751247  T
Q  302 tataaatgtgaccg 315  Q
    ||||||||||||||    
T  14751248 tataaatgtgaccg 14751261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 190 - 271
Target Start/End: Complemental strand, 11089426 - 11089345
Alignment:
Q  190 tcacatttataagtaaaaaatgactttttaagtatattgaataactaatgtatccggccacgtttataggttaaatacatta 271  Q
    ||||||||||||||||||||| | |||||||||  || |||||| |||| | ||||| ||| |||||| |||| ||||||||    
T  11089426 tcacatttataagtaaaaaataattttttaagttcatcgaataattaatatttccggtcacatttatatgttagatacatta 11089345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 18200668 - 18200721
Alignment:
Q  190 tcacatttataagtaaaaaatgactttttaagtatattgaataactaatgtatc 243  Q
    ||||||||||||| ||||| | | ||||||||| ||||||||||||||||||||    
T  18200668 tcacatttataagcaaaaattaattttttaagtttattgaataactaatgtatc 18200721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 278
Target Start/End: Complemental strand, 8568009 - 8567921
Alignment:
Q  190 tcacatttataagtaaaaaatgactttttaagtatattgaataactaatgtatccggccacgtttataggttaaatacattaattattg 278  Q
    ||||||||||||  ||||||||| ||||||| || ||||||||| |||||||||  | ||| |||||  |||  |||||||||||||||    
T  8568009 tcacatttataaacaaaaaatgattttttaaatacattgaataattaatgtatcttgtcacatttatgagttggatacattaattattg 8567921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 197 - 281
Target Start/End: Complemental strand, 19522644 - 19522560
Alignment:
Q  197 tataagtaaaaaatgactttttaagtatattgaataactaatgtatccggccacgtttataggttaaatacattaattattgaat 281  Q
    ||||| ||||||||||||||||| ||| ||| ||||| |||| |||  |  ||| ||||| ||||| ||||||||||||||||||    
T  19522644 tataaataaaaaatgactttttaggtacattaaataattaatatatttgatcacatttatgggttagatacattaattattgaat 19522560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 190 - 242
Target Start/End: Complemental strand, 28499914 - 28499863
Alignment:
Q  190 tcacatttataagtaaaaaatgactttttaagtatattgaataactaatgtat 242  Q
    ||||||||||||| ||||||| ||||||||  |||||||||||| ||||||||    
T  28499914 tcacatttataag-aaaaaataactttttagatatattgaataattaatgtat 28499863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 246
Target Start/End: Original strand, 35463964 - 35464016
Alignment:
Q  194 atttataagtaaaaaatgactttttaagtatattgaataactaatgtatccgg 246  Q
    ||||||||| ||||||| | |||||| ||  ||||||||||||||||||||||    
T  35463964 atttataagcaaaaaataattttttaggttcattgaataactaatgtatccgg 35464016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 190 - 242
Target Start/End: Complemental strand, 43221694 - 43221642
Alignment:
Q  190 tcacatttataagtaaaaaatgactttttaagtatattgaataactaatgtat 242  Q
    ||||||||||||| ||||||| |||||||| || ||||||| || ||||||||    
T  43221694 tcacatttataagcaaaaaataactttttaggtttattgaaaaattaatgtat 43221642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 7)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 190 - 317
Target Start/End: Original strand, 16867625 - 16867756
Alignment:
Q  190 tcacatttataagtaaaaaatgactttttaagtatattgaataactaatgtatccggccacgtttataggttaaatacattaattattgaatatactt-- 287  Q
    ||||||||||||| ||||||  |||||||| ||| ||||||||||||||| || ||| ||  ||||| ||||| |||||| |||||||| || ||| |      
T  16867625 tcacatttataagcaaaaaacaactttttaggtacattgaataactaatgcattcggtcatatttatgggttagatacatcaattattggatgtacctaa 16867724  T
Q  288 --agttgttttttgtttataaatgtgaccgaa 317  Q
      |||||||||||| |||||||||||| ||||    
T  16867725 aaagttgttttttgcttataaatgtgatcgaa 16867756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 190 - 321
Target Start/End: Original strand, 29212850 - 29212985
Alignment:
Q  190 tcacatttataagtaaaaaatgactttttaagtatattgaataactaatgtatccggccacgtttataggttaaatacattaattattgaatatactt-- 287  Q
    ||||||||||||||||||||    ||||||  ||||||||||||  ||||||||| | ||| ||||||||| | |||||||||||||| ||| ||| |      
T  29212850 tcacatttataagtaaaaaacatttttttagatatattgaataatcaatgtatccagtcacatttataggtcagatacattaattattcaatgtacctaa 29212949  T
Q  288 --agttgttttttgtttataaatgtgaccgaaatga 321  Q
      |   |||||||| |||||||||||||||||||||    
T  29212950 aaaacagttttttgcttataaatgtgaccgaaatga 29212985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 190 - 317
Target Start/End: Original strand, 18093785 - 18093916
Alignment:
Q  190 tcacatttataagtaaaaaatgactttttaagtatattgaataactaatgtatccggccacgtttataggttaaatacattaattattgaatatactt-- 287  Q
    ||||||||||||  ||||||  | ||||||| || ||||||||| |||||||||  | ||| ||||||||| | |||||||||||||| |||| || |      
T  18093785 tcacatttataaacaaaaaacaaatttttaaatacattgaataattaatgtatcttgtcacatttataggtcagatacattaattattcaataaacctaa 18093884  T
Q  288 --agttgttttttgtttataaatgtgaccgaa 317  Q
      | |||||| ||| |||||||||||||||||    
T  18093885 aaacttgtttattgcttataaatgtgaccgaa 18093916  T

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Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 204 - 310
Target Start/End: Original strand, 10937919 - 10938028
Alignment:
Q  204 aaaaaatgactttttaagtatattgaataactaatgtatccggccacgtttataggttaaatacattaattattgaatatactt----agttgttttttg 299  Q
    ||||||||| |||| || |||||||||||| |||| |||| || ||| ||||||| ||| ||| ||||||||||| ||||||||    |||||||||||     
T  10937919 aaaaaatga-ttttcaaatatattgaataattaatatatcgggtcacatttatagattagatatattaattattggatatacttaaaaagttgttttttt 10938017  T
Q  300 tttataaatgt 310  Q
     ||||||||||    
T  10938018 attataaatgt 10938028  T

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Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 30122088 - 30122035
Alignment:
Q  190 tcacatttataagtaaaaaatgactttttaagtatattgaataactaatgtatc 243  Q
    ||||||||||||| ||||||| | |||||| ||||||||||||| |||||||||    
T  30122088 tcacatttataagcaaaaaataattttttaggtatattgaataattaatgtatc 30122035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 242
Target Start/End: Complemental strand, 25109039 - 25108987
Alignment:
Q  190 tcacatttataagtaaaaaatgactttttaagtatattgaataactaatgtat 242  Q
    ||||||||||||||||||||| | |||||| ||  ||||||||||||||||||    
T  25109039 tcacatttataagtaaaaaataattttttatgttcattgaataactaatgtat 25108987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 268
Target Start/End: Original strand, 27696621 - 27696698
Alignment:
Q  191 cacatttataagtaaaaaatgactttttaagtatattgaataactaatgtatccggccacgtttataggttaaataca 268  Q
    ||||||||||| |||||||| ||||||||| | |||| ||||  |||||||||||  ||| |||||| |||| |||||    
T  27696621 cacatttataaataaaaaataactttttaaatttattaaatatttaatgtatccgatcacatttataagttagataca 27696698  T

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Target: scaffold0470 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0470
Description:

Target: scaffold0470; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 5929 - 5876
Alignment:
Q  190 tcacatttataagtaaaaaatgactttttaagtatattgaataactaatgtatc 243  Q
    ||||||||||||| ||||||||| |||||| ||| || |||||| |||||||||    
T  5929 tcacatttataagcaaaaaatgattttttaggtacatggaataattaatgtatc 5876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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