View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20408_low_57 (Length: 220)
Name: NF20408_low_57
Description: NF20408
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20408_low_57 |
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Alignment Details
Target: chr7 (Bit Score: 183; Significance: 4e-99; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 9 - 204
Target Start/End: Original strand, 34844446 - 34844645
Alignment:
| Q |
9 |
attatactatgagacatcggaaagcatttgaatgcaaatttttaacctatatatttgc----gtgtacacttttttacaccaacataggaatcctaaatg |
104 |
Q |
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| T |
34844446 |
attatactatgagacatcggaaagcatttgaatgcaaatttttaacctatatatttgcctgcgtgtacacttttttacaccaacataggaatcctaaatg |
34844545 |
T |
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| Q |
105 |
tttgcgtgtaaacttttttacactaacaattaattcaaattgttgagagaattaagaactgattgaaaataagagaaaatgagagaaaagttgatctatg |
204 |
Q |
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| T |
34844546 |
tttgcgtgtaaacttttttacactaacaattaattcaaattgttgagagaattaagaactgattgaaaataagagaaaatgagagaaaagttgatctatg |
34844645 |
T |
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