View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2040_low_16 (Length: 207)

Name: NF2040_low_16
Description: NF2040
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2040_low_16
NF2040_low_16
[»] chr8 (62 HSPs)
chr8 (20-166)||(29773443-29773589)
chr8 (20-166)||(14498565-14498711)
chr8 (20-165)||(38502183-38502328)
chr8 (20-166)||(36002354-36002500)
chr8 (20-165)||(23286564-23286709)
chr8 (20-165)||(37511087-37511232)
chr8 (21-164)||(28090192-28090334)
chr8 (20-164)||(34332112-34332256)
chr8 (20-164)||(37161504-37161648)
chr8 (23-166)||(15726155-15726298)
chr8 (20-170)||(29229440-29229589)
chr8 (20-162)||(44934901-44935043)
chr8 (20-149)||(10280575-10280704)
chr8 (20-164)||(29459633-29459778)
chr8 (22-162)||(12163207-12163347)
chr8 (22-162)||(12407635-12407775)
chr8 (39-167)||(945973-946100)
chr8 (20-164)||(2273010-2273154)
chr8 (21-165)||(17642073-17642217)
chr8 (20-165)||(23274621-23274767)
chr8 (20-169)||(43049532-43049680)
chr8 (20-164)||(529267-529411)
chr8 (22-166)||(42444482-42444626)
chr8 (21-164)||(37465684-37465827)
chr8 (20-165)||(16323558-16323703)
chr8 (20-164)||(4475046-4475189)
chr8 (20-164)||(26439785-26439930)
chr8 (20-165)||(39347392-39347537)
chr8 (29-165)||(6800044-6800179)
chr8 (22-162)||(2731791-2731933)
chr8 (20-162)||(36886424-36886566)
chr8 (20-162)||(43921127-43921269)
chr8 (82-166)||(19718675-19718759)
chr8 (82-164)||(43485365-43485447)
chr8 (31-166)||(29454481-29454618)
chr8 (83-165)||(27970011-27970093)
chr8 (82-162)||(1043060-1043141)
chr8 (83-164)||(34047742-34047823)
chr8 (95-167)||(17096619-17096690)
chr8 (82-137)||(17792231-17792286)
chr8 (31-165)||(6631178-6631313)
chr8 (95-165)||(40154488-40154557)
chr8 (83-165)||(42165229-42165311)
chr8 (22-166)||(4214758-4214904)
chr8 (83-167)||(29265920-29266005)
chr8 (22-112)||(45452650-45452740)
chr8 (84-151)||(27171927-27171995)
chr8 (20-64)||(39029497-39029541)
chr8 (20-70)||(17069494-17069544)
chr8 (20-70)||(17578729-17578779)
chr8 (95-165)||(43331743-43331812)
chr8 (95-165)||(44309565-44309634)
chr8 (83-164)||(5215646-5215727)
chr8 (118-167)||(12801104-12801153)
chr8 (84-165)||(13483222-13483303)
chr8 (90-162)||(26988719-26988792)
chr8 (83-164)||(32071569-32071650)
chr8 (83-162)||(34633865-34633945)
chr8 (31-68)||(38329722-38329759)
chr8 (22-112)||(40776882-40776972)
chr8 (84-164)||(464141-464221)
chr8 (83-167)||(12633231-12633315)
[»] chr3 (80 HSPs)
chr3 (20-166)||(29786859-29787005)
chr3 (20-166)||(42067577-42067723)
chr3 (20-166)||(35171455-35171601)
chr3 (20-165)||(876484-876629)
chr3 (20-164)||(44670520-44670664)
chr3 (20-166)||(11140245-11140390)
chr3 (20-161)||(29347522-29347663)
chr3 (23-164)||(38785347-38785488)
chr3 (22-165)||(40650066-40650209)
chr3 (20-164)||(42848468-42848614)
chr3 (23-164)||(42364192-42364333)
chr3 (23-166)||(31308875-31309018)
chr3 (20-166)||(44365619-44365768)
chr3 (20-164)||(47948656-47948801)
chr3 (20-167)||(39630152-39630300)
chr3 (23-164)||(45636089-45636229)
chr3 (78-167)||(27082666-27082755)
chr3 (20-103)||(378987-379070)
chr3 (20-167)||(27647475-27647622)
chr3 (22-161)||(46959557-46959694)
chr3 (20-164)||(43715010-43715154)
chr3 (20-166)||(21289075-21289221)
chr3 (90-167)||(27079711-27079788)
chr3 (31-167)||(26885244-26885381)
chr3 (23-131)||(4659789-4659897)
chr3 (20-164)||(19547489-19547633)
chr3 (20-164)||(53516843-53516987)
chr3 (21-128)||(52082285-52082392)
chr3 (21-137)||(45518665-45518781)
chr3 (82-164)||(25592330-25592412)
chr3 (79-161)||(31479559-31479641)
chr3 (21-155)||(32717662-32717796)
chr3 (20-161)||(7671806-7671945)
chr3 (31-166)||(9506901-9507037)
chr3 (31-166)||(9514876-9515012)
chr3 (31-162)||(40477759-40477891)
chr3 (102-155)||(379221-379274)
chr3 (84-164)||(8965915-8965996)
chr3 (31-165)||(32636625-32636761)
chr3 (82-165)||(4663462-4663545)
chr3 (30-133)||(3136301-3136404)
chr3 (20-70)||(37492010-37492059)
chr3 (82-166)||(25482567-25482652)
chr3 (82-165)||(42622173-42622257)
chr3 (31-165)||(7352440-7352575)
chr3 (31-165)||(23456453-23456588)
chr3 (83-165)||(29491662-29491745)
chr3 (31-165)||(44522022-44522156)
chr3 (20-100)||(45290796-45290876)
chr3 (82-164)||(50030075-50030158)
chr3 (20-70)||(788733-788783)
chr3 (83-137)||(34593720-34593774)
chr3 (19-167)||(44568580-44568729)
chr3 (22-56)||(51040091-51040125)
chr3 (23-164)||(29629251-29629389)
chr3 (31-68)||(51756364-51756401)
chr3 (23-172)||(15804250-15804402)
chr3 (82-164)||(46671337-46671420)
chr3 (95-167)||(47470425-47470497)
chr3 (22-70)||(53176841-53176889)
chr3 (83-166)||(4392978-4393061)
chr3 (90-164)||(8433437-8433512)
chr3 (23-70)||(31185695-31185742)
chr3 (23-70)||(39678195-39678242)
chr3 (82-164)||(45636005-45636088)
chr3 (95-165)||(4521607-4521676)
chr3 (83-160)||(5528704-5528782)
chr3 (82-164)||(28718251-28718333)
chr3 (82-112)||(36098924-36098954)
chr3 (84-164)||(40021079-40021160)
chr3 (83-161)||(52776778-52776856)
chr3 (23-56)||(13756572-13756605)
chr3 (83-164)||(35375858-35375939)
chr3 (23-55)||(15670091-15670123)
chr3 (22-70)||(29491738-29491786)
chr3 (22-70)||(37146508-37146556)
chr3 (22-70)||(40473930-40473978)
chr3 (84-166)||(42622607-42622691)
chr3 (95-163)||(47175468-47175535)
chr3 (82-114)||(54262857-54262889)
[»] chr2 (56 HSPs)
chr2 (20-162)||(6884161-6884303)
chr2 (20-167)||(34665568-34665715)
chr2 (20-166)||(4673864-4674010)
chr2 (22-165)||(14533086-14533229)
chr2 (20-164)||(11227627-11227771)
chr2 (20-164)||(42427833-42427977)
chr2 (20-164)||(5091997-5092140)
chr2 (20-166)||(11813458-11813605)
chr2 (20-162)||(5389463-5389605)
chr2 (29-167)||(37083205-37083343)
chr2 (20-167)||(1353504-1353650)
chr2 (20-162)||(33423276-33423420)
chr2 (20-164)||(3383450-3383593)
chr2 (25-165)||(58919-59059)
chr2 (20-165)||(38963326-38963471)
chr2 (21-164)||(12547364-12547507)
chr2 (20-164)||(15771572-15771716)
chr2 (21-164)||(34438448-34438592)
chr2 (20-135)||(40370494-40370609)
chr2 (29-154)||(5420237-5420362)
chr2 (20-166)||(6513526-6513672)
chr2 (21-134)||(6438438-6438551)
chr2 (20-164)||(7467120-7467271)
chr2 (21-162)||(36489360-36489501)
chr2 (20-166)||(11598112-11598259)
chr2 (20-165)||(20212416-20212560)
chr2 (20-164)||(37909379-37909523)
chr2 (22-137)||(19636362-19636477)
chr2 (22-137)||(19834955-19835070)
chr2 (21-70)||(3810725-3810774)
chr2 (31-164)||(45157530-45157664)
chr2 (78-162)||(8371886-8371970)
chr2 (107-163)||(42046076-42046132)
chr2 (22-167)||(30980877-30981021)
chr2 (31-164)||(39620191-39620327)
chr2 (97-164)||(32499150-32499217)
chr2 (83-165)||(8362731-8362813)
chr2 (83-165)||(11088215-11088297)
chr2 (84-165)||(17821530-17821612)
chr2 (83-165)||(25332956-25333038)
chr2 (21-70)||(2859599-2859648)
chr2 (22-166)||(35896676-35896821)
chr2 (29-114)||(37425484-37425570)
chr2 (82-118)||(35310156-35310192)
chr2 (23-63)||(43690285-43690325)
chr2 (90-161)||(12071158-12071229)
chr2 (83-165)||(33493929-33494012)
chr2 (83-164)||(1580566-1580648)
chr2 (83-165)||(42641176-42641258)
chr2 (95-164)||(7069194-7069262)
chr2 (20-53)||(12002462-12002495)
chr2 (29-70)||(18259632-18259673)
chr2 (84-112)||(3261015-3261043)
chr2 (22-70)||(7366602-7366650)
chr2 (83-151)||(15426348-15426416)
chr2 (83-166)||(40533249-40533332)
[»] chr7 (55 HSPs)
chr7 (20-166)||(30862787-30862933)
chr7 (20-166)||(41913357-41913502)
chr7 (20-164)||(3909928-3910072)
chr7 (21-164)||(38129648-38129791)
chr7 (20-162)||(40941877-40942020)
chr7 (20-171)||(41381490-41381641)
chr7 (20-161)||(1691254-1691394)
chr7 (21-165)||(30623984-30624130)
chr7 (20-167)||(42710928-42711075)
chr7 (28-177)||(27956364-27956513)
chr7 (34-167)||(28326678-28326811)
chr7 (20-160)||(21699554-21699691)
chr7 (21-166)||(45857737-45857882)
chr7 (21-164)||(18990091-18990234)
chr7 (78-164)||(41331729-41331815)
chr7 (21-161)||(47748063-47748205)
chr7 (20-164)||(11485996-11486140)
chr7 (20-164)||(44964083-44964227)
chr7 (21-164)||(42974895-42975038)
chr7 (21-161)||(30936355-30936495)
chr7 (20-160)||(31482378-31482518)
chr7 (20-164)||(43750075-43750219)
chr7 (78-165)||(23331699-23331788)
chr7 (20-165)||(43069079-43069223)
chr7 (20-133)||(30317226-30317339)
chr7 (21-137)||(41809229-41809344)
chr7 (20-137)||(20439077-20439194)
chr7 (96-163)||(31903423-31903490)
chr7 (101-164)||(45458698-45458761)
chr7 (83-167)||(1343016-1343100)
chr7 (22-161)||(1806484-1806624)
chr7 (82-160)||(2290794-2290873)
chr7 (81-164)||(9682349-9682432)
chr7 (20-165)||(41311053-41311199)
chr7 (83-137)||(7527074-7527128)
chr7 (83-165)||(8159952-8160034)
chr7 (22-68)||(8770634-8770680)
chr7 (83-167)||(15584864-15584948)
chr7 (20-69)||(46836846-46836895)
chr7 (88-132)||(8770695-8770739)
chr7 (83-165)||(41968747-41968830)
chr7 (83-164)||(6791762-6791844)
chr7 (95-166)||(40331396-40331466)
chr7 (83-164)||(3061902-3061983)
chr7 (83-165)||(13806361-13806443)
chr7 (84-157)||(45232375-45232449)
chr7 (31-68)||(5583134-5583171)
chr7 (95-164)||(11640295-11640363)
chr7 (95-164)||(12395194-12395262)
chr7 (20-53)||(45442167-45442200)
chr7 (85-137)||(428160-428211)
chr7 (82-165)||(15715903-15715987)
chr7 (21-65)||(23585837-23585881)
chr7 (95-167)||(25411964-25412035)
chr7 (23-55)||(35859349-35859381)
[»] chr6 (32 HSPs)
chr6 (20-166)||(26358815-26358961)
chr6 (20-165)||(13390384-13390529)
chr6 (20-164)||(6848510-6848654)
chr6 (20-166)||(32834036-32834182)
chr6 (20-162)||(17545607-17545748)
chr6 (20-154)||(24487549-24487683)
chr6 (20-165)||(8401679-8401823)
chr6 (20-165)||(24212911-24213055)
chr6 (20-162)||(2258905-2259048)
chr6 (28-166)||(4110549-4110687)
chr6 (22-162)||(4901215-4901353)
chr6 (20-164)||(11446736-11446880)
chr6 (21-166)||(15383467-15383612)
chr6 (22-166)||(34196073-34196217)
chr6 (20-166)||(30020620-30020766)
chr6 (20-132)||(17010393-17010505)
chr6 (79-165)||(1096220-1096306)
chr6 (20-163)||(8376286-8376429)
chr6 (31-164)||(8549827-8549961)
chr6 (82-163)||(13719112-13719194)
chr6 (31-164)||(4509430-4509564)
chr6 (31-165)||(243159-243294)
chr6 (83-164)||(7344641-7344722)
chr6 (83-164)||(10888135-10888216)
chr6 (82-166)||(6265258-6265342)
chr6 (82-164)||(9661752-9661835)
chr6 (31-164)||(22755241-22755375)
chr6 (118-166)||(14872686-14872734)
chr6 (31-165)||(9686775-9686910)
chr6 (95-166)||(14501024-14501094)
chr6 (83-161)||(6975025-6975103)
chr6 (83-161)||(35037559-35037636)
[»] chr5 (57 HSPs)
chr5 (22-167)||(6532576-6532721)
chr5 (20-165)||(1661956-1662101)
chr5 (20-162)||(21605650-21605792)
chr5 (20-165)||(6114036-6114181)
chr5 (20-164)||(2029353-2029497)
chr5 (21-165)||(2141241-2141385)
chr5 (20-155)||(3056394-3056529)
chr5 (23-164)||(43237618-43237759)
chr5 (31-162)||(6560828-6560959)
chr5 (20-155)||(18228721-18228856)
chr5 (20-164)||(42917117-42917262)
chr5 (22-161)||(13410545-13410683)
chr5 (20-162)||(24097873-24098015)
chr5 (20-161)||(32467046-32467187)
chr5 (23-165)||(34302645-34302789)
chr5 (21-165)||(2413926-2414067)
chr5 (21-164)||(9534870-9535010)
chr5 (21-165)||(4617975-4618119)
chr5 (20-167)||(29743892-29744040)
chr5 (20-152)||(36752471-36752604)
chr5 (21-165)||(9589208-9589352)
chr5 (21-167)||(13090911-13091057)
chr5 (22-162)||(35817612-35817752)
chr5 (22-165)||(41802105-41802248)
chr5 (21-171)||(14967225-14967375)
chr5 (20-164)||(28332120-28332265)
chr5 (20-164)||(12362620-12362764)
chr5 (20-164)||(21051566-21051710)
chr5 (20-137)||(35682124-35682237)
chr5 (20-161)||(13795532-13795673)
chr5 (20-163)||(2318688-2318831)
chr5 (37-161)||(27116465-27116589)
chr5 (82-166)||(35162349-35162433)
chr5 (20-137)||(37431610-37431731)
chr5 (20-69)||(22780609-22780658)
chr5 (82-161)||(38355040-38355120)
chr5 (20-132)||(36880818-36880930)
chr5 (83-161)||(23408255-23408333)
chr5 (22-112)||(13118854-13118944)
chr5 (20-164)||(36339107-36339253)
chr5 (83-165)||(16432976-16433058)
chr5 (20-70)||(39979464-39979514)
chr5 (95-164)||(36409906-36409974)
chr5 (83-167)||(15725822-15725906)
chr5 (83-163)||(19189107-19189187)
chr5 (89-161)||(43393087-43393159)
chr5 (26-150)||(14096672-14096796)
chr5 (108-167)||(33145210-33145269)
chr5 (20-70)||(1490904-1490954)
chr5 (83-164)||(25929560-25929642)
chr5 (82-164)||(29996510-29996592)
chr5 (83-161)||(31587996-31588074)
chr5 (31-137)||(479945-480053)
chr5 (95-164)||(6335390-6335458)
chr5 (95-164)||(16602701-16602769)
chr5 (118-167)||(19238791-19238840)
chr5 (83-166)||(25684071-25684154)
[»] chr4 (73 HSPs)
chr4 (20-164)||(27538915-27539059)
chr4 (22-164)||(30539569-30539711)
chr4 (20-165)||(34280491-34280636)
chr4 (20-164)||(51436075-51436220)
chr4 (20-155)||(52589080-52589215)
chr4 (22-164)||(48579174-48579315)
chr4 (20-164)||(41759922-41760067)
chr4 (20-164)||(30342825-30342968)
chr4 (20-166)||(14802710-14802856)
chr4 (23-164)||(3716325-3716466)
chr4 (20-164)||(28037685-28037830)
chr4 (20-165)||(37855120-37855265)
chr4 (20-151)||(46041714-46041845)
chr4 (20-165)||(55722475-55722620)
chr4 (20-166)||(52809207-52809352)
chr4 (20-164)||(53389108-53389253)
chr4 (20-164)||(37519226-37519370)
chr4 (20-164)||(37523442-37523586)
chr4 (46-165)||(43137653-43137772)
chr4 (20-165)||(36091058-36091202)
chr4 (22-162)||(38835854-38835992)
chr4 (22-165)||(29646623-29646766)
chr4 (21-164)||(38975277-38975419)
chr4 (20-165)||(39162067-39162212)
chr4 (21-165)||(9858243-9858387)
chr4 (21-165)||(48066268-48066412)
chr4 (22-160)||(36592298-36592437)
chr4 (20-167)||(46216034-46216181)
chr4 (21-167)||(31908440-31908586)
chr4 (20-165)||(56361575-56361718)
chr4 (22-105)||(33076245-33076328)
chr4 (50-165)||(47302028-47302145)
chr4 (20-161)||(47302399-47302540)
chr4 (20-165)||(1414364-1414506)
chr4 (22-70)||(52591898-52591946)
chr4 (22-166)||(43363325-43363470)
chr4 (31-164)||(50383602-50383736)
chr4 (95-164)||(18425455-18425524)
chr4 (22-160)||(46004588-46004726)
chr4 (22-70)||(30891399-30891447)
chr4 (84-172)||(31681329-31681417)
chr4 (21-172)||(32737452-32737603)
chr4 (22-164)||(33491425-33491568)
chr4 (83-165)||(52324292-52324374)
chr4 (20-137)||(53695659-53695776)
chr4 (22-165)||(352736-352880)
chr4 (81-164)||(13548727-13548810)
chr4 (82-167)||(48647345-48647431)
chr4 (82-164)||(53936836-53936919)
chr4 (22-137)||(423178-423293)
chr4 (83-165)||(6807319-6807401)
chr4 (83-165)||(19842437-19842519)
chr4 (83-164)||(52940480-52940561)
chr4 (31-165)||(50607683-50607819)
chr4 (34-69)||(9381119-9381154)
chr4 (83-166)||(18052264-18052347)
chr4 (165-200)||(28926028-28926063)
chr4 (83-166)||(30168425-30168508)
chr4 (83-162)||(37992007-37992086)
chr4 (83-161)||(38961289-38961367)
chr4 (82-151)||(42881352-42881422)
chr4 (95-164)||(17370614-17370682)
chr4 (31-68)||(23059040-23059077)
chr4 (84-167)||(23059095-23059179)
chr4 (31-68)||(29582062-29582099)
chr4 (83-167)||(36569645-36569729)
chr4 (83-164)||(39380724-39380805)
chr4 (95-164)||(48207078-48207146)
chr4 (31-68)||(56104673-56104710)
chr4 (84-167)||(1434127-1434211)
chr4 (22-70)||(5970963-5971011)
chr4 (23-55)||(27950519-27950551)
chr4 (82-162)||(32570370-32570450)
[»] chr1 (100 HSPs)
chr1 (20-166)||(31930960-31931106)
chr1 (20-165)||(45423608-45423753)
chr1 (21-164)||(50905581-50905724)
chr1 (22-164)||(39190821-39190963)
chr1 (20-164)||(922104-922248)
chr1 (20-164)||(5956789-5956933)
chr1 (20-167)||(38262396-38262543)
chr1 (20-167)||(41073267-41073413)
chr1 (23-155)||(51519791-51519921)
chr1 (21-167)||(46770995-46771141)
chr1 (20-165)||(35305150-35305295)
chr1 (24-161)||(51781370-51781507)
chr1 (20-164)||(37498744-37498887)
chr1 (20-166)||(52303011-52303157)
chr1 (23-165)||(16482575-16482716)
chr1 (20-164)||(39971531-39971675)
chr1 (23-162)||(51984936-51985075)
chr1 (22-164)||(8461791-8461932)
chr1 (20-151)||(29106626-29106760)
chr1 (38-165)||(28493809-28493936)
chr1 (20-155)||(23459818-23459955)
chr1 (47-164)||(27295058-27295175)
chr1 (20-162)||(11778898-11779040)
chr1 (31-161)||(26102746-26102876)
chr1 (22-162)||(2247069-2247209)
chr1 (20-160)||(52260817-52260957)
chr1 (78-164)||(18641888-18641974)
chr1 (21-136)||(50239497-50239612)
chr1 (20-166)||(9166871-9167017)
chr1 (20-164)||(632910-633054)
chr1 (20-111)||(43306582-43306671)
chr1 (20-100)||(45673379-45673459)
chr1 (20-155)||(6520247-6520382)
chr1 (20-162)||(26011204-26011346)
chr1 (21-166)||(28791631-28791776)
chr1 (20-133)||(35910193-35910306)
chr1 (21-165)||(23304406-23304550)
chr1 (20-164)||(48616710-48616853)
chr1 (78-166)||(23056763-23056851)
chr1 (78-132)||(44246318-44246372)
chr1 (20-162)||(51184044-51184186)
chr1 (20-164)||(51369329-51369461)
chr1 (85-174)||(34256443-34256532)
chr1 (20-161)||(27352850-27352991)
chr1 (85-165)||(33098982-33099062)
chr1 (20-161)||(33906322-33906463)
chr1 (22-165)||(35874202-35874346)
chr1 (20-137)||(36274979-36275096)
chr1 (20-164)||(7121957-7122100)
chr1 (22-165)||(51056196-51056339)
chr1 (82-164)||(42317149-42317231)
chr1 (21-134)||(47719236-47719348)
chr1 (20-107)||(10179135-10179222)
chr1 (84-164)||(44382342-44382423)
chr1 (83-164)||(44978869-44978950)
chr1 (31-164)||(6526700-6526835)
chr1 (31-165)||(44263645-44263781)
chr1 (31-164)||(477707-477841)
chr1 (82-167)||(21072773-21072857)
chr1 (82-166)||(32144992-32145077)
chr1 (22-166)||(38260800-38260945)
chr1 (83-164)||(31075935-31076017)
chr1 (84-165)||(46707671-46707753)
chr1 (23-164)||(12227121-12227265)
chr1 (82-167)||(14077326-14077411)
chr1 (22-165)||(24381315-24381460)
chr1 (83-164)||(26424166-26424247)
chr1 (21-70)||(31890340-31890389)
chr1 (82-154)||(50631916-50631989)
chr1 (22-112)||(52180287-52180377)
chr1 (37-130)||(2620680-2620773)
chr1 (21-53)||(18641979-18642011)
chr1 (85-137)||(29953926-29953978)
chr1 (82-137)||(17525464-17525519)
chr1 (82-164)||(26308526-26308609)
chr1 (23-70)||(33082084-33082131)
chr1 (23-70)||(42275600-42275647)
chr1 (23-164)||(43536877-43537019)
chr1 (90-165)||(46918384-46918459)
chr1 (82-113)||(49616150-49616181)
chr1 (82-164)||(51787792-51787875)
chr1 (95-165)||(5360540-5360609)
chr1 (83-164)||(9223181-9223262)
chr1 (95-165)||(33081987-33082056)
chr1 (84-166)||(45317934-45318016)
chr1 (21-67)||(45318033-45318079)
chr1 (82-167)||(48760122-48760208)
chr1 (20-70)||(51978119-51978169)
chr1 (83-167)||(25493495-25493579)
chr1 (120-161)||(26830255-26830296)
chr1 (31-68)||(28624574-28624611)
chr1 (82-162)||(30263906-30263987)
chr1 (24-53)||(32990007-32990036)
chr1 (129-170)||(35913003-35913044)
chr1 (83-167)||(46872366-46872450)
chr1 (83-166)||(7426986-7427069)
chr1 (83-165)||(17554142-17554225)
chr1 (82-166)||(33985909-33985993)
chr1 (82-165)||(38717753-38717837)
chr1 (82-114)||(45809494-45809526)
[»] scaffold0005 (1 HSPs)
scaffold0005 (20-166)||(36871-37017)
[»] scaffold0077 (1 HSPs)
scaffold0077 (20-137)||(48037-48154)
[»] scaffold0625 (1 HSPs)
scaffold0625 (21-164)||(6526-6669)
[»] scaffold0604 (1 HSPs)
scaffold0604 (20-162)||(2022-2164)
[»] scaffold0113 (1 HSPs)
scaffold0113 (20-154)||(29255-29389)
[»] scaffold0432 (1 HSPs)
scaffold0432 (31-164)||(3302-3436)
[»] scaffold0072 (1 HSPs)
scaffold0072 (81-165)||(47898-47982)
[»] scaffold0060 (1 HSPs)
scaffold0060 (83-166)||(45759-45843)
[»] scaffold0067 (1 HSPs)
scaffold0067 (23-70)||(41484-41531)


Alignment Details
Target: chr8 (Bit Score: 110; Significance: 1e-55; HSPs: 62)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 20 - 166
Target Start/End: Complemental strand, 29773589 - 29773443
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||| |||||||||||||||||||||||| ||    
T  29773589 cgtttttggtaaataagatttagttattataattataggtgatagaaaatatttttttcctacaaaaaataaatcatttaactattaatttaaggatttg 29773490  T
Q  120 gtgtaccaatacactcaagttgttgggtgtaccatataatttgccta 166  Q
    |||||||||||||||||| ||||||||||||||||| ||||||||||    
T  29773489 gtgtaccaatacactcaaattgttgggtgtaccatagaatttgccta 29773443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 20 - 166
Target Start/End: Original strand, 14498565 - 14498711
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||       ||||||||||||||||||||||||||||||||||||||| ||    
T  14498565 cgtttttggtaaataagatttagttattataattacaggtgatagaaaataattttttcctacaaaaaataactcatttaactattaatttaaggatttg 14498664  T
Q  120 gtgtaccaatacactcaagttgttgggtgtaccatataatttgccta 166  Q
    |||||||||||||||||| ||||||||||||||||| || |||||||    
T  14498665 gtgtaccaatacactcaaattgttgggtgtaccatagaacttgccta 14498711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 20 - 165
Target Start/End: Complemental strand, 38502328 - 38502183
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||| ||    
T  38502328 cgtttttggtaaataagatttagttattataattataggtgatagaaaataattttttcctacaaaaaataactcatttaactattaatttaaggatttg 38502229  T
Q  120 gtgtaccaatacactcaagttgttgggtgtaccatataatttgcct 165  Q
    ||||||||||||||| || ||||||||||||||||| || ||||||    
T  38502228 gtgtaccaatacacttaaattgttgggtgtaccatagaacttgcct 38502183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 102; E-Value: 7e-51
Query Start/End: Original strand, 20 - 166
Target Start/End: Complemental strand, 36002500 - 36002354
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||| ||    
T  36002500 cgtttttggtaaataagatttagttattataattataggtgatagaaaataattttttcctacaaaaaataactcatttaactattaatttaaggatttg 36002401  T
Q  120 gtgtaccaatacactcaagttgttgggtgtaccatataatttgccta 166  Q
    |||||| ||||||||||| ||||||| ||||||||| || |||||||    
T  36002400 gtgtactaatacactcaaattgttggatgtaccatagaacttgccta 36002354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 20 - 165
Target Start/End: Complemental strand, 23286709 - 23286564
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||| ||    
T  23286709 cgtttttgataaataagatttagttattataattataggtgatagaaaatatttttttcctacaaaaaataactcatttaactattaatttaaggatttg 23286610  T
Q  120 gtgtaccaatacactcaagttgttgggtgtaccatataatttgcct 165  Q
    |||||||||||||| ||| ||||| ||||||||||| |||||||||    
T  23286609 gtgtaccaatacacgcaaattgttaggtgtaccatagaatttgcct 23286564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 20 - 165
Target Start/End: Complemental strand, 37511232 - 37511087
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||       ||||||||||||||||||||||||||||||||||| ||| ||    
T  37511232 cgtttttggtaaataagatttagttattataattataggtgatggaaaatatttttttcctacaaaaaataactcatttaactattaatttaaagatttg 37511133  T
Q  120 gtgtaccaatacactcaagttgttgggtgtaccatataatttgcct 165  Q
    |||||||||||||||||| ||||||||||||||||  |||||||||    
T  37511132 gtgtaccaatacactcaaattgttgggtgtaccatcgaatttgcct 37511087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 21 - 164
Target Start/End: Complemental strand, 28090334 - 28090192
Alignment:
Q  21 gtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtgg 120  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||       ||||||||||||||||||||||||||||||||||||||| |||    
T  28090334 gtttttggtaaataagatttagttattataattataggtgatggaaaatatttttt-cctacaaaaaataactcatttaactattaatttaaggatttgg 28090236  T
Q  121 tgtaccaatacactcaagttgttgggtgtaccatataatttgcc 164  Q
    |||||||||| |||||| || |||||||||||||| ||||||||    
T  28090235 tgtaccaatatactcaaattattgggtgtaccatagaatttgcc 28090192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 20 - 164
Target Start/End: Complemental strand, 34332256 - 34332112
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||| || ||    
T  34332256 cgtttttggtaaaaaagatttagttattataattataggtgatagaaaatatttttttcctacaaaaaataactcatttaactattaatttaagaatttg 34332157  T
Q  120 gtgtaccaatacactcaagttgttgggtgtaccatataatttgcc 164  Q
    |||||||||| |||| || || |||||||||||||| ||||||||    
T  34332156 gtgtaccaatgcacttaaattattgggtgtaccatagaatttgcc 34332112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 20 - 164
Target Start/End: Complemental strand, 37161648 - 37161504
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||       |||| |||||||||||||||||||||||||||||||||| ||    
T  37161648 cgtttttggtaaataagatttagttattataattataggtgatagaaaataattttttcctataaaaaataactcatttaactattaatttaaggatttg 37161549  T
Q  120 gtgtaccaatacactcaagttgttgggtgtaccatataatttgcc 164  Q
     |||||| |||||||||| |||||||||||| |||| || |||||    
T  37161548 atgtacctatacactcaaattgttgggtgtagcatagaacttgcc 37161504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 23 - 166
Target Start/End: Original strand, 15726155 - 15726298
Alignment:
Q  23 ttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtggtg 122  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||       |||||||||||||||| |||||||||||||||||||||| |||||    
T  15726155 ttttggtgaataagatttagttattataatcataggtgatagaaaataattttttcctacaaaaaataacttatttaactattaatttaaggatttggtg 15726254  T
Q  123 taccaatacactcaagttgttgggtgtaccatataatttgccta 166  Q
    ||||||||||||||| || |||| ||||||||| ||||||||||    
T  15726255 taccaatacactcaaattattggatgtaccatagaatttgccta 15726298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 20 - 170
Target Start/End: Original strand, 29229440 - 29229589
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| ||       |||||||||||||||||| ||||||||||||||||| || ||    
T  29229440 cgtttttggtaaataagatttagttattataattataggcgatagaaa-taattttttcctacaaaaaataactcacttaactattaatttaagaatttg 29229538  T
Q  120 gtgtaccaatacactcaagttgttgggtgtaccatataatttgcctatcaa 170  Q
    |||||||||||||||||| | ||||||||||||||| ||||||||| ||||    
T  29229539 gtgtaccaatacactcaaatggttgggtgtaccatagaatttgcctttcaa 29229589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 20 - 162
Target Start/End: Complemental strand, 44935043 - 44934901
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    |||||||| |||||||||||||||||||||||||||||||||| |||||||       ||| ||||||||||||||||||||||||||||||||||| ||    
T  44935043 cgtttttgataaataagatttagttattataattataggtgatggaaaatatttttttcctgcaaaaaataactcatttaactattaatttaaggatttg 44934944  T
Q  120 gtgtaccaatacactcaagttgttgggtgtaccatataatttg 162  Q
     |||||||||||| |||| ||||||||||||||||| ||||||    
T  44934943 atgtaccaatacattcaaattgttgggtgtaccatagaatttg 44934901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 20 - 149
Target Start/End: Complemental strand, 10280704 - 10280575
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    |||||||||||||||||||||||||| ||||||||||||||||| ||||||       ||||||||||||||||||||||||||||||||||| ||| ||    
T  10280704 cgtttttggtaaataagatttagttactataattataggtgatataaaataattttttcctacaaaaaataactcatttaactattaatttaaagatttg 10280605  T
Q  120 gtgtaccaatacactcaagttgttgggtgt 149  Q
    |||||||||||||||||| |||||||||||    
T  10280604 gtgtaccaatacactcaaattgttgggtgt 10280575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 20 - 164
Target Start/End: Complemental strand, 29459778 - 29459633
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnn-cctacaaaaaataactcatttaactattaatttaaggatgt 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||| || |    
T  29459778 cgtttttggtaaataagatttagttattataattataggtgatagaaaatattttttttcctacaaaaaataactcatttaactattaatttaagaattt 29459679  T
Q  119 ggtgtaccaatacactcaagttgttgggtgtaccatataatttgcc 164  Q
    | |  | |||||||||||| ||||||||||||||||| ||||||||    
T  29459678 gatagatcaatacactcaaattgttgggtgtaccataaaatttgcc 29459633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 22 - 162
Target Start/End: Original strand, 12163207 - 12163347
Alignment:
Q  22 tttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtggt 121  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||       |||||||||||||||||||||||||||||||||||| || || |    
T  12163207 tttttggtaaataagatttagttattataattataggtgatagaaattaattttttcctacaaaaaataactcatttaactattaatttaagaatttgat 12163306  T
Q  122 gtaccaatacactcaagttgttgggtgtaccatataatttg 162  Q
    |||||||| || |||| | |||||||| |||||| ||||||    
T  12163307 gtaccaatgcattcaaatggttgggtgcaccatagaatttg 12163347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 22 - 162
Target Start/End: Original strand, 12407635 - 12407775
Alignment:
Q  22 tttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtggt 121  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||       |||||||||||||||||||||||||||||||||||| || || |    
T  12407635 tttttggtaaataagatttagttattataattataggtgatagaaattaattttttcctacaaaaaataactcatttaactattaatttaagaatttgat 12407734  T
Q  122 gtaccaatacactcaagttgttgggtgtaccatataatttg 162  Q
    |||||||| || |||| | |||||||| |||||| ||||||    
T  12407735 gtaccaatgcattcaaatggttgggtgcaccatagaatttg 12407775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 39 - 167
Target Start/End: Complemental strand, 946100 - 945973
Alignment:
Q  39 ttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtggtgtaccaatacactcaag 138  Q
    ||||||||||||||||||||||||||||| ||       ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||     
T  946100 ttagttattataattataggtgatagaaa-taattttttcctacaaaaaataactcatttaactattaatttaaagatttggtgtaccaatacactcaaa 946002  T
Q  139 ttgttgggtgtaccatataatttgcctat 167  Q
    | ||||| |||||| || |||||||||||    
T  946001 tggttggatgtaccgtagaatttgcctat 945973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 20 - 164
Target Start/End: Complemental strand, 2273154 - 2273010
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    |||||||| ||||||||||||| |||||||||||||||||||||||||| |        ||  |||||||||| ||||||||||||||||||| ||| ||    
T  2273154 cgtttttgataaataagatttaattattataattataggtgatagaaaacaatttttctcttaaaaaaataacacatttaactattaatttaatgatttg 2273055  T
Q  120 gtgtaccaatacactcaagttgttgggtgtaccatataatttgcc 164  Q
    |||||||||||||||||  |  |||||||||||||| ||||||||    
T  2273054 gtgtaccaatacactcatatctttgggtgtaccatagaatttgcc 2273010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 21 - 165
Target Start/End: Complemental strand, 17642217 - 17642073
Alignment:
Q  21 gtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtgg 120  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||||| |        || ||||||||||| ||||||||||||||||||| ||| |||    
T  17642217 gtttttgataaataagatttaattattataattataggtgatagaaaacaatttttctcttcaaaaaataacacatttaactattaatttaatgatttgg 17642118  T
Q  121 tgtaccaatacactcaagttgttgggtgtaccatataatttgcct 165  Q
    ||||||||||||||||  |  |||| ||||||||| |||||||||    
T  17642117 tgtaccaatacactcatatctttggatgtaccatagaatttgcct 17642073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 20 - 165
Target Start/End: Complemental strand, 23274767 - 23274621
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaa-atannnnnnncctacaaaaaataactcatttaactattaatttaaggatgt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  |         ||| |||||||||||| ||||||||||||||||| ||| |    
T  23274767 cgtttttggtaaataagatttagttattataattataggtgatagaaattttttttttttctaaaaaaaataactcctttaactattaatttaaagattt 23274668  T
Q  119 ggtgtaccaatacactcaagttgttgggtgtaccatataatttgcct 165  Q
    |||| |||||||||||||| |||| | ||||||| || |||||||||    
T  23274667 ggtgcaccaatacactcaaattgtagagtgtaccgtagaatttgcct 23274621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 20 - 169
Target Start/End: Complemental strand, 43049680 - 43049532
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||||| |        || ||||||||||| |||||||| |||||||||| ||| ||    
T  43049680 cgtttttggtaaataatatttaattattataattataggtgatagaaaacaatttttctcttcaaaaaataacacatttaac-attaatttaatgatttg 43049582  T
Q  120 gtgtaccaatacactcaagttgttgggtgtaccatataatttgcctatca 169  Q
    ||||||||||||| |||| || |||| ||||||||| |||||||| ||||    
T  43049581 gtgtaccaatacattcaaatttttggatgtaccatagaatttgccaatca 43049532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 20 - 164
Target Start/End: Complemental strand, 529411 - 529267
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| |        || ||||||||||| ||||||||||||||||||  ||  ||    
T  529411 cgtttttggtaaataagatttaattattataattataggtgatagaaaacaatttttctcttcaaaaaataacacatttaactattaatttattgacttg 529312  T
Q  120 gtgtaccaatacactcaagttgttgggtgtaccatataatttgcc 164  Q
    |||||||||||||| ||| || ||  |||||||||| ||||||||    
T  529311 gtgtaccaatacacccaaattttttagtgtaccatagaatttgcc 529267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 22 - 166
Target Start/End: Original strand, 42444482 - 42444626
Alignment:
Q  22 tttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtggt 121  Q
    |||||| ||||||||||||| |||||||||||||| |||||||||||||        || ||||||||| | ||||||||||||||||||| ||| ||||    
T  42444482 tttttgataaataagatttaattattataattataagtgatagaaaataatttttctcttcaaaaaatagcacatttaactattaatttaatgatttggt 42444581  T
Q  122 gtaccaatacactcaagttgttgggtgtaccatataatttgccta 166  Q
    |||||||||||||||| |  || | ||||||||| ||||||||||    
T  42444582 gtaccaatacactcaaatctttagatgtaccatagaatttgccta 42444626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 21 - 164
Target Start/End: Complemental strand, 37465827 - 37465684
Alignment:
Q  21 gtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtgg 120  Q
    ||||||| ||||||||||||| ||||||||||||||||||||| ||||||        || |||||||||||  |||||||||||||||||  ||| |||    
T  37465827 gtttttgataaataagatttaattattataattataggtgataaaaaataatttttctcttcaaaaaataacatatttaactattaatttattgatttgg 37465728  T
Q  121 tgtaccaatacactcaagttgttgggtgtaccatataatttgcc 164  Q
    |||||||||||||| || || |||| ||||||||| ||||||||    
T  37465727 tgtaccaatacacttaaatttttggatgtaccatagaatttgcc 37465684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 20 - 165
Target Start/End: Complemental strand, 16323703 - 16323558
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    |||||||||||||||||||||| |||| | ||||||||||||||||||| |        || |||| |||||| ||||||||||||||||||  ||| ||    
T  16323703 cgtttttggtaaataagatttaattatcacaattataggtgatagaaaacaatttttctcttcaaataataacacatttaactattaatttattgatttg 16323604  T
Q  120 gtgtaccaatacactcaagttgttgggtgtaccatataatttgcct 165  Q
    |||||||||||||||||| |  ||||||||| |||| |||||||||    
T  16323603 gtgtaccaatacactcaaatctttgggtgtatcatagaatttgcct 16323558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 20 - 164
Target Start/End: Complemental strand, 4475189 - 4475046
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    |||||||| ||||||||||||| ||||||||||||||| ||||||||||||         | ||||||||||   ||||||||||||||||   ||| ||    
T  4475189 cgtttttgataaataagatttaattattataattatagatgatagaaaatatttttatttttcaaaaaataatagatttaactattaatttgttgatttg 4475090  T
Q  120 gtgtaccaatacactcaagttgttgggtgtaccatataatttgcc 164  Q
    |||||||||||||||||| || ||||||| |||||| ||||||||    
T  4475089 gtgtaccaatacactcaaatttttgggtg-accatagaatttgcc 4475046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 20 - 164
Target Start/End: Original strand, 26439785 - 26439930
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    |||||||||| ||||||||||| |||||||||||||||||||| ||||| |        || ||||||||||| |||||||||||||||||   |||  |    
T  26439785 cgtttttggttaataagatttaattattataattataggtgatggaaaacaatttttctcttcaaaaaataacacatttaactattaatttgttgattgg 26439884  T
Q  120 gtgtaccaatacactc-aagttgttgggtgtaccatataatttgcc 164  Q
    |||||||||| ||||| || || ||| |||||||||| ||||||||    
T  26439885 gtgtaccaatgcactcaaattttttgagtgtaccatagaatttgcc 26439930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 20 - 165
Target Start/End: Original strand, 39347392 - 39347537
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    |||||||||||||| | ||||| ||||||||||||||||||||| ||||||         |  |||||||||| ||||||||||||||||||  ||| |     
T  39347392 cgtttttggtaaatgatatttaattattataattataggtgatataaaatattttttcttttaaaaaaataacacatttaactattaatttattgattta 39347491  T
Q  120 gtgtaccaatacactcaagttgttgggtgtaccatataatttgcct 165  Q
     ||||||||||||||||| || || | ||||||||| |||||||||    
T  39347492 atgtaccaatacactcaaattttttgatgtaccataaaatttgcct 39347537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 29 - 165
Target Start/End: Original strand, 6800044 - 6800179
Alignment:
Q  29 taaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtggtgtaccaa 128  Q
    ||||||||||||| ||||||||||||||||| |||||||| |        ||  |||||| ||| |||||||||||||||| || ||| |||||||||||    
T  6800044 taaataagatttaattattataattataggtaatagaaaacaatttttctcttaaaaaaa-aacacatttaactattaattcaatgatttggtgtaccaa 6800142  T
Q  129 tacactcaagttgttgggtgtaccatataatttgcct 165  Q
    ||||||||| |  ||| |||||||||| |||||||||    
T  6800143 tacactcaaatctttgagtgtaccataaaatttgcct 6800179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 162
Target Start/End: Complemental strand, 2731933 - 2731791
Alignment:
Q  22 tttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactatt-aatttaaggatgtgg 120  Q
    |||||||||||||||||||| ||||| ||||||||| ||||||||||||        || ||||||||||| | |||||||||| ||||||||| | |||    
T  2731933 tttttggtaaataagatttaattattgtaattatagatgatagaaaataatttttctcttcaaaaaataacacttttaactattaaatttaagggtttgg 2731834  T
Q  121 tgtaccaatacactcaagt-tgttgggtgtaccatataatttg 162  Q
    |||||   |||||| || | |||||||||||||||| ||||||    
T  2731833 tgtactggtacacttaaatatgttgggtgtaccataaaatttg 2731791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 20 - 162
Target Start/End: Original strand, 36886424 - 36886566
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| |         | ||||| |||||  |||||| |||||||||||  || ||    
T  36886424 cgtttttggtaaataagatttaattattataattataggtgatagaaaacaatttttcttttcaaaatataacatatttaattattaatttaataatttg 36886523  T
Q  120 gtgtaccaatacactcaagttgttgggtgtaccatataatttg 162  Q
    ||||||| ||| |||||| || || | ||||||||| ||||||    
T  36886524 gtgtaccgatatactcaaatttttagatgtaccataaaatttg 36886566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 20 - 162
Target Start/End: Complemental strand, 43921269 - 43921127
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    |||||||  ||||||||||||| ||||||||||||||||||||||||||||        ||  |||||||||   |||||||||||| || || ||| ||    
T  43921269 cgttttttataaataagatttaattattataattataggtgatagaaaataatttttttctttaaaaaataatatatttaactattagttcaatgatttg 43921170  T
Q  120 gtgtaccaatacactcaagttgttgggtgtaccatataatttg 162  Q
    |||||||||||||||||| |  || ||| ||||||| ||||||    
T  43921169 gtgtaccaatacactcaaatctttaggtataccataaaatttg 43921127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 82 - 166
Target Start/End: Original strand, 19718675 - 19718759
Alignment:
Q  82 caaaaaataactcatttaactattaatttaaggatgtggtgtaccaatacactcaagttgttgggtgtaccatataatttgccta 166  Q
    ||||| ||||| ||||||| ||||||||||| ||| |||||||| ||||||||||| || |||| ||||||||| ||||||||||    
T  19718675 caaaatataacacatttaattattaatttaatgatttggtgtactaatacactcaaatttttggatgtaccatagaatttgccta 19718759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 82 - 164
Target Start/End: Original strand, 43485365 - 43485447
Alignment:
Q  82 caaaaaataactcatttaactattaatttaaggatgtggtgtaccaatacactcaagttgttgggtgtaccatataatttgcc 164  Q
    ||||||||||| ||||||||||||||||||  ||| || |||||||||||||||||  | ||| |||||||||| ||||||||    
T  43485365 caaaaaataacacatttaactattaatttattgatttgatgtaccaatacactcaaaattttgagtgtaccataaaatttgcc 43485447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 31 - 166
Target Start/End: Original strand, 29454481 - 29454618
Alignment:
Q  31 aataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaa-aataactcatttaactattaatttaaggatgtggtgtaccaat 129  Q
    ||||||||||||||||||||||||||  ||||| ||||||        || ||||| ||||||| |||||||||||||||||| ||   ||||||||  |    
T  29454481 aataagatttagttattataattataaatgataaaaaataatatttttcttcaaaaaaataacttatttaactattaatttaaagagtgggtgtaccggt 29454580  T
Q  130 acactcaagt-tgttgggtgtaccatataatttgccta 166  Q
    |||||||| | | |||||||||||||| ||||||||||    
T  29454581 acactcaaatatattgggtgtaccatagaatttgccta 29454618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 83 - 165
Target Start/End: Complemental strand, 27970093 - 27970011
Alignment:
Q  83 aaaaaataactcatttaactattaatttaaggatgtggtgtaccaatacactcaagttgttgggtgtaccatataatttgcct 165  Q
    |||||| ||||| ||||||||||||| |||  || ||||| |||  ||||||||| ||||||||||||||||| |||||||||    
T  27970093 aaaaaacaactcgtttaactattaatataataatttggtgcaccggtacactcaaattgttgggtgtaccatagaatttgcct 27970011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 82 - 162
Target Start/End: Complemental strand, 1043141 - 1043060
Alignment:
Q  82 caaaaaataactcatttaactattaatttaaggatgtggtgtaccaatacactcaagt-tgttgggtgtaccatataatttg 162  Q
    |||||||||||| |||||||||||||||||| ||   |||||||| |||||||||| | | |||||||||||||| ||||||    
T  1043141 caaaaaataacttatttaactattaatttaaagagtgggtgtaccgatacactcaaatatattgggtgtaccatagaatttg 1043060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 83 - 164
Target Start/End: Original strand, 34047742 - 34047823
Alignment:
Q  83 aaaaaataactcatttaactattaatttaaggatgtggtgtaccaatacactcaagttgttgggtgtaccatataatttgcc 164  Q
    |||||| ||||| |||||  ||||||||||  || |||||||||  ||||||||| ||||||||||||||||| ||||||||    
T  34047742 aaaaaacaactcgtttaatcattaatttaataatttggtgtaccggtacactcaaattgttgggtgtaccatagaatttgcc 34047823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 95 - 167
Target Start/End: Original strand, 17096619 - 17096690
Alignment:
Q  95 atttaactattaatttaaggatgtggtgtaccaatacactcaagttgttgggtgtaccatataatttgcctat 167  Q
    |||||| ||||||||||| | | ||||||||| ||||||||||  |||||||||||||||| |||||||||||    
T  17096619 atttaattattaatttaatgtt-tggtgtaccgatacactcaaaatgttgggtgtaccatagaatttgcctat 17096690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 82 - 137
Target Start/End: Complemental strand, 17792286 - 17792231
Alignment:
Q  82 caaaaaataactcatttaactattaatttaaggatgtggtgtaccaatacactcaa 137  Q
    |||||| |||||||||||||||| ||||||||| | |||||||||| |||||||||    
T  17792286 caaaaagtaactcatttaactataaatttaagggtttggtgtaccagtacactcaa 17792231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 31 - 165
Target Start/End: Original strand, 6631178 - 6631313
Alignment:
Q  31 aataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtggtgtaccaata 130  Q
    ||||||||||||||||||||||||||  ||||| |||| |        || ||||||| |||| |||||||||||||||||| ||   ||| ||||  ||    
T  6631178 aataagatttagttattataattataaatgataaaaaaaaatatttttcttcaaaaaacaactaatttaactattaatttaaagaatgggtataccggta 6631277  T
Q  131 cactcaagt-tgttgggtgtaccatataatttgcct 165  Q
    ||||||| | | |||||||||||||| |||||||||    
T  6631278 cactcaaatatattgggtgtaccatagaatttgcct 6631313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 95 - 165
Target Start/End: Complemental strand, 40154557 - 40154488
Alignment:
Q  95 atttaactattaatttaaggatgtggtgtaccaatacactcaagttgttgggtgtaccatataatttgcct 165  Q
    |||||| ||||||||||| | | ||||||||| ||||||||||  |||||||||||||||| |||||||||    
T  40154557 atttaattattaatttaatgtt-tggtgtaccgatacactcaaaatgttgggtgtaccataaaatttgcct 40154488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 83 - 165
Target Start/End: Original strand, 42165229 - 42165311
Alignment:
Q  83 aaaaaataactcatttaactattaatttaaggatgtggtgtaccaatacactcaagttgttgggtgtaccatataatttgcct 165  Q
    |||||||||||| ||||| |||||||||||  || || | ||||  |||| |||| ||||||| |||||||||||||||||||    
T  42165229 aaaaaataactcgtttaattattaatttaataatttgatataccggtacattcaaattgttggatgtaccatataatttgcct 42165311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 166
Target Start/End: Original strand, 4214758 - 4214904
Alignment:
Q  22 tttttggtaaataagatttagttattataattataggtgatagaaaa-tannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtgg 120  Q
    |||||| | ||||||||||||||||||||||||||  ||||| |||| ||        || |||||||||| | |||||||||||||||||| ||   ||    
T  4214758 tttttgatgaataagatttagttattataattataaatgataaaaaaataatatttttcttcaaaaaataatttatttaactattaatttaaagagtggg 4214857  T
Q  121 tgtaccaatacactcaagt-tgttgggtgtaccatataatttgccta 166  Q
    | ||||  ||||||||| | | |||||||||||||| ||||||||||    
T  4214858 tataccggtacactcaaatatattgggtgtaccatagaatttgccta 4214904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 167
Target Start/End: Original strand, 29265920 - 29266005
Alignment:
Q  83 aaaaaataactcatttaactattaatttaaggatgtggtgtaccaatacactcaagt-tgttgggtgtaccatataatttgcctat 167  Q
    |||||||||| ||||||||||||||||||| ||   ||| |||  |||||||||| | | |||||||||||||||||||| |||||    
T  29265920 aaaaaataacacatttaactattaatttaaagagtgggtatactgatacactcaaatatattgggtgtaccatataatttacctat 29266005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 112
Target Start/End: Original strand, 45452650 - 45452740
Alignment:
Q  22 tttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaa 112  Q
    |||||| | ||||||||||||||||||||||||||  ||||| ||||||        || |||||||||||| ||||||||| ||||||||    
T  45452650 tttttgatgaataagatttagttattataattataaatgataaaaaataatatttttcttcaaaaaataacttatttaactactaatttaa 45452740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 151
Target Start/End: Complemental strand, 27171995 - 27171927
Alignment:
Q  84 aaaaataactcatttaactattaatttaaggatgtggtgtaccaatacactcaagt-tgttgggtgtac 151  Q
    ||||||||||||||||||||| ||||||| | | |||||||||  ||||||||| | ||||||||||||    
T  27171995 aaaaataactcatttaactataaatttaacggtttggtgtaccggtacactcaaatatgttgggtgtac 27171927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 39029541 - 39029497
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatag 64  Q
    |||||||| ||||||| ||||| ||||||||||||||||||||||    
T  39029541 cgtttttgataaataaaatttatttattataattataggtgatag 39029497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 17069494 - 17069544
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaata 70  Q
    |||||||||||||||||||||| ||||||||||| |   ||||||||||||    
T  17069494 cgtttttggtaaataagatttaattattataattgtcaatgatagaaaata 17069544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 17578779 - 17578729
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaata 70  Q
    |||||||||||||||||||||| ||||||||||| |   ||||||||||||    
T  17578779 cgtttttggtaaataagatttaattattataattgtcaatgatagaaaata 17578729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 165
Target Start/End: Complemental strand, 43331812 - 43331743
Alignment:
Q  95 atttaactattaatttaaggatgtggtgtaccaatacactcaagttgttgggtgtaccatataatttgcct 165  Q
    |||||| ||||||||||| | | |||||||||  |||||||||  |||||||||||||||| |||||||||    
T  43331812 atttaattattaatttaaagtt-tggtgtaccggtacactcaaaatgttgggtgtaccatagaatttgcct 43331743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 165
Target Start/End: Complemental strand, 44309634 - 44309565
Alignment:
Q  95 atttaactattaatttaaggatgtggtgtaccaatacactcaagttgttgggtgtaccatataatttgcct 165  Q
    |||||| ||||||||||| | | |||||||||  |||||||||  |||||||||||||||| |||||||||    
T  44309634 atttaattattaatttaaagtt-tggtgtaccggtacactcaaaatgttgggtgtaccatagaatttgcct 44309565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 83 - 164
Target Start/End: Original strand, 5215646 - 5215727
Alignment:
Q  83 aaaaaataactcatttaactattaatttaaggatgtggtgtaccaatacactcaagttgttgggtgtaccatataatttgcc 164  Q
    |||||| |||| |||||| ||||||||||| | | | ||||||| ||||||||||  | ||| |||||||||| ||||||||    
T  5215646 aaaaaacaactaatttaattattaatttaatgtttttgtgtaccgatacactcaaaatattgagtgtaccataaaatttgcc 5215727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 118 - 167
Target Start/End: Complemental strand, 12801153 - 12801104
Alignment:
Q  118 tggtgtaccaatacactcaagttgttgggtgtaccatataatttgcctat 167  Q
    |||||||||  ||||||||| || |||||||||||||| |||||||||||    
T  12801153 tggtgtaccggtacactcaaatttttgggtgtaccatagaatttgcctat 12801104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 84 - 165
Target Start/End: Original strand, 13483222 - 13483303
Alignment:
Q  84 aaaaataactcatttaactattaatttaaggatgtggtgtaccaatacactcaagttgttgggtgtaccatataatttgcct 165  Q
    ||||||||| |||||| |||||||||||  ||| || ||| ||||||||| |||  | ||| |||||||||| |||||||||    
T  13483222 aaaaataacacatttatctattaatttattgatttgatgtcccaatacacccaaaattttgagtgtaccatagaatttgcct 13483303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 90 - 162
Target Start/End: Original strand, 26988719 - 26988792
Alignment:
Q  90 aactcatttaactattaatttaaggatgtggtgtaccaatacactcaagt-tgttgggtgtaccatataatttg 162  Q
    |||| |||||||||||||||||| ||    ||||||| |||||||||| | | |||||||||||||||||||||    
T  26988719 aacttatttaactattaatttaaagaatgagtgtaccgatacactcaaatatattgggtgtaccatataatttg 26988792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 83 - 164
Target Start/End: Original strand, 32071569 - 32071650
Alignment:
Q  83 aaaaaataactcatttaactattaatttaaggatgtggtgtaccaatacactcaagttgttgggtgtaccatataatttgcc 164  Q
    |||||| ||||| | ||| ||||||||||| ||| | ||||||| || ||||||| || || ||||||||||| ||||||||    
T  32071569 aaaaaacaactcgtataattattaatttaacgatttcgtgtaccgattcactcaaatttttcggtgtaccataaaatttgcc 32071650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 83 - 162
Target Start/End: Complemental strand, 34633945 - 34633865
Alignment:
Q  83 aaaaaataactcatttaactattaatttaaggatgtg-gtgtaccaatacactcaagt-tgttgggtgtaccatataatttg 162  Q
    |||||| ||||||||||||||||||||||| || ||| ||||||| |||||||||| | | ||||||||| |||| ||||||    
T  34633945 aaaaaacaactcatttaactattaatttaaaga-gtgagtgtaccgatacactcaaatatattgggtgtatcatagaatttg 34633865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 31 - 68
Target Start/End: Original strand, 38329722 - 38329759
Alignment:
Q  31 aataagatttagttattataattataggtgatagaaaa 68  Q
    |||||||||||||||||||||||||| |||||| ||||    
T  38329722 aataagatttagttattataattataagtgataaaaaa 38329759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 112
Target Start/End: Original strand, 40776882 - 40776972
Alignment:
Q  22 tttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaa 112  Q
    |||||| | ||||||||||||||||||||||||||  ||||| ||||||        |  ||||||| |||| ||||||||||||||||||    
T  40776882 tttttgatgaataagatttagttattataattataaatgataaaaaataatatttttcctcaaaaaacaacttatttaactattaatttaa 40776972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 164
Target Start/End: Original strand, 464141 - 464221
Alignment:
Q  84 aaaaataactcatttaactattaatttaaggatgtggtgtaccaatacactcaagttgttgggtgtaccatataatttgcc 164  Q
    ||||| |||||||||||  |||||||||  ||||| |||||||  ||||||||| || ||   ||||||||||||||||||    
T  464141 aaaaacaactcatttaatgattaatttactgatgtagtgtaccggtacactcaaatttttaaatgtaccatataatttgcc 464221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 167
Target Start/End: Original strand, 12633231 - 12633315
Alignment:
Q  83 aaaaaataactcatttaactattaatttaaggatgtggtgtaccaatacactcaagttgttgggtgtaccatataatttgcctat 167  Q
    |||||| |||| | |||| ||||||||||| | | |||||||    |||||||||  |||||||||||||||| |||||||||||    
T  12633231 aaaaaacaactaacttaattattaatttaatgctttggtgtaatggtacactcaaaatgttgggtgtaccatagaatttgcctat 12633315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 110; Significance: 1e-55; HSPs: 80)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 20 - 166
Target Start/End: Original strand, 29786859 - 29787005
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||| || ||    
T  29786859 cgtttttggtaaataagatttagttattataattataggtgatagaaaatatttttttcctacaaaaaataactcatttaactattaatttaagaatttg 29786958  T
Q  120 gtgtaccaatacactcaagttgttgggtgtaccatataatttgccta 166  Q
    |||||||||||||||||| ||||||||||||||||| ||||||||||    
T  29786959 gtgtaccaatacactcaaattgttgggtgtaccatagaatttgccta 29787005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 20 - 166
Target Start/End: Complemental strand, 42067723 - 42067577
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||       ||||||||||||||||||||||||||||||||||||||| ||    
T  42067723 cgtttttggtaaataagatttagttattataattataggtgatggaaaatatttttttcctacaaaaaataactcatttaactattaatttaaggatttg 42067624  T
Q  120 gtgtaccaatacactcaagttgttgggtgtaccatataatttgccta 166  Q
    |||||||||||||||||| ||||||||||||||||| ||||||||||    
T  42067623 gtgtaccaatacactcaaattgttgggtgtaccatagaatttgccta 42067577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 20 - 166
Target Start/End: Original strand, 35171455 - 35171601
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||| | ||    
T  35171455 cgtttttggtaaataagatttagttattataattataggtgatagaaaataattttttcctacaaaaaataactcatttaactattaatttaagggtttg 35171554  T
Q  120 gtgtaccaatacactcaagttgttgggtgtaccatataatttgccta 166  Q
    |||||||||||||||||| ||||||||||||||||| || |||||||    
T  35171555 gtgtaccaatacactcaaattgttgggtgtaccatagaacttgccta 35171601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 20 - 165
Target Start/End: Original strand, 876484 - 876629
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||       ||| ||||||||||||||||||||||||||||||||||| ||    
T  876484 cgtttttggcaaataagatttagttattataattataggtgatagaaaataattttttccttcaaaaaataactcatttaactattaatttaaggatttg 876583  T
Q  120 gtgtaccaatacactcaagttgttgggtgtaccatataatttgcct 165  Q
    ||||||||||||||| || |||||||||||||||||||||||||||    
T  876584 gtgtaccaatacacttaaattgttgggtgtaccatataatttgcct 876629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 20 - 164
Target Start/End: Original strand, 44670520 - 44670664
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||| |     
T  44670520 cgtttttggtaaataagatttagttattataattataggtgatagaaaatatttttttcctacaaaaaataactcatttaactattaatttaaggatttt 44670619  T
Q  120 gtgtaccaatacactcaagttgttgggtgtaccatataatttgcc 164  Q
    |||||||||||||||||| |||||||||||||| || ||||||||    
T  44670620 gtgtaccaatacactcaaattgttgggtgtaccttagaatttgcc 44670664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 102; E-Value: 7e-51
Query Start/End: Original strand, 20 - 166
Target Start/End: Complemental strand, 11140390 - 11140245
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||       | ||||||||||||||||||||||||||||||||||||| ||    
T  11140390 cgtttttggtaaataagatttagttattataattataggtgatagaaaatatttttttc-tacaaaaaataactcatttaactattaatttaaggatttg 11140292  T
Q  120 gtgtaccaatacactcaagttgttgggtgtaccatataatttgccta 166  Q
    |||||||||||||||||| || |||||||||||||| ||||||||||    
T  11140291 gtgtaccaatacactcaaattattgggtgtaccatagaatttgccta 11140245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 20 - 161
Target Start/End: Original strand, 29347522 - 29347663
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||| ||| ||    
T  29347522 cgtttttggtagataagatttagttattataattataggtgatagaaaataattttttcctacaaaaaataactcatttaactattaatttaaagatttg 29347621  T
Q  120 gtgtaccaatacactcaagttgttgggtgtaccatataattt 161  Q
    |||||||||||||||||| ||||||||||||||||| |||||    
T  29347622 gtgtaccaatacactcaaattgttgggtgtaccatagaattt 29347663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 23 - 164
Target Start/End: Original strand, 38785347 - 38785488
Alignment:
Q  23 ttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtggtg 122  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||       ||||||||||||||||||||||||||||||||||||||| |||||    
T  38785347 ttttggtgaataagatttagttattataatcataggtgatagaaaataattttttcctacaaaaaataactcatttaactattaatttaaggatttggtg 38785446  T
Q  123 taccaatacactcaagttgttgggtgtaccatataatttgcc 164  Q
    ||||||||||||||| || |||||||||||||||||||||||    
T  38785447 taccaatacactcaaattattgggtgtaccatataatttgcc 38785488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 22 - 165
Target Start/End: Complemental strand, 40650209 - 40650066
Alignment:
Q  22 tttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtggt 121  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||| ||||    
T  40650209 tttttggtaaataagatttagttattataattataggtgatagaaaataattttttcctacaaaaaataactcatttaactattaatttaaggatttggt 40650110  T
Q  122 gtaccaatacactcaagttgttgggtgtaccatataatttgcct 165  Q
    |||||||||||||||| ||||| | ||||||||| || ||||||    
T  40650109 gtaccaatacactcaaattgttagttgtaccatagaacttgcct 40650066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 20 - 164
Target Start/End: Original strand, 42848468 - 42848614
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||| ||    
T  42848468 cgtttttggtaaataagatttagttattataattataggtgatagaaaataattttttcctacaaaaaataactcatttaactattaatttaaggatttg 42848567  T
Q  120 gtgt--accaatacactcaagttgttgggtgtaccatataatttgcc 164  Q
    ||||  |||||||||||||| ||||||||||||||||| || |||||    
T  42848568 gtgtgcaccaatacactcaaattgttgggtgtaccatagaacttgcc 42848614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 23 - 164
Target Start/End: Original strand, 42364192 - 42364333
Alignment:
Q  23 ttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtggtg 122  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||       |||||||||||||||| |||||||||||||||||||||| |||||    
T  42364192 ttttggtaaataagatttagttattataatcataggtgatagaaaataattttttcctacaaaaaataacttatttaactattaatttaaggatttggtg 42364291  T
Q  123 taccaatacactcaagttgttgggtgtaccatataatttgcc 164  Q
    ||||||||||||||| || |||||||||||||| ||||||||    
T  42364292 taccaatacactcaaattattgggtgtaccatagaatttgcc 42364333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 23 - 166
Target Start/End: Complemental strand, 31309018 - 31308875
Alignment:
Q  23 ttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtggtg 122  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||       |||| |||||||||||||||||||||||||||||||||| |||||    
T  31309018 ttttggtgaataagatttagttattataatcataggtgatagaaaataattttttcctataaaaaataactcatttaactattaatttaaggatttggtg 31308919  T
Q  123 taccaatacactcaagttgttgggtgtaccatataatttgccta 166  Q
    | ||||||||||||| ||||| ||||||||||| ||||||||||    
T  31308918 ttccaatacactcaaattgttaggtgtaccatagaatttgccta 31308875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 20 - 166
Target Start/End: Complemental strand, 44365768 - 44365619
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnn---cctacaaaaaataactcatttaactattaatttaaggat 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||| ||    
T  44365768 cgtttttggtaaataagatttagttattataattataggtgatagaaaatattttttttttcctacaaaaaataactcatttaactattaatttaagaat 44365669  T
Q  117 gtggtgtaccaatacactcaagttgttgggtgtaccatataatttgccta 166  Q
     ||||||||||||||||| || |||||||||||| |||| ||||||||||    
T  44365668 ttggtgtaccaatacacttaaattgttgggtgtatcatagaatttgccta 44365619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 20 - 164
Target Start/End: Original strand, 47948656 - 47948801
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaa-aataactcatttaactattaatttaaggatgt 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||| |||||||||||||||||||||||||||||| |    
T  47948656 cgtttttggtaaataagatttagttattataattataggtgatagaaaataatttttttctacaaaaaaataactcatttaactattaatttaaggattt 47948755  T
Q  119 ggtgtaccaatacactcaagttgttgggtgtaccatataatttgcc 164  Q
    ||||||||||| |||| || |||||||||||| |||| || |||||    
T  47948756 ggtgtaccaatgcacttaaattgttgggtgtatcatagaacttgcc 47948801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 20 - 167
Target Start/End: Original strand, 39630152 - 39630300
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaacta-ttaatttaaggatgt 118  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||| |||||||||  ||      
T  39630152 cgtttttggtaaatcagatttagttattataattataggtgatagaaaatatttttttcctacaaaaaataactcatttaactatttaatttaaaaattc 39630251  T
Q  119 ggtgtaccaatacactcaagttgttgggtgtaccatataatttgcctat 167  Q
    ||||||| ||||||||||| ||||||| ||||||||| |||||||||||    
T  39630252 ggtgtactaatacactcaaattgttggatgtaccatagaatttgcctat 39630300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 23 - 164
Target Start/End: Complemental strand, 45636229 - 45636089
Alignment:
Q  23 ttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtggtg 122  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||       |||||||||||||||||||||||||||||||||||  ||  ||||    
T  45636229 ttttggtaaataagatttagttattatgattataggtgatagaaaatatttttt-cctacaaaaaataactcatttaactattaatttaaaaattcggtg 45636131  T
Q  123 taccaatacactcaagttgttgggtgtaccatataatttgcc 164  Q
    ||||||||||||||| |||||||||||||| || ||||||||    
T  45636130 taccaatacactcaaattgttgggtgtaccctagaatttgcc 45636089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 78 - 167
Target Start/End: Original strand, 27082666 - 27082755
Alignment:
Q  78 cctacaaaaaataactcatttaactattaatttaaggatgtggtgtaccaatacactcaagttgttgggtgtaccatataatttgcctat 167  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| |||||||||| || ||||||||    
T  27082666 cctacaaaaaataactcatttaactattaatttaaggatttggtgtaccaatacactcaaattgttgagtgtaccatagaacttgcctat 27082755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 20 - 103
Target Start/End: Original strand, 378987 - 379070
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaacta 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||    
T  378987 cgtttttggtaaataagatttagttattataattataggtgatagaaaataattttttcctacaaaaaataactcatttaacta 379070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 20 - 167
Target Start/End: Complemental strand, 27647622 - 27647475
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    |||||||||| ||||||||||| |||||||||||||||||||| ||||| |        || ||||||||||| |||||||||||||||||   |||  |    
T  27647622 cgtttttggttaataagatttaattattataattataggtgatggaaaacaatttttctcttcaaaaaataacacatttaactattaatttgttgattgg 27647523  T
Q  120 gtgtaccaatacactcaagttgttgggtgtaccatataatttgcctat 167  Q
    |||||||||||||||||| || ||| |||||||||| |||||||||||    
T  27647522 gtgtaccaatacactcaaatttttgagtgtaccatagaatttgcctat 27647475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 22 - 161
Target Start/End: Complemental strand, 46959694 - 46959557
Alignment:
Q  22 tttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtggt 121  Q
    |||||| ||||||||||||||||||||||||||||||| ||||||||||       |||||||||| ||| ||||||||||||||||||||| || ||      
T  46959694 tttttgataaataagatttagttattataattataggtcatagaaaatatttttt-cctacaaaaa-taattcatttaactattaatttaagaatttgac 46959597  T
Q  122 gtaccaatacactcaagttgttgggtgtaccatataattt 161  Q
    |||||||||||||||| ||||| ||||||| ||| |||||    
T  46959596 gtaccaatacactcaaattgttaggtgtacgatagaattt 46959557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 20 - 164
Target Start/End: Original strand, 43715010 - 43715154
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| |        || ||||||||||  | ||||||||||| ||||  ||| ||    
T  43715010 cgtttttggtaaataagatttaattattataattataggtgatagaaaacaatttttctcttcaaaaaataatacgtttaactattagtttattgatttg 43715109  T
Q  120 gtgtaccaatacactcaagttgttgggtgtaccatataatttgcc 164  Q
    |||||||||||||| ||| || |||| ||||||||| ||||||||    
T  43715110 gtgtaccaatacacccaaatttttggatgtaccatagaatttgcc 43715154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 20 - 166
Target Start/End: Original strand, 21289075 - 21289221
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    |||||||||| ||||||||||| |||||||||||||||||||| ||||| |        || ||||||||||| |||||||||||||||||   |||  |    
T  21289075 cgtttttggttaataagatttaattattataattataggtgatggaaaacaatttttctcttcaaaaaataacacatttaactattaatttgttgattgg 21289174  T
Q  120 gtgtaccaatacactcaagttgttgggtgtaccatataatttgccta 166  Q
    ||||||| |||||||||| || ||| |||||||||| ||||||||||    
T  21289175 gtgtacctatacactcaaatttttgagtgtaccatagaatttgccta 21289221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 90 - 167
Target Start/End: Original strand, 27079711 - 27079788
Alignment:
Q  90 aactcatttaactattaatttaaggatgtggtgtaccaatacactcaagttgttgggtgtaccatataatttgcctat 167  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||| |||||| |||||||||| || ||||||||    
T  27079711 aactcatttaactattaatttaaggatttggtgtaccaatacactcaaattgttgagtgtaccatagaacttgcctat 27079788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 31 - 167
Target Start/End: Original strand, 26885244 - 26885381
Alignment:
Q  31 aataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtggtgtaccaata 130  Q
    ||||||||||||||||||||||||||  ||||| ||||||        || ||||||| ||||||||||||||||||||||| ||  ||||||||| |||    
T  26885244 aataagatttagttattataattataaatgataaaaaataatatttttcttcaaaaaacaactcatttaactattaatttaaagaattggtgtaccgata 26885343  T
Q  131 cactcaagt-tgttgggtgtaccatataatttgcctat 167  Q
    ||||||| | | |||||||||||||| |||||||||||    
T  26885344 cactcaaatatattgggtgtaccataaaatttgcctat 26885381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 23 - 131
Target Start/End: Complemental strand, 4659897 - 4659789
Alignment:
Q  23 ttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtggtg 122  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||       |||| ||||  ||| |||||||||||||||||||| ||| || ||    
T  4659897 ttttggtaaataagatttaattattataattataggtgatagaaaataattttttcctaaaaaacgtaattcatttaactattaatttaaagatttgttg 4659798  T
Q  123 taccaatac 131  Q
    |||||||||    
T  4659797 taccaatac 4659789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 20 - 164
Target Start/End: Complemental strand, 19547633 - 19547489
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    |||||||||| ||||||||||| ||| |||||||||||||||| ||||| |        || ||||||||||| |||||||||||||||||   |||  |    
T  19547633 cgtttttggttaataagatttaattagtataattataggtgatggaaaacaatttatctcttcaaaaaataacacatttaactattaatttgttgattgg 19547534  T
Q  120 gtgtaccaatacactcaagttgttgggtgtaccatataatttgcc 164  Q
    ||||||| |||||||||| || |||| ||||||||| ||||||||    
T  19547533 gtgtaccgatacactcaaatttttggatgtaccatagaatttgcc 19547489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 20 - 164
Target Start/End: Original strand, 53516843 - 53516987
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    |||||||||| ||||||||||| |||||||||||||||||||| ||||| |        || ||||||||||  |||||||||||||||||   |||  |    
T  53516843 cgtttttggttaataagatttaattattataattataggtgatggaaaacaatttttctcttcaaaaaataatacatttaactattaatttgttgattgg 53516942  T
Q  120 gtgtaccaatacactcaagttgttgggtgtaccatataatttgcc 164  Q
    |||||||||||||||||| || ||  |||||||||| ||||||||    
T  53516943 gtgtaccaatacactcaaatttttaagtgtaccatagaatttgcc 53516987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 21 - 128
Target Start/End: Original strand, 52082285 - 52082392
Alignment:
Q  21 gtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtgg 120  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||||||        || ||||||||||| |||||||||||| |||||| ||| ||     
T  52082285 gtttttgataaataagatttaattattataattataggtgatagaaaataatttttctcttcaaaaaataacacatttaactattgatttaatgatttga 52082384  T
Q  121 tgtaccaa 128  Q
    ||||||||    
T  52082385 tgtaccaa 52082392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 21 - 137
Target Start/End: Complemental strand, 45518781 - 45518665
Alignment:
Q  21 gtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtgg 120  Q
    ||||||||||||||||||||| ||||||||| || |||| ||||||||||        || ||||||||||| |||||||||||| |||||  ||| |||    
T  45518781 gtttttggtaaataagatttaattattataaataaaggtaatagaaaataacttttctcttcaaaaaataacacatttaactattgatttattgatctgg 45518682  T
Q  121 tgtaccaatacactcaa 137  Q
    | |||||||||||||||    
T  45518681 tataccaatacactcaa 45518665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 82 - 164
Target Start/End: Original strand, 25592330 - 25592412
Alignment:
Q  82 caaaaaataactcatttaactattaatttaaggatgtggtgtaccaatacactcaagttgttgggtgtaccatataatttgcc 164  Q
    ||||||||||| |||| |||||||||||||  ||| ||||||| |||||||||||| || |||| ||||||||||||||||||    
T  25592330 caaaaaataacacattaaactattaatttattgatttggtgtatcaatacactcaaatttttggatgtaccatataatttgcc 25592412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 79 - 161
Target Start/End: Complemental strand, 31479641 - 31479559
Alignment:
Q  79 ctacaaaaaataactcatttaactattaatttaaggatgtggtgtaccaatacactcaagttgttgggtgtaccatataattt 161  Q
    |||||||||| ||||||||||| |||||||||||  || ||||||||| |||||||||| || || |||||||||||||||||    
T  31479641 ctacaaaaaaaaactcatttaattattaatttaacaatttggtgtaccgatacactcaaatttttaggtgtaccatataattt 31479559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 21 - 155
Target Start/End: Complemental strand, 32717796 - 32717662
Alignment:
Q  21 gtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtgg 120  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||| |        || || |||||||  ||||||||||||||||||  ||| | |    
T  32717796 gtttttggtaaataagatttcattattataattataggtgatagaaaacaatttttctcttcagaaaataatacatttaactattaatttattgatttag 32717697  T
Q  121 tgtaccaatacactcaagttgttgggtgtaccata 155  Q
    ||||  ||||||||||| || || |||||||||||    
T  32717696 tgtattaatacactcaaattttttggtgtaccata 32717662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 20 - 161
Target Start/End: Complemental strand, 7671945 - 7671806
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    |||||||||| ||||||||||  ||||||||||||||| |||| ||||| |        || ||||||||||| |||||||||||||||||    ||  |    
T  7671945 cgtttttggttaataagattttattattataattatagatgatggaaaaaaaattct--cttcaaaaaataacacatttaactattaatttgtttattgg 7671848  T
Q  120 gtgtaccaatacactcaagttgttgggtgtaccatataattt 161  Q
    |||||||||||||||||| || |||||||||||||| |||||    
T  7671847 gtgtaccaatacactcaaatttttgggtgtaccatagaattt 7671806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 31 - 166
Target Start/End: Complemental strand, 9507037 - 9506901
Alignment:
Q  31 aataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtggtgtaccaata 130  Q
    ||||||||||||||||||||||||||  ||||| ||||||         | ||||||| ||||||||||||||||||||||| ||  ||||||||| ||     
T  9507037 aataagatttagttattataattataaatgataaaaaataatattttttttcaaaaaacaactcatttaactattaatttaaagaattggtgtaccgatg 9506938  T
Q  131 cactcaagt-tgttgggtgtaccatataatttgccta 166  Q
    ||||||| | | ||||||||| |||| ||||||||||    
T  9506937 cactcaaatatattgggtgtatcatagaatttgccta 9506901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 31 - 166
Target Start/End: Complemental strand, 9515012 - 9514876
Alignment:
Q  31 aataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtggtgtaccaata 130  Q
    ||||||||||||||||||||||||||  ||||| ||||||         | ||||||| ||||||||||||||||||||||| ||  ||||||||| ||     
T  9515012 aataagatttagttattataattataaatgataaaaaataatattttttttcaaaaaacaactcatttaactattaatttaaagaattggtgtaccgatg 9514913  T
Q  131 cactcaagt-tgttgggtgtaccatataatttgccta 166  Q
    ||||||| | | ||||||||| |||| ||||||||||    
T  9514912 cactcaaatatattgggtgtatcatagaatttgccta 9514876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 31 - 162
Target Start/End: Complemental strand, 40477891 - 40477759
Alignment:
Q  31 aataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtggtgtaccaata 130  Q
    ||||||||||||||||||||||||||  ||||| ||||||        || |||||||||||| |||||||||||||||||| ||   ||||||||  ||    
T  40477891 aataagatttagttattataattataaatgataaaaaataatatttttcttcaaaaaataacttatttaactattaatttaaagagtgggtgtaccggta 40477792  T
Q  131 cactcaagt-tgttgggtgtaccatataatttg 162  Q
    ||||||| | | |||||||||||||| ||||||    
T  40477791 cactcaaatatattgggtgtaccatagaatttg 40477759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 102 - 155
Target Start/End: Original strand, 379221 - 379274
Alignment:
Q  102 tattaatttaaggatgtggtgtaccaatacactcaagttgttgggtgtaccata 155  Q
    ||||||||||||||| ||||||||||||||||| || |||||||||||||||||    
T  379221 tattaatttaaggatttggtgtaccaatacacttaaattgttgggtgtaccata 379274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 84 - 164
Target Start/End: Complemental strand, 8965996 - 8965915
Alignment:
Q  84 aaaaataactcatttaactattaatttaaggatgtggtgtaccaatacactcaagt-tgttgggtgtaccatataatttgcc 164  Q
    |||||||| |||||||||||| ||||||||||| |||||||||| ||||||||| | |||||| |||||| || ||||||||    
T  8965996 aaaaataattcatttaactataaatttaaggatctggtgtaccagtacactcaaatatgttggatgtaccgtagaatttgcc 8965915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 31 - 165
Target Start/End: Complemental strand, 32636761 - 32636625
Alignment:
Q  31 aataagatttagttattataattataggtgatagaaaat-annnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg-gtgtaccaa 128  Q
    |||||||||||||||||||||||||| |||||| ||||  |        |||||||||| |||||||||||||||||||||||||| ||| ||||| |      
T  32636761 aataagatttagttattataattataagtgataaaaaaacaatatttttctacaaaaaacaactcatttaactattaatttaagga-gtgagtgtatcgg 32636663  T
Q  129 tacactcaagt-tgttgggtgtaccatataatttgcct 165  Q
    ||||||||| | | |||||||||||||| |||||||||    
T  32636662 tacactcaaatatattgggtgtaccatagaatttgcct 32636625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 82 - 165
Target Start/End: Original strand, 4663462 - 4663545
Alignment:
Q  82 caaaaaataactcatttaactattaatttaaggatgtggtgtaccaatacactcaagttgttgggtgtaccatataatttgcct 165  Q
    ||||||||||| ||||||||||||||||||  ||| || |||||||||||||||||  | ||| |||||||||| || ||||||    
T  4663462 caaaaaataacacatttaactattaatttattgatttgatgtaccaatacactcaaaattttgagtgtaccatagaacttgcct 4663545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 30 - 133
Target Start/End: Complemental strand, 3136404 - 3136301
Alignment:
Q  30 aaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtggtgtaccaat 129  Q
    |||||| ||||| ||||||||||||||||||||| |||| |        ||  |||||||||| ||||||||||||||||||  ||| ||||||||||||    
T  3136404 aaataaaatttaattattataattataggtgatataaaacaatttttctcttaaaaaaataacacatttaactattaatttattgatttggtgtaccaat 3136305  T
Q  130 acac 133  Q
    ||||    
T  3136304 acac 3136301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 37492059 - 37492010
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaata 70  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||||||    
T  37492059 cgtttttggtaaataat-tttagttattataattataggtgatagaaaata 37492010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 82 - 166
Target Start/End: Original strand, 25482567 - 25482652
Alignment:
Q  82 caaaaaataactcatttaactattaatttaaggatgtggtgtaccaatacactcaagt-tgttgggtgtaccatataatttgccta 166  Q
    ||||||| ||||||||||||||||||||||| ||   |||||||| |||||||||| | | || |||||||| |||||||||||||    
T  25482567 caaaaaacaactcatttaactattaatttaaagaataggtgtaccgatacactcaaatatattaggtgtaccttataatttgccta 25482652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 82 - 165
Target Start/End: Original strand, 42622173 - 42622257
Alignment:
Q  82 caaaaaataactcatttaactattaatttaaggatgtggtgtaccaatacactcaagt-tgttgggtgtaccatataatttgcct 165  Q
    |||||||||||| |||||||||||||||||| ||   ||||||||  ||||||||| | | |||||||||||||| |||||||||    
T  42622173 caaaaaataacttatttaactattaatttaaagagtgggtgtaccggtacactcaaatatattgggtgtaccataaaatttgcct 42622257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 165
Target Start/End: Original strand, 7352440 - 7352575
Alignment:
Q  31 aataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg-gtgtaccaat 129  Q
    ||||||||||||||||||||||||||  ||||| ||||||         | ||||||||||||||||||||||| ||||||| || ||| ||||||| ||    
T  7352440 aataagatttagttattataattataaatgataaaaaataatatattttttcaaaaaataactcatttaactataaatttaatga-gtgagtgtaccgat 7352538  T
Q  130 acactcaagt-tgttgggtgtaccatataatttgcct 165  Q
    |||||||| | |  ||| ||||||||| |||||||||    
T  7352539 acactcaaatatagtggatgtaccatagaatttgcct 7352575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 165
Target Start/End: Complemental strand, 23456588 - 23456453
Alignment:
Q  31 aataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtgg-tgtaccaat 129  Q
    |||||||||||||||||||||| |||  ||||| ||||||        || ||||||| ||||||||||||||||||||||| || |||| |||||| ||    
T  23456588 aataagatttagttattataataataaatgataaaaaataatatttttcttcaaaaaaaaactcatttaactattaatttaaaga-gtggatgtaccgat 23456490  T
Q  130 acactcaagt-tgttgggtgtaccatataatttgcct 165  Q
    |||||||| | | |||||||||  ||| |||||||||    
T  23456489 acactcaaatatattgggtgtaatatagaatttgcct 23456453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 83 - 165
Target Start/End: Complemental strand, 29491745 - 29491662
Alignment:
Q  83 aaaaaataactcatttaactattaatttaaggatgtggtgtaccaatacactcaagt-tgttgggtgtaccatataatttgcct 165  Q
    ||||||||||| |||||||||||||||||| ||   ||||||||  ||||||||| | | |||||||||||||| |||||||||    
T  29491745 aaaaaataacttatttaactattaatttaaagagtgggtgtaccggtacactcaaatatattgggtgtaccatagaatttgcct 29491662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 165
Target Start/End: Complemental strand, 44522156 - 44522022
Alignment:
Q  31 aataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg-gtgtaccaat 129  Q
    ||||||||||||||||||||| ||||  ||||||||||||        ||  |||||||||||||||||||||||||||||| || |||  |||||||||    
T  44522156 aataagatttagttattataaatataaatgatagaaaataatatttttctt-aaaaaataactcatttaactattaatttaaaga-gtgaatgtaccaat 44522059  T
Q  130 acactcaagt-tgttgggtgtaccatataatttgcct 165  Q
    |||||||| | | |||  ||||||||| |||||||||    
T  44522058 acactcaaatatattgaatgtaccatagaatttgcct 44522022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 100
Target Start/End: Complemental strand, 45290876 - 45290796
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaa 100  Q
    ||||||||| |||||||||||||||||||||||| |||||  |||||||||       ||| |||||||||||| ||||||    
T  45290876 cgtttttggcaaataagatttagttattataattctaggtattagaaaataattttttccttcaaaaaataacttatttaa 45290796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 82 - 164
Target Start/End: Original strand, 50030075 - 50030158
Alignment:
Q  82 caaaaaataactcatttaactattaatttaaggatgtggtgtaccaatacactcaagt-tgttgggtgtaccatataatttgcc 164  Q
    ||||||||||||||||||||||| ||||||||| | |||| ||||  ||||||||| | ||||||||||||  || ||||||||    
T  50030075 caaaaaataactcatttaactataaatttaagggtttggtatacctgtacactcaaatatgttgggtgtacggtagaatttgcc 50030158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 788733 - 788783
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaata 70  Q
    |||||||||||||| | ||||| ||||||||||||||||||||| ||||||    
T  788733 cgtttttggtaaatgatatttaattattataattataggtgatataaaata 788783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 83 - 137
Target Start/End: Complemental strand, 34593774 - 34593720
Alignment:
Q  83 aaaaaataactcatttaactattaatttaaggatgtggtgtaccaatacactcaa 137  Q
    ||||||||| | |||||||||||||||||| ||| ||||||| ||||||||||||    
T  34593774 aaaaaataattaatttaactattaatttaaagatttggtgtaacaatacactcaa 34593720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 19 - 167
Target Start/End: Complemental strand, 44568729 - 44568580
Alignment:
Q  19 tcgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnnc--ctacaaaaaataactcatttaactattaatttaaggat 116  Q
    ||||||||||||||||||||||| ||||||||||| |   ||||||||||||          || ||||||| ||   |||||| ||||||||||| | |    
T  44568729 tcgtttttggtaaataagatttaattattataattgtcaatgatagaaaataattagtttttcttcaaaaaacaatcaatttaattattaatttaatgtt 44568630  T
Q  117 gtggtgtaccaatacactcaagttgttgggtgtaccatataatttgcctat 167  Q
     ||||||||| ||||||||||  |||| ||||||||||| |||||||||||    
T  44568629 -tggtgtaccgatacactcaaaatgttaggtgtaccatagaatttgcctat 44568580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 22 - 56
Target Start/End: Original strand, 51040091 - 51040125
Alignment:
Q  22 tttttggtaaataagatttagttattataattata 56  Q
    |||||||||||||||||||||||||||||||||||    
T  51040091 tttttggtaaataagatttagttattataattata 51040125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 164
Target Start/End: Original strand, 29629251 - 29629389
Alignment:
Q  23 ttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtggtg 122  Q
    ||||||||||||| ||||| ||||||||||||||||| |||| |||||        || || |||||||| |||||||  |||||||||  ||| |||||    
T  29629251 ttttggtaaataatatttaattattataattataggtaatagtaaataattttct-cttcataaaataacacatttaa--attaatttattgatttggtg 29629347  T
Q  123 taccaatacactcaagttgttgggtgtaccatataatttgcc 164  Q
    |||||||||||  || || || ||||||||||| | ||||||    
T  29629348 taccaatacacctaaattttttggtgtaccataaagtttgcc 29629389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 31 - 68
Target Start/End: Original strand, 51756364 - 51756401
Alignment:
Q  31 aataagatttagttattataattataggtgatagaaaa 68  Q
    |||||||||||||||||||||||||| |||||||||||    
T  51756364 aataagatttagttattataattataagtgatagaaaa 51756401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 172
Target Start/End: Complemental strand, 15804402 - 15804250
Alignment:
Q  23 ttttggtaaataagatttagttattataattataggtgatagaaaata--nnnnnnncctacaaaaaataact-catttaactattaatttaaggatgtg 119  Q
    ||||||||||||||||||| |||||||||||||   ||||||||||||          || ||||||| ||||  |||||| ||||||||||| | | ||    
T  15804402 ttttggtaaataagatttaattattataattatcaatgatagaaaataattcttttttcttcaaaaaacaactaaatttaattattaatttaatgctttg 15804303  T
Q  120 gtgtaccaatacactcaagttgttgggtgtaccatataatttgcctatcaaat 172  Q
    |||||    |||||||||  |||||||||||||||| ||||||||||| ||||    
T  15804302 gtgtaatggtacactcaaaatgttgggtgtaccatagaatttgcctataaaat 15804250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 82 - 164
Target Start/End: Complemental strand, 46671420 - 46671337
Alignment:
Q  82 caaaaaataactcatttaactattaatttaaggatgtg-gtgtaccaatacactcaagt-tgttgggtgtaccatataatttgcc 164  Q
    ||||||| ||||||||||||||||||||||| || ||| |||||||  ||||||||| | | ||||||||||| |||||||||||    
T  46671420 caaaaaacaactcatttaactattaatttaaaga-gtgagtgtaccggtacactcaaatatattgggtgtaccgtataatttgcc 46671337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 95 - 167
Target Start/End: Complemental strand, 47470497 - 47470425
Alignment:
Q  95 atttaactattaatttaaggatgtggtgtaccaatacactcaagttgttgggtgtaccatataatttgcctat 167  Q
    |||| ||||||||||||||||| |||||||| ||||||||||  || |||| |||| |||| || ||||||||    
T  47470497 atttgactattaatttaaggatttggtgtactaatacactcacattcttggatgtagcataaaacttgcctat 47470425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 70
Target Start/End: Original strand, 53176841 - 53176889
Alignment:
Q  22 tttttggtaaataagatttagttattataattataggtgatagaaaata 70  Q
    |||||||||||||||||||| |||||||||||||   ||||||||||||    
T  53176841 tttttggtaaataagatttaattattataattatcaatgatagaaaata 53176889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 83 - 166
Target Start/End: Complemental strand, 4393061 - 4392978
Alignment:
Q  83 aaaaaataactcatttaactattaatttaaggatgtggtgtaccaatacactcaagttgttgggtgtaccatataatttgccta 166  Q
    |||||||||||| ||||| |||||||||||  || || ||||||  ||||||||| |||||  |||||| ||| ||||||||||    
T  4393061 aaaaaataactcgtttaattattaatttaataatttgatgtacccctacactcaaattgttaagtgtactatagaatttgccta 4392978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 90 - 164
Target Start/End: Complemental strand, 8433512 - 8433437
Alignment:
Q  90 aactcatttaactattaatttaaggatgtggtgtaccaatacactcaagt-tgttgggtgtaccatataatttgcc 164  Q
    ||||||||||||||| | ||||||| | |||||||||  ||||||||| | ||||||||||||| || ||||||||    
T  8433512 aactcatttaactataattttaagggtttggtgtaccggtacactcaaatatgttgggtgtaccgtagaatttgcc 8433437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 23 - 70
Target Start/End: Original strand, 31185695 - 31185742
Alignment:
Q  23 ttttggtaaataagatttagttattataattataggtgatagaaaata 70  Q
    ||||||||||||||||||| |||||||||||||   ||||||||||||    
T  31185695 ttttggtaaataagatttaattattataattatcaatgatagaaaata 31185742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 23 - 70
Target Start/End: Complemental strand, 39678242 - 39678195
Alignment:
Q  23 ttttggtaaataagatttagttattataattataggtgatagaaaata 70  Q
    ||||| ||||||||||||| ||||||||||||||| ||||| ||||||    
T  39678242 ttttgataaataagatttaattattataattatagatgataaaaaata 39678195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 82 - 164
Target Start/End: Original strand, 45636005 - 45636088
Alignment:
Q  82 caaaaaataactcatttaactattaatttaaggatgtggtgtaccaatacactcaagt-tgttgggtgtaccatataatttgcc 164  Q
    |||||||||||| |||||||||| ||||||||| | |||| ||||  ||||||||| | ||||||||||||  || ||||||||    
T  45636005 caaaaaataacttatttaactataaatttaagggtttggtataccggtacactcaaatatgttgggtgtacggtagaatttgcc 45636088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 165
Target Start/End: Original strand, 4521607 - 4521676
Alignment:
Q  95 atttaactattaatttaaggatgtggtgtaccaatacactcaagttgttgggtgtaccatataatttgcct 165  Q
    |||||| ||||||||||| | | |||||||||  |||||||||  |||||||||||||||| |||||||||    
T  4521607 atttaattattaatttaatgtt-tggtgtaccggtacactcaaaatgttgggtgtaccatagaatttgcct 4521676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 160
Target Start/End: Complemental strand, 5528782 - 5528704
Alignment:
Q  83 aaaaaataactcatttaactattaatttaaggatgtggtgtaccaatacactcaagt-tgttgggtgtaccatataatt 160  Q
    |||||| ||||||||||||||| ||||||||| | | |||||||  ||||||||| | |||| ||||||||||| ||||    
T  5528782 aaaaaacaactcatttaactataaatttaagggtttagtgtaccggtacactcaaatatgttaggtgtaccatagaatt 5528704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 164
Target Start/End: Original strand, 28718251 - 28718333
Alignment:
Q  82 caaaaaataactcatttaactattaatttaaggatgtggtgtaccaatacactcaagttgttgggtgtaccatataatttgcc 164  Q
    ||||||| |||| |||||| ||||||||||| | | ||||| |||  |||||||||  | |||||||||||||| ||||||||    
T  28718251 caaaaaacaactaatttaattattaatttaaaggtttggtgcaccggtacactcaaaattttgggtgtaccatagaatttgcc 28718333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 112
Target Start/End: Complemental strand, 36098954 - 36098924
Alignment:
Q  82 caaaaaataactcatttaactattaatttaa 112  Q
    |||||||||||||||||||||||||||||||    
T  36098954 caaaaaataactcatttaactattaatttaa 36098924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 164
Target Start/End: Complemental strand, 40021160 - 40021079
Alignment:
Q  84 aaaaataactcatttaactattaatttaaggatgtgg-tgtaccaatacactcaagt-tgttgggtgtaccatataatttgcc 164  Q
    ||||| ||||||||||||||||||||||| || |||| ||||||| ||||||||| | | |||| ||||||||| ||||||||    
T  40021160 aaaaacaactcatttaactattaatttaaaga-gtggatgtaccagtacactcaaatatattggatgtaccatagaatttgcc 40021079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 161
Target Start/End: Original strand, 52776778 - 52776856
Alignment:
Q  83 aaaaaataactcatttaactattaatttaaggatgtggtgtaccaatacactcaagttgttgggtgtaccatataattt 161  Q
    |||||| ||||| ||||| |||||||||||  || |||||||||  ||||||||| || |||||||||| ||| |||||    
T  52776778 aaaaaacaactcgtttaattattaatttaataatttggtgtaccggtacactcaaattattgggtgtacgatagaattt 52776856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 13756572 - 13756605
Alignment:
Q  23 ttttggtaaataagatttagttattataattata 56  Q
    ||||| ||||||||||||||||||||||||||||    
T  13756572 ttttgataaataagatttagttattataattata 13756605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 83 - 164
Target Start/End: Original strand, 35375858 - 35375939
Alignment:
Q  83 aaaaaataactcatttaactattaatttaaggatgtggtgtaccaatacactcaagttgttgggtgtaccatataatttgcc 164  Q
    |||||| ||||||||||| |||||||||||  || | |||||||  |||||| || ||||||| |||||| || ||||||||    
T  35375858 aaaaaacaactcatttaattattaatttaaaaatttagtgtaccggtacacttaaattgttggatgtaccgtagaatttgcc 35375939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 55
Target Start/End: Complemental strand, 15670123 - 15670091
Alignment:
Q  23 ttttggtaaataagatttagttattataattat 55  Q
    ||||||||||||||||||| |||||||||||||    
T  15670123 ttttggtaaataagatttaattattataattat 15670091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 70
Target Start/End: Complemental strand, 29491786 - 29491738
Alignment:
Q  22 tttttggtaaataagatttagttattataattataggtgatagaaaata 70  Q
    |||||| | ||||||||||||||||||||||||||  ||||| ||||||    
T  29491786 tttttgattaataagatttagttattataattataaatgataaaaaata 29491738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 70
Target Start/End: Original strand, 37146508 - 37146556
Alignment:
Q  22 tttttggtaaataagatttagttattataattataggtgatagaaaata 70  Q
    |||||||||||||||||||||||||||| ||| ||  ||||||| ||||    
T  37146508 tttttggtaaataagatttagttattattattgtaaatgatagagaata 37146556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 70
Target Start/End: Complemental strand, 40473978 - 40473930
Alignment:
Q  22 tttttggtaaataagatttagttattataattataggtgatagaaaata 70  Q
    |||||| | ||||||||||||||||||||||||||  ||||| ||||||    
T  40473978 tttttgatgaataagatttagttattataattataaatgataaaaaata 40473930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 166
Target Start/End: Complemental strand, 42622691 - 42622607
Alignment:
Q  84 aaaaataactcatttaact-attaatttaaggatgtggtgtaccaatacactcaagttgtt-gggtgtaccatataatttgccta 166  Q
    ||||| ||||||||||| | |||||||||| ||| ||||||||   ||||||||| || || |||||||||||| ||||||||||    
T  42622691 aaaaacaactcatttaatttattaatttaacgatttggtgtactggtacactcaatttttttgggtgtaccatagaatttgccta 42622607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 95 - 163
Target Start/End: Complemental strand, 47175535 - 47175468
Alignment:
Q  95 atttaactattaatttaaggatgtggtgtaccaatacactcaagttgttgggtgtaccatataatttgc 163  Q
    |||||| ||||||||||| | | |||||||||  |||||||||  |||||||||||||||| |||||||    
T  47175535 atttaattattaatttaatgtt-tggtgtaccggtacactcaaaatgttgggtgtaccatagaatttgc 47175468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 114
Target Start/End: Original strand, 54262857 - 54262889
Alignment:
Q  82 caaaaaataactcatttaactattaatttaagg 114  Q
    ||||||||||||||||||||||| |||||||||    
T  54262857 caaaaaataactcatttaactataaatttaagg 54262889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 110; Significance: 1e-55; HSPs: 56)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 20 - 162
Target Start/End: Complemental strand, 6884303 - 6884161
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||| ||    
T  6884303 cgtttttggtaaataagatttagttattataattataggtgatagaaaatatttttttcctacaaaaaataactcatttaactattaatttaaggatttg 6884204  T
Q  120 gtgtaccaatacactcaagttgttgggtgtaccatataatttg 162  Q
    |||||||||||||||||| ||||||||||||||||| ||||||    
T  6884203 gtgtaccaatacactcaaattgttgggtgtaccatagaatttg 6884161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 20 - 167
Target Start/End: Complemental strand, 34665715 - 34665568
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||| ||    
T  34665715 cgtttttggtaaataagatttagttattataattataggtgatagaaaatatttttttcctacaaaaaataactcatttaactattaatttaaggatttg 34665616  T
Q  120 gtgtaccaatacactcaagttgttgggtgtaccatataatttgcctat 167  Q
    |||||||||||||||||| ||||||||| ||||||| |||||| ||||    
T  34665615 gtgtaccaatacactcaaattgttgggtataccatagaatttgtctat 34665568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 20 - 166
Target Start/End: Original strand, 4673864 - 4674010
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||| || ||    
T  4673864 cgtttttggtaaataagatttagttattataattataggtgatagaaaatatttttttcctacaaaaaataactcatttaactattaatttaagaatttg 4673963  T
Q  120 gtgtaccaatacactcaagttgttgggtgtaccatataatttgccta 166  Q
    |||||||||||||||||| ||||||| ||||||||| ||||||||||    
T  4673964 gtgtaccaatacactcaaattgttggatgtaccatagaatttgccta 4674010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 22 - 165
Target Start/End: Original strand, 14533086 - 14533229
Alignment:
Q  22 tttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtggt 121  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||| ||||    
T  14533086 tttttggtaaataagatttagttattataattataggtgatagaaaataattttttcctacaaaaaataactcatttaactattaatttaaggatttggt 14533185  T
Q  122 gtaccaatacactcaagttgttgggtgtaccatataatttgcct 165  Q
    ||||||||||| | || ||||||||||||||||| |||||||||    
T  14533186 gtaccaatacatttaaattgttgggtgtaccatagaatttgcct 14533229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 20 - 164
Target Start/End: Complemental strand, 11227771 - 11227627
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||| |||||||||||||||||||||| ||    
T  11227771 cgtttttggtaaataagatttagttattataattataggtgatagaaaatatttttttcctacaaaaaataacttatttaactattaatttaaggatttg 11227672  T
Q  120 gtgtaccaatacactcaagttgttgggtgtaccatataatttgcc 164  Q
    |||||||||||||||||| || |||| ||||||||| ||||||||    
T  11227671 gtgtaccaatacactcaaattattggatgtaccatagaatttgcc 11227627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 20 - 164
Target Start/End: Original strand, 42427833 - 42427977
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||| |||||||||||||||||||||| ||    
T  42427833 cgtttttggtaaataagatttagttattataattataggtgatagaaaataattttttcctacaaaaaataacttatttaactattaatttaaggatttg 42427932  T
Q  120 gtgtaccaatacactcaagttgttgggtgtaccatataatttgcc 164  Q
    ||||||||||||||| || ||||||||||||||||| || |||||    
T  42427933 gtgtaccaatacacttaaattgttgggtgtaccatagaacttgcc 42427977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 20 - 164
Target Start/End: Complemental strand, 5092140 - 5091997
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||| ||    
T  5092140 cgtttttggtaaataagatttagttattataattataggtgatagaaaatatttttt-cctacaaaaaataactcatttaactattaatttaaggatttg 5092042  T
Q  120 gtgtaccaatacactcaagttgttgggtgtaccatataatttgcc 164  Q
    |||||||||||||||||| ||||| | ||||||||| ||||||||    
T  5092041 gtgtaccaatacactcaaattgttagatgtaccatagaatttgcc 5091997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 20 - 166
Target Start/End: Original strand, 11813458 - 11813605
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnn-cctacaaaaaataactcatttaactattaatttaaggatgt 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||| ||||||||||||||||||||||| |    
T  11813458 cgtttttggtaaataagatttagttattataattataggtgatagaaaatattttttttcctacaaaaaataacacatttaactattaatttaaggattt 11813557  T
Q  119 ggtgtaccaatacactcaagttgttgggtgtaccatataatttgccta 166  Q
    ||||||||||||||||||| ||||||||||||||||| ||||| ||||    
T  11813558 ggtgtaccaatacactcaaattgttgggtgtaccatagaattttccta 11813605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 20 - 162
Target Start/End: Original strand, 5389463 - 5389605
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||| || ||    
T  5389463 cgtttttggtaaataagatttagttattataattataggtgatagaaaatatttttttcctacaaaaaataactcatttaactattaatttaagtatttg 5389562  T
Q  120 gtgtaccaatacactcaagttgttgggtgtaccatataatttg 162  Q
    |||||||||||||||||| ||| ||| ||||||||| ||||||    
T  5389563 gtgtaccaatacactcaaattggtggatgtaccatagaatttg 5389605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 29 - 167
Target Start/End: Complemental strand, 37083343 - 37083205
Alignment:
Q  29 taaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtggtgtaccaa 128  Q
    ||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||  ||  ||||||||||    
T  37083343 taaataagatttagttattataattataggtgatagaaaatatttttttcctacaaaaaataactcatttaactattaatttaaaaattcggtgtaccaa 37083244  T
Q  129 tacactcaagttgttgggtgtaccatataatttgcctat 167  Q
    |||||| || ||||||| ||||||||||||||| |||||    
T  37083243 tacacttaaattgttggatgtaccatataatttccctat 37083205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 20 - 167
Target Start/End: Complemental strand, 1353650 - 1353504
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctac-aaaaaataactcatttaactattaatttaaggatgt 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||       ||||| |||||||||| |||||||||||  |||||||||| |    
T  1353650 cgtttttggtaaataagatttagttattataattataggtgatagaaaatatttttttcctacaaaaaaataacccatttaactat--atttaaggattt 1353553  T
Q  119 ggtgtaccaatacactcaagttgttgggtgtaccatataatttgcctat 167  Q
    ||||||||||||||||||  || |||||||||||||| |||||||||||    
T  1353552 ggtgtaccaatacactcatattattgggtgtaccatagaatttgcctat 1353504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 20 - 162
Target Start/End: Original strand, 33423276 - 33423420
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactat--taatttaaggatg 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||  ||||||||||||     
T  33423276 cgtttttggtaaataagatttagttattataattataggtgatagaaaataatttttttctacaaaaaataactcatttaactattataatttaaggatt 33423375  T
Q  118 tggtgtaccaatacactcaagttgttgggtgtaccatataatttg 162  Q
    ||||||||||||||| |||| ||||| | ||||||||| ||||||    
T  33423376 tggtgtaccaatacattcaaattgttagatgtaccatagaatttg 33423420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 20 - 164
Target Start/End: Original strand, 3383450 - 3383593
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    |||||||||||||||||||||| |||||||| |||||||||||||||| ||       |||||||||||| |||||||||||||||||||||||||| ||    
T  3383450 cgtttttggtaaataagatttaattattatagttataggtgatagaaa-taattttttcctacaaaaaatcactcatttaactattaatttaaggatttg 3383548  T
Q  120 gtgtaccaatacactcaagttgttgggtgtaccatataatttgcc 164  Q
    |||||||||||||||||| | ||||| ||||||||| ||||||||    
T  3383549 gtgtaccaatacactcaaatggttggatgtaccataaaatttgcc 3383593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 25 - 165
Target Start/End: Complemental strand, 59059 - 58919
Alignment:
Q  25 ttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtggtgta 124  Q
    ||||| |||||||||||||||||||||| |||| ||||||||||||       | ||||||||||||||||||||||||||||||||||||| || ||||    
T  59059 ttggtgaataagatttagttattataatcatagatgatagaaaataattttttcatacaaaaaataactcatttaactattaatttaaggatttgatgta 58960  T
Q  125 ccaatacactcaagttgttgggtgtaccatataatttgcct 165  Q
    ||||||||||||| || |||||||||||||| | |||||||    
T  58959 ccaatacactcaaattattgggtgtaccatagattttgcct 58919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 20 - 165
Target Start/End: Original strand, 38963326 - 38963471
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaa-taactcatttaactattaatttaaggatgt 118  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||       | ||||||||| |||| ||||||||||||||||||||||| |    
T  38963326 cgtttttggtaaataagatttagttattataattataggtgataaaaaatatttttttc-tacaaaaaaataacccatttaactattaatttaaggattt 38963424  T
Q  119 ggtgtaccaatacactcaagttgttgggtgtaccatataatttgcct 165  Q
    | |||||||||||| |||| ||||||| ||||||||| |||||||||    
T  38963425 gatgtaccaatacattcaaattgttggatgtaccatacaatttgcct 38963471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 21 - 164
Target Start/End: Complemental strand, 12547507 - 12547364
Alignment:
Q  21 gtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtgg 120  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||||||        || ||||||||||| ||||||||||||||||||| ||| |||    
T  12547507 gtttttgataaataagatttaattattataattataggtgatagaaaataatttttctcttcaaaaaataacacatttaactattaatttaatgatttgg 12547408  T
Q  121 tgtaccaatacactcaagttgttgggtgtaccatataatttgcc 164  Q
    |||| |||||||||||  |  |||||||||||||| ||||||||    
T  12547407 tgtatcaatacactcatatctttgggtgtaccatagaatttgcc 12547364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 20 - 164
Target Start/End: Original strand, 15771572 - 15771716
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    |||||||| ||||||||||||| | ||||||||||||||||||||||||||       |||||||||||||||| ||| |||||||||||||| |||  |    
T  15771572 cgtttttgttaaataagatttaatcattataattataggtgatagaaaataattttttcctacaaaaaataacttattgaactattaatttaatgattgg 15771671  T
Q  120 gtgtaccaatacactcaagttgttgggtgtaccatataatttgcc 164  Q
    ||||||||||||||| || |  |||||||||| ||| ||||||||    
T  15771672 gtgtaccaatacacttaaataattgggtgtactatagaatttgcc 15771716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 21 - 164
Target Start/End: Original strand, 34438448 - 34438592
Alignment:
Q  21 gtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaa-taactcatttaactattaatttaaggatgtg 119  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||| |        || ||||||| |||| ||||||||||||||||||  ||| ||    
T  34438448 gtttttggtaaataagatttaattattataattataggtgatagaaaacaacttttctcttcaaaaaaataacacatttaactattaatttattgatttg 34438547  T
Q  120 gtgtaccaatacactcaagttgttgggtgtaccatataatttgcc 164  Q
    |||| ||||||||||||| || |||| ||||||||| ||||||||    
T  34438548 gtgttccaatacactcaaattattggatgtaccataaaatttgcc 34438592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 20 - 135
Target Start/End: Complemental strand, 40370609 - 40370494
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||        || ||||||||||| ||||||||||||||||||  ||| ||    
T  40370609 cgtttttggtaaataagatttaattattataattataggtgatagaaaataatttttctcttcaaaaaataacacatttaactattaatttattgatttg 40370510  T
Q  120 gtgtaccaatacactc 135  Q
    || |||||||||||||    
T  40370509 gtttaccaatacactc 40370494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 29 - 154
Target Start/End: Complemental strand, 5420362 - 5420237
Alignment:
Q  29 taaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtggtgtaccaa 128  Q
    ||||||||||||| ||||||||||||||||||||||||||||        || ||||||||| | ||||||||||||||||||| ||| |||||||||||    
T  5420362 taaataagatttaattattataattataggtgatagaaaataatttttctcttcaaaaaatagcacatttaactattaatttaatgatttggtgtaccaa 5420263  T
Q  129 tacactcaagttgttgggtgtaccat 154  Q
    ||||||||| |  || ||||||||||    
T  5420262 tacactcaaatctttaggtgtaccat 5420237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 20 - 166
Target Start/End: Original strand, 6513526 - 6513672
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    |||||||||||||||||||||| |||| | ||||||||| ||||||||| |        || ||||||||||| ||||||||||||||||||  ||| |     
T  6513526 cgtttttggtaaataagatttaattatcacaattataggagatagaaaacaattttactcttcaaaaaataacacatttaactattaatttattgattta 6513625  T
Q  120 gtgtaccaatacactcaagttgttgggtgtaccatataatttgccta 166  Q
    |||||||||||||||||| |  || ||||||||||| ||||||||||    
T  6513626 gtgtaccaatacactcaaatctttaggtgtaccatagaatttgccta 6513672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 21 - 134
Target Start/End: Original strand, 6438438 - 6438551
Alignment:
Q  21 gtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtgg 120  Q
    ||||||| ||||||||||||| ||||||||||||||||||||| |||| |        || ||||||||||| ||||||||||||||||||| ||| |||    
T  6438438 gtttttgataaataagatttaattattataattataggtgatataaaacaatttttctcttcaaaaaataacacatttaactattaatttaatgatttgg 6438537  T
Q  121 tgtaccaatacact 134  Q
    ||||||||||||||    
T  6438538 tgtaccaatacact 6438551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 20 - 164
Target Start/End: Complemental strand, 7467271 - 7467120
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| |        || |||||||||||  |||||||||||||||||  ||| ||    
T  7467271 cgtttttggtaaataagatttaattattataattataggtgatagaaaacaatttttctcttcaaaaaataacagatttaactattaatttattgatttg 7467172  T
Q  120 gtg-------taccaatacactcaagttgttgggtgtaccatataatttgcc 164  Q
    |||       ||||||||||||||| || |||||||||||||| ||||||||    
T  7467171 gtgtaccaaataccaatacactcaaatttttgggtgtaccatagaatttgcc 7467120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 21 - 162
Target Start/End: Complemental strand, 36489501 - 36489360
Alignment:
Q  21 gtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtgg 120  Q
    ||||||||||||||| ||||| ||||||||||||||| ||||||||||||        || ||||||||||  ||||||||||||||||||  ||| | |    
T  36489501 gtttttggtaaataaaatttaattattataattatagatgatagaaaataatttttctcttcaaaaaataatacatttaactattaatttattgatttag 36489402  T
Q  121 tgtaccaatacactcaagttgttgggtgtaccatataatttg 162  Q
    ||||||||||||||||| |  |||||||||| ||| ||||||    
T  36489401 tgtaccaatacactcaaatctttgggtgtacaatagaatttg 36489360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 20 - 166
Target Start/End: Complemental strand, 11598259 - 11598112
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    |||||||||| ||||||||||| |||||||||||||||||||| ||||| |        || ||||||||||| |||||||||||||||||   |||  |    
T  11598259 cgtttttggttaataagatttaattattataattataggtgatggaaaacaatttttctcttcaaaaaataacacatttaactattaatttgttgattgg 11598160  T
Q  120 gtgtaccaatacactc-aagttgttgggtgtaccatataatttgccta 166  Q
    |||||||||||||||| || || ||| |||||||||| ||||||||||    
T  11598159 gtgtaccaatacactcaaattttttgagtgtaccatagaatttgccta 11598112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 20 - 165
Target Start/End: Original strand, 20212416 - 20212560
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    |||||||||| ||||||||||| ||||||||||||||||||||  |||| |        || ||||||||||| |||||||||||||||||   ||| ||    
T  20212416 cgtttttggttaataagatttaattattataattataggtgatgtaaaacaatttttctcttcaaaaaataacacatttaactattaatttgttgat-tg 20212514  T
Q  120 gtgtaccaatacactcaagttgttgggtgtaccatataatttgcct 165  Q
    ||||||||||||||| || || ||| |||||||||| |||||||||    
T  20212515 gtgtaccaatacacttaaatttttgagtgtaccatagaatttgcct 20212560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 20 - 164
Target Start/End: Complemental strand, 37909523 - 37909379
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    |||||||||| ||||||||||| |||||||||||||||||||| ||||| |        || ||||||||||| |||||||||||||||||   |||  |    
T  37909523 cgtttttggttaataagatttaattattataattataggtgatggaaaacaatttttctcttcaaaaaataacacatttaactattaatttgttgattgg 37909424  T
Q  120 gtgtaccaatacactcaagttgttgggtgtaccatataatttgcc 164  Q
    |||||| ||||||||||| || ||| |||||| ||| ||||||||    
T  37909423 gtgtactaatacactcaaatttttgagtgtactatagaatttgcc 37909379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 22 - 137
Target Start/End: Original strand, 19636362 - 19636477
Alignment:
Q  22 tttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtggt 121  Q
    |||||| ||||||||||||| ||||||||| || ||||||||||||| |        || |||||||||||  |||||||||||||||||  ||| ||||    
T  19636362 tttttgctaaataagatttaattattataaataaaggtgatagaaaacaatttttctcttcaaaaaataacatatttaactattaatttattgatctggt 19636461  T
Q  122 gtaccaatacactcaa 137  Q
    ||||||||||||||||    
T  19636462 gtaccaatacactcaa 19636477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 22 - 137
Target Start/End: Original strand, 19834955 - 19835070
Alignment:
Q  22 tttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtggt 121  Q
    |||||| ||||||||||||| ||||||||| || ||||||||||||| |        || |||||||||||  |||||||||||||||||  ||| ||||    
T  19834955 tttttgctaaataagatttaattattataaataaaggtgatagaaaacaatttttctcttcaaaaaataacatatttaactattaatttattgatctggt 19835054  T
Q  122 gtaccaatacactcaa 137  Q
    ||||||||||||||||    
T  19835055 gtaccaatacactcaa 19835070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 21 - 70
Target Start/End: Original strand, 3810725 - 3810774
Alignment:
Q  21 gtttttggtaaataagatttagttattataattataggtgatagaaaata 70  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  3810725 gtttttggtaaataagatttaattattataattatagatgatagaaaata 3810774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 31 - 164
Target Start/End: Complemental strand, 45157664 - 45157530
Alignment:
Q  31 aataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtggtgtaccaata 130  Q
    ||||||||||||||||||||| ||||  ||||||||||||        || ||||||| |||||||||||| |||||||||| ||   ||||||||  ||    
T  45157664 aataagatttagttattataaatataaatgatagaaaataatatttttcttcaaaaaacaactcatttaaccattaatttaaagagtgggtgtaccggta 45157565  T
Q  131 cactcaagt-tgttgggtgtaccatataatttgcc 164  Q
    ||||||| | | |||||||||||||| ||||||||    
T  45157564 cactcaaatatattgggtgtaccatagaatttgcc 45157530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 78 - 162
Target Start/End: Original strand, 8371886 - 8371970
Alignment:
Q  78 cctacaaaaaataactcatttaactattaatttaaggatgtggtgtaccaatacactcaagttgttgggtgtaccatataatttg 162  Q
    |||||||||||||| | ||||||||||||||||||  || ||||||| ||||||||| || || |||| ||||||||| ||||||    
T  8371886 cctacaaaaaataatttatttaactattaatttaaaaatttggtgtatcaatacacttaaattattggatgtaccatagaatttg 8371970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 107 - 163
Target Start/End: Complemental strand, 42046132 - 42046076
Alignment:
Q  107 atttaaggatgtggtgtaccaatacactcaagttgttgggtgtaccatataatttgc 163  Q
    |||||||||| |||||||||||||||||||| |||||| |||||||||| |||||||    
T  42046132 atttaaggatttggtgtaccaatacactcaaattgttgagtgtaccatagaatttgc 42046076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 22 - 167
Target Start/End: Complemental strand, 30981021 - 30980877
Alignment:
Q  22 tttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg-g 120  Q
    |||||| | ||||||||||||||||||  ||||||||||||| ||||||        || ||||||| ||||||||||||||||||||||| || |||      
T  30981021 tttttgatgaataagatttagttatta--attataggtgataaaaaataatatttttcttcaaaaaacaactcatttaactattaatttaaaga-gtgaa 30980925  T
Q  121 tgtaccaatacactcaagt-tgttgggtgtaccatataatttgcctat 167  Q
    |||||||||||||| || | | |||||||||||||| |||||| ||||    
T  30980924 tgtaccaatacactaaaatatattgggtgtaccatagaatttgtctat 30980877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 31 - 164
Target Start/End: Complemental strand, 39620327 - 39620191
Alignment:
Q  31 aataagatttagttattataattataggtgatagaaaatannnnnnncctac--aaaaaataactcatttaactattaatttaaggatgtggtgtaccaa 128  Q
    ||||||||||||||||||||||||||  ||||| ||||||        || |  |||||| |||| |||||||||||||||||| ||   |||||||| |    
T  39620327 aataagatttagttattataattataaatgataaaaaataatatttttcttctaaaaaaacaacttatttaactattaatttaaagagtgggtgtaccga 39620228  T
Q  129 tacactcaagt-tgttgggtgtaccatataatttgcc 164  Q
    ||||||||| | | |||||||||||||| ||||||||    
T  39620227 tacactcaaatatattgggtgtaccataaaatttgcc 39620191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 97 - 164
Target Start/End: Complemental strand, 32499217 - 32499150
Alignment:
Q  97 ttaactattaatttaaggatgtggtgtaccaatacactcaagttgttgggtgtaccatataatttgcc 164  Q
    |||||||||||||||  ||| ||||||| |||||||||||| || || ||||||||||| ||||||||    
T  32499217 ttaactattaatttattgatttggtgtatcaatacactcaaattctttggtgtaccatagaatttgcc 32499150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 83 - 165
Target Start/End: Original strand, 8362731 - 8362813
Alignment:
Q  83 aaaaaataactcatttaactattaatttaaggatgtggtgtaccaatacactcaagttgttgggtgtaccatataatttgcct 165  Q
    |||||| ||||| ||||| |||||||||||  || |||||||||  ||||||||| |||||||||||  |||| |||||||||    
T  8362731 aaaaaacaactcgtttaattattaatttaataatttggtgtaccggtacactcaaattgttgggtgtgtcatagaatttgcct 8362813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 83 - 165
Target Start/End: Complemental strand, 11088297 - 11088215
Alignment:
Q  83 aaaaaataactcatttaactattaatttaaggatgtggtgtaccaatacactcaagttgttgggtgtaccatataatttgcct 165  Q
    |||||| ||||| ||||| |||||||||||  || |||||||||  ||||||||| |  |||||||||||||| |||||||||    
T  11088297 aaaaaacaactcttttaattattaatttaacaatttggtgtaccggtacactcaaatatttgggtgtaccatagaatttgcct 11088215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 84 - 165
Target Start/End: Complemental strand, 17821612 - 17821530
Alignment:
Q  84 aaaaataactcatttaactattaatttaaggatgtggtgtaccaatacactcaagt-tgttgggtgtaccatataatttgcct 165  Q
    |||||||| |||||||||||| ||||||| | | ||||||||||| |||||||| | |||||| |||||| || |||||||||    
T  17821612 aaaaataattcatttaactataaatttaaaggtctggtgtaccaagacactcaaatatgttggatgtaccgtagaatttgcct 17821530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 83 - 165
Target Start/End: Original strand, 25332956 - 25333038
Alignment:
Q  83 aaaaaataactcatttaactattaatttaaggatgtggtgtaccaatacactcaagttgttgggtgtaccatataatttgcct 165  Q
    |||||| ||||||||||| |||||||||||  || ||||||||   | |||| || ||||||||||||||||| |||||||||    
T  25332956 aaaaaacaactcatttaattattaatttaataatttggtgtactggtccacttaaattgttgggtgtaccataaaatttgcct 25333038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 70
Target Start/End: Original strand, 2859599 - 2859648
Alignment:
Q  21 gtttttggtaaataagatttagttattataattataggtgatagaaaata 70  Q
    ||||||||||||||||||||| |||||||||||||   ||||||||||||    
T  2859599 gtttttggtaaataagatttaattattataattattaatgatagaaaata 2859648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 166
Target Start/End: Original strand, 35896676 - 35896821
Alignment:
Q  22 tttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgt-gg 120  Q
    |||||| | ||||||||||||||||||||||||||  ||||| ||||||        |  ||||||| |||| |||||||||||||||||| | ||| ||    
T  35896676 tttttgatgaataagatttagttattataattataaatgataaaaaataatatttttcctcaaaaaacaacttatttaactattaatttaaag-tgtggg 35896774  T
Q  121 tgtaccaatacactcaagt-tgttgggtgtaccatataatttgccta 166  Q
    ||||||  ||||||||| | | ||| |||||||||| ||||||||||    
T  35896775 tgtaccggtacactcaaatatattgagtgtaccatagaatttgccta 35896821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 114
Target Start/End: Original strand, 37425484 - 37425570
Alignment:
Q  29 taaataagatttagttattataattataggtgatagaaaatannnnnnnc-ctacaaaaaataactcatttaactattaatttaagg 114  Q
    |||||||||||||||| |||||||| ||  ||||||||||||         || |||||||||||||||||||||||||||||||||    
T  37425484 taaataagatttagttgttataattgtaaatgatagaaaataattatttttcttcaaaaaataactcatttaactattaatttaagg 37425570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 82 - 118
Target Start/End: Original strand, 35310156 - 35310192
Alignment:
Q  82 caaaaaataactcatttaactattaatttaaggatgt 118  Q
    ||||||||||||||||||||||||||||||| |||||    
T  35310156 caaaaaataactcatttaactattaatttaaagatgt 35310192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 63
Target Start/End: Original strand, 43690285 - 43690325
Alignment:
Q  23 ttttggtaaataagatttagttattataattataggtgata 63  Q
    ||||||||||||| ||||| |||||||||||||||||||||    
T  43690285 ttttggtaaataaaatttaattattataattataggtgata 43690325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 90 - 161
Target Start/End: Complemental strand, 12071229 - 12071158
Alignment:
Q  90 aactcatttaactattaatttaaggatgtggtgtaccaatacactcaagttgttgggtgtaccatataattt 161  Q
    ||||| ||||| |||||||||||  || |  ||||||||||||||||| ||||||||| ||||||| |||||    
T  12071229 aactcgtttaattattaatttaataatttcatgtaccaatacactcaaattgttgggtataccatagaattt 12071158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 83 - 165
Target Start/End: Complemental strand, 33494012 - 33493929
Alignment:
Q  83 aaaaaataactcatttaactattaatttaaggatgtggtgtaccaatacactcaagt-tgttgggtgtaccatataatttgcct 165  Q
    |||||| || |||||||||||||||||||||| | | || |||| |||||||||| | ||||| ||||||| || |||||||||    
T  33494012 aaaaaaaaattcatttaactattaatttaagggttttgtctaccgatacactcaaatatgttgtgtgtaccgtagaatttgcct 33493929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 164
Target Start/End: Original strand, 1580566 - 1580648
Alignment:
Q  83 aaaaaataactcatttaactattaatttaaggatgtggtgtaccaatacactcaagt-tgttgggtgtaccatataatttgcc 164  Q
    |||||||||||||||||||| ||||||||| ||    |||||||  ||||||||| | | |||||||||||||| ||||||||    
T  1580566 aaaaaataactcatttaactgttaatttaaagagtaagtgtaccggtacactcaaatatattgggtgtaccatagaatttgcc 1580648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 165
Target Start/End: Original strand, 42641176 - 42641258
Alignment:
Q  83 aaaaaataactcatttaactattaatttaaggatgtggtgtaccaatacactcaagttgttgggtgtaccatataatttgcct 165  Q
    |||||| |||| |||||| ||||||||||| | | ||||| |||  |||||||||  | |||||||||||||| |||||||||    
T  42641176 aaaaaacaactaatttaattattaatttaaaggtttggtgcaccggtacactcaaaattttgggtgtaccatagaatttgcct 42641258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 95 - 164
Target Start/End: Complemental strand, 7069262 - 7069194
Alignment:
Q  95 atttaactattaatttaaggatgtggtgtaccaatacactcaagttgttgggtgtaccatataatttgcc 164  Q
    |||||| ||||||||||| | | |||||||||  |||||||||  |||||||||||||||| ||||||||    
T  7069262 atttaattattaatttaatgtt-tggtgtacccgtacactcaaaatgttgggtgtaccataaaatttgcc 7069194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 53
Target Start/End: Complemental strand, 12002495 - 12002462
Alignment:
Q  20 cgtttttggtaaataagatttagttattataatt 53  Q
    |||||||||||||||||||||| |||||||||||    
T  12002495 cgtttttggtaaataagatttaattattataatt 12002462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 29 - 70
Target Start/End: Original strand, 18259632 - 18259673
Alignment:
Q  29 taaataagatttagttattataattataggtgatagaaaata 70  Q
    ||||||||||||||||||||||||||||  ||||| ||||||    
T  18259632 taaataagatttagttattataattataaatgatataaaata 18259673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 112
Target Start/End: Complemental strand, 3261043 - 3261015
Alignment:
Q  84 aaaaataactcatttaactattaatttaa 112  Q
    |||||||||||||||||||||||||||||    
T  3261043 aaaaataactcatttaactattaatttaa 3261015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 70
Target Start/End: Complemental strand, 7366650 - 7366602
Alignment:
Q  22 tttttggtaaataagatttagttattataattataggtgatagaaaata 70  Q
    |||||||||||||||||||| ||||||||||| |   ||||||||||||    
T  7366650 tttttggtaaataagatttaattattataattgtcaatgatagaaaata 7366602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 151
Target Start/End: Original strand, 15426348 - 15426416
Alignment:
Q  83 aaaaaataactcatttaactattaatttaaggatgtggtgtaccaatacactcaagttgttgggtgtac 151  Q
    |||||| ||||| ||||| |||||||||||  || |||||||||  ||||||||| ||||||| |||||    
T  15426348 aaaaaacaactcgtttaattattaatttaataatttggtgtaccggtacactcaaattgttggatgtac 15426416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 166
Target Start/End: Complemental strand, 40533332 - 40533249
Alignment:
Q  83 aaaaaataactcatttaactattaatttaaggatgtggtgtaccaatacactcaagttg-ttgggtgtaccatataatttgccta 166  Q
    |||||| ||||||||||  ||||||||| | ||| ||||||||| |||||| ||| ||  |||||||||||||| ||||||||||    
T  40533332 aaaaaacaactcatttat-tattaattttacgatttggtgtaccgatacacccaaatttattgggtgtaccatagaatttgccta 40533249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 106; Significance: 3e-53; HSPs: 55)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 20 - 166
Target Start/End: Complemental strand, 30862933 - 30862787
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||| ||    
T  30862933 cgtttttggtaaataagatttagttattataattataggtgatagaaaataattttttcctacaaaaaataactcatttaactattaatttaaggatttg 30862834  T
Q  120 gtgtaccaatacactcaagttgttgggtgtaccatataatttgccta 166  Q
    ||||||||||||||| || ||||||||||||||||| || |||||||    
T  30862833 gtgtaccaatacacttaaattgttgggtgtaccatagaacttgccta 30862787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 20 - 166
Target Start/End: Original strand, 41913357 - 41913502
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||| |||||||||||||||||||||| ||    
T  41913357 cgtttttggtaaataagatttagttattataattataggtgatagaaaatatttttt-cctacaaaaaataacttatttaactattaatttaaggatttg 41913455  T
Q  120 gtgtaccaatacactcaagttgttgggtgtaccatataatttgccta 166  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||    
T  41913456 gtgtaccaatacactcaaattgttggatgtaccatataatttgccta 41913502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 20 - 164
Target Start/End: Complemental strand, 3910072 - 3909928
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||  ||  |    
T  3910072 cgtttttggtaaataagatttagttattataattataggtgatagaaaatattttttccctacaaaaaataactcatttaactattaatttaaaaattcg 3909973  T
Q  120 gtgtaccaatacactcaagttgttgggtgtaccatataatttgcc 164  Q
    |||||||||||||||||| ||||||||||||||||| ||||||||    
T  3909972 gtgtaccaatacactcaaattgttgggtgtaccatagaatttgcc 3909928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 21 - 164
Target Start/End: Original strand, 38129648 - 38129791
Alignment:
Q  21 gtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtgg 120  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||  || |||    
T  38129648 gtttttggtaaataagatttagttattataattataggtgatagaaaataattttttcctacaaaaaataactcatttaactattaatttaaaaatttgg 38129747  T
Q  121 tgtaccaatacactcaagttgttgggtgtaccatataatttgcc 164  Q
    ||||||||||||||||| || |||||| ||||||| || |||||    
T  38129748 tgtaccaatacactcaaattattgggtctaccatagaacttgcc 38129791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 20 - 162
Target Start/End: Complemental strand, 40942020 - 40941877
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnn-cctacaaaaaataactcatttaactattaatttaaggatgt 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||| ||| |    
T  40942020 cgtttttggtaaataagatttagttattataattataggtgatagaaaatattttttttcctacaaaaaataactcatttaactattaatttaaagattt 40941921  T
Q  119 ggtgtaccaatacactcaagttgttgggtgtaccatataatttg 162  Q
     |||||||||||||||||| |||||| |||||||||| ||||||    
T  40941920 tgtgtaccaatacactcaaattgttgagtgtaccatagaatttg 40941877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 20 - 171
Target Start/End: Complemental strand, 41381641 - 41381490
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||||||||        |||||||||||||||||||||||||||| ||||| ||| ||    
T  41381641 cgtttttggtagataagatttaattattataattataggtgatagaaaatattttttttctacaaaaaataactcatttaactattactttaaagatttg 41381542  T
Q  120 gtgtaccaatacactcaagttgttgggtgtaccatataatttgcctatcaaa 171  Q
     ||||||||||||||||| ||||| |||||||||||||||||||||| ||||    
T  41381541 atgtaccaatacactcaaattgtttggtgtaccatataatttgcctaacaaa 41381490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 20 - 161
Target Start/End: Original strand, 1691254 - 1691394
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||       ||||||||||||||||||||||||||||||||||||||| ||    
T  1691254 cgtttttggtaaataagatttagttattataattataggtgatagaaa-taattttttcctacaaaaaataactcatttaactattaatttaaggatttg 1691352  T
Q  120 gtgtaccaatacactcaagttgttgggtgtaccatataattt 161  Q
     ||||||||||||||||| | ||||| ||||||||| |||||    
T  1691353 atgtaccaatacactcaaatggttggatgtaccatagaattt 1691394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 21 - 165
Target Start/End: Original strand, 30623984 - 30624130
Alignment:
Q  21 gtttttggtaaataagatttagttattataattataggtgata--gaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgt 118  Q
    |||||||||||||||||||||||||||||||||||||||||||  |||||||       |||||||||||||||||||||||||||||||||||  || |    
T  30623984 gtttttggtaaataagatttagttattataattataggtgatatagaaaataattttttcctacaaaaaataactcatttaactattaatttaaaaattt 30624083  T
Q  119 ggtgtaccaatacactcaagttgttgggtgtaccatataatttgcct 165  Q
    ||||||||||||||||||| || |||||||||||||| || ||||||    
T  30624084 ggtgtaccaatacactcaaattattgggtgtaccatagaacttgcct 30624130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 20 - 167
Target Start/End: Complemental strand, 42711075 - 42710928
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||| || ||    
T  42711075 cgtttttggtaaaaaagatttagttattataattataggtgatagaaaatatttttttcctacaaaaaataactcatttaactattaatttaagaatttg 42710976  T
Q  120 gtgtaccaatacactcaagttgttgggtgtaccatataatttgcctat 167  Q
    |||||||||| |||| || || || | ||||||||| |||||||||||    
T  42710975 gtgtaccaatgcacttaaattattagatgtaccatagaatttgcctat 42710928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 28 - 177
Target Start/End: Complemental strand, 27956513 - 27956364
Alignment:
Q  28 gtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaattt-aaggatgtggtgtacc 126  Q
    |||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||| || ||| |||||||||    
T  27956513 gtaaataagatttagttattataattataggtgatagaaaatatttttt-cctacaaaaaataactcatttaactattaattttaaagatttggtgtacc 27956415  T
Q  127 aatacactcaagttgttgggtgtaccatataatttgcctatcaaattacca 177  Q
    |||| |||||| ||||| ||||||||||| |||||||| || | |||||||    
T  27956414 aatatactcaaattgttaggtgtaccatagaatttgccaataatattacca 27956364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 34 - 167
Target Start/End: Complemental strand, 28326811 - 28326678
Alignment:
Q  34 aagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtggtgtaccaatacac 133  Q
    ||||||||||||||||||||||||||||| |||||||       ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  28326811 aagatttagttattataattataggtgatggaaaatatttttttcctacaaaaaataactcatttaactattaatttaaggatttggtgtaccaatacac 28326712  T
Q  134 tcaagttgttgggtgtaccatataatttgcctat 167  Q
    |||| || |||| ||||| ||| ||||| |||||    
T  28326711 tcaaattattggatgtacgatagaatttacctat 28326678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 20 - 160
Target Start/End: Original strand, 21699554 - 21699691
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||  |         ||||||||||| |||||||||||||||||||||||||| ||    
T  21699554 cgtttttggtaaataagatttagttattataattataggtgatagaattttttttt---ctacaaaaaatgactcatttaactattaatttaaggatttg 21699650  T
Q  120 gtgtaccaatacactcaagttgttgggtgtaccatataatt 160  Q
    ||||||||||||||| || ||||||||||||||||| ||||    
T  21699651 gtgtaccaatacacttaaattgttgggtgtaccatagaatt 21699691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 21 - 166
Target Start/End: Original strand, 45857737 - 45857882
Alignment:
Q  21 gtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtgg 120  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||||| |        || ||||||||||| ||||||||||||||||||| ||| |||    
T  45857737 gtttttgataaataagatttaattattataattataggtgatagaaaacaatttttctcttcaaaaaataacacatttaactattaatttaatgatttgg 45857836  T
Q  121 tgtaccaatacactcaagttgttgggtgtaccatataatttgccta 166  Q
    ||||||||||||||||  |  |||||||||||||| ||||||||||    
T  45857837 tgtaccaatacactcatatctttgggtgtaccatagaatttgccta 45857882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 21 - 164
Target Start/End: Complemental strand, 18990234 - 18990091
Alignment:
Q  21 gtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtgg 120  Q
    ||||||||||||| | ||||| ||||||||||||||||||||| ||||||        || |||||||||||  |||||||||||||||||  ||| |||    
T  18990234 gtttttggtaaatgatatttaattattataattataggtgatataaaatattttttctcttcaaaaaataacatatttaactattaatttattgatttgg 18990135  T
Q  121 tgtaccaatacactcaagttgttgggtgtaccatataatttgcc 164  Q
    ||||||||||||||||| || || ||||||||||| ||||||||    
T  18990134 tgtaccaatacactcaaattttttggtgtaccatagaatttgcc 18990091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 78 - 164
Target Start/End: Complemental strand, 41331815 - 41331729
Alignment:
Q  78 cctacaaaaaataactcatttaactattaatttaaggatgtggtgtaccaatacactcaagttgttgggtgtaccatataatttgcc 164  Q
    |||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| ||||| ||||||||||| || |||||    
T  41331815 cctacaaaaaataactcatttaactattgatttaaggatttggtgtaccaatacactcaaattgttaggtgtaccataaaacttgcc 41331729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 21 - 161
Target Start/End: Original strand, 47748063 - 47748205
Alignment:
Q  21 gtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnnc--ctacaaaaaataactcatttaactattaatttaaggatgt 118  Q
    |||||||||||| |||||||||||||||||||||||||||||||| ||||          || ||||||||||||||||||||||||||||||||||  |    
T  47748063 gtttttggtaaaaaagatttagttattataattataggtgatagagaatattatttttttcttcaaaaaataactcatttaactattaatttaaggactt 47748162  T
Q  119 ggtgtaccaatacactcaagttgttgggtgtaccatataattt 161  Q
    ||| |||||||||| |||| || || ||||||||||| |||||    
T  47748163 ggtataccaatacattcaaatttttaggtgtaccataaaattt 47748205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 20 - 164
Target Start/End: Complemental strand, 11486140 - 11485996
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    |||||||| ||||||||||||  |||||||||||||| ||||||||||| |        || ||||||||||| ||||||||||||||||||| ||| ||    
T  11486140 cgtttttgataaataagatttgattattataattatatgtgatagaaaacaatttttctcttcaaaaaataacacatttaactattaatttaatgatttg 11486041  T
Q  120 gtgtaccaatacactcaagttgttgggtgtaccatataatttgcc 164  Q
    |||||||||||| || || |  |||||||||||||| ||||||||    
T  11486040 gtgtaccaatactcttaaatctttgggtgtaccatagaatttgcc 11485996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 20 - 164
Target Start/End: Original strand, 44964083 - 44964227
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    |||||||| ||||||||||||| ||||||||||||||||||||| ||||||        || ||||||| ||   |||||||||||||||||| ||| ||    
T  44964083 cgtttttgctaaataagatttaattattataattataggtgatataaaataatttttctcttcaaaaaacaaaatatttaactattaatttaatgatttg 44964182  T
Q  120 gtgtaccaatacactcaagttgttgggtgtaccatataatttgcc 164  Q
     ||||||||||||||||| |  || ||||||||||||||||||||    
T  44964183 ttgtaccaatacactcaaatctttaggtgtaccatataatttgcc 44964227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 21 - 164
Target Start/End: Complemental strand, 42975038 - 42974895
Alignment:
Q  21 gtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtgg 120  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||||| |        |  ||||||||||| |||||||||| |||||||| ||| |||    
T  42975038 gtttttgataaataagatttaattattataattataggtgatagaaaacaatttttctcatcaaaaaataacacatttaactactaatttaatgatttgg 42974939  T
Q  121 tgtaccaatacactcaagttgttgggtgtaccatataatttgcc 164  Q
    ||||||||| ||||||  |  |||||||||||||| ||||||||    
T  42974938 tgtaccaatgcactcatatgtttgggtgtaccatagaatttgcc 42974895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 21 - 161
Target Start/End: Original strand, 30936355 - 30936495
Alignment:
Q  21 gtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtgg 120  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||||| |        || |||||||| || ||||||||||||||||||| ||| | |    
T  30936355 gtttttgataaataagatttaattattataattataggtgatagaaaacaatttttctcttcaaaaaatcacacatttaactattaatttaatgattttg 30936454  T
Q  121 tgtaccaatacactcaagttgttgggtgtaccatataattt 161  Q
    ||||||||||||||||  |  ||||||||| |||| |||||    
T  30936455 tgtaccaatacactcatatctttgggtgtatcatagaattt 30936495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 20 - 160
Target Start/End: Complemental strand, 31482518 - 31482378
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||  |        || |||||| |||  |||||||||||||||| || ||| ||    
T  31482518 cgtttttggtaaataagatttaattattataattataggtgatagaaagcaatttttctcttcaaaaactaatacatttaactattaattcaatgatttg 31482419  T
Q  120 gtgtaccaatacactcaagttgttgggtgtaccatataatt 160  Q
    |||||||||||||||||| |  ||| |||||||||| ||||    
T  31482418 gtgtaccaatacactcaaatatttgagtgtaccatagaatt 31482378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 20 - 164
Target Start/End: Complemental strand, 43750219 - 43750075
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    |||||||||| ||||||||||| |||||||||||||||||||| | ||| |        || ||||||||||| |||||||||||||||||   |||  |    
T  43750219 cgtttttggttaataagatttaattattataattataggtgatgggaaaaaaattttctcttcaaaaaataacacatttaactattaatttgttgattgg 43750120  T
Q  120 gtgtaccaatacactcaagttgttgggtgtaccatataatttgcc 164  Q
    |||||||||||||||||| || ||| |||||||||| ||||||||    
T  43750119 gtgtaccaatacactcaaatttttgagtgtaccatagaatttgcc 43750075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 78 - 165
Target Start/End: Complemental strand, 23331788 - 23331699
Alignment:
Q  78 cctacaaaaaataactcatttaactatta--atttaaggatgtggtgtaccaatacactcaagttgttgggtgtaccatataatttgcct 165  Q
    |||||||||||||| ||||||||||||||  |||||||||| |||||||||||||||||||| |||||  |||||||||| |||||||||    
T  23331788 cctacaaaaaataattcatttaactattataatttaaggatttggtgtaccaatacactcaaattgttaagtgtaccatagaatttgcct 23331699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 20 - 165
Target Start/End: Complemental strand, 43069223 - 43069079
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnnc-ctacaaaaaataactcatttaactattaatttaaggatgt 118  Q
    |||||||| ||||||||||||| ||||||||||||||||||||| |||| |       | || ||||||||||| |||||  ||||||||||||  || |    
T  43069223 cgtttttgataaataagatttaattattataattataggtgataaaaaacaattttttctctccaaaaaataacacattt--ctattaatttaataattt 43069126  T
Q  119 ggtgtaccaatacactcaagttgttgggtgtaccatataatttgcct 165  Q
    |||||||||||||||||||||  || ||||||||||| |||||||||    
T  43069125 ggtgtaccaatacactcaagtctttaggtgtaccataaaatttgcct 43069079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 20 - 133
Target Start/End: Complemental strand, 30317339 - 30317226
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    |||||||||||||||| ||||| ||||||||||||||||||||| |||| |        || ||||||||||| ||||||||||||||||||  ||| ||    
T  30317339 cgtttttggtaaataaaatttaattattataattataggtgatataaaacaatttttctcttcaaaaaataacacatttaactattaatttattgatttg 30317240  T
Q  120 gtgtaccaatacac 133  Q
    ||||||||||||||    
T  30317239 gtgtaccaatacac 30317226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 21 - 137
Target Start/End: Complemental strand, 41809344 - 41809229
Alignment:
Q  21 gtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtgg 120  Q
    ||||||| ||||||||||||||||||||||||||||| |||||| ||| |        || ||||||||||  |||||||||| |||||||| ||| |||    
T  41809344 gtttttgataaataagatttagttattataattatagatgatag-aaacaatttttctcttcaaaaaataatacatttaactactaatttaatgatttgg 41809246  T
Q  121 tgtaccaatacactcaa 137  Q
    |||||||||||||||||    
T  41809245 tgtaccaatacactcaa 41809229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 20 - 137
Target Start/End: Original strand, 20439077 - 20439194
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    |||||||||| ||||||||||| ||||||||||||||| |||||||||| |        || ||||||||||| ||||||| |||||||||   |||  |    
T  20439077 cgtttttggttaataagatttaattattataattatagatgatagaaaacaatttttctcttcaaaaaataacacatttaattattaatttgttgattgg 20439176  T
Q  120 gtgtaccaatacactcaa 137  Q
    ||||||||||||||||||    
T  20439177 gtgtaccaatacactcaa 20439194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 96 - 163
Target Start/End: Original strand, 31903423 - 31903490
Alignment:
Q  96 tttaactattaatttaaggatgtggtgtaccaatacactcaagttgttgggtgtaccatataatttgc 163  Q
    ||||||||||||||||||||| || |||||||||||| |||| ||||||| |||| ||||||||||||    
T  31903423 tttaactattaatttaaggatttgatgtaccaatacattcaaattgttggatgtatcatataatttgc 31903490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 101 - 164
Target Start/End: Complemental strand, 45458761 - 45458698
Alignment:
Q  101 ctattaatttaaggatgtggtgtaccaatacactcaagttgttgggtgtaccatataatttgcc 164  Q
    |||||||||||||||| ||||||||||||||||| || |||||||||||| |||| ||||||||    
T  45458761 ctattaatttaaggatttggtgtaccaatacacttaaattgttgggtgtaacatagaatttgcc 45458698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 83 - 167
Target Start/End: Complemental strand, 1343100 - 1343016
Alignment:
Q  83 aaaaaataactcatttaactattaatttaaggatgtggtgtaccaatacactcaagttgttgggtgtaccatataatttgcctat 167  Q
    |||||| ||||| ||||| |||| ||||||  || |||||||||  ||||||||| ||||||||||||||||| |||||||||||    
T  1343100 aaaaaacaactcgtttaattattgatttaataatttggtgtaccggtacactcaaattgttgggtgtaccatagaatttgcctat 1343016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 161
Target Start/End: Complemental strand, 1806624 - 1806484
Alignment:
Q  22 tttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtggt 121  Q
    |||||| | ||||||||||||||||||||||||||  ||||| ||||||        || ||||||| |||| |||||||||||||||||| ||   |||    
T  1806624 tttttgatgaataagatttagttattataattataaatgataaaaaataatatttttcttcaaaaaacaacttatttaactattaatttaaagagtaggt 1806525  T
Q  122 gtaccaatacactcaagt-tgttgggtgtaccatataattt 161  Q
    |||||  ||||||||| | | ||| |||||||||| |||||    
T  1806524 gtaccggtacactcaaatatattgagtgtaccatagaattt 1806484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 82 - 160
Target Start/End: Complemental strand, 2290873 - 2290794
Alignment:
Q  82 caaaaaataactcatttaactattaatttaaggatgtggtgtaccaatacactcaagt-tgttgggtgtaccatataatt 160  Q
    ||||||| ||||||||||||||| ||||||||  | |||||||||  ||||||||| | |||||||||||||||| ||||    
T  2290873 caaaaaacaactcatttaactataaatttaagtgtttggtgtaccggtacactcaaatatgttgggtgtaccatagaatt 2290794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 164
Target Start/End: Original strand, 9682349 - 9682432
Alignment:
Q  81 acaaaaaataactcatttaactattaatttaaggatgtggtgtaccaatacactcaagttgttgggtgtaccatataatttgcc 164  Q
    |||||| | ||||||||||| ||||||||||| ||| |||||||||  ||||||||| || |||| || |||||| ||||||||    
T  9682349 acaaaacacaactcatttaattattaatttaatgatttggtgtaccggtacactcaaatttttggatgcaccataaaatttgcc 9682432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 165
Target Start/End: Complemental strand, 41311199 - 41311053
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaata--nnnnnnncctacaaaaaataactcatttaactattaatttaaggatg 117  Q
    |||||||||||||||||||||| |||||||||||||   ||||||||||||          || ||||||||||   |||||| |||||||||||  ||     
T  41311199 cgtttttggtaaataagatttaattattataattatcaatgatagaaaataattattttttcttcaaaaaataatcaatttaattattaatttaa-tatt 41311101  T
Q  118 tggtgtaccaatacactcaagttgttgggtgtaccatataatttgcct 165  Q
    |||||||||  |||||||||  ||||| |||||||||| |||||||||    
T  41311100 tggtgtaccggtacactcaaaatgttgagtgtaccatagaatttgcct 41311053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 83 - 137
Target Start/End: Complemental strand, 7527128 - 7527074
Alignment:
Q  83 aaaaaataactcatttaactattaatttaaggatgtggtgtaccaatacactcaa 137  Q
    |||||| ||||||||||||||||||||||||  | |||| |||||||||||||||    
T  7527128 aaaaaaaaactcatttaactattaatttaagagtttggtataccaatacactcaa 7527074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 83 - 165
Target Start/End: Original strand, 8159952 - 8160034
Alignment:
Q  83 aaaaaataactcatttaactattaatttaaggatgtggtgtaccaatacactcaagttgttgggtgtaccatataatttgcct 165  Q
    |||||||||||||||||| |||||| |||| ||| |||| ||||| ||||||||| | ||| | ||||| ||| |||||||||    
T  8159952 aaaaaataactcatttaattattaaattaaagatttggtataccagtacactcaaatagttagatgtactataaaatttgcct 8160034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 22 - 68
Target Start/End: Original strand, 8770634 - 8770680
Alignment:
Q  22 tttttggtaaataagatttagttattataattataggtgatagaaaa 68  Q
    |||||| ||||||||| ||| ||||||||||||||||||||||||||    
T  8770634 tttttgataaataagaattaattattataattataggtgatagaaaa 8770680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 167
Target Start/End: Original strand, 15584864 - 15584948
Alignment:
Q  83 aaaaaataactcatttaactattaatttaaggatgtggtgtaccaatacactcaagt-tgttgggtgtaccatataatttgcctat 167  Q
    |||||| ||||||||||||||| ||||||||||| | ||||| |  ||||||||| | ||||| |||||||||| |||||||||||    
T  15584864 aaaaaaaaactcatttaactataaatttaaggatttagtgta-cgttacactcaaatatgttgcgtgtaccataaaatttgcctat 15584948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 46836846 - 46836895
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaat 69  Q
    |||||||||||||||| ||||| ||||||||||| ||| |||||||||||    
T  46836846 cgtttttggtaaataaaatttaattattataattgtagatgatagaaaat 46836895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 132
Target Start/End: Original strand, 8770695 - 8770739
Alignment:
Q  88 ataactcatttaactattaatttaaggatgtggtgtaccaataca 132  Q
    ||||| ||||||||||||||||||| ||| |||||||||||||||    
T  8770695 ataacacatttaactattaatttaatgatttggtgtaccaataca 8770739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 165
Target Start/End: Original strand, 41968747 - 41968830
Alignment:
Q  83 aaaaaataactcatttaactattaatttaaggatgtg-gtgtaccaatacactcaagt-tgttgggtgtaccatataatttgcct 165  Q
    ||||||||||||||||||| |||||||||| || ||| ||||||| |||||||||| | | || ||||||||||| |||||||||    
T  41968747 aaaaaataactcatttaaccattaatttaaaga-gtgagtgtaccgatacactcaaatatattaggtgtaccatagaatttgcct 41968830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 83 - 164
Target Start/End: Original strand, 6791762 - 6791844
Alignment:
Q  83 aaaaaataactcatttaactattaatttaaggatgtg-gtgtaccaatacactcaagt-tgttgggtgtaccatataatttgcc 164  Q
    |||||| |||||||||||| |||||||||| || ||| ||||||| |||||||||| | | |||||||||||||| ||||||||    
T  6791762 aaaaaacaactcatttaaccattaatttaaaga-gtgagtgtaccgatacactcaaatatattgggtgtaccatagaatttgcc 6791844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 95 - 166
Target Start/End: Original strand, 40331396 - 40331466
Alignment:
Q  95 atttaactattaatttaaggatgtggtgtaccaatacactcaagttgttgggtgtaccatataatttgccta 166  Q
    |||||| ||||||||||| | | |||||||||  |||||||||  ||||| |||||||||||||||||||||    
T  40331396 atttaattattaatttaatgtt-tggtgtaccggtacactcaaaatgttgagtgtaccatataatttgccta 40331466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 164
Target Start/End: Complemental strand, 3061983 - 3061902
Alignment:
Q  83 aaaaaataactcatttaactattaatttaaggatgtggtgtaccaatacactcaagttg-ttgggtgtaccatataatttgcc 164  Q
    |||||||||||||||||  ||||||||| | ||  ||||||||| |||||| ||| ||  |||||||||||||||||||||||    
T  3061983 aaaaaataactcatttat-tattaattttacgacttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 3061902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 165
Target Start/End: Complemental strand, 13806443 - 13806361
Alignment:
Q  83 aaaaaataactcatttaactattaatttaaggatgtggtgtaccaatacactcaagttgttgggtgtaccatataatttgcct 165  Q
    |||||| ||||| ||||| |||||||||||  || ||||||| |  || |||||| || |||| |||||||||||||||||||    
T  13806443 aaaaaacaactcgtttaattattaatttaataatttggtgtatcggtatactcaaattattggatgtaccatataatttgcct 13806361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 157
Target Start/End: Original strand, 45232375 - 45232449
Alignment:
Q  84 aaaaataactcatttaactattaatttaaggatgtggtgtaccaatacactcaagt-tgttgggtgtaccatata 157  Q
    ||||| |||||||||||||||||| |||| ||   ||||||||| ||||||||| | | ||||||||||||||||    
T  45232375 aaaaaaaactcatttaactattaaattaaagaatgggtgtaccagtacactcaaatatattgggtgtaccatata 45232449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 31 - 68
Target Start/End: Original strand, 5583134 - 5583171
Alignment:
Q  31 aataagatttagttattataattataggtgatagaaaa 68  Q
    |||||||||||||||||||||||||| |||||| ||||    
T  5583134 aataagatttagttattataattataagtgataaaaaa 5583171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 95 - 164
Target Start/End: Complemental strand, 11640363 - 11640295
Alignment:
Q  95 atttaactattaatttaaggatgtggtgtaccaatacactcaagttgttgggtgtaccatataatttgcc 164  Q
    |||||| ||||||||||| | | |||||||||  |||||||||  |||||||||||||||| ||||||||    
T  11640363 atttaattattaatttaatgtt-tggtgtaccggtacactcaaaatgttgggtgtaccatagaatttgcc 11640295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 95 - 164
Target Start/End: Complemental strand, 12395262 - 12395194
Alignment:
Q  95 atttaactattaatttaaggatgtggtgtaccaatacactcaagttgttgggtgtaccatataatttgcc 164  Q
    |||||| ||||||||||| | | |||||||||  |||||||||  |||||||||||||||| ||||||||    
T  12395262 atttaattattaatttaacgtt-tggtgtaccggtacactcaaaatgttgggtgtaccataaaatttgcc 12395194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 53
Target Start/End: Complemental strand, 45442200 - 45442167
Alignment:
Q  20 cgtttttggtaaataagatttagttattataatt 53  Q
    |||||||||||||||||||||| |||||||||||    
T  45442200 cgtttttggtaaataagatttaattattataatt 45442167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 137
Target Start/End: Original strand, 428160 - 428211
Alignment:
Q  85 aaaataactcatttaactattaatttaaggatgtggtgtaccaatacactcaa 137  Q
    ||||||||||||| ||||||||||||||  ||| ||||||||| |||||||||    
T  428160 aaaataactcattaaactattaatttaaatatg-ggtgtaccagtacactcaa 428211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 165
Target Start/End: Complemental strand, 15715987 - 15715903
Alignment:
Q  82 caaaaaataactcatttaactattaatttaaggatgtggtgtaccaatacactcaagt-tgttgggtgtaccatataatttgcct 165  Q
    ||||||| ||||||||||||||| ||||||| ||   ||||||||  ||||||||| | |  ||||||||||||| |||||||||    
T  15715987 caaaaaacaactcatttaactatgaatttaaagagtgggtgtaccggtacactcaaatatagtgggtgtaccatagaatttgcct 15715903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 65
Target Start/End: Original strand, 23585837 - 23585881
Alignment:
Q  21 gtttttggtaaataagatttagttattataattataggtgataga 65  Q
    ||||||||||||||||||||| ||||||||| ||||  |||||||    
T  23585837 gtttttggtaaataagatttaattattataaatataaatgataga 23585881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 95 - 167
Target Start/End: Original strand, 25411964 - 25412035
Alignment:
Q  95 atttaactattaatttaaggatgtggtgtaccaatacactcaagttgttgggtgtaccatataatttgcctat 167  Q
    |||||| ||||||||||| | | |||||||||  |||||||||  |||||| ||||||||| |||||||||||    
T  25411964 atttaattattaatttaatgtt-tggtgtaccggtacactcaaaatgttggatgtaccatacaatttgcctat 25412035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 55
Target Start/End: Original strand, 35859349 - 35859381
Alignment:
Q  23 ttttggtaaataagatttagttattataattat 55  Q
    ||||||||||||||||||| |||||||||||||    
T  35859349 ttttggtaaataagatttaattattataattat 35859381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 106; Significance: 3e-53; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 20 - 166
Target Start/End: Original strand, 26358815 - 26358961
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||| | ||    
T  26358815 cgtttttggtaaataagatttagttattataattataggtgatagaaaataattttttcctacaaaaaataactcatttaactattaatttaagggtttg 26358914  T
Q  120 gtgtaccaatacactcaagttgttgggtgtaccatataatttgccta 166  Q
    |||||||||||||||||| ||||||||||||||||| || |||||||    
T  26358915 gtgtaccaatacactcaaattgttgggtgtaccatagaacttgccta 26358961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 20 - 165
Target Start/End: Complemental strand, 13390529 - 13390384
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||| ||    
T  13390529 cgtttttggtaaataagatttagttattataattataggtgatagaaaataattttttcctacaaaaaataactcatttaactattaatttaaggatttg 13390430  T
Q  120 gtgtaccaatacactcaagttgttgggtgtaccatataatttgcct 165  Q
    ||||||||||||||| || ||||||||||||||||| || ||||||    
T  13390429 gtgtaccaatacacttaaattgttgggtgtaccatagaacttgcct 13390384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 20 - 164
Target Start/End: Complemental strand, 6848654 - 6848510
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||| |     
T  6848654 cgtttttggtaaataagatttagttattataattataggtgatagaaaatatttttttcctacaaaaaataactcatttaactattaatttaaggatttt 6848555  T
Q  120 gtgtaccaatacactcaagttgttgggtgtaccatataatttgcc 164  Q
    || ||||||| ||||||| ||||||||||||||||| ||||||||    
T  6848554 gtataccaatgcactcaaattgttgggtgtaccatagaatttgcc 6848510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 20 - 166
Target Start/End: Original strand, 32834036 - 32834182
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||| |||||||||||||| ||| ||    
T  32834036 cgtttttggtaaataagatttagttattataattataggtgatagaaaataattttttcctacaaaaaataactcattgaactattaatttaatgatttg 32834135  T
Q  120 gtgtaccaatacactcaagttgttgggtgtaccatataatttgccta 166  Q
    |||||||||||||||||| || || ||||||||||| ||||||||||    
T  32834136 gtgtaccaatacactcaaattattaggtgtaccatagaatttgccta 32834182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 20 - 162
Target Start/End: Complemental strand, 17545748 - 17545607
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||| ||||||||||||||||||| || ||    
T  17545748 cgtttttggtaaataagatttagttattataattataggtgatagaaaatatttttt-cctacaaaaaataacttatttaactattaatttaagaatttg 17545650  T
Q  120 gtgtaccaatacactcaagttgttgggtgtaccatataatttg 162  Q
    |||||||||||||||||| ||||||||||||||||| ||||||    
T  17545649 gtgtaccaatacactcaaattgttgggtgtaccatagaatttg 17545607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 20 - 154
Target Start/End: Original strand, 24487549 - 24487683
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||       |||| |||||||||||||||||||||||||||||| ||| ||    
T  24487549 cgtttttggtaaataagatttagttattataattataggtgatggaaaatatttttttcctataaaaaataactcatttaactattaatttaaagatttg 24487648  T
Q  120 gtgtaccaatacactcaagttgttgggtgtaccat 154  Q
    |||||||||||||||||| ||||||||||||||||    
T  24487649 gtgtaccaatacactcaaattgttgggtgtaccat 24487683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 20 - 165
Target Start/End: Original strand, 8401679 - 8401823
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| ||       ||||||||||||||||||||||||||||||||||| ||| ||    
T  8401679 cgtttttggtaaataagatttagttattttaattataggtgatagaaa-taattttttcctacaaaaaataactcatttaactattaatttaaagatttg 8401777  T
Q  120 gtgtaccaatacactcaagttgttgggtgtaccatataatttgcct 165  Q
    |||||| ||||||||||| | ||||| |||||||||||||||||||    
T  8401778 gtgtacgaatacactcaaatggttggatgtaccatataatttgcct 8401823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 20 - 165
Target Start/End: Complemental strand, 24213055 - 24212911
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||       | |||||||||| |||||||||||||||||||||||||| |     
T  24213055 cgtttttggtaaataagatttagttattataattataggtgatagaaa-taattttttcttacaaaaaatcactcatttaactattaatttaaggattta 24212957  T
Q  120 gtgtaccaatacactcaagttgttgggtgtaccatataatttgcct 165  Q
    |||||||||||||||||| | ||||| ||||||||| |||||||||    
T  24212956 gtgtaccaatacactcaaatggttggatgtaccatagaatttgcct 24212911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 20 - 162
Target Start/End: Complemental strand, 2259048 - 2258905
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnn-cctacaaaaaataactcatttaactattaatttaaggatgt 118  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||  |         ||||||||||||||||||||||||||||||||||||||| |    
T  2259048 cgtttttgataaataagatttagttattataattataggtgatagaattttttttttttcctacaaaaaataactcatttaactattaatttaaggattt 2258949  T
Q  119 ggtgtaccaatacactcaagttgttgggtgtaccatataatttg 162  Q
     |||||||||||||||||| ||||||||||||||||| ||||||    
T  2258948 agtgtaccaatacactcaaattgttgggtgtaccatagaatttg 2258905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 28 - 166
Target Start/End: Complemental strand, 4110687 - 4110549
Alignment:
Q  28 gtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtggtgtacca 127  Q
    |||||||||||||||||||||||| ||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  4110687 gtaaataagatttagttattataactataggtgatagaaaataattttttcctacaaaaaataactcatttaactattaatttaaggatttagtgtacca 4110588  T
Q  128 atacactcaagttgttgggtgtaccatataatttgccta 166  Q
    ||| | | || || |||||||||||||| || |||||||    
T  4110587 atatatttaaattattgggtgtaccatagaacttgccta 4110549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 22 - 162
Target Start/End: Original strand, 4901215 - 4901353
Alignment:
Q  22 tttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtggt 121  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||       |||||||||| ||| |||||||||||||||||||||||| |  |    
T  4901215 tttttggtaaataagatttagttattataattataggtcatagaaaatatttttt-cctacaaaaa-taattcatttaactattaatttaaggatttaat 4901312  T
Q  122 gtaccaatacactcaagttgttgggtgtaccatataatttg 162  Q
    |||||||||||||||| ||||| | ||||||||| ||||||    
T  4901313 gtaccaatacactcaaattgttagatgtaccataaaatttg 4901353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 20 - 164
Target Start/End: Complemental strand, 11446880 - 11446736
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    |||||||| | ||||||||||| ||||||||||||||| |||||||||| |        || ||||||||||| ||||||||||||||||||  ||| ||    
T  11446880 cgtttttgatgaataagatttaattattataattatagatgatagaaaacaatttttctcttcaaaaaataacacatttaactattaatttattgatttg 11446781  T
Q  120 gtgtaccaatacactcaagttgttgggtgtaccatataatttgcc 164  Q
    |||||||||||||||||  |  |||||||||||||| ||||||||    
T  11446780 gtgtaccaatacactcatatctttgggtgtaccatagaatttgcc 11446736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 21 - 166
Target Start/End: Original strand, 15383467 - 15383612
Alignment:
Q  21 gtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtgg 120  Q
    ||||||| ||||||||||||| ||||| |||||||| | |||||||||||        || |||||||||||  ||||||||| |||||||  ||| |||    
T  15383467 gtttttgataaataagatttaattattgtaattataagcgatagaaaataatttttctcttcaaaaaataacatatttaactaataatttactgatttgg 15383566  T
Q  121 tgtaccaatacactcaagttgttgggtgtaccatataatttgccta 166  Q
    | ||||||||||||||| || |||| ||||||||||||||||||||    
T  15383567 tataccaatacactcaaatttttggatgtaccatataatttgccta 15383612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 22 - 166
Target Start/End: Original strand, 34196073 - 34196217
Alignment:
Q  22 tttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtggt 121  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||||        ||  ||||||||||  |||||||||||||||||  ||| || |    
T  34196073 tttttgataaataagatttaattattataattataggtgatagaaaataatttttctcttaaaaaaataacatatttaactattaatttattgatttgat 34196172  T
Q  122 gtaccaatacactcaagttgttgggtgtaccatataatttgccta 166  Q
      | |||||||||||| || ||| |||||||||| ||||||||||    
T  34196173 taatcaatacactcaaatttttgagtgtaccataaaatttgccta 34196217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 20 - 166
Target Start/End: Original strand, 30020620 - 30020766
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    |||||||| |||||||||||||  ||||||||||||||||||||||||  |        || ||||||||||| ||||||||||||||||||  ||| ||    
T  30020620 cgtttttgataaataagatttaaatattataattataggtgatagaaagcaatttttctcttcaaaaaataacacatttaactattaatttattgatttg 30020719  T
Q  120 gtgtaccaatacactcaagttgttgggtgtaccatataatttgccta 166  Q
    || || ||||||||||||  | |||| ||||||||| ||||| ||||    
T  30020720 gtatatcaatacactcaaacttttggatgtaccatagaatttaccta 30020766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 20 - 132
Target Start/End: Complemental strand, 17010505 - 17010393
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    |||||||||||||||||||||| ||||||||||||||||||||| |||| |        || ||||||||||| ||||||||||||||||||  ||  ||    
T  17010505 cgtttttggtaaataagatttaattattataattataggtgatataaaacaatttttctcttcaaaaaataacacatttaactattaatttattgaattg 17010406  T
Q  120 gtgtaccaataca 132  Q
    |||||| ||||||    
T  17010405 gtgtactaataca 17010393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 79 - 165
Target Start/End: Complemental strand, 1096306 - 1096220
Alignment:
Q  79 ctacaaaaaataactcatttaactattaatttaaggatgtggtgtaccaatacactcaagttgttgggtgtaccatataatttgcct 165  Q
    |||||||||||||||||||||||||||||||||| ||| | ||||||||||||| | ||  | |||||||||||||| || ||||||    
T  1096306 ctacaaaaaataactcatttaactattaatttaaagatttagtgtaccaatacaataaaaatattgggtgtaccatagaacttgcct 1096220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 163
Target Start/End: Original strand, 8376286 - 8376429
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    |||||||| ||||||||||||| ||||||||||||||| | |||||||| |        || ||||||||||| |||||||||| |||||||  ||  ||    
T  8376286 cgtttttgataaataagatttaattattataattatagataatagaaaacaatttttctcttcaaaaaataacacatttaactaataatttattgacttg 8376385  T
Q  120 gtgtaccaatacactcaagttgttgggtgtaccatataatttgc 163  Q
    ||||||||||||| |||| ||  | | ||||||||| |||||||    
T  8376386 gtgtaccaatacattcaaatttgtagatgtaccataaaatttgc 8376429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 164
Target Start/End: Original strand, 8549827 - 8549961
Alignment:
Q  31 aataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg-gtgtaccaat 129  Q
    |||||||||||||||||| || ||||  ||||||||||||        || |||||||||||||||||||| |||||||||| || ||| ||||||| ||    
T  8549827 aataagatttagttattacaaatataaatgatagaaaataatatttttcttcaaaaaataactcatttaaccattaatttaaaga-gtgagtgtaccgat 8549925  T
Q  130 acactcaagt-tgttgggtgtaccatataatttgcc 164  Q
    |||||||| | | |||||||||||||| ||||||||    
T  8549926 acactcaaatatattgggtgtaccatagaatttgcc 8549961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 82 - 163
Target Start/End: Complemental strand, 13719194 - 13719112
Alignment:
Q  82 caaaaaataactcatttaactattaatttaaggatgtggtgtaccaatacactcaagt-tgttgggtgtaccatataatttgc 163  Q
    ||||||||||||||||||||||| ||||||||||| | |||||||  ||||||||| | ||||||||||||| || |||||||    
T  13719194 caaaaaataactcatttaactataaatttaaggatctagtgtaccggtacactcaaatatgttgggtgtaccgtagaatttgc 13719112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 31 - 164
Target Start/End: Complemental strand, 4509564 - 4509430
Alignment:
Q  31 aataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtggtgtaccaata 130  Q
    ||||||||||||||||||||||||||  ||||| ||||||        || |||||||||||| |||||||||||||||||| ||   ||||||||  ||    
T  4509564 aataagatttagttattataattataaatgataaaaaataatatttttcttcaaaaaataacttatttaactattaatttaaagagtgggtgtaccggta 4509465  T
Q  131 cactcaagt-tgttgggtgtaccatataatttgcc 164  Q
    ||||||| | | || ||||||||||| ||||||||    
T  4509464 cactcaaatatattaggtgtaccatagaatttgcc 4509430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 31 - 165
Target Start/End: Original strand, 243159 - 243294
Alignment:
Q  31 aataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaagga-tgtggtgtaccaat 129  Q
    ||||||||||||||||||||||||||  ||||| ||||||        || ||||||| ||||||||||||||||||||||| || |||| ||||||  |    
T  243159 aataagatttagttattataattataaatgataaaaaataatatttttcttcaaaaaacaactcatttaactattaatttaaagaatgtg-tgtaccggt 243257  T
Q  130 acactcaagt-tgttgggtgtaccatataatttgcct 165  Q
     ||||||| | | |||| |||||||||||||||||||    
T  243258 gcactcaaatatattggatgtaccatataatttgcct 243294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 83 - 164
Target Start/End: Original strand, 7344641 - 7344722
Alignment:
Q  83 aaaaaataactcatttaactattaatttaaggatgtggtgtaccaatacactcaagttgttgggtgtaccatataatttgcc 164  Q
    |||||| ||||| ||||| |||| ||||||  || |||||||||  ||||||||| ||||||||||||||||| ||||||||    
T  7344641 aaaaaacaactcgtttaattatttatttaataatttggtgtaccggtacactcaaattgttgggtgtaccatagaatttgcc 7344722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 83 - 164
Target Start/End: Original strand, 10888135 - 10888216
Alignment:
Q  83 aaaaaataactcatttaactattaatttaaggatgtggtgtaccaatacactcaagttgttgggtgtaccatataatttgcc 164  Q
    |||||| ||||| || || |||||||||||  || || ||||||| ||||||||| ||||||| ||||||||||||||||||    
T  10888135 aaaaaacaactcgttcaattattaatttaataatttgatgtaccagtacactcaaattgttggatgtaccatataatttgcc 10888216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 82 - 166
Target Start/End: Original strand, 6265258 - 6265342
Alignment:
Q  82 caaaaaataactcatttaactattaatttaaggatgtggtgtaccaatacactcaagttgttgggtgtaccatataatttgccta 166  Q
    ||||||||||| |||| |||||||||||||  ||| ||| ||| |||||||||||| || || | ||||||||| ||||||||||    
T  6265258 caaaaaataacacattaaactattaatttattgatttggggtatcaatacactcaaatttttagatgtaccatagaatttgccta 6265342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 82 - 164
Target Start/End: Complemental strand, 9661835 - 9661752
Alignment:
Q  82 caaaaaataactcatttaactattaatttaaggatgtggtgtaccaatacactcaagt-tgttgggtgtaccatataatttgcc 164  Q
    ||||||| ||||||||||||||||||||||| ||   ||||||||  ||||||||| | | |||||||||||||| ||||||||    
T  9661835 caaaaaacaactcatttaactattaatttaaagaatgggtgtaccggtacactcaaatatattgggtgtaccatagaatttgcc 9661752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 31 - 164
Target Start/End: Complemental strand, 22755375 - 22755241
Alignment:
Q  31 aataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtggtgtaccaata 130  Q
    |||||||||||||||||||||||||| |||||| |||| |        || ||||||| ||||||||||  ||||||||||| || |  |||||||  ||    
T  22755375 aataagatttagttattataattataagtgataaaaaaaaatatttttcttcaaaaaacaactcatttagttattaatttaaagaaggagtgtaccggta 22755276  T
Q  131 cactcaagt-tgttgggtgtaccatataatttgcc 164  Q
    ||||||| | | ||||||||| |||| ||||||||    
T  22755275 cactcaaatatattgggtgtatcatagaatttgcc 22755241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 166
Target Start/End: Original strand, 14872686 - 14872734
Alignment:
Q  118 tggtgtaccaatacactcaagttgttgggtgtaccatataatttgccta 166  Q
    |||||||||  |||||||||| |||||||||||||||| ||||||||||    
T  14872686 tggtgtaccggtacactcaagatgttgggtgtaccatagaatttgccta 14872734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 31 - 165
Target Start/End: Complemental strand, 9686910 - 9686775
Alignment:
Q  31 aataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg-gtgtaccaat 129  Q
    ||||||||||||||||||||| ||||  ||||||||||||       ||| ||||||  ||||||||||||  ||||||||| || ||| ||||||  ||    
T  9686910 aataagatttagttattataaatataaatgatagaaaataatattttccttcaaaaagcaactcatttaaccgttaatttaaaga-gtgagtgtactgat 9686812  T
Q  130 acactcaagt-tgttgggtgtaccatataatttgcct 165  Q
    |||||||| | | ||| |||||||||| |||||||||    
T  9686811 acactcaaatatattgagtgtaccatagaatttgcct 9686775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 95 - 166
Target Start/End: Complemental strand, 14501094 - 14501024
Alignment:
Q  95 atttaactattaatttaaggatgtggtgtaccaatacactcaagttgttgggtgtaccatataatttgccta 166  Q
    |||||| ||||||||||| | | |||||||||  |||||||||  |||||| ||||||||||||||||||||    
T  14501094 atttaattattaatttaacgtt-tggtgtaccggtacactcaaaatgttggatgtaccatataatttgccta 14501024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 161
Target Start/End: Original strand, 6975025 - 6975103
Alignment:
Q  83 aaaaaataactcatttaactattaatttaaggatgtggtgtaccaatacactcaagttgttgggtgtaccatataattt 161  Q
    |||||| ||||||||||| |||||||||||  || |||| ||||   |||||||| || |||||||||||||| |||||    
T  6975025 aaaaaacaactcatttaattattaatttaacaatttggtataccggcacactcaaatttttgggtgtaccatagaattt 6975103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 161
Target Start/End: Complemental strand, 35037636 - 35037559
Alignment:
Q  83 aaaaaataactcatttaactattaatttaaggatgtggtgtaccaatacactcaagttgttgggtgtaccatataattt 161  Q
    |||||| |||||||||||||||||||||||| || || |||| || | ||||||| || ||| |||||||||| |||||    
T  35037636 aaaaaacaactcatttaactattaatttaagtatttgttgtatcagtgcactcaa-ttattgagtgtaccatagaattt 35037559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 105; Significance: 1e-52; HSPs: 57)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 22 - 167
Target Start/End: Complemental strand, 6532721 - 6532576
Alignment:
Q  22 tttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtggt 121  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||| || ||||    
T  6532721 tttttggtaaataagatttagttattataattataggtgatagaaaataattttttcctacaaaaaataactcatttaactattaatttaagaatttggt 6532622  T
Q  122 gtaccaatacactcaagttgttgggtgtaccatataatttgcctat 167  Q
    ||||||||||||| || ||||||||||||||||| |||||||||||    
T  6532621 gtaccaatacacttaaattgttgggtgtaccatagaatttgcctat 6532576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 20 - 165
Target Start/End: Original strand, 1661956 - 1662101
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||| ||||||||||||||||||||||| |     
T  1661956 cgtttttggtaaataagatttagttattataattataggtgatagaaaataattttttcctacaaaaaataacccatttaactattaatttaaggatttt 1662055  T
Q  120 gtgtaccaatacactcaagttgttgggtgtaccatataatttgcct 165  Q
    |||||||||||||||||| ||||||||||||||||| || ||||||    
T  1662056 gtgtaccaatacactcaaattgttgggtgtaccatagaacttgcct 1662101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 20 - 162
Target Start/End: Complemental strand, 21605792 - 21605650
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||       |||| |||||||||||||||||||||||||||||| ||| ||    
T  21605792 cgtttttggtaaataagatttagttattataattataggtgatggaaaatatttttttcctataaaaaataactcatttaactattaatttaaagatttg 21605693  T
Q  120 gtgtaccaatacactcaagttgttgggtgtaccatataatttg 162  Q
    |||||||||||||||||| ||||||||||||||||| ||||||    
T  21605692 gtgtaccaatacactcaaattgttgggtgtaccatagaatttg 21605650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 20 - 165
Target Start/End: Original strand, 6114036 - 6114181
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||        |||||||||||||||||||||||||||||||||||||| ||    
T  6114036 cgtttttggtaaataagatttagttattataattataggtgatggaaaatattttttttctacaaaaaataactcatttaactattaatttaaggatttg 6114135  T
Q  120 gtgtaccaatacactcaagttgttgggtgtaccatataatttgcct 165  Q
    ||| |||||||||||||| ||||||| ||||||||| |||||||||    
T  6114136 gtggaccaatacactcaaattgttggatgtaccatagaatttgcct 6114181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 20 - 164
Target Start/End: Complemental strand, 2029497 - 2029353
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||| ||    
T  2029497 cgtttttggtaaataagatttagttattataattataggtgatagaaaataattttttcctacaaaaaataactcatttaactattaatttaaggatttg 2029398  T
Q  120 gtgtaccaatacactcaagttgttgggtgtaccatataatttgcc 164  Q
    ||||||||||||||| || ||||| | ||||||||  ||||||||    
T  2029397 gtgtaccaatacacttaaattgttagatgtaccatggaatttgcc 2029353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 21 - 165
Target Start/End: Complemental strand, 2141385 - 2141241
Alignment:
Q  21 gtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtgg 120  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||| || |||    
T  2141385 gtttttggtaaataagatttagttattataattataggtgatagaaaataattttttcctacaaaaaataactcatttaactattaatttaagaatttgg 2141286  T
Q  121 tgtaccaatacactcaagttgttgggtgtaccatataatttgcct 165  Q
    ||||||||||||||||| || |||||| ||||||| || ||||||    
T  2141285 tgtaccaatacactcaaattattgggtctaccataaaacttgcct 2141241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 20 - 155
Target Start/End: Complemental strand, 3056529 - 3056394
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||  || ||    
T  3056529 cgtttttggtaaataagatttagttattataattataggtgatagaaaataattttttcctacaaaaaataactcatttaactattaatttaaaaatttg 3056430  T
Q  120 gtgtaccaatacactcaagttgttgggtgtaccata 155  Q
    ||||||||||||||| || |||||||||||||||||    
T  3056429 gtgtaccaatacacttaaattgttgggtgtaccata 3056394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 23 - 164
Target Start/End: Original strand, 43237618 - 43237759
Alignment:
Q  23 ttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtggtg 122  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||       |||||||||||||||||||||||||||||||||||| || |||||    
T  43237618 ttttggtgaataagatttagttattataatcataggtgatagaaaatatttttttcctacaaaaaataactcatttaactattaatttaagaatttggtg 43237717  T
Q  123 taccaatacactcaagttgttgggtgtaccatataatttgcc 164  Q
    ||||||||||||||| || |||||||||||||| ||||||||    
T  43237718 taccaatacactcaaattattgggtgtaccatagaatttgcc 43237759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 31 - 162
Target Start/End: Complemental strand, 6560959 - 6560828
Alignment:
Q  31 aataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtggtgtaccaata 130  Q
    |||||||||||||||||||||| |||||||||||||||||       ||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  6560959 aataagatttagttattataatcataggtgatagaaaataattttttcctacaaaaaataactcatttaactattaatttaaggatttggtgtaccaata 6560860  T
Q  131 cactcaagttgttgggtgtaccatataatttg 162  Q
    ||||||| || |||||||||||||| ||||||    
T  6560859 cactcaaattattgggtgtaccatagaatttg 6560828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 20 - 155
Target Start/End: Original strand, 18228721 - 18228856
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||       || |||||||||||||||||||||||||||||||||||| ||    
T  18228721 cgtttttggtaaataagatttagttattataattacaggtgatagaaaataattttttcccacaaaaaataactcatttaactattaatttaaggatttg 18228820  T
Q  120 gtgtaccaatacactcaagttgttgggtgtaccata 155  Q
    || ||||||||||||||| ||||| |||||||||||    
T  18228821 gtataccaatacactcaaattgttaggtgtaccata 18228856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 20 - 164
Target Start/End: Complemental strand, 42917262 - 42917117
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnnc-ctacaaaaaataactcatttaactattaatttaaggatgt 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||         ||||||||| ||||||||||||||||||||||||| || |    
T  42917262 cgtttttggtaaataagatttagttattataattataggtgatagaaaatatatttttttctacaaaaagtaactcatttaactattaatttaagaattt 42917163  T
Q  119 ggtgtaccaatacactcaagttgttgggtgtaccatataatttgcc 164  Q
    ||||||||||||||||||| |||||||||| |||||| ||||||||    
T  42917162 ggtgtaccaatacactcaaattgttgggtgcaccatagaatttgcc 42917117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 22 - 161
Target Start/End: Complemental strand, 13410683 - 13410545
Alignment:
Q  22 tttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtggt 121  Q
    ||||||||| ||||||||||||||||||||||||||||||| |||||||       |||||||||||||||||||||||||||||||||||| || ||||    
T  13410683 tttttggtagataagatttagttattataattataggtgatggaaaatatttttt-cctacaaaaaataactcatttaactattaatttaagaatttggt 13410585  T
Q  122 gtaccaatacactcaagttgttgggtgtaccatataattt 161  Q
    |||||||||||||||| ||||||| ||||||||| |||||    
T  13410584 gtaccaatacactcaaattgttggatgtaccataaaattt 13410545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 20 - 162
Target Start/End: Complemental strand, 24098015 - 24097873
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||| ||||||||||||||  || ||    
T  24098015 cgtttttggtaaataagatttagttattataattataggtgatagaaaataattttttcctacaaaaaataactcattgaactattaatttaataatttg 24097916  T
Q  120 gtgtaccaatacactcaagttgttgggtgtaccatataatttg 162  Q
    |||||||| ||||||||| |  |||||| ||||||| ||||||    
T  24097915 gtgtaccattacactcaaatgattgggtttaccatagaatttg 24097873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 20 - 161
Target Start/End: Complemental strand, 32467187 - 32467046
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||| ||||| |||||||||||||| ||| ||    
T  32467187 cgtttttggtaaataagatttagttattataattataggtgatagaaaataattttttcctacaaaaaataattcattgaactattaatttaatgatttg 32467088  T
Q  120 gtgtaccaatacactcaagttgttgggtgtaccatataattt 161  Q
     |||||||||||||| || |  ||| ||||||||||||||||    
T  32467087 atgtaccaatacacttaaatgattgagtgtaccatataattt 32467046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 23 - 165
Target Start/End: Complemental strand, 34302789 - 34302645
Alignment:
Q  23 ttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctac--aaaaaataactcatttaactattaatttaaggatgtgg 120  Q
    ||||||| |||||||||||||||||||||| |||||||||| ||||||       |||||  |||||||||||||||||||||||||||||||||| ||     
T  34302789 ttttggtgaataagatttagttattataatcataggtgataaaaaataattttttcctacaaaaaaaataactcatttaactattaatttaaggatttga 34302690  T
Q  121 tgtaccaatacactcaagttgttgggtgtaccatataatttgcct 165  Q
    ||||||||||||||||| || |||||||||||||| |||||||||    
T  34302689 tgtaccaatacactcaaattattgggtgtaccatagaatttgcct 34302645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 21 - 165
Target Start/End: Complemental strand, 2414067 - 2413926
Alignment:
Q  21 gtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtgg 120  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||       ||||   ||||||||||||||||||||||||||||| || |||    
T  2414067 gtttttggtaaataagatttagttattataattataggtgatagaaaataattttttccta---aaaataactcatttaactattaatttaagaatttgg 2413971  T
Q  121 tgtaccaatacactcaagttgttgggtgtaccatataatttgcct 165  Q
    ||||||||||||||||| || ||| || ||||||| || ||||||    
T  2413970 tgtaccaatacactcaaattattgagtctaccatagaacttgcct 2413926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 21 - 164
Target Start/End: Complemental strand, 9535010 - 9534870
Alignment:
Q  21 gtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtgg 120  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||       |||   |||||||||||||||||||||||||||||| || |||    
T  9535010 gtttttggtaaataagatttagttattataattataggtgatagaaaataattttttcct---aaaaataactcatttaactattaatttaagaatttgg 9534914  T
Q  121 tgtaccaatacactcaagttgttgggtgtaccatataatttgcc 164  Q
    ||||||||||||||||| || ||| || ||||||| || |||||    
T  9534913 tgtaccaatacactcaaattattgagtctaccatagaacttgcc 9534870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 21 - 165
Target Start/End: Original strand, 4617975 - 4618119
Alignment:
Q  21 gtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtgg 120  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||||||        || |||||||||||  |||||||||||||||||  ||| |||    
T  4617975 gtttttgataaataagatttaattattataattataggtgatagaaaataatttttctcttcaaaaaataacatatttaactattaatttattgatttgg 4618074  T
Q  121 tgtaccaatacactcaagttgttgggtgtaccatataatttgcct 165  Q
    ||||||||||||||||| || || ||||||||||| |||||||||    
T  4618075 tgtaccaatacactcaaatttttaggtgtaccataaaatttgcct 4618119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 20 - 167
Target Start/End: Complemental strand, 29744040 - 29743892
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaattt-aaggatgt 118  Q
    ||||||||| |||||||||||||||||||||||| ||||||||||||||||        || ||||||||||| ||||||||| ||||||| |||||| |    
T  29744040 cgtttttggcaaataagatttagttattataattttaggtgatagaaaataatttttttcttcaaaaaataacacatttaactcttaattttaaggattt 29743941  T
Q  119 ggtgtaccaatacactcaagttgttgggtgtaccatataatttgcctat 167  Q
    |||||||||||||||| || || |||  |||||||||||||||||||||    
T  29743940 ggtgtaccaatacacttaaatttttgaatgtaccatataatttgcctat 29743892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 20 - 152
Target Start/End: Original strand, 36752471 - 36752604
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaa-aataactcatttaactattaatttaaggatgt 118  Q
    |||||||||||||||| |||||||||||||||||||||||||| |||||||       ||||||||| ||||| |||||||||||||||||||||||| |    
T  36752471 cgtttttggtaaataaaatttagttattataattataggtgatggaaaatatttttttcctacaaaataataattcatttaactattaatttaaggattt 36752570  T
Q  119 ggtgtaccaatacactcaagttgttgggtgtacc 152  Q
     || ||||| ||||||||| ||||||| ||||||    
T  36752571 tgtataccactacactcaaattgttggatgtacc 36752604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 21 - 165
Target Start/End: Complemental strand, 9589352 - 9589208
Alignment:
Q  21 gtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtgg 120  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||||||        || |||||||||||  |||||||||||||||||| ||| |||    
T  9589352 gtttttgataaataagatttaattattataattataggtgatagaaaataatttttttcttcaaaaaataacatatttaactattaatttaatgatttgg 9589253  T
Q  121 tgtaccaatacactcaagttgttgggtgtaccatataatttgcct 165  Q
    ||| ||||||||||||  |  |||||||||||||| |||||||||    
T  9589252 tgtgccaatacactcatatctttgggtgtaccatagaatttgcct 9589208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 21 - 167
Target Start/End: Complemental strand, 13091057 - 13090911
Alignment:
Q  21 gtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtgg 120  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||||| |        || ||||||||||| |||||||||||||||||||  || |||    
T  13091057 gtttttgataaataagatttaattattataattataggtgatagaaaacaatttttctcttcaaaaaataacacatttaactattaatttaataatttgg 13090958  T
Q  121 tgtaccaatacactcaagttgttgggtgtaccatataatttgcctat 167  Q
    ||||||||||||||||  |  |||||||||||||| ||||| |||||    
T  13090957 tgtaccaatacactcatatctttgggtgtaccatagaatttacctat 13090911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 22 - 162
Target Start/End: Original strand, 35817612 - 35817752
Alignment:
Q  22 tttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtggt 121  Q
    |||||||| |||||||||| ||||| |||| ||||||||||||||||||        || |||||||||||||||||||||||||||||||   | ||||    
T  35817612 tttttggtgaataagattttgttatcataactataggtgatagaaaataatttttttcttcaaaaaataactcatttaactattaatttaaaattttggt 35817711  T
Q  122 gtaccaatacactcaagttgttgggtgtaccatataatttg 162  Q
    ||| |||||||||||| || |||| |||||||| |||||||    
T  35817712 gtatcaatacactcaaatttttggatgtaccatttaatttg 35817752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 22 - 165
Target Start/End: Complemental strand, 41802248 - 41802105
Alignment:
Q  22 tttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtggt 121  Q
    |||||| ||||||||||||| ||||||||||||||| ||||||||||||        || |||||||||||  |||||||||||||||||| ||| ||||    
T  41802248 tttttgataaataagatttaattattataattatagatgatagaaaataatttttctcttcaaaaaataacatatttaactattaatttaatgatttggt 41802149  T
Q  122 gtaccaatacactcaagttgttgggtgtaccatataatttgcct 165  Q
    |||||||||||||| |    ||||||||||| || |||||||||    
T  41802148 gtaccaatacactcgaacctttgggtgtaccgtaaaatttgcct 41802105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 21 - 171
Target Start/End: Complemental strand, 14967375 - 14967225
Alignment:
Q  21 gtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtgg 120  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||||| |        ||  |||||||||| |||||||||| |||||||| ||| | |    
T  14967375 gtttttgataaataagatttaattattataattataggtgatagaaaacaatttttctctttaaaaaataacacatttaactactaatttaatgatttag 14967276  T
Q  121 tgtaccaatacactcaagttgttgggtgtaccatataatttgcctatcaaa 171  Q
    ||||||||||||||||  |  |||||||||||||| ||||| |||| ||||    
T  14967275 tgtaccaatacactcatatctttgggtgtaccatagaattttcctaacaaa 14967225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 20 - 164
Target Start/End: Complemental strand, 28332265 - 28332120
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    |||||||||| ||||||||||| |||||||||||||||||||| ||||| |        || ||||||||||| |||||||||||||||||   ||| ||    
T  28332265 cgtttttggttaataagatttaattattataattataggtgatggaaaacaatttttctcttcaaaaaataacacatttaactattaatttgttgatttg 28332166  T
Q  120 gtgtaccaatacactc-aagttgttgggtgtaccatataatttgcc 164  Q
    |||||||||||||||| || || ||| |||||||||| ||||||||    
T  28332165 gtgtaccaatacactcaaattttttgagtgtaccatagaatttgcc 28332120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 20 - 164
Target Start/End: Original strand, 12362620 - 12362764
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    |||||||||| ||||||||||| |||||||||||||||||||| ||||| |        || ||||||||||  ||||||||||||||||||  |||  |    
T  12362620 cgtttttggttaataagatttaattattataattataggtgatggaaaacaatttttctcttcaaaaaataagacatttaactattaatttattgattgg 12362719  T
Q  120 gtgtaccaatacactcaagttgttgggtgtaccatataatttgcc 164  Q
    ||||||||||||||| || || ||| |||||||||| ||||||||    
T  12362720 gtgtaccaatacacttaaatttttgagtgtaccatagaatttgcc 12362764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 20 - 164
Target Start/End: Original strand, 21051566 - 21051710
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    ||||||||||||||||||||||||||| | |||||||||||||||| || |        || ||||||||||| ||||||||||||||||||  ||| ||    
T  21051566 cgtttttggtaaataagatttagttatcacaattataggtgatagacaacaatttttctcttcaaaaaataacacatttaactattaatttattgatttg 21051665  T
Q  120 gtgtaccaatacactcaagttgttgggtgtaccatataatttgcc 164  Q
    ||||||||||||| |||| |  || | ||||||||| ||||||||    
T  21051666 gtgtaccaatacattcaaatctttagatgtaccatagaatttgcc 21051710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 20 - 137
Target Start/End: Complemental strand, 35682237 - 35682124
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||  |          | |||||| ||||||||||||| |||||||||||||| ||    
T  35682237 cgtttttggtaaataagatttagttattataattataggtgatataattttttttt----ttcaaaaagtaactcatttaacaattaatttaaggatatg 35682142  T
Q  120 gtgtaccaatacactcaa 137  Q
    ||||||||||||||||||    
T  35682141 gtgtaccaatacactcaa 35682124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 20 - 161
Target Start/End: Original strand, 13795532 - 13795673
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    |||||||||||||| | ||||| ||||||||||||||||||||| ||||||        || ||||||||||| ||||||||||||||||||  |||  |    
T  13795532 cgtttttggtaaatgatatttaattattataattataggtgatataaaatattttttctcttcaaaaaataacacatttaactattaatttattgattag 13795631  T
Q  120 gtgtaccaatacactcaagttgttgggtgtaccatataattt 161  Q
    |||||||||| ||||||| || || | ||||||||| |||||    
T  13795632 gtgtaccaatgcactcaaattttttgatgtaccatagaattt 13795673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 20 - 163
Target Start/End: Original strand, 2318688 - 2318831
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    |||||||||| ||||||||||| ||| |||||||||||||||| ||||| |        || ||||||||||| |||||||||||||||||   |||  |    
T  2318688 cgtttttggttaataagatttaattagtataattataggtgatggaaaacaatttttctcttcaaaaaataacacatttaactattaatttgttgattgg 2318787  T
Q  120 gtgtaccaatacactcaagttgttgggtgtaccatataatttgc 163  Q
    |||||||||||||||||| || |||| | ||||||| |||||||    
T  2318788 gtgtaccaatacactcaaatttttggatataccataaaatttgc 2318831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 37 - 161
Target Start/End: Complemental strand, 27116589 - 27116465
Alignment:
Q  37 atttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtggtgtaccaatacactca 136  Q
    ||||| |||||||||||||||||||| ||||| |        || ||||||||||| |||||||||||||||||   |||  ||||||||||||||||||    
T  27116589 atttaattattataattataggtgatggaaaacaatttttctcttcaaaaaataacacatttaactattaatttgttgattgggtgtaccaatacactca 27116490  T
Q  137 agttgttgggtgtaccatataattt 161  Q
    | || |||||||||||||| |||||    
T  27116489 aatttttgggtgtaccataaaattt 27116465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 82 - 166
Target Start/End: Complemental strand, 35162433 - 35162349
Alignment:
Q  82 caaaaaataactcatttaactattaatttaaggatgtggtgtaccaatacactcaagttgttgggtgtaccatataatttgccta 166  Q
    ||||||| ||||||||||| ||||||||||| ||| |||||||||| |||||| || || |||||||||||||| | ||||||||    
T  35162433 caaaaaaaaactcatttaattattaatttaaagatttggtgtaccagtacacttaaatttttgggtgtaccataaagtttgccta 35162349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 137
Target Start/End: Original strand, 37431610 - 37431731
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnnc-ctacaaaaaataactcatttaactattaattt---aagga 115  Q
    |||||||||||||||||||||| |||||||||| |||||||| |||||| |       | || ||||||||||| |||||||||||||||||   |  ||    
T  37431610 cgtttttggtaaataagatttaattattataatcataggtgaaagaaaacaattttttctcttcaaaaaataacacatttaactattaatttataattga 37431709  T
Q  116 tgtggtgtaccaatacactcaa 137  Q
    | ||||||||||||||||||||    
T  37431710 tttggtgtaccaatacactcaa 37431731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 22780658 - 22780609
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaat 69  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||||    
T  22780658 cgtttttggtaaataagatttagttactataattacaggtgatagaaaat 22780609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 82 - 161
Target Start/End: Original strand, 38355040 - 38355120
Alignment:
Q  82 caaaaaataactcatttaactattaatttaaggatgtggtgtaccaatacactcaagt-tgttgggtgtaccatataattt 161  Q
    ||||||||||||||||||||||| ||||||||  | |||||||||| ||||||||| | |||| |||||||| ||||||||    
T  38355040 caaaaaataactcatttaactataaatttaagagtttggtgtaccagtacactcaaatatgttaggtgtaccgtataattt 38355120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 20 - 132
Target Start/End: Complemental strand, 36880930 - 36880818
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    |||||||||| ||||||||||| || ||||| ||||||||||| |||||||        || ||||||||||| |||||||||||||||||   |||  |    
T  36880930 cgtttttggttaataagatttaatttttatagttataggtgatggaaaataatttttctcttcaaaaaataacacatttaactattaatttgttgattgg 36880831  T
Q  120 gtgtaccaataca 132  Q
    |||||||||||||    
T  36880830 gtgtaccaataca 36880818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 83 - 161
Target Start/End: Complemental strand, 23408333 - 23408255
Alignment:
Q  83 aaaaaataactcatttaactattaatttaaggatgtggtgtaccaatacactcaagttgttgggtgtaccatataattt 161  Q
    |||||| ||||| ||||  |||||||||||  || |||||||||  ||||||||| |||||||||||||||||||||||    
T  23408333 aaaaaacaactcgtttacttattaatttaataatttggtgtaccggtacactcaaattgttgggtgtaccatataattt 23408255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 112
Target Start/End: Complemental strand, 13118944 - 13118854
Alignment:
Q  22 tttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaa 112  Q
    |||||| | ||||||||||||||||||||||||||  ||||| ||||||        || |||||||||||| ||||||||||||||||||    
T  13118944 tttttgatgaataagatttagttattataattataaatgataaaaaataatatttttcttcaaaaaataacttatttaactattaatttaa 13118854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 164
Target Start/End: Original strand, 36339107 - 36339253
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaata--nnnnnnncctacaaaaaataactcatttaactattaatttaaggatg 117  Q
    |||||||||||||||||||||||||||||||| ||||  ||||| ||||||         ||| ||||||| |||||||||||| |||||||||| ||      
T  36339107 cgtttttggtaaataagatttagttattataaatataaatgataaaaaataatattttttcct-caaaaaacaactcatttaaccattaatttaaagaat 36339205  T
Q  118 tggtgtaccaatacactcaagt-tgttgggtgtaccatataatttgcc 164  Q
      |||||||  ||||||||| | | |||||||||||||| ||||||||    
T  36339206 gagtgtaccggtacactcaaatatattgggtgtaccatagaatttgcc 36339253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 83 - 165
Target Start/End: Original strand, 16432976 - 16433058
Alignment:
Q  83 aaaaaataactcatttaactattaatttaaggatgtggtgtaccaatacactcaagttgttgggtgtaccatataatttgcct 165  Q
    |||||| ||||||||||| |||||| |||||||| ||||||||   ||||||||| |  |||| ||||||||| |||||||||    
T  16432976 aaaaaacaactcatttaattattaaattaaggatttggtgtactggtacactcaaataattggatgtaccataaaatttgcct 16433058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 39979514 - 39979464
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaata 70  Q
    |||||||||||||||||||||| |||||||||||  | |||||||||||||    
T  39979514 cgtttttggtaaataagatttaattattataattgcaagtgatagaaaata 39979464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 95 - 164
Target Start/End: Complemental strand, 36409974 - 36409906
Alignment:
Q  95 atttaactattaatttaaggatgtggtgtaccaatacactcaagttgttgggtgtaccatataatttgcc 164  Q
    |||||| ||||||||||| | | ||||||||| ||||||||||  |||||||||||||||| ||||||||    
T  36409974 atttaattattaatttaatgtt-tggtgtaccgatacactcaaaatgttgggtgtaccataaaatttgcc 36409906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 167
Target Start/End: Original strand, 15725822 - 15725906
Alignment:
Q  83 aaaaaataactcatttaactattaatttaaggatgtggtgtaccaatacactcaagttgttgggtgtaccatataatttgcctat 167  Q
    |||||| ||| ||||||| ||||||||||| ||| |||||||||   |||||||| ||||||  | ||||||| |||||||||||    
T  15725822 aaaaaacaacccatttaattattaatttaaagatttggtgtaccggaacactcaaattgttgaatttaccataaaatttgcctat 15725906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 163
Target Start/End: Complemental strand, 19189187 - 19189107
Alignment:
Q  83 aaaaaataactcatttaactattaatttaaggatgtggtgtaccaatacactcaagttgttgggtgtaccatataatttgc 163  Q
    |||||| || || ||||| |||||||||||  || | |||||||  ||||||||| ||||||||||||||||| |||||||    
T  19189187 aaaaaacaattcgtttaattattaatttaataatttagtgtaccggtacactcaaattgttgggtgtaccatagaatttgc 19189107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 161
Target Start/End: Original strand, 43393087 - 43393159
Alignment:
Q  89 taactcatttaactattaatttaaggatgtggtgtaccaatacactcaagttgttgggtgtaccatataattt 161  Q
    |||||||||||| ||||| |||||  || |||||||||  ||||||||| || ||| ||||||||||||||||    
T  43393087 taactcatttaattattattttaataatttggtgtaccggtacactcaaatttttgagtgtaccatataattt 43393159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 26 - 150
Target Start/End: Original strand, 14096672 - 14096796
Alignment:
Q  26 tggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtggtgtac 125  Q
    |||||||||||||||| ||||||||||| |   ||||| ||||||        || |||||||||||| |||| | |||||||||||  || |||||||     
T  14096672 tggtaaataagatttaattattataattgtcaatgataaaaaataattcttttcttcaaaaaataacttatttgattattaatttaacaatttggtgtat 14096771  T
Q  126 caatacactcaagttgttgggtgta 150  Q
    |||||||||||| || ||| |||||    
T  14096772 caatacactcaaatttttgtgtgta 14096796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 108 - 167
Target Start/End: Original strand, 33145210 - 33145269
Alignment:
Q  108 tttaaggatgtggtgtaccaatacactcaagttgttgggtgtaccatataatttgcctat 167  Q
    ||||| ||| |||||||||||||||||||  || |||||||||||||| |||||| ||||    
T  33145210 tttaatgatttggtgtaccaatacactcatatttttgggtgtaccatagaatttggctat 33145269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 1490904 - 1490954
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaata 70  Q
    |||||||| |||||||||||| ||| |||||| ||||||| ||||||||||    
T  1490904 cgtttttgataaataagatttggtttttataaatataggtaatagaaaata 1490954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 164
Target Start/End: Complemental strand, 25929642 - 25929560
Alignment:
Q  83 aaaaaataactcatttaactattaatttaaggatgtggtgtaccaatacactcaagt-tgttgggtgtaccatataatttgcc 164  Q
    ||||||||||| |||||||||||||||||| ||   ||| ||||  ||||||||| | | |||||||||||||| ||||||||    
T  25929642 aaaaaataacttatttaactattaatttaaagagtgggtatacccgtacactcaaatatattgggtgtaccatagaatttgcc 25929560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 164
Target Start/End: Complemental strand, 29996592 - 29996510
Alignment:
Q  82 caaaaaataactcatttaactattaatttaaggatgtggtgtaccaatacactcaagttgttgggtgtaccatataatttgcc 164  Q
    ||||||| ||||||||||| |||| |||||| ||| || |||| | |||||||||  || |||| ||||||||| ||||||||    
T  29996592 caaaaaacaactcatttaattattgatttaacgatttgatgtaacgatacactcatatttttggatgtaccatagaatttgcc 29996510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 161
Target Start/End: Complemental strand, 31588074 - 31587996
Alignment:
Q  83 aaaaaataactcatttaactattaatttaaggatgtggtgtaccaatacactcaagttgttgggtgtaccatataattt 161  Q
    |||||| ||||  ||||| |||||||||||  || |||||||||| ||||||||| || || ||||||||||| |||||    
T  31588074 aaaaaaaaactattttaattattaatttaataatttggtgtaccagtacactcaaatttttaggtgtaccatagaattt 31587996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 31 - 137
Target Start/End: Original strand, 479945 - 480053
Alignment:
Q  31 aataagatttagttattataattataggtgatagaaaatannnnnnnc--ctacaaaaaataactcatttaactattaatttaaggatgtg-gtgtacca 127  Q
    |||||||||||||||||||||||||| |||||| |||| |          || ||||||| ||||||||||||||||||||||| || ||| |||||||     
T  479945 aataagatttagttattataattataagtgataaaaaaaacaatatttttcttcaaaaaacaactcatttaactattaatttaaaga-gtgagtgtaccg 480043  T
Q  128 atacactcaa 137  Q
    ||||||||||    
T  480044 atacactcaa 480053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 95 - 164
Target Start/End: Complemental strand, 6335458 - 6335390
Alignment:
Q  95 atttaactattaatttaaggatgtggtgtaccaatacactcaagttgttgggtgtaccatataatttgcc 164  Q
    |||||| ||||||||||| | | |||||||||  |||||||||  |||||||||||||||| ||||||||    
T  6335458 atttaattattaatttaatgtt-tggtgtaccggtacactcaaaatgttgggtgtaccatagaatttgcc 6335390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 95 - 164
Target Start/End: Original strand, 16602701 - 16602769
Alignment:
Q  95 atttaactattaatttaaggatgtggtgtaccaatacactcaagttgttgggtgtaccatataatttgcc 164  Q
    |||||| ||||||||||| | | |||||||||  |||||||||  |||||||||||||||| ||||||||    
T  16602701 atttaattattaatttaatgtt-tggtgtaccggtacactcaaaatgttgggtgtaccatagaatttgcc 16602769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 118 - 167
Target Start/End: Complemental strand, 19238840 - 19238791
Alignment:
Q  118 tggtgtaccaatacactcaagttgttgggtgtaccatataatttgcctat 167  Q
    |||||||||  |||||||||  |||||||||||||||| |||||||||||    
T  19238840 tggtgtaccggtacactcaaaatgttgggtgtaccatagaatttgcctat 19238791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 166
Target Start/End: Complemental strand, 25684154 - 25684071
Alignment:
Q  83 aaaaaataactcatttaactattaatttaaggatgtggtgtaccaatacactcaagttg-ttgggtgtaccatataatttgccta 166  Q
    |||||| ||||||||||  ||||||||| | ||| ||||||||| |||||| ||| ||  |||||||||||||| ||||||||||    
T  25684154 aaaaaacaactcatttat-tattaattttacgatttggtgtaccgatacacccaaatttattgggtgtaccatagaatttgccta 25684071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 104; Significance: 5e-52; HSPs: 73)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 20 - 164
Target Start/End: Complemental strand, 27539059 - 27538915
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||| ||    
T  27539059 cgttttcggtaaataagatttagttattataattataggtgatagaaaataattatttcctacaaaaaataactcatttaactattaatttaaggatttg 27538960  T
Q  120 gtgtaccaatacactcaagttgttgggtgtaccatataatttgcc 164  Q
    |||||||||||||||||| ||||||||||||||||| || |||||    
T  27538959 gtgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 27538915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 102; E-Value: 7e-51
Query Start/End: Original strand, 22 - 164
Target Start/End: Complemental strand, 30539711 - 30539569
Alignment:
Q  22 tttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtggt 121  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||| ||||    
T  30539711 tttttggtaaataagatttagttattataattataggtgatagaaaataattttttcctacaaaaaataactcatttaactattaatttaaggatttggt 30539612  T
Q  122 gtaccaatacactcaagttgttgggtgtaccatataatttgcc 164  Q
    ||||||||||||| || ||||||||||||||||| || |||||    
T  30539611 gtaccaatacacttaaattgttgggtgtaccatagaacttgcc 30539569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 20 - 165
Target Start/End: Original strand, 34280491 - 34280636
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||       |||||||||||||||| |||||||||||||||||||||| ||    
T  34280491 cgtttttggtaaataagatttagttattataattatatgtgatagaaaataattttttcctacaaaaaataacttatttaactattaatttaaggatttg 34280590  T
Q  120 gtgtaccaatacactcaagttgttgggtgtaccatataatttgcct 165  Q
    |||||||||||||||||| ||||||||||||||||| || ||||||    
T  34280591 gtgtaccaatacactcaaattgttgggtgtaccatagaacttgcct 34280636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 20 - 164
Target Start/End: Original strand, 51436075 - 51436220
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnn-cctacaaaaaataactcatttaactattaatttaaggatgt 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||| || |    
T  51436075 cgtttttggtaaataagatttagttattataattataggtgatagaaaatattttttttcctacaaaaaataactcatttaactattaatttaagaattt 51436174  T
Q  119 ggtgtaccaatacactcaagttgttgggtgtaccatataatttgcc 164  Q
    ||||||||||||||||||| ||||||||||||||||| ||||||||    
T  51436175 ggtgtaccaatacactcaaattgttgggtgtaccatagaatttgcc 51436220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 20 - 155
Target Start/End: Complemental strand, 52589215 - 52589080
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||| ||    
T  52589215 cgtttttggtaaataagatttagttgttataattataggtgatagaaaataattttttcctacaaaaaataactcatttaactattaatttaaggatttg 52589116  T
Q  120 gtgtaccaatacactcaagttgttgggtgtaccata 155  Q
    |||||||||||||||||| ||||||| |||||||||    
T  52589115 gtgtaccaatacactcaaattgttggatgtaccata 52589080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 22 - 164
Target Start/End: Original strand, 48579174 - 48579315
Alignment:
Q  22 tttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtggt 121  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||       |||| |||||||||||||||||||||||||||||||||| ||||    
T  48579174 tttttggtaaataagatttagttattataattataggtgatagaaaatatttttctccta-aaaaaataactcatttaactattaatttaaggatttggt 48579272  T
Q  122 gtaccaatacactcaagttgttgggtgtaccatataatttgcc 164  Q
    ||||||||||| |||| ||||||| ||||||||||||||||||    
T  48579273 gtaccaatacattcaaattgttggatgtaccatataatttgcc 48579315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 20 - 164
Target Start/End: Original strand, 41759922 - 41760067
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnnc-ctacaaaaaataactcatttaactattaatttaaggatgt 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||| |    
T  41759922 cgtttttggtaaataagatttagttattataattataggtgatagaaaatatattttttactacaaaaaataactcatttaactattaatttaaggattt 41760021  T
Q  119 ggtgtaccaatacactcaagttgttgggtgtaccatataatttgcc 164  Q
    ||||||||||||||||||| ||||||| ||||||||| ||||||||    
T  41760022 ggtgtaccaatacactcaaattgttggatgtaccatagaatttgcc 41760067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 20 - 164
Target Start/End: Complemental strand, 30342968 - 30342825
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| ||       ||||||||||||||||||||||||||||||||||| ||| ||    
T  30342968 cgtttttggtaaataagatttagttattttaattataggtgatagaaa-taattttttcctacaaaaaataactcatttaactattaatttaaagatttg 30342870  T
Q  120 gtgtaccaatacactcaagttgttgggtgtaccatataatttgcc 164  Q
    |||||||||||||||||| | ||||||||||||||||||||||||    
T  30342869 gtgtaccaatacactcaaatggttgggtgtaccatataatttgcc 30342825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 20 - 166
Target Start/End: Complemental strand, 14802856 - 14802710
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    |||||||||||||||||||||||||||||||||||||||||||  ||||||        |||||||||||||||||||||||||||||||||||||| ||    
T  14802856 cgtttttggtaaataagatttagttattataattataggtgatgaaaaatattttttttctacaaaaaataactcatttaactattaatttaaggatttg 14802757  T
Q  120 gtgtaccaatacactcaagttgttgggtgtaccatataatttgccta 166  Q
    ||||| |||||||||||| |||||| |||||||||| ||||||||||    
T  14802756 gtgtatcaatacactcaaattgttgagtgtaccatagaatttgccta 14802710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 23 - 164
Target Start/End: Complemental strand, 3716466 - 3716325
Alignment:
Q  23 ttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtggtg 122  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||       ||||||||||||||||||||||||||||||||||||||| |||||    
T  3716466 ttttggtgaataagatttagttattataatcataggtgatagaaaataattttttcctacaaaaaataactcatttaactattaatttaaggatttggtg 3716367  T
Q  123 taccaatacactcaagttgttgggtgtaccatataatttgcc 164  Q
    ||||||||||||||| || |||| ||||||||| ||||||||    
T  3716366 taccaatacactcaaattattggatgtaccatagaatttgcc 3716325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 20 - 164
Target Start/End: Complemental strand, 28037830 - 28037685
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnnc-ctacaaaaaataactcatttaactattaatttaaggatgt 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||         ||||||||| |||||||||||||||||||||||||||| |    
T  28037830 cgtttttggtaaataagatttagttattataattataggtgatagaaaatatttttttttctacaaaaagtaactcatttaactattaatttaaggattt 28037731  T
Q  119 ggtgtaccaatacactcaagttgttgggtgtaccatataatttgcc 164  Q
    ||||||||||||||||||| |||||||||| |||||| ||||||||    
T  28037730 ggtgtaccaatacactcaaattgttgggtgcaccatagaatttgcc 28037685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 20 - 165
Target Start/End: Complemental strand, 37855265 - 37855120
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||       | ||||||||||||||||||||||||||||||||||||| ||    
T  37855265 cgtttttggtaaataagatttagttattataattataggtgatagaaaatatttttttcatacaaaaaataactcatttaactattaatttaaggatttg 37855166  T
Q  120 gtgtaccaatacactcaagttgttgggtgtaccatataatttgcct 165  Q
    ||||||| |||||||||| ||||| ||| || |||| |||||||||    
T  37855165 gtgtacctatacactcaaattgttaggtatatcatagaatttgcct 37855120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 20 - 151
Target Start/End: Complemental strand, 46041845 - 46041714
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||       ||||||||||||||||||||||||||||||||||| ||| ||    
T  46041845 cgtttttggtaaataagatttagttattataattataggtgatataaaataattttttcctacaaaaaataactcatttaactattaatttaaagatttg 46041746  T
Q  120 gtgtaccaatacactcaagttgttgggtgtac 151  Q
    ||||| |||||||||||| ||||||| |||||    
T  46041745 gtgtatcaatacactcaaattgttggatgtac 46041714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 20 - 165
Target Start/End: Complemental strand, 55722620 - 55722475
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||       |||||||||||||||||| |||||||||||||||||||| |     
T  55722620 cgtttttggtaaataagatttagttgttataattataggtgatagaaaatatttttttcctacaaaaaataactcaattaactattaatttaaggattta 55722521  T
Q  120 gtgtaccaatacactcaagttgttgggtgtaccatataatttgcct 165  Q
    ||||||||||||| |||| ||||| | |||| |||| |||||||||    
T  55722520 gtgtaccaatacattcaaattgttagatgtatcatagaatttgcct 55722475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 20 - 166
Target Start/End: Original strand, 52809207 - 52809352
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||       |||| ||||||||||||||||||||||||||||||  ||  |    
T  52809207 cgtttttggtaaataagatttagttattataattataggtgattgaaaatatttttt-cctataaaaaataactcatttaactattaatttaaaaattcg 52809305  T
Q  120 gtgtaccaatacactcaagttgttgggtgtaccatataatttgccta 166  Q
    |||||||||||||||||| ||||||| |||||||||  |||||||||    
T  52809306 gtgtaccaatacactcaaattgttggatgtaccatagtatttgccta 52809352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 20 - 164
Target Start/End: Original strand, 53389108 - 53389253
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnn-cctacaaaaaataactcatttaactattaatttaaggatgt 118  Q
    |||||||| ||||||||||||||||||||||||||||| ||||||||||||        ||||||||||||||||||||||||||||||||||| ||| |    
T  53389108 cgtttttgataaataagatttagttattataattatagatgatagaaaatattttttttcctacaaaaaataactcatttaactattaatttaaagattt 53389207  T
Q  119 ggtgtaccaatacactcaagttgttgggtgtaccatataatttgcc 164  Q
     ||||||| |||||||||| ||||| | ||||||||| ||||||||    
T  53389208 agtgtaccgatacactcaaattgtttgatgtaccatagaatttgcc 53389253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 20 - 164
Target Start/End: Original strand, 37519226 - 37519370
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||| ||||| |||||||||||||| | | ||    
T  37519226 cgttattggtaaataagatttagttattataattataggtgatagaaaataattttttcctacaaaaaataattcattgaactattaatttaatggtatg 37519325  T
Q  120 gtgtaccaatacactcaagttgttgggtgtaccatataatttgcc 164  Q
    ||||||||||||| |||| |  |||||| ||||||| ||||||||    
T  37519326 gtgtaccaatacattcaaatgattgggtataccatagaatttgcc 37519370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 20 - 164
Target Start/End: Original strand, 37523442 - 37523586
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||| ||||| |||||||||||||| | | ||    
T  37523442 cgttattggtaaataagatttagttattataattataggtgatagaaaataattttttcctacaaaaaataattcattgaactattaatttaatggtatg 37523541  T
Q  120 gtgtaccaatacactcaagttgttgggtgtaccatataatttgcc 164  Q
    ||||||||||||| |||| |  |||||| ||||||| ||||||||    
T  37523542 gtgtaccaatacattcaaatgattgggtataccatagaatttgcc 37523586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 46 - 165
Target Start/End: Original strand, 43137653 - 43137772
Alignment:
Q  46 ttataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtggtgtaccaatacactcaagttgttgg 145  Q
    ||||||||||||||||| |||||||       |||||||||||||||||||||||||||||||||||| || ||||||||||||||||| || |||||||    
T  43137653 ttataattataggtgatcgaaaataattttttcctacaaaaaataactcatttaactattaatttaagaatttggtgtaccaatacacttaaattgttgg 43137752  T
Q  146 gtgtaccatataatttgcct 165  Q
    |||||||||| || ||||||    
T  43137753 gtgtaccatagaacttgcct 43137772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 20 - 165
Target Start/End: Complemental strand, 36091202 - 36091058
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    |||||||| ||||||||||||| |||||||||||||||||||||||||| |       | | ||||||||||| ||||||||||||||||||| ||| ||    
T  36091202 cgtttttgataaataagatttaattattataattataggtgatagaaaacagttttctctt-caaaaaataacacatttaactattaatttaatgatttg 36091104  T
Q  120 gtgtaccaatacactcaagttgttgggtgtaccatataatttgcct 165  Q
    |||||||||||||||||  |  |||| |||||||||||||||||||    
T  36091103 gtgtaccaatacactcatatctttggatgtaccatataatttgcct 36091058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 22 - 162
Target Start/End: Complemental strand, 38835992 - 38835854
Alignment:
Q  22 tttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtggt 121  Q
    |||||||||||||||||||||||||||||||||||| | ||||||| ||       ||||||||||| |||||||||||||||||||||||| || || |    
T  38835992 tttttggtaaataagatttagttattataattatagatcatagaaa-taattttttcctacaaaaaa-aactcatttaactattaatttaagaatttgat 38835895  T
Q  122 gtaccaatacactcaagttgttgggtgtaccatataatttg 162  Q
    |||||||||||||||| || || ||||||||||| ||||||    
T  38835894 gtaccaatacactcaaattattaggtgtaccatagaatttg 38835854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 22 - 165
Target Start/End: Complemental strand, 29646766 - 29646623
Alignment:
Q  22 tttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtggt 121  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||        || |||||||||||  |||||||||||||||||  ||| ||||    
T  29646766 tttttggtaaataagatttaattattataattataggtgatagaaaataacttttttcttcaaaaaataacatatttaactattaatttattgatttggt 29646667  T
Q  122 gtaccaatacactcaagttgttgggtgtaccatataatttgcct 165  Q
    ||||||||||||||||  | || | ||||||||| |||||||||    
T  29646666 gtaccaatacactcaaaatttttgatgtaccatagaatttgcct 29646623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 21 - 164
Target Start/End: Complemental strand, 38975419 - 38975277
Alignment:
Q  21 gtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaa-taactcatttaactattaatttaaggatgtg 119  Q
    |||||| ||||||||||| |||||||||||||||||||||||||||||||        || ||||||| |||||||||||||||||||||||| ||| |     
T  38975419 gtttttcgtaaataagatatagttattataattataggtgatagaaaataatttttttcttcaaaaaaataactcatttaactattaatttaaagatttt 38975320  T
Q  120 gtgtaccaatacactcaagttgttgggtgtaccatataatttgcc 164  Q
    |||||| |||||||||||  | |||||||||||||| ||||||||    
T  38975319 gtgtactaatacactcaa--ttttgggtgtaccatagaatttgcc 38975277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 20 - 165
Target Start/End: Original strand, 39162067 - 39162212
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| |        || ||||||||||| ||||||||||||||||||  ||  ||    
T  39162067 cgtttttggtaaataagatttaattattataattataggtgatagaaaacaatttttctcttcaaaaaataacacatttaactattaatttattgacttg 39162166  T
Q  120 gtgtaccaatacactcaagttgttgggtgtaccatataatttgcct 165  Q
    |||||||||||||| ||| || ||| |||||||||| |||| ||||    
T  39162167 gtgtaccaatacacccaaatttttgagtgtaccatagaattggcct 39162212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 21 - 165
Target Start/End: Complemental strand, 9858387 - 9858243
Alignment:
Q  21 gtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtgg 120  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||||| |        || ||||||||||| ||||||||||||||||||| ||| |||    
T  9858387 gtttttgataaataagatttaattattataattataggtgatagaaaacaatttttctcttcaaaaaataacacatttaactattaatttaatgatttgg 9858288  T
Q  121 tgtaccaatacactcaagttgttgggtgtaccatataatttgcct 165  Q
    |||| |||||||||||  |  |||||||||| ||| |||||||||    
T  9858287 tgtatcaatacactcatatctttgggtgtactatagaatttgcct 9858243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 21 - 165
Target Start/End: Original strand, 48066268 - 48066412
Alignment:
Q  21 gtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtgg 120  Q
    ||||||| ||||||||||||| | ||||||||||||||||||||||||||        ||||||||||||| | ||| |||||||||||||| ||| |||    
T  48066268 gtttttgctaaataagatttaatcattataattataggtgatagaaaataatttttttctacaaaaaataatttattgaactattaatttaatgatttgg 48066367  T
Q  121 tgtaccaatacactcaagttgttgggtgtaccatataatttgcct 165  Q
    | ||||||||||||||| |  |||| ||||||||| |||||||||    
T  48066368 tataccaatacactcaaatgattggatgtaccatagaatttgcct 48066412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 22 - 160
Target Start/End: Original strand, 36592298 - 36592437
Alignment:
Q  22 tttttggtaaataagatttagttattataattataggtgatag-aaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtgg 120  Q
    ||||| |||||||||||||||||||||||||||||| |||| | |||||          | ||||||||||||||||||||||||||||||||||| |||    
T  36592298 ttttttgtaaataagatttagttattataattatagatgattgtaaaatgattttttttttcaaaaaataactcatttaactattaatttaaggatttgg 36592397  T
Q  121 tgtaccaatacactcaagttgttgggtgtaccatataatt 160  Q
    |||| |||||||||||| || |||||||||||||| ||||    
T  36592398 tgtaacaatacactcaaatttttgggtgtaccataaaatt 36592437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 20 - 167
Target Start/End: Original strand, 46216034 - 46216181
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    |||||||||| ||||||||||| |||||||||||||||||||||||||| |        || ||||||||||| ||||||| |||||||||   |||  |    
T  46216034 cgtttttggttaataagatttaattattataattataggtgatagaaaacaatttttctcttcaaaaaataacacatttaattattaatttgttgattgg 46216133  T
Q  120 gtgtaccaatacactcaagttgttgggtgtaccatataatttgcctat 167  Q
    |||||||||||||||||| || |||||||||| ||| |||||||||||    
T  46216134 gtgtaccaatacactcaaatttttgggtgtacaatagaatttgcctat 46216181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 21 - 167
Target Start/End: Complemental strand, 31908586 - 31908440
Alignment:
Q  21 gtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtgg 120  Q
    ||||||| ||||||||||||  |||||||||||||||||||||||||| |        || |||||||| || ||||||||||||||||||| ||| |||    
T  31908586 gtttttgataaataagatttgattattataattataggtgatagaaaacaatttttctcttcaaaaaatcacacatttaactattaatttaatgatttgg 31908487  T
Q  121 tgtaccaatacactcaagttgttgggtgtaccatataatttgcctat 167  Q
    ||||||||||||||||  |  ||||||||| |||| |||||||||||    
T  31908486 tgtaccaatacactcatatctttgggtgtatcatagaatttgcctat 31908440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 20 - 165
Target Start/End: Original strand, 56361575 - 56361718
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    |||||||||||||||| ||||| ||||||||||||||||||||| ||||||        || ||||||||||| ||||||||||||||||||  ||| ||    
T  56361575 cgtttttggtaaataatatttaattattataattataggtgatataaaatattttttctcttcaaaaaataacacatttaactattaatttattgatttg 56361674  T
Q  120 gtgtaccaatacactcaagttgttgggtgtaccatataatttgcct 165  Q
    |||||||||||||||||| || ||  ||||| |||| |||||||||    
T  56361675 gtgtaccaatacactcaaattttt--gtgtaacatagaatttgcct 56361718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 22 - 105
Target Start/End: Original strand, 33076245 - 33076328
Alignment:
Q  22 tttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactatt 105  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||| ||||    
T  33076245 tttttggtaaataagatttagttattataattataggtgatagaaaataattttttcctacaaaaaataactcatttaagtatt 33076328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 50 - 165
Target Start/End: Complemental strand, 47302145 - 47302028
Alignment:
Q  50 aattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactatta--atttaaggatgtggtgtaccaatacactcaagttgttgggt 147  Q
    |||||||||||||||||||||       |||||||||| ||||||||||||||||||  |||||||||| || ||||||||||||||||| ||||| |||    
T  47302145 aattataggtgatagaaaataattttttcctacaaaaagtaactcatttaactattataatttaaggatttgatgtaccaatacactcaaattgttaggt 47302046  T
Q  148 gtaccatataatttgcct 165  Q
    | |||||| |||||||||    
T  47302045 gcaccataaaatttgcct 47302028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 20 - 161
Target Start/End: Complemental strand, 47302540 - 47302399
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    |||||||||| ||||||||||| |||||||||||||||||||| ||||| |        || ||||||||||| |||||||||||||||||   |||  |    
T  47302540 cgtttttggttaataagatttaattattataattataggtgatggaaaacaatttttctcttcaaaaaataacacatttaactattaatttgttgattgg 47302441  T
Q  120 gtgtaccaatacactcaagttgttgggtgtaccatataattt 161  Q
    |||||||||||||||||| || ||| |||||||||| |||||    
T  47302440 gtgtaccaatacactcaaatttttgagtgtaccataaaattt 47302399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 20 - 165
Target Start/End: Original strand, 1414364 - 1414506
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    |||||||| |||||| |||||| ||||||||||||||||||||||||||||        ||  |||||| |   ||||||||||||||||||| ||| ||    
T  1414364 cgtttttgataaatatgatttaattattataattataggtgatagaaaataatttttctcttaaaaaaaca---catttaactattaatttaatgatttg 1414460  T
Q  120 gtgtaccaatacactcaagttgttgggtgtaccatataatttgcct 165  Q
    |||||||||||||||||| |  || ||||| ||||| |||||||||    
T  1414461 gtgtaccaatacactcaaatctttaggtgtgccataaaatttgcct 1414506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 22 - 70
Target Start/End: Complemental strand, 52591946 - 52591898
Alignment:
Q  22 tttttggtaaataagatttagttattataattataggtgatagaaaata 70  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  52591946 tttttggtaaataagatttagttattataattataggtgatagaaaata 52591898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 22 - 166
Target Start/End: Complemental strand, 43363470 - 43363325
Alignment:
Q  22 tttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtggt 121  Q
    |||||| | ||||||||||||||||||||||||||| ||||| ||||||        || ||||||| ||||||||||||||||||||||| ||     |    
T  43363470 tttttgatgaataagatttagttattataattatagatgataaaaaataatatttttcttcaaaaaacaactcatttaactattaatttaaagagcgaat 43363371  T
Q  122 gtaccaatacactcaagt-tgttgggtgtaccatataatttgccta 166  Q
     ||||||||||||||| | | || ||||||||||| ||||||||||    
T  43363370 ataccaatacactcaaatatattaggtgtaccataaaatttgccta 43363325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 164
Target Start/End: Original strand, 50383602 - 50383736
Alignment:
Q  31 aataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg-gtgtaccaat 129  Q
    |||||||||||||||||||||||||| |||||| |||| |        || ||||||| ||||||||||||||||||||||| || ||| |||||||  |    
T  50383602 aataagatttagttattataattataagtgataaaaaacaatatttttcttcaaaaaacaactcatttaactattaatttaaaga-gtgagtgtaccggt 50383700  T
Q  130 acactcaagt-tgttgggtgtaccatataatttgcc 164  Q
    |||||||| | | |||| ||||||||||||||||||    
T  50383701 acactcaaatatattggatgtaccatataatttgcc 50383736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 95 - 164
Target Start/End: Original strand, 18425455 - 18425524
Alignment:
Q  95 atttaactattaatttaaggatgtggtgtaccaatacactcaagttgttgggtgtaccatataatttgcc 164  Q
    |||||||||||||||||| ||| |||||||||||||||||||  |  |||||||||||||| ||||||||    
T  18425455 atttaactattaatttaatgatttggtgtaccaatacactcatatctttgggtgtaccatagaatttgcc 18425524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 22 - 160
Target Start/End: Original strand, 46004588 - 46004726
Alignment:
Q  22 tttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtggt 121  Q
    |||||| ||||||||||||| ||||||||||| |||||||||| ||| |        || ||||||||||| ||||| || |||||| ||   || ||||    
T  46004588 tttttgataaataagatttaattattataattgtaggtgatagtaaacaatttttctcttcaaaaaataacacattttacgattaatatattaatttggt 46004687  T
Q  122 gtaccaatacactcaagttgttgggtgtaccatataatt 160  Q
    |||||||||||||||| || |||| ||||||||| ||||    
T  46004688 gtaccaatacactcaaatttttggatgtaccatagaatt 46004726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 70
Target Start/End: Original strand, 30891399 - 30891447
Alignment:
Q  22 tttttggtaaataagatttagttattataattataggtgatagaaaata 70  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  30891399 tttttgataaataagatttaattattataattataggtgatagaaaata 30891447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 84 - 172
Target Start/End: Complemental strand, 31681417 - 31681329
Alignment:
Q  84 aaaaataactcatttaactattaatttaaggatgtggtgtaccaatacactcaagttgttgggtgtaccatataatttgcctatcaaat 172  Q
    ||||||||| || |||||||||||||||  ||| ||||||||||||||||  || || || ||||||||||| ||||||||||| ||||    
T  31681417 aaaaataacacacttaactattaatttattgatttggtgtaccaatacaccaaaatttttaggtgtaccatagaatttgcctattaaat 31681329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 21 - 172
Target Start/End: Original strand, 32737452 - 32737603
Alignment:
Q  21 gtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtgg 120  Q
    ||||||||||||||| ||||| ||||||||||||||  ||||||||  ||        ||  |||||| || |||||||||||||||| |||  || |||    
T  32737452 gtttttggtaaataaaatttaattattataattataaatgatagaatgtaatatttttctttaaaaaacaattcatttaactattaatataaatatttgg 32737551  T
Q  121 tgtaccaatacactcaagttgttgggtgtaccatataatttgcctatcaaat 172  Q
    || |||  ||||||||| || ||| |||||||||| ||||||||||| ||||    
T  32737552 tgcaccggtacactcaaattattgagtgtaccatagaatttgcctataaaat 32737603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 22 - 164
Target Start/End: Original strand, 33491425 - 33491568
Alignment:
Q  22 tttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtggt 121  Q
    |||||| | ||||||||||||||||||||||||||  ||||| ||||||        || ||||||| |||| |||||||||||||||||| ||   |||    
T  33491425 tttttgatgaataagatttagttattataattataaatgataaaaaataatatttttcttcaaaaaacaacttatttaactattaatttaaagagcgggt 33491524  T
Q  122 gtaccaatacactcaagt-tgttgggtgtaccatataatttgcc 164  Q
    |||||  ||||||||| | | |||| ||||||||| ||||||||    
T  33491525 gtaccggtacactcaaatatattggatgtaccatagaatttgcc 33491568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 83 - 165
Target Start/End: Original strand, 52324292 - 52324374
Alignment:
Q  83 aaaaaataactcatttaactattaatttaaggatgtggtgtaccaatacactcaagttgttgggtgtaccatataatttgcct 165  Q
    |||||| |||| |||||| ||||||||||| | | |||||||||  |||||||||  |||||||||||||||| |||||||||    
T  52324292 aaaaaacaactaatttaaatattaatttaatgctttggtgtaccggtacactcaaaatgttgggtgtaccataaaatttgcct 52324374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 20 - 137
Target Start/End: Original strand, 53695659 - 53695776
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    |||||||||| ||||||||||  |||||||||||||||||||| ||||| |        || ||||||||||| ||||| |||||||||||   ||| ||    
T  53695659 cgtttttggttaataagattttattattataattataggtgatggaaaacaatttttctcttcaaaaaataacacatttgactattaattttttgatttg 53695758  T
Q  120 gtgtaccaatacactcaa 137  Q
     |||||||||||| ||||    
T  53695759 atgtaccaatacattcaa 53695776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 165
Target Start/End: Original strand, 352736 - 352880
Alignment:
Q  22 tttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtggt 121  Q
    |||||| | ||||||||||||||||||||||||||  ||||| ||||||        || ||||||| |||| |||||||||||||||||| ||   |||    
T  352736 tttttgatgaataagatttagttattataattataaatgataaaaaataatatttttcttcaaaaaagaacttatttaactattaatttaaagagtaggt 352835  T
Q  122 gtaccaatacactcaagt-tgttgggtgtaccatataatttgcct 165  Q
    |||||  |||||| || | | |||| ||||||||| |||||||||    
T  352836 gtaccggtacacttaaatatattggatgtaccatagaatttgcct 352880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 164
Target Start/End: Original strand, 13548727 - 13548810
Alignment:
Q  81 acaaaaaataactcatttaactattaatttaaggatgtggtgtaccaatacactcaagttgttgggtgtaccatataatttgcc 164  Q
    |||||| | ||||||||||| ||||||||||| ||| |||||||||  ||||||||| || |||| || |||||| ||||||||    
T  13548727 acaaaacacaactcatttaattattaatttaatgatttggtgtaccggtacactcaaatttttggatgcaccataaaatttgcc 13548810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 82 - 167
Target Start/End: Original strand, 48647345 - 48647431
Alignment:
Q  82 caaaaaataactcatttaactattaatttaaggatgtg-gtgtaccaatacactcaagt-tgttgggtgtaccatataatttgcctat 167  Q
    ||||||||||||||||||||||||||| ||| || ||| |||||||  ||||||||| | | |||||||||||||| |||||||||||    
T  48647345 caaaaaataactcatttaactattaatctaaaga-gtgagtgtaccggtacactcaaatatattgggtgtaccatagaatttgcctat 48647431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 82 - 164
Target Start/End: Original strand, 53936836 - 53936919
Alignment:
Q  82 caaaaaataactcatttaactattaatttaaggatgtggtgtaccaatacactcaagt-tgttgggtgtaccatataatttgcc 164  Q
    ||||||| ||||||||||||||||||||||| ||   ||||||||  ||||||||| | | |||||||||||||| ||||||||    
T  53936836 caaaaaacaactcatttaactattaatttaaagaatgggtgtaccggtacactcaaatatattgggtgtaccatagaatttgcc 53936919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 22 - 137
Target Start/End: Complemental strand, 423293 - 423178
Alignment:
Q  22 tttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtggt 121  Q
    |||||| | ||||||||||||||||||||||||||  ||||| ||||||        || ||||||| |||| ||||||||| |||||||| ||   |||    
T  423293 tttttgatgaataagatttagttattataattataaatgataaaaaataatatttttcttcaaaaaacaacttatttaactactaatttaaagaatgggt 423194  T
Q  122 gtaccaatacactcaa 137  Q
    ||||| ||||||||||    
T  423193 gtaccgatacactcaa 423178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 83 - 165
Target Start/End: Original strand, 6807319 - 6807401
Alignment:
Q  83 aaaaaataactcatttaactattaatttaaggatgtggtgtaccaatacactcaagttgttgggtgtaccatataatttgcct 165  Q
    |||||| |||| |||||| ||||||||||| | | ||||||||  ||||| ||||  |||||||||||||||| |||||||||    
T  6807319 aaaaaacaactaatttaattattaatttaatgttttggtgtactgatacattcaaaatgttgggtgtaccatagaatttgcct 6807401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 83 - 165
Target Start/End: Complemental strand, 19842519 - 19842437
Alignment:
Q  83 aaaaaataactcatttaactattaatttaaggatgtggtgtaccaatacactcaagttgttgggtgtaccatataatttgcct 165  Q
    |||||| ||||||||||| |||||||||||  || ||||||||   ||||||||| || |||| ||||||||| |||||||||    
T  19842519 aaaaaaaaactcatttaattattaatttaacaatttggtgtactggtacactcaaatttttggatgtaccatagaatttgcct 19842437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 164
Target Start/End: Complemental strand, 52940561 - 52940480
Alignment:
Q  83 aaaaaataactcatttaactattaatttaaggatgtggtgtaccaatacactcaagttgttgggtgtaccatataatttgcc 164  Q
    |||||| ||||| ||||| |||||||||||  || ||||| |||  ||||||||| ||||||| ||||||||| ||||||||    
T  52940561 aaaaaacaactcgtttaattattaatttaataatttggtgcaccggtacactcaaattgttggatgtaccatagaatttgcc 52940480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 165
Target Start/End: Complemental strand, 50607819 - 50607683
Alignment:
Q  31 aataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaat-aactcatttaactattaatttaaggatgtg-gtgtaccaa 128  Q
    ||||||||||||||||||||| ||||  ||||||||||||        || |||||||  |||||||||||| |||||||||| || ||| |||||||      
T  50607819 aataagatttagttattataaatataaatgatagaaaataatatttttcttcaaaaaaacaactcatttaaccattaatttaaaga-gtgcgtgtaccgg 50607721  T
Q  129 tacactcaagt-tgttgggtgtaccatataatttgcct 165  Q
    ||||||||| | | |||||||||||||| |||||||||    
T  50607720 tacactcaaatatattgggtgtaccataaaatttgcct 50607683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 34 - 69
Target Start/End: Complemental strand, 9381154 - 9381119
Alignment:
Q  34 aagatttagttattataattataggtgatagaaaat 69  Q
    |||||||||||||||||||||||| |||||||||||    
T  9381154 aagatttagttattataattatagatgatagaaaat 9381119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 83 - 166
Target Start/End: Original strand, 18052264 - 18052347
Alignment:
Q  83 aaaaaataactcatttaactattaatttaaggatgtggtgtaccaatacactcaagttgttgggtgtaccatataatttgccta 166  Q
    |||||||||||| ||||| |||||||||||  || || ||||||  ||||||||| |||||  |||||| ||| ||||||||||    
T  18052264 aaaaaataactcgtttaattattaatttaataatttgatgtacccctacactcaaattgttaagtgtactatagaatttgccta 18052347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 165 - 200
Target Start/End: Complemental strand, 28926063 - 28926028
Alignment:
Q  165 tatcaaattaccacaaatttatcatattcatctcac 200  Q
    ||||||||||||||||||||||||||||||| ||||    
T  28926063 tatcaaattaccacaaatttatcatattcatatcac 28926028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 83 - 166
Target Start/End: Original strand, 30168425 - 30168508
Alignment:
Q  83 aaaaaataactcatttaactattaatttaaggatgtggtgtaccaatacactcaagttgttgggtgtaccatataatttgccta 166  Q
    |||||| |||| |||||| ||||||||||| | | | ||||||| ||||||||||  ||||| ||||||| || ||||||||||    
T  30168425 aaaaaacaactaatttaattattaatttaatgctttagtgtaccgatacactcaaaatgttgagtgtaccttaaaatttgccta 30168508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 83 - 162
Target Start/End: Original strand, 37992007 - 37992086
Alignment:
Q  83 aaaaaataactcatttaactattaatttaaggatgtggtgtaccaatacactcaagttgttgggtgtaccatataatttg 162  Q
    |||||| |||| |||||| ||||||||||| | | || ||||||  |||||||||  |||||||||||||||| ||||||    
T  37992007 aaaaaacaactaatttaattattaatttaatgctttgatgtaccggtacactcaaaatgttgggtgtaccataaaatttg 37992086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 161
Target Start/End: Original strand, 38961289 - 38961367
Alignment:
Q  83 aaaaaataactcatttaactattaatttaaggatgtggtgtaccaatacactcaagttgttgggtgtaccatataattt 161  Q
    |||||| |||||||||||   ||||||||| ||| ||||||||| ||||| ||||  | |||||||||||||| |||||    
T  38961289 aaaaaaaaactcatttaatgtttaatttaacgatttggtgtaccgatacaatcaaaattttgggtgtaccatagaattt 38961367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 151
Target Start/End: Original strand, 42881352 - 42881422
Alignment:
Q  82 caaaaaataactcatttaactattaatttaaggatgtggtgtaccaatacactcaagt-tgttgggtgtac 151  Q
    ||||||||||||||||||||||| ||||| ||  | |||||||||  ||||||||| | ||||||||||||    
T  42881352 caaaaaataactcatttaactataaattttagactttggtgtaccggtacactcaaatatgttgggtgtac 42881422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 95 - 164
Target Start/End: Original strand, 17370614 - 17370682
Alignment:
Q  95 atttaactattaatttaaggatgtggtgtaccaatacactcaagttgttgggtgtaccatataatttgcc 164  Q
    |||||| ||||||||||| | | |||||||||  |||||||||  |||||||||||||||| ||||||||    
T  17370614 atttaattattaatttaatgtt-tggtgtaccggtacactcaaaatgttgggtgtaccatagaatttgcc 17370682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 31 - 68
Target Start/End: Original strand, 23059040 - 23059077
Alignment:
Q  31 aataagatttagttattataattataggtgatagaaaa 68  Q
    |||||||||||||||||||||||||| |||||| ||||    
T  23059040 aataagatttagttattataattataagtgataaaaaa 23059077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 84 - 167
Target Start/End: Original strand, 23059095 - 23059179
Alignment:
Q  84 aaaaataactcatttaactattaatttaaggatgtg-gtgtaccaatacactcaagt-tgttgggtgtaccatataatttgcctat 167  Q
    ||||| |||||||||||| |||||||||| || ||| ||||||| |||||||||| | | |||||||||||||| ||||| |||||    
T  23059095 aaaaacaactcatttaacgattaatttaaaga-gtgagtgtaccgatacactcaaatatattgggtgtaccatagaattttcctat 23059179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 31 - 68
Target Start/End: Complemental strand, 29582099 - 29582062
Alignment:
Q  31 aataagatttagttattataattataggtgatagaaaa 68  Q
    |||||||||||||||||||||||||| |||||| ||||    
T  29582099 aataagatttagttattataattataagtgataaaaaa 29582062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 83 - 167
Target Start/End: Complemental strand, 36569729 - 36569645
Alignment:
Q  83 aaaaaataactcatttaactattaatttaaggatgtggtgtaccaatacactcaagttg-ttgggtgtaccatataatttgcctat 167  Q
    |||||| ||||||||||  ||||||||| | ||  ||||||||| |||||| ||| ||  ||||||||||||||||||||||||||    
T  36569729 aaaaaacaactcatttat-tattaattttacgacttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcctat 36569645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 83 - 164
Target Start/End: Original strand, 39380724 - 39380805
Alignment:
Q  83 aaaaaataactcatttaactattaatttaaggatgtggtgtaccaatacactcaagttgttgggtgtaccatataatttgcc 164  Q
    |||||| ||||||||||| | ||||||||| ||| |||||||||  |||||| || || |||  ||||||||| ||||||||    
T  39380724 aaaaaaaaactcatttaattgttaatttaatgatttggtgtaccggtacacttaaatttttgaatgtaccatagaatttgcc 39380805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 95 - 164
Target Start/End: Complemental strand, 48207146 - 48207078
Alignment:
Q  95 atttaactattaatttaaggatgtggtgtaccaatacactcaagttgttgggtgtaccatataatttgcc 164  Q
    |||||| ||||||||||| | | |||||||||  |||||||||  |||||||||||||||| ||||||||    
T  48207146 atttaattattaatttaatgtt-tggtgtaccggtacactcaaaatgttgggtgtaccatagaatttgcc 48207078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 31 - 68
Target Start/End: Original strand, 56104673 - 56104710
Alignment:
Q  31 aataagatttagttattataattataggtgatagaaaa 68  Q
    |||||||||||||||||||||||||| |||||| ||||    
T  56104673 aataagatttagttattataattataagtgataaaaaa 56104710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 167
Target Start/End: Original strand, 1434127 - 1434211
Alignment:
Q  84 aaaaataactcatttaactattaatttaaggatgtggtgtaccaatacactcaagt-tgttgggtgtaccatataatttgcctat 167  Q
    |||||||| |||||||||||| ||||||||| | ||||||||   ||||||||| | |||||| |||||| || ||||| |||||    
T  1434127 aaaaataattcatttaactataaatttaagggtctggtgtactggtacactcaaatatgttggatgtaccgtaaaatttacctat 1434211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 70
Target Start/End: Original strand, 5970963 - 5971011
Alignment:
Q  22 tttttggtaaataagatttagttattataattataggtgatagaaaata 70  Q
    |||||| | ||||||||||||||||||||||||||  ||||| ||||||    
T  5970963 tttttgatgaataagatttagttattataattataaatgataaaaaata 5971011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 55
Target Start/End: Original strand, 27950519 - 27950551
Alignment:
Q  23 ttttggtaaataagatttagttattataattat 55  Q
    ||||||||||||||||||| |||||||||||||    
T  27950519 ttttggtaaataagatttaattattataattat 27950551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 162
Target Start/End: Complemental strand, 32570450 - 32570370
Alignment:
Q  82 caaaaaataactcatttaactattaatttaaggatgtggtgtaccaatacactcaagttgttgggtgtaccatataatttg 162  Q
    |||||||||||| |||||| ||||||||||| | | ||||| |||  |||||||||  | |||| ||||||||| ||||||    
T  32570450 caaaaaataactaatttaattattaatttaaaggtttggtgcaccggtacactcaaaattttggatgtaccatagaatttg 32570370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 102; Significance: 7e-51; HSPs: 100)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 102; E-Value: 7e-51
Query Start/End: Original strand, 20 - 166
Target Start/End: Original strand, 31930960 - 31931106
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||       ||||||||||||||||||||||||||||||||||||||| ||    
T  31930960 cgtttttggtaaataagatttagttattataattatagatgatagaaaatatatttttcctacaaaaaataactcatttaactattaatttaaggatttg 31931059  T
Q  120 gtgtaccaatacactcaagttgttgggtgtaccatataatttgccta 166  Q
     ||||||||||||||||| ||||||| ||||||||| ||||||||||    
T  31931060 atgtaccaatacactcaaattgttggatgtaccatagaatttgccta 31931106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 20 - 165
Target Start/End: Complemental strand, 45423753 - 45423608
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||| ||    
T  45423753 cgtttttggtaaataagatttagttattataattataggtgatagaaaataattttttcctacaaaaaataactcatttaactattaatttaaggatttg 45423654  T
Q  120 gtgtaccaatacactcaagttgttgggtgtaccatataatttgcct 165  Q
    ||||||||||||||| || ||||||| ||||||||| || ||||||    
T  45423653 gtgtaccaatacacttaaattgttggatgtaccatagaacttgcct 45423608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 21 - 164
Target Start/End: Complemental strand, 50905724 - 50905581
Alignment:
Q  21 gtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtgg 120  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||  ||    
T  50905724 gtttttggtaaataagatttagatattataattataggtgatagaaaataattttttcctacaaaaaataactcatttaactattaatttaaggattcgg 50905625  T
Q  121 tgtaccaatacactcaagttgttgggtgtaccatataatttgcc 164  Q
    ||||||||||||||||| ||||||||||||||||| || |||||    
T  50905624 tgtaccaatacactcaaattgttgggtgtaccatagaacttgcc 50905581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 22 - 164
Target Start/End: Original strand, 39190821 - 39190963
Alignment:
Q  22 tttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtggt 121  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||| || ||||    
T  39190821 tttttggtaaataagatttagttattataattataggtgatagaaaataatattttcctacaaaaaataactcatttaactattaatttaagaatttggt 39190920  T
Q  122 gtaccaatacactcaagttgttgggtgtaccatataatttgcc 164  Q
    |||||||||||||||| ||||||| ||||||||| || |||||    
T  39190921 gtaccaatacactcaaattgttggatgtaccatagaacttgcc 39190963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 20 - 164
Target Start/End: Original strand, 922104 - 922248
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    |||||||| ||||||||||||||||||| ||||||||||||||  ||||||       ||||||||||||||||||||||||||||||||||||||| ||    
T  922104 cgtttttgttaaataagatttagttattctaattataggtgatgaaaaatatttttttcctacaaaaaataactcatttaactattaatttaaggatttg 922203  T
Q  120 gtgtaccaatacactcaagttgttgggtgtaccatataatttgcc 164  Q
    |||||||||||||||||| ||||||||||||||||| ||||||||    
T  922204 gtgtaccaatacactcaaattgttgggtgtaccatagaatttgcc 922248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 20 - 164
Target Start/End: Original strand, 5956789 - 5956933
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||  ||  |    
T  5956789 cgtttttggtaaataagatttaattattataattataggtgatagaaaatatttttttcctacaaaaaataactcatttaactattaatttaaaaattcg 5956888  T
Q  120 gtgtaccaatacactcaagttgttgggtgtaccatataatttgcc 164  Q
    ||||||||||||||| || ||||||||||||||||||||||||||    
T  5956889 gtgtaccaatacacttaaattgttgggtgtaccatataatttgcc 5956933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 20 - 167
Target Start/End: Original strand, 38262396 - 38262543
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||| ||||||||||| || ||    
T  38262396 cgtttttggtaaataagatttagttattataattataggtgatagaaaataattttttcctacaaaaaataactcatttaacaattaatttaagaatttg 38262495  T
Q  120 gtgtaccaatacactcaagttgttgggtgtaccatataatttgcctat 167  Q
    |||||||||||||||||| |||||  |||||||||| || ||||||||    
T  38262496 gtgtaccaatacactcaaattgttaagtgtaccatagaacttgcctat 38262543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 20 - 167
Target Start/End: Complemental strand, 41073413 - 41073267
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||       |||||||||||||| |||||||||||||||||||||||| |     
T  41073413 cgtttttggtaaataagatttagttattataattataggtgatagaaa-taattttttcctacaaaaaataattcatttaactattaatttaaggatttt 41073315  T
Q  120 gtgtaccaatacactcaagttgttgggtgtaccatataatttgcctat 167  Q
    |||||||||||||||||| | ||||||||||||||| |||||||||||    
T  41073314 gtgtaccaatacactcaaatggttgggtgtaccatagaatttgcctat 41073267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 23 - 155
Target Start/End: Complemental strand, 51519921 - 51519791
Alignment:
Q  23 ttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtggtg 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||| || |||||    
T  51519921 ttttggtaaataagatttagttattataattataggtgatagaaaataatttt--cctacaaaaaataactcatttaactattaatttaagaatttggtg 51519824  T
Q  123 taccaatacactcaagttgttgggtgtaccata 155  Q
    ||||||||||||||| |||||||||||||||||    
T  51519823 taccaatacactcaaattgttgggtgtaccata 51519791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 21 - 167
Target Start/End: Original strand, 46770995 - 46771141
Alignment:
Q  21 gtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtgg 120  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||       || |||||||||||||||||||||||||||||||||||| |||    
T  46770995 gtttttggtaaataagatttagttattataattacaggtgatagaaaataattttttcccacaaaaaataactcatttaactattaatttaaggatttgg 46771094  T
Q  121 tgtaccaatacactcaagttgttgggtgtaccatataatttgcctat 167  Q
    | ||||||||||||||| ||||| ||||||||||| || ||||||||    
T  46771095 tataccaatacactcaaattgttaggtgtaccatagaacttgcctat 46771141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 20 - 165
Target Start/End: Complemental strand, 35305295 - 35305150
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    |||||||||||||||||||||||||||| ||||||||||||||  ||||||       |||||||||||||||| ||||||||||||||||||| || ||    
T  35305295 cgtttttggtaaataagatttagttattctaattataggtgatgaaaaatatttttttcctacaaaaaataacttatttaactattaatttaagaatttg 35305196  T
Q  120 gtgtaccaatacactcaagttgttgggtgtaccatataatttgcct 165  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||    
T  35305195 gtgtaccaatacactcaaattgttgggtgtaccatagaatttgcct 35305150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 24 - 161
Target Start/End: Original strand, 51781370 - 51781507
Alignment:
Q  24 tttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtggtgt 123  Q
    |||||| |||||||||||||||||||||| |||||||||||||||||       ||||||||||||||||||||||||||||||||||||||| ||||||    
T  51781370 tttggtgaataagatttagttattataatcataggtgatagaaaataattttttcctacaaaaaataactcatttaactattaatttaaggatttggtgt 51781469  T
Q  124 accaatacactcaagttgttgggtgtaccatataattt 161  Q
    |||||||||||||| || |||||||||||||| |||||    
T  51781470 accaatacactcaaattattgggtgtaccatagaattt 51781507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 20 - 164
Target Start/End: Complemental strand, 37498887 - 37498744
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||       | |||||||||||||| ||||||||||||||||||| || ||    
T  37498887 cgtttttggtaaataagatttagttattataattataggtgatagaaaatatttttt-cttacaaaaaataacttatttaactattaatttaagaatttg 37498789  T
Q  120 gtgtaccaatacactcaagttgttgggtgtaccatataatttgcc 164  Q
    |||||||||||||||||| ||||||| ||||||||| ||||||||    
T  37498788 gtgtaccaatacactcaaattgttggatgtaccatagaatttgcc 37498744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 20 - 166
Target Start/End: Complemental strand, 52303157 - 52303011
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||       |||| ||||||||||||||||||||||||||||||| || ||    
T  52303157 cgtttttggtaaataagatttagttattataataataggtgatagaaaatatttttttcctataaaaaataactcatttaactattaatttaagaatttg 52303058  T
Q  120 gtgtaccaatacactcaagttgttgggtgtaccatataatttgccta 166  Q
     ||||||||||||||||| || ||||||||| |||| ||||||||||    
T  52303057 atgtaccaatacactcaaattattgggtgtatcatagaatttgccta 52303011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 23 - 165
Target Start/End: Complemental strand, 16482716 - 16482575
Alignment:
Q  23 ttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtggtg 122  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||       ||||||||||||||||||||||||||||||||||||||| |||||    
T  16482716 ttttggtgaataagatttagttattataatcataggtgatagaaaataattttt-cctacaaaaaataactcatttaactattaatttaaggatttggtg 16482618  T
Q  123 taccaatacactcaagttgttgggtgtaccatataatttgcct 165  Q
    |||||||||||| || || |||||||||||||| |||||||||    
T  16482617 taccaatacacttaaattattgggtgtaccatagaatttgcct 16482575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 20 - 164
Target Start/End: Original strand, 39971531 - 39971675
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||| || ||    
T  39971531 cgtttttggtaaataagatttagttattataattataggtgatagaaaataattttttcctacaaaaaataactcatttaactattaatttaagaatttg 39971630  T
Q  120 gtgtaccaatacactcaagttgttgggtgtaccatataatttgcc 164  Q
    || ||||||||||||||| || ||||  |||||||| || |||||    
T  39971631 gtataccaatacactcaaattattggacgtaccatagaacttgcc 39971675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 23 - 162
Target Start/End: Complemental strand, 51985075 - 51984936
Alignment:
Q  23 ttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtggtg 122  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||       ||||||||||||||||||||||||||||||||||||||| || ||    
T  51985075 ttttggtgaataagatttagttattataatcataggtgatagaaaataattttttcctacaaaaaataactcatttaactattaatttaaggatttgatg 51984976  T
Q  123 taccaatacactcaagttgttgggtgtaccatataatttg 162  Q
    ||||||||||||||| || ||| |||||||||| ||||||    
T  51984975 taccaatacactcaaattattgagtgtaccatagaatttg 51984936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 22 - 164
Target Start/End: Original strand, 8461791 - 8461932
Alignment:
Q  22 tttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtggt 121  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| ||       ||||||||||||||||||||||||||||||||||||||| ||||    
T  8461791 tttttggtaaataagatgtagttattataattataggtgatagaaa-taattttttcctacaaaaaataactcatttaactattaatttaaggatttggt 8461889  T
Q  122 gtaccaatacactcaagttgttgggtgtaccatataatttgcc 164  Q
    |||||||||||||||| | ||||| ||||||||| || |||||    
T  8461890 gtaccaatacactcaaatggttggatgtaccatagaagttgcc 8461932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 20 - 151
Target Start/End: Original strand, 29106626 - 29106760
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||| ||| ||    
T  29106626 cgtttttggtaaataagatttagttattataattataggtgatagaaaataattttttcctacaaaaaataactcatttaactattaatttaaagatttg 29106725  T
Q  120 gtgtac---caatacactcaagttgttgggtgtac 151  Q
    ||||||   |||||||||||| ||||||| |||||    
T  29106726 gtgtaccagcaatacactcaaattgttggctgtac 29106760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 38 - 165
Target Start/End: Complemental strand, 28493936 - 28493809
Alignment:
Q  38 tttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtggtgtaccaatacactcaa 137  Q
    |||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| ||    
T  28493936 tttagttattataattataggtgatagaaaatatttttttcctacaaaaaataactcatttaactattaatttaaggatttggtgtaacaatacacttaa 28493837  T
Q  138 gttgttgggtgtaccatataatttgcct 165  Q
     || |||||||||||||| |||||||||    
T  28493836 attattgggtgtaccatagaatttgcct 28493809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 20 - 155
Target Start/End: Original strand, 23459818 - 23459955
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactca--tttaactattaatttaaggatg 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||  ||||||||||||||||||| |     
T  23459818 cgtttttggtaaataagatttagttattataattataggtgatagaaaataattttttcctacaaaaaataactcatttttaactattaatttaagggtt 23459917  T
Q  118 tggtgtaccaatacactcaagttgttgggtgtaccata 155  Q
    || | ||||||||||||||| |||||||||||| ||||    
T  23459918 tgatataccaatacactcaaattgttgggtgtatcata 23459955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 47 - 164
Target Start/End: Complemental strand, 27295175 - 27295058
Alignment:
Q  47 tataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtggtgtaccaatacactcaagttgttggg 146  Q
    ||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||    
T  27295175 tataattataggtgatagaaaatatttttttcctacaaaaaataactcatttaactattaatttaaagatttggtgtaccaatacactcaaattgttggg 27295076  T
Q  147 tgtaccatataatttgcc 164  Q
    ||||||||| ||||||||    
T  27295075 tgtaccatagaatttgcc 27295058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 20 - 162
Target Start/End: Original strand, 11778898 - 11779040
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    ||||||| |||||||||||||| ||||||||||||||||||||||||||||        || ||||||||||  ||||||||||||||||||| ||| ||    
T  11778898 cgtttttagtaaataagatttaattattataattataggtgatagaaaataatttttctcttcaaaaaataaaacatttaactattaatttaatgatttg 11778997  T
Q  120 gtgtaccaatacactcaagttgttgggtgtaccatataatttg 162  Q
     ||||||||||||||||| |  |||||||||||||||||||||    
T  11778998 ttgtaccaatacactcaaatctttgggtgtaccatataatttg 11779040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 31 - 161
Target Start/End: Original strand, 26102746 - 26102876
Alignment:
Q  31 aataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtggtgtaccaata 130  Q
    |||||||||||||||||||||| |||| ||||||||||||       ||| ||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  26102746 aataagatttagttattataatcatagttgatagaaaataattttttccttcaaaaaataactcatttaactattaatttaaggatttggtgtatcaata 26102845  T
Q  131 cactcaagttgttgggtgtaccatataattt 161  Q
    |||| || || ||| |||||||||| |||||    
T  26102846 cacttaaattattgagtgtaccatagaattt 26102876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 22 - 162
Target Start/End: Complemental strand, 2247209 - 2247069
Alignment:
Q  22 tttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtggt 121  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||||        || ||||||||| | ||||||||||||||||||| ||| ||||    
T  2247209 tttttgataaataagatttaattattataattataggtgatagaaaataatttttctcttcaaaaaatagcacatttaactattaatttaatgatttggt 2247110  T
Q  122 gtaccaatacactcaagttgttgggtgtaccatataatttg 162  Q
    |||||||||||||||| |  || ||||||||||| ||||||    
T  2247109 gtaccaatacactcaaatctttaggtgtaccatagaatttg 2247069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 20 - 160
Target Start/End: Complemental strand, 52260957 - 52260817
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| |        || ||||| ||||| ||||||||||||||||||  ||| ||    
T  52260957 cgtttttggtaaataagatttaattattataattataggtgatagaaaacaatttttatcttcaaaagataacacatttaactattaatttattgatttg 52260858  T
Q  120 gtgtaccaatacactcaagttgttgggtgtaccatataatt 160  Q
    ||||||||||||| |||| |  ||| |||||||||||||||    
T  52260857 gtgtaccaatacattcaattctttgagtgtaccatataatt 52260817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 78 - 164
Target Start/End: Complemental strand, 18641974 - 18641888
Alignment:
Q  78 cctacaaaaaataactcatttaactattaatttaaggatgtggtgtaccaatacactcaagttgttgggtgtaccatataatttgcc 164  Q
    ||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| |||||| |||||||||| || |||||    
T  18641974 cctacaaaaaataactcatttaactattaatttaaggatttagtgtaccaatacactcaaattgttgagtgtaccatagaacttgcc 18641888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 21 - 136
Target Start/End: Original strand, 50239497 - 50239612
Alignment:
Q  21 gtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtgg 120  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||||||        || ||||||||||| ||||||||||||||||||| ||| | |    
T  50239497 gtttttgataaataagatttaattattataattataggtgatagaaaataatttttctcttcaaaaaataacacatttaactattaatttaatgatttag 50239596  T
Q  121 tgtaccaatacactca 136  Q
    ||||||||||||||||    
T  50239597 tgtaccaatacactca 50239612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 20 - 166
Target Start/End: Complemental strand, 9167017 - 9166871
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    |||||||||| ||||||||||| ||||||||||| ||||  |||||||| |         | ||||||||||| ||||||||||||||||||  ||| ||    
T  9167017 cgtttttggtgaataagatttaattattataattctaggcaatagaaaacaatttttctattcaaaaaataacacatttaactattaatttattgatttg 9166918  T
Q  120 gtgtaccaatacactcaagttgttgggtgtaccatataatttgccta 166  Q
    |||||||||||||||||| || |||||||||| ||||||||||||||    
T  9166917 gtgtaccaatacactcaaatttttgggtgtactatataatttgccta 9166871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 20 - 164
Target Start/End: Original strand, 632910 - 633054
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    |||||||||| ||||||||||| |||||||||||||||||||| ||||| |        || ||||||||||| |||||||||||||||||   |||  |    
T  632910 cgtttttggttaataagatttaattattataattataggtgatggaaaacaatttttctcttcaaaaaataacacatttaactattaatttgttgattgg 633009  T
Q  120 gtgtaccaatacactcaagttgttgggtgtaccatataatttgcc 164  Q
    |||||||||||||||||| || ||| |||||||||| ||||||||    
T  633010 gtgtaccaatacactcaaatttttgagtgtaccatagaatttgcc 633054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 20 - 111
Target Start/End: Complemental strand, 43306671 - 43306582
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaattta 111  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||||||       ||||||||||||||||||||||||||||||||||    
T  43306671 cgtttttggtaaataagatttagttatta--attataggtgatagaaaataatttattcctacaaaaaataactcatttaactattaattta 43306582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 20 - 100
Target Start/End: Complemental strand, 45673459 - 45673379
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  45673459 cgtttttggtaaataagatttagttattataattataggtgatagaaaataattttttcctacaaaaaataactcatttaa 45673379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 20 - 155
Target Start/End: Original strand, 6520247 - 6520382
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    |||||||||||||||| ||||||||| ||||||||||||||||||||||||       |    ||||||||| ||||||||||||||||||||  ||  |    
T  6520247 cgtttttggtaaataaaatttagttactataattataggtgatagaaaatattttttcctataaaaaaataattcatttaactattaatttaaaaattcg 6520346  T
Q  120 gtgtaccaatacactcaagttgttgggtgtaccata 155  Q
     ||||||||||||||||| ||||||| |||||||||    
T  6520347 atgtaccaatacactcaaattgttggatgtaccata 6520382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 20 - 162
Target Start/End: Original strand, 26011204 - 26011346
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    |||||||||| ||||||||||| |||||||||||||||||||| ||||| |        || ||||||||||| |||||||||||||||||   |||  |    
T  26011204 cgtttttggttaataagatttaattattataattataggtgatggaaaacaatttttctcttcaaaaaataacacatttaactattaatttgttgattgg 26011303  T
Q  120 gtgtaccaatacactcaagttgttgggtgtaccatataatttg 162  Q
    ||||| |||||||||||| || |||||||||||||| ||||||    
T  26011304 gtgtatcaatacactcaaatttttgggtgtaccataaaatttg 26011346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 21 - 166
Target Start/End: Original strand, 28791631 - 28791776
Alignment:
Q  21 gtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtgg 120  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||||| |        || ||||||||||| |||||||||||||||||   ||  |||    
T  28791631 gtttttggtaaataagatttaattattataattgtaggtgatagaaaacaatttttctcttcaaaaaataacacatttaactattaatttgttgacttgg 28791730  T
Q  121 tgtaccaatacactcaagttgttgggtgtaccatataatttgccta 166  Q
    ||||||||||||| ||| || ||| ||||||| || ||||||||||    
T  28791731 tgtaccaatacacccaaatttttgagtgtaccgtaaaatttgccta 28791776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 20 - 133
Target Start/End: Complemental strand, 35910306 - 35910193
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| |        || ||||||||||| ||||||||||||||||||  ||  ||    
T  35910306 cgtttttggtaaataagatttaattattataattataggtgatagaaaacaatttttctcttcaaaaaataacacatttaactattaatttattgacttg 35910207  T
Q  120 gtgtaccaatacac 133  Q
    ||||||||||||||    
T  35910206 gtgtaccaatacac 35910193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 21 - 165
Target Start/End: Complemental strand, 23304550 - 23304406
Alignment:
Q  21 gtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtgg 120  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||||| |        ||  |||||||||| ||||||||||||||||||| ||| | |    
T  23304550 gtttttgataaataagatttaattattataattataggtgatagaaaacaatttttctcttaaaaaaataacacatttaactattaatttaatgattttg 23304451  T
Q  121 tgtaccaatacactcaagttgttgggtgtaccatataatttgcct 165  Q
    |||||||||||||||   |  |||||||||||||| | |||||||    
T  23304450 tgtaccaatacactcgtatctttgggtgtaccatagattttgcct 23304406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 20 - 164
Target Start/End: Original strand, 48616710 - 48616853
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    |||||||||| ||||||||||| |||||||||||||||||||| ||||| |        || |||||| |||| ||||||||||||||||||  |||  |    
T  48616710 cgtttttggttaataagatttaattattataattataggtgatggaaaacaatttttctcttcaaaaa-taacacatttaactattaatttattgattgg 48616808  T
Q  120 gtgtaccaatacactcaagttgttgggtgtaccatataatttgcc 164  Q
    |||||||||||||||||| || ||| |||||||||| ||||||||    
T  48616809 gtgtaccaatacactcaaatttttgagtgtaccatagaatttgcc 48616853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 78 - 166
Target Start/End: Complemental strand, 23056851 - 23056763
Alignment:
Q  78 cctacaaaaaataactcatttaactattaatttaaggatgtggtgtaccaatacactcaagttgttgggtgtaccatataatttgccta 166  Q
    |||||||||||||||||||||||||||||||||||  ||  |||||||||||||||| || || |||| ||||||||||||||| ||||    
T  23056851 cctacaaaaaataactcatttaactattaatttaaaaattcggtgtaccaatacacttaaattattggatgtaccatataatttaccta 23056763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 78 - 132
Target Start/End: Original strand, 44246318 - 44246372
Alignment:
Q  78 cctacaaaaaataactcatttaactattaatttaaggatgtggtgtaccaataca 132  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  44246318 cctacaaaaaataactcatttaactattaatttaaggatttggtgtaccaataca 44246372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 20 - 162
Target Start/End: Complemental strand, 51184186 - 51184044
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaa-taactcatttaactattaatttaaggatgt 118  Q
    |||||||| ||||||||||||| |||||||| |||||||||||||||||||        ||  |||||| |||  ||||||||||||||||||| ||| |    
T  51184186 cgtttttgctaaataagatttaattattata-ttataggtgatagaaaataatttttctctttaaaaaaataaaacatttaactattaatttaatgattt 51184088  T
Q  119 ggtgtaccaatacactcaagttgttgggtgtaccatataatttg 162  Q
    | ||||||||||||||||| |  |||||||||||||| ||||||    
T  51184087 gttgtaccaatacactcaaatctttgggtgtaccatagaatttg 51184044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 20 - 164
Target Start/End: Complemental strand, 51369461 - 51369329
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    |||||||||||||||||||||||||||||||||||||  |||||||||||        |||||||||||||||||            |||||||||| ||    
T  51369461 cgtttttggtaaataagatttagttattataattataaatgatagaaaatgtttttttcctacaaaaaataactc------------atttaaggatttg 51369374  T
Q  120 gtgtaccaatacactcaagttgttgggtgtaccatataatttgcc 164  Q
    ||||| |||||||||||| |||||| |||||||||| ||||||||    
T  51369373 gtgtatcaatacactcaaattgttgagtgtaccatagaatttgcc 51369329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 85 - 174
Target Start/End: Complemental strand, 34256532 - 34256443
Alignment:
Q  85 aaaataactcatttaactattaatttaaggatgtggtgtaccaatacactcaagttgttgggtgtaccatataatttgcctatcaaatta 174  Q
    |||||||||| ||||| |||||||||||  || ||||||||| |||||||||| ||||||||||||||||| ||||||||| | ||||||    
T  34256532 aaaataactcgtttaattattaatttaataatttggtgtaccgatacactcaaattgttgggtgtaccatagaatttgccttttaaatta 34256443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 20 - 161
Target Start/End: Complemental strand, 27352991 - 27352850
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    |||||||||||||||||||||| |||||| |||||||||||||| ||||||        || |||||| |||| |||||||||||||||| ||  || |     
T  27352991 cgtttttggtaaataagatttaattattacaattataggtgatataaaataatttttctcttcaaaaactaacacatttaactattaattcaataatttt 27352892  T
Q  120 gtgtaccaatacactcaagttgttgggtgtaccatataattt 161  Q
    ||||| |||||||||||| |  |||| ||||||||| |||||    
T  27352891 gtgtatcaatacactcaaatctttggatgtaccatagaattt 27352850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 85 - 165
Target Start/End: Original strand, 33098982 - 33099062
Alignment:
Q  85 aaaataactcatttaactattaatttaaggatgtggtgtaccaatacactcaagttgttgggtgtaccatataatttgcct 165  Q
    |||||||| ||||||||||||||||||  ||| | |||||||||||||||||| ||||||  |||||||||||||||||||    
T  33098982 aaaataacacatttaactattaatttattgattttgtgtaccaatacactcaaattgttgaatgtaccatataatttgcct 33099062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 20 - 161
Target Start/End: Complemental strand, 33906463 - 33906322
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    |||||||||| ||||||||||| |||||||||||||||||||| ||||| |        || ||||||||||| |||||||||||||||||   |||       
T  33906463 cgtttttggttaataagatttaattattataattataggtgatggaaaacaatttttctcttcaaaaaataacacatttaactattaatttgttgattga 33906364  T
Q  120 gtgtaccaatacactcaagttgttgggtgtaccatataattt 161  Q
    ||||||||||| |||||| || || | |||||||||||||||    
T  33906363 gtgtaccaatatactcaaatttttagatgtaccatataattt 33906322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 22 - 165
Target Start/End: Original strand, 35874202 - 35874346
Alignment:
Q  22 tttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg-g 120  Q
    |||||| | ||||||||||||||||||||||||||  ||||| ||||||        || ||||||| |||| |||||||||||||||||| || ||| |    
T  35874202 tttttgatgaataagatttagttattataattataaatgataaaaaataatatttttcttcaaaaaacaacttatttaactattaatttaaaga-gtgag 35874300  T
Q  121 tgtaccaatacactcaagt-tgttgggtgtaccatataatttgcct 165  Q
    ||||||||||||||||| | | |||||||||||||| |||||||||    
T  35874301 tgtaccaatacactcaaatatattgggtgtaccatagaatttgcct 35874346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 20 - 137
Target Start/End: Original strand, 36274979 - 36275096
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||         | ||||||||||| |||||||||| |||||||  ||| ||    
T  36274979 cgtttttggtaaataagatttaattattataattataggtgatagaaaataatttttcttttcaaaaaataacacatttaactactaatttattgatttg 36275078  T
Q  120 gtgtaccaatacactcaa 137  Q
    || ||  |||||||||||    
T  36275079 gtatattaatacactcaa 36275096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 20 - 164
Target Start/End: Complemental strand, 7122100 - 7121957
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    |||||||| ||||||||||||| |||||||||||||||||||||| |||||        |  ||||||| ||  ||||||||||||||||||| ||| ||    
T  7122100 cgtttttgctaaataagatttaattattataattataggtgatag-aaataatttttctcgtcaaaaaacaaaacatttaactattaatttaatgatttg 7122002  T
Q  120 gtgtaccaatacactcaagttgttgggtgtaccatataatttgcc 164  Q
     ||||||||||||||||| |  || ||| ||||||| ||||||||    
T  7122001 ttgtaccaatacactcaaatctttaggtataccatagaatttgcc 7121957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 22 - 165
Target Start/End: Complemental strand, 51056339 - 51056196
Alignment:
Q  22 tttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtggt 121  Q
    |||||| | ||||||||||||||||||||||||||  ||||| ||||||        || |||||||||||| |||||||||||||||||| || |||||    
T  51056339 tttttgatgaataagatttagttattataattataaatgataaaaaataatatttttcttcaaaaaataacttatttaactattaatttaaaga-gtggt 51056241  T
Q  122 gtaccaatacactcaagt-tgttgggtgtaccatataatttgcct 165  Q
    |||||  ||||||||| | | || ||||||||||| |||||||||    
T  51056240 gtaccggtacactcaaatatattaggtgtaccatagaatttgcct 51056196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 82 - 164
Target Start/End: Original strand, 42317149 - 42317231
Alignment:
Q  82 caaaaaataactcatttaactattaatttaaggatgtggtgtaccaatacactcaagttgttgggtgtaccatataatttgcc 164  Q
    ||||||||||| ||||||||||||||||||  ||| || |||||||||||||||||  | ||| |||||||||||||||||||    
T  42317149 caaaaaataacacatttaactattaatttattgatttgatgtaccaatacactcaaaattttgagtgtaccatataatttgcc 42317231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 21 - 134
Target Start/End: Original strand, 47719236 - 47719348
Alignment:
Q  21 gtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtgg 120  Q
    ||||||||||| ||||||||| |||||| |||||||||||||||||||||        || ||||||||||| || ||| |||||||||||| ||| ||     
T  47719236 gtttttggtaagtaagatttaattattacaattataggtgatagaaaataaattttctcttcaaaaaataacaca-ttacctattaatttaatgatttga 47719334  T
Q  121 tgtaccaatacact 134  Q
    ||||||||||||||    
T  47719335 tgtaccaatacact 47719348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 107
Target Start/End: Original strand, 10179135 - 10179222
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaa 107  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||||| |        || ||||||||||| ||||||||||||||    
T  10179135 cgtttttggtaaataagatttaattattataattatagatgatagaaaacaatttttctcttcaaaaaataacacatttaactattaa 10179222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 84 - 164
Target Start/End: Original strand, 44382342 - 44382423
Alignment:
Q  84 aaaaataactcatttaactattaatttaaggatgtggtgtaccaatacactcaagt-tgttgggtgtaccatataatttgcc 164  Q
    |||||||| |||||||||||| ||||||||| | |||||||||  ||||||||| | |||||||||||||||| ||||||||    
T  44382342 aaaaataattcatttaactataaatttaagggtctggtgtaccggtacactcaaatatgttgggtgtaccataaaatttgcc 44382423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 83 - 164
Target Start/End: Complemental strand, 44978950 - 44978869
Alignment:
Q  83 aaaaaataactcatttaactattaatttaaggatgtggtgtaccaatacactcaagttgttgggtgtaccatataatttgcc 164  Q
    |||||| ||||| ||||| |||||||||||  || |||||||||  ||||||||| ||||||||||||||||| ||||||||    
T  44978950 aaaaaaaaactcgtttaattattaatttaataatttggtgtaccggtacactcaaattgttgggtgtaccatagaatttgcc 44978869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 31 - 164
Target Start/End: Original strand, 6526700 - 6526835
Alignment:
Q  31 aataagatttagttattataattataggtgatagaaaat-annnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg-gtgtaccaa 128  Q
    |||||||||||||||||||||||||| |||||| ||||  |        |||||||||| |||||||||||||||||||||||||| ||| ||||| |      
T  6526700 aataagatttagttattataattataagtgataaaaaaacaatatttttctacaaaaaacaactcatttaactattaatttaagga-gtgagtgtatcgg 6526798  T
Q  129 tacactcaagt-tgttgggtgtaccatataatttgcc 164  Q
    ||||||||| | | |||||||||||||| ||||||||    
T  6526799 tacactcaaatatattgggtgtaccatagaatttgcc 6526835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 31 - 165
Target Start/End: Complemental strand, 44263781 - 44263645
Alignment:
Q  31 aataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaat-aactcatttaactattaatttaaggatgtggtgtaccaat 129  Q
    ||||||||||||||||||||||||||  ||||| ||||||        || |||||||  ||||||||||||||||||||||| ||    ||||| ||||    
T  44263781 aataagatttagttattataattataaatgataaaaaataatatttttcttcaaaaaaacaactcatttaactattaatttaaagagcgagtgtatcaat 44263682  T
Q  130 acactcaagt-tgttgggtgtaccatataatttgcct 165  Q
    |||||||| | | |||||||||||||| |||||||||    
T  44263681 acactcaaatatattgggtgtaccatagaatttgcct 44263645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 31 - 164
Target Start/End: Original strand, 477707 - 477841
Alignment:
Q  31 aataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg-gtgtaccaat 129  Q
    |||||||||||||||||| || ||||  ||||||||||||        || ||||||| |||||||||||| |||||||||| || ||| ||||||| ||    
T  477707 aataagatttagttattacaaatataaatgatagaaaataatatttttcttcaaaaaacaactcatttaaccattaatttaaaga-gtgagtgtaccgat 477805  T
Q  130 acactcaagt-tgttgggtgtaccatataatttgcc 164  Q
    |||||||| | | |||||||||||||| ||||||||    
T  477806 acactcaaatatattgggtgtaccatagaatttgcc 477841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 82 - 167
Target Start/End: Complemental strand, 21072857 - 21072773
Alignment:
Q  82 caaaaaataactcatttaactattaatttaaggatgtggtgtaccaatacactcaagt-tgttgggtgtaccatataatttgcctat 167  Q
    |||||||||||| |||||||||||||||||| || |||| ||||| ||||| |||| | | ||||||||||||||||||||||||||    
T  21072857 caaaaaataacttatttaactattaatttaaaga-gtgg-gtaccgatacagtcaaatgtattgggtgtaccatataatttgcctat 21072773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 82 - 166
Target Start/End: Original strand, 32144992 - 32145077
Alignment:
Q  82 caaaaaataactcatttaactattaatttaaggatgtggtgtaccaatacactc-aagttgttgggtgtaccatataatttgccta 166  Q
    ||||||||||||||||||||||| ||||||||||| || ||||||  ||||||| ||  ||||||||||||  || ||||||||||    
T  32144992 caaaaaataactcatttaactataaatttaaggatttgatgtaccggtacactcaaaaatgttgggtgtacggtagaatttgccta 32145077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 166
Target Start/End: Complemental strand, 38260945 - 38260800
Alignment:
Q  22 tttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtggt 121  Q
    |||||| | ||||||||||||||||||||||||||  ||||| ||||||        || ||||||| |||| |||||||||||||||||| ||   |||    
T  38260945 tttttgatgaataagatttagttattataattataaatgataaaaaataatatttttcttcaaaaaacaacttatttaactattaatttaaagagtgggt 38260846  T
Q  122 gtaccaatacactcaagt-tgttgggtgtaccatataatttgccta 166  Q
    |||||  ||||||||| | | || | ||||||||| ||||||||||    
T  38260845 gtaccggtacactcaaatatattagatgtaccatagaatttgccta 38260800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 83 - 164
Target Start/End: Original strand, 31075935 - 31076017
Alignment:
Q  83 aaaaaataactcatttaactattaatttaaggatgtggtgtaccaatacactcaagt-tgttgggtgtaccatataatttgcc 164  Q
    |||||||||||||||||| ||||||||||| ||   ||||||||  ||||||||| | | |||||||||||||| ||||||||    
T  31075935 aaaaaataactcatttaattattaatttaatgaatgggtgtaccggtacactcaaatatattgggtgtaccatagaatttgcc 31076017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 84 - 165
Target Start/End: Original strand, 46707671 - 46707753
Alignment:
Q  84 aaaaataactcatttaactattaatttaaggatgtggtgtaccaatacactcaagt-tgttgggtgtaccatataatttgcct 165  Q
    |||||||| |||||||||||| ||||||||| | |||||||||  ||||||||| | |||||| |||||| || |||||||||    
T  46707671 aaaaataattcatttaactataaatttaagggtctggtgtaccggtacactcaaatatgttggatgtaccgtagaatttgcct 46707753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 164
Target Start/End: Complemental strand, 12227265 - 12227121
Alignment:
Q  23 ttttggtaaataagatttagttattataattataggtgatagaaaata---nnnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    ||||||||||||||||||| |||||||||||||   ||||||||||||          | |  |||||| |||| |||||| ||||||||||| | | ||    
T  12227265 ttttggtaaataagatttaattattataattatcaatgatagaaaataattattttttcttcaaaaaaacaactaatttaattattaatttaatgctttg 12227166  T
Q  120 gtgtaccaatacactcaagttgttgggtgtaccatataatttgcc 164  Q
    ||||||   |||||||||  |||||||||||||||| ||||||||    
T  12227165 gtgtactggtacactcaaaatgttgggtgtaccatagaatttgcc 12227121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 82 - 167
Target Start/End: Complemental strand, 14077411 - 14077326
Alignment:
Q  82 caaaaaataactcatttaactattaatttaaggatgtggtgtaccaatacactcaagttgttgggtgtaccatataatttgcctat 167  Q
    ||||||| |||| |||||| ||||||||||| | | |||||||||  |||||||||  |||||| |||||| || |||||||||||    
T  14077411 caaaaaacaactaatttaattattaatttaatgctttggtgtaccggtacactcaaaatgttggatgtaccgtagaatttgcctat 14077326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 165
Target Start/End: Complemental strand, 24381460 - 24381315
Alignment:
Q  22 tttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaa-taactcatttaactattaatttaaggatgtg- 119  Q
    |||||| | ||||| |||||||||||||||||||| |||||| |||| |        || ||||||| |||||||||||||||||||||||| || |||     
T  24381460 tttttgatgaataaaatttagttattataattataagtgataaaaaacaatatttttcttcaaaaaaataactcatttaactattaatttaaaga-gtga 24381362  T
Q  120 gtgtaccaatacactcaagt-tgttgggtgtaccatataatttgcct 165  Q
    |||||||  ||||||||| | | || ||||||||||| |||||||||    
T  24381361 gtgtaccggtacactcaaatctattaggtgtaccatagaatttgcct 24381315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 164
Target Start/End: Original strand, 26424166 - 26424247
Alignment:
Q  83 aaaaaataactcatttaactattaatttaaggatgtggtgtaccaatacactcaagttgttgggtgtaccatataatttgcc 164  Q
    |||||| ||||||||||| |||||||||||  || | |||||||  ||||||||| |||||| || ||||||| ||||||||    
T  26424166 aaaaaacaactcatttaattattaatttaataatttagtgtaccggtacactcaaattgttgagtataccatagaatttgcc 26424247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 70
Target Start/End: Original strand, 31890340 - 31890389
Alignment:
Q  21 gtttttggtaaataagatttagttattataattataggtgatagaaaata 70  Q
    ||||||||||||||||||||||||||||||| ||||| || || ||||||    
T  31890340 gtttttggtaaataagatttagttattataactatagatgttataaaata 31890389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 82 - 154
Target Start/End: Original strand, 50631916 - 50631989
Alignment:
Q  82 caaaaaat-aactcatttaactattaatttaaggatgtggtgtaccaatacactcaagttgttgggtgtaccat 154  Q
    |||||||| ||||||||||| ||||||||||| | | |||||||||  ||||||||| || |||||||||||||    
T  50631916 caaaaaatcaactcatttaattattaatttaacgctttggtgtaccggtacactcaaattattgggtgtaccat 50631989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 112
Target Start/End: Complemental strand, 52180377 - 52180287
Alignment:
Q  22 tttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaa 112  Q
    |||||| | ||||||||||||||||||||||||||  ||||| ||||||        || ||||||| |||| ||||||||||||||||||    
T  52180377 tttttgatgaataagatttagttattataattataaatgataaaaaataatatttttcttcaaaaaacaacttatttaactattaatttaa 52180287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 130
Target Start/End: Complemental strand, 2620773 - 2620680
Alignment:
Q  37 atttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtggtgtaccaata 130  Q
    ||||| ||||||||||||||||||||| |||| |        || ||||||||||| ||||||||||||||||||  ||| | |||||||||||    
T  2620773 atttaattattataattataggtgatataaaacaatttttctcttcaaaaaataacacatttaactattaatttattgatttagtgtaccaata 2620680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 53
Target Start/End: Complemental strand, 18642011 - 18641979
Alignment:
Q  21 gtttttggtaaataagatttagttattataatt 53  Q
    |||||||||||||||||||||||||||||||||    
T  18642011 gtttttggtaaataagatttagttattataatt 18641979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 137
Target Start/End: Original strand, 29953926 - 29953978
Alignment:
Q  85 aaaataactcatttaactattaatttaaggatgtggtgtaccaatacactcaa 137  Q
    |||| ||||||||||||||||||| ||||||| |||||||||  |||||||||    
T  29953926 aaaaaaactcatttaactattaatataaggatttggtgtaccggtacactcaa 29953978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 82 - 137
Target Start/End: Complemental strand, 17525519 - 17525464
Alignment:
Q  82 caaaaaataactcatttaactattaatttaaggatgtggtgtaccaatacactcaa 137  Q
    ||||||||||||||||||||||| ||||||||| | || ||||||  |||||||||    
T  17525519 caaaaaataactcatttaactataaatttaagggtttgatgtaccggtacactcaa 17525464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 82 - 164
Target Start/End: Original strand, 26308526 - 26308609
Alignment:
Q  82 caaaaaataactcatttaactattaatttaaggatgtggtgtaccaatacactcaagt-tgttgggtgtaccatataatttgcc 164  Q
    ||||||| ||||||||||| ||| ||||||||  | |||||||||  ||||||||| | |||||||||||| ||| ||||||||    
T  26308526 caaaaaacaactcatttaattataaatttaagagtttggtgtaccggtacactcaaatatgttgggtgtacgatagaatttgcc 26308609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 23 - 70
Target Start/End: Complemental strand, 33082131 - 33082084
Alignment:
Q  23 ttttggtaaataagatttagttattataattataggtgatagaaaata 70  Q
    ||||||||||||||||||| |||||||||||||   ||||||||||||    
T  33082131 ttttggtaaataagatttaattattataattatcaatgatagaaaata 33082084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 23 - 70
Target Start/End: Original strand, 42275600 - 42275647
Alignment:
Q  23 ttttggtaaataagatttagttattataattataggtgatagaaaata 70  Q
    ||||| ||||||||||||| ||||||||||||||| ||||| ||||||    
T  42275600 ttttgataaataagatttaattattataattatagatgataaaaaata 42275647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 23 - 164
Target Start/End: Complemental strand, 43537019 - 43536877
Alignment:
Q  23 ttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnn--cctacaaaaaataactcatttaactattaatttaaggatgtgg 120  Q
    ||||||||||||||||||| ||||||||||| |   ||||||||||||         ||| ||||||| ||   |||||| ||||| ||||| | | |||    
T  43537019 ttttggtaaataagatttaattattataattgtcaatgatagaaaataattatttttccttcaaaaaacaatcaatttaattattattttaatgtt-tgg 43536921  T
Q  121 tgtaccaatacactcaagttgttgggtgtaccatataatttgcc 164  Q
    ||||||  |||||||||  |||||||||||||||||||||||||    
T  43536920 tgtaccggtacactcaaaatgttgggtgtaccatataatttgcc 43536877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 90 - 165
Target Start/End: Complemental strand, 46918459 - 46918384
Alignment:
Q  90 aactcatttaactattaatttaaggatgtggtgtaccaatacactcaagttgttgggtgtaccatataatttgcct 165  Q
    ||||||||||| |||||||||||  || |||||||||| | || |||| || ||  ||||||||||||||||||||    
T  46918459 aactcatttaattattaatttaacaatttggtgtaccagtgcattcaaatttttaagtgtaccatataatttgcct 46918384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 82 - 113
Target Start/End: Original strand, 49616150 - 49616181
Alignment:
Q  82 caaaaaataactcatttaactattaatttaag 113  Q
    ||||||||||||||||||||||||||||||||    
T  49616150 caaaaaataactcatttaactattaatttaag 49616181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 82 - 164
Target Start/End: Original strand, 51787792 - 51787875
Alignment:
Q  82 caaaaaataactcatttaactattaatttaaggatgtggtgtaccaatacactcaagt-tgttgggtgtaccatataatttgcc 164  Q
    ||||||| ||||||||||||||||||||||| ||   ||||||||  ||||||||| | | |||| ||||||||| ||||||||    
T  51787792 caaaaaacaactcatttaactattaatttaaagaatgggtgtaccggtacactcaaatatattggatgtaccatagaatttgcc 51787875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 165
Target Start/End: Original strand, 5360540 - 5360609
Alignment:
Q  95 atttaactattaatttaaggatgtggtgtaccaatacactcaagttgttgggtgtaccatataatttgcct 165  Q
    |||||| ||||||||||| | | |||||||||  |||||||||  |||||||||||||||| |||||||||    
T  5360540 atttaattattaatttaatgtt-tggtgtaccggtacactcaaaatgttgggtgtaccatagaatttgcct 5360609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 164
Target Start/End: Original strand, 9223181 - 9223262
Alignment:
Q  83 aaaaaataactcatttaactattaatttaaggatgtggtgtaccaatacactcaagttg-ttgggtgtaccatataatttgcc 164  Q
    |||||||||||||||||  ||||||||| | ||| ||||||||| |||||| ||| ||  |||||||||||||| ||||||||    
T  9223181 aaaaaataactcatttat-tattaattttacgatttggtgtaccgatacacccaaatttattgggtgtaccatagaatttgcc 9223262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 165
Target Start/End: Complemental strand, 33082056 - 33081987
Alignment:
Q  95 atttaactattaatttaaggatgtggtgtaccaatacactcaagttgttgggtgtaccatataatttgcct 165  Q
    |||||| |||||||||||  || |||||||||  |||||||||  |||||||||||||||| |||||||||    
T  33082056 atttaattattaatttaat-atttggtgtaccggtacactcaaaatgttgggtgtaccatagaatttgcct 33081987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 166
Target Start/End: Complemental strand, 45318016 - 45317934
Alignment:
Q  84 aaaaataactcatttaactattaatttaaggatgtggtgtaccaatacactcaagttgttgggtgtaccatataatttgccta 166  Q
    ||||| ||| ||||||||||||||| |||| || |||||||||  |||| |||| || ||| |||||||||| | ||||||||    
T  45318016 aaaaaaaacccatttaactattaatataagtatttggtgtaccggtacattcaaattattgagtgtaccatagattttgccta 45317934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 67
Target Start/End: Complemental strand, 45318079 - 45318033
Alignment:
Q  21 gtttttggtaaataagatttagttattataattataggtgatagaaa 67  Q
    ||||||||||| ||||||||| ||||||||||||||  |||||||||    
T  45318079 gtttttggtaattaagatttaattattataattataaatgatagaaa 45318033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 167
Target Start/End: Complemental strand, 48760208 - 48760122
Alignment:
Q  82 caaaaaataactcatttaactattaatttaaggatgtggtgtaccaatacactcaagt-tgttgggtgtaccatataatttgcctat 167  Q
    ||||||| | ||||||||||||| ||||||| ||  | |||||| ||||||||||| | |  ||||||||||||| |||||||||||    
T  48760208 caaaaaacagctcatttaactatgaatttaaagagttagtgtactaatacactcaaatatagtgggtgtaccatagaatttgcctat 48760122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 51978119 - 51978169
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaata 70  Q
    |||||||| ||||| | ||||| ||||||||||||||||||||| ||||||    
T  51978119 cgtttttgataaatgatatttaattattataattataggtgatataaaata 51978169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 83 - 167
Target Start/End: Complemental strand, 25493579 - 25493495
Alignment:
Q  83 aaaaaataactcatttaactattaatttaaggatgtggtgtaccaatacactc-aagttgttgggtgtaccatataatttgcctat 167  Q
    |||||| ||||||||||  ||||||||| | ||| |||||||||||||||| | || || |||| ||||||||| |||||||||||    
T  25493579 aaaaaacaactcatttat-tattaattttacgatttggtgtaccaatacacccaaatttattggatgtaccatagaatttgcctat 25493495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 120 - 161
Target Start/End: Original strand, 26830255 - 26830296
Alignment:
Q  120 gtgtaccaatacactcaagttgttgggtgtaccatataattt 161  Q
    |||||||||||||||||| || || |||||||||||||||||    
T  26830255 gtgtaccaatacactcaaattattaggtgtaccatataattt 26830296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 31 - 68
Target Start/End: Complemental strand, 28624611 - 28624574
Alignment:
Q  31 aataagatttagttattataattataggtgatagaaaa 68  Q
    |||||||||||||||||||||||||| |||||| ||||    
T  28624611 aataagatttagttattataattataagtgataaaaaa 28624574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 82 - 162
Target Start/End: Original strand, 30263906 - 30263987
Alignment:
Q  82 caaaaaataactcatttaactattaatttaaggatgtggtgtaccaatacactcaagt-tgttgggtgtaccatataatttg 162  Q
    ||||||| ||||||||||||||||||||||| ||  |||||||    ||||||||| | | |||||||||||||| ||||||    
T  30263906 caaaaaacaactcatttaactattaatttaaagaattggtgtatgggtacactcaaatatattgggtgtaccatagaatttg 30263987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #93
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 24 - 53
Target Start/End: Complemental strand, 32990036 - 32990007
Alignment:
Q  24 tttggtaaataagatttagttattataatt 53  Q
    ||||||||||||||||||||||||||||||    
T  32990036 tttggtaaataagatttagttattataatt 32990007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #94
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 129 - 170
Target Start/End: Original strand, 35913003 - 35913044
Alignment:
Q  129 tacactcaagttgttgggtgtaccatataatttgcctatcaa 170  Q
    |||||||||  |||||||||||||||| ||||||||||||||    
T  35913003 tacactcaaaatgttgggtgtaccatagaatttgcctatcaa 35913044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #95
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 83 - 167
Target Start/End: Complemental strand, 46872450 - 46872366
Alignment:
Q  83 aaaaaataactcatttaactattaatttaaggatgtggtgtaccaatacactcaagttg-ttgggtgtaccatataatttgcctat 167  Q
    |||||||||||||||||  ||||||||| | ||  |||||||||||||||| ||| ||  ||||||||| |||| |||||||||||    
T  46872450 aaaaaataactcatttat-tattaattttacgacttggtgtaccaatacacccaaatttattgggtgtatcatagaatttgcctat 46872366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #96
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 166
Target Start/End: Original strand, 7426986 - 7427069
Alignment:
Q  83 aaaaaataactcatttaactattaatttaaggatgtggtgtaccaatacactcaagttg-ttgggtgtaccatataatttgccta 166  Q
    |||||| ||||||||||  ||||||||| | ||| ||||||||| |||||| ||| ||  |||||||||||||| ||||||||||    
T  7426986 aaaaaacaactcatttat-tattaattttacgatttggtgtaccgatacacccaaatttattgggtgtaccatagaatttgccta 7427069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #97
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 165
Target Start/End: Original strand, 17554142 - 17554225
Alignment:
Q  83 aaaaaataactcatttaactattaatttaaggatgtg-gtgtaccaatacactcaagt-tgttgggtgtaccatataatttgcct 165  Q
    |||||| |||||||||||| |||||||||| || ||| |||||||  ||||||||| | | |||||||||||||| |||||||||    
T  17554142 aaaaaacaactcatttaaccattaatttaaaga-gtgagtgtaccggtacactcaaatatattgggtgtaccatagaatttgcct 17554225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #98
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 166
Target Start/End: Complemental strand, 33985993 - 33985909
Alignment:
Q  82 caaaaaataactcatttaactattaatttaaggatgtggtgtaccaatacactcaagttgttgggtgtaccatataatttgccta 166  Q
    ||||||| |||| |||||| |||||||||||  || ||||| |||| |||||||||  | |||  ||||||||| ||||||||||    
T  33985993 caaaaaacaactaatttaattattaatttaaatatttggtgcaccagtacactcaaaattttgaatgtaccataaaatttgccta 33985909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #99
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 165
Target Start/End: Complemental strand, 38717837 - 38717753
Alignment:
Q  82 caaaaaataactcatttaactattaatttaaggatgtggtgtaccaatacactcaagt-tgttgggtgtaccatataatttgcct 165  Q
    ||||||| ||||||||||||||| ||||||| ||  | |||||| | ||||||||| | |  ||||||||||||| |||||||||    
T  38717837 caaaaaacaactcatttaactatgaatttaaagagttagtgtactagtacactcaaatatagtgggtgtaccatagaatttgcct 38717753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #100
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 114
Target Start/End: Complemental strand, 45809526 - 45809494
Alignment:
Q  82 caaaaaataactcatttaactattaatttaagg 114  Q
    ||||||||||||||||||||||| |||||||||    
T  45809526 caaaaaataactcatttaactataaatttaagg 45809494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 94; Significance: 4e-46; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 20 - 166
Target Start/End: Original strand, 36871 - 37017
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    |||||||||||||||||||||||||||||||||||||||||||  ||||||        |||||||||||||||||||||||||||||||||||||| ||    
T  36871 cgtttttggtaaataagatttagttattataattataggtgatgaaaaatattttttttctacaaaaaataactcatttaactattaatttaaggatttg 36970  T
Q  120 gtgtaccaatacactcaagttgttgggtgtaccatataatttgccta 166  Q
    ||||| |||||||||||| |||||| |||||||||| ||||||||||    
T  36971 gtgtatcaatacactcaaattgttgagtgtaccatagaatttgccta 37017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 89; Significance: 4e-43; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 20 - 137
Target Start/End: Complemental strand, 48154 - 48037
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||| |||||||||||||||||||||||| ||    
T  48154 cgtttttggtaaataagatttagttattataattataggtgatagaaaatatttttttcctacaaaaaataaatcatttaactattaatttaaggatttg 48055  T
Q  120 gtgtaccaatacactcaa 137  Q
    ||||||||||||||||||    
T  48054 gtgtaccaatacactcaa 48037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0625 (Bit Score: 63; Significance: 1e-27; HSPs: 1)
Name: scaffold0625
Description:

Target: scaffold0625; HSP #1
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 21 - 164
Target Start/End: Original strand, 6526 - 6669
Alignment:
Q  21 gtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtgg 120  Q
    ||||||||||||| | ||||| ||||||||||||||||||||| ||||||        || |||||||||||  |||||||||||||||||  ||| |||    
T  6526 gtttttggtaaatgatatttaattattataattataggtgatataaaatattttttctcttcaaaaaataacatatttaactattaatttattgatttgg 6625  T
Q  121 tgtaccaatacactcaagttgttgggtgtaccatataatttgcc 164  Q
    ||||||||||||||||| || || ||||||||||| ||||||||    
T  6626 tgtaccaatacactcaaattttttggtgtaccatagaatttgcc 6669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0604 (Bit Score: 54; Significance: 3e-22; HSPs: 1)
Name: scaffold0604
Description:

Target: scaffold0604; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 20 - 162
Target Start/End: Complemental strand, 2164 - 2022
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    |||||||||| ||||||||||| |||||||||||||||||||| ||||| |        || ||||||||||  |||||||||||||||||   |||  |    
T  2164 cgtttttggttaataagatttaattattataattataggtgatggaaaacaatttttctcttcaaaaaataagacatttaactattaatttgttgattgg 2065  T
Q  120 gtgtaccaatacactcaagttgttgggtgtaccatataatttg 162  Q
    |||||||||||||||||| || ||| |||||||||| ||||||    
T  2064 gtgtaccaatacactcaaatttttgagtgtaccatagaatttg 2022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 54; Significance: 3e-22; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 20 - 154
Target Start/End: Complemental strand, 29389 - 29255
Alignment:
Q  20 cgtttttggtaaataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtg 119  Q
    |||||||||| ||||||||||| ||| |||||||||||||||| ||||| |        || ||||||||||| |||||||||||||||||   |||  |    
T  29389 cgtttttggttaataagatttaattagtataattataggtgatggaaaacaatttctctcttcaaaaaataacacatttaactattaatttgttgattgg 29290  T
Q  120 gtgtaccaatacactcaagttgttgggtgtaccat 154  Q
    |||||||||||||||||| || |||||||||||||    
T  29289 gtgtaccaatacactcaaatttttgggtgtaccat 29255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 31 - 164
Target Start/End: Original strand, 3302 - 3436
Alignment:
Q  31 aataagatttagttattataattataggtgatagaaaatannnnnnncctacaaaaaataactcatttaactattaatttaaggatgtggtgtaccaata 130  Q
    ||||||||||| ||||||||||||||  ||||| ||||||        || |||||||||||| |||||||||||||||||| ||   |||||||   ||    
T  3302 aataagatttatttattataattataaatgataaaaaataatatttttcttcaaaaaataacttatttaactattaatttaaagagtaggtgtactggta 3401  T
Q  131 cactcaagt-tgttgggtgtaccatataatttgcc 164  Q
    ||||||| | | |||||||||||||| ||||||||    
T  3402 cactcaaatatattgggtgtaccatagaatttgcc 3436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 81 - 165
Target Start/End: Original strand, 47898 - 47982
Alignment:
Q  81 acaaaaaataactcatttaactattaatttaaggatgtggtgtaccaatacactcaagttgttgggtgtaccatataatttgcct 165  Q
    |||||||| ||||||||||| | | ||||||| ||| |||||||||  ||||||||| || ||  |||||||||| |||||||||    
T  47898 acaaaaaacaactcatttaattgtgaatttaacgatttggtgtaccggtacactcaaatttttaagtgtaccatagaatttgcct 47982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 166
Target Start/End: Complemental strand, 45843 - 45759
Alignment:
Q  83 aaaaaataactcatttaactattaatttaaggatgtggtgtaccaatacactcaagt-tgttgggtgtaccatataatttgccta 166  Q
    |||||| |||||| |||||||||||||||| ||| || |||| | |||||||||| | | |||| ||||||||| ||||||||||    
T  45843 aaaaaacaactcacttaactattaatttaaagatttgatgtatcgatacactcaaatattttggatgtaccatagaatttgccta 45759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 23 - 70
Target Start/End: Complemental strand, 41531 - 41484
Alignment:
Q  23 ttttggtaaataagatttagttattataattataggtgatagaaaata 70  Q
    ||||||||||||||||||| |||||||||||||   ||||||||||||    
T  41531 ttttggtaaataagatttaattattataattatcaatgatagaaaata 41484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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