View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20410_high_2 (Length: 332)
Name: NF20410_high_2
Description: NF20410
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20410_high_2 |
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Alignment Details
Target: chr7 (Bit Score: 236; Significance: 1e-130; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 10 - 318
Target Start/End: Original strand, 21215618 - 21215918
Alignment:
| Q |
10 |
aatattgatcaggtatgtatatgtctaaattggatcctctggagccgactttgaaccgcagatcgttagattaagagagaaaattttatttgttttgtat |
109 |
Q |
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| T |
21215618 |
aatattgatcaggtatgtatatgtctaaattggatcctctggagccgactttgaatcgcagatcgttagattaagagagaaaattttatttgttttgtat |
21215717 |
T |
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| Q |
110 |
gcaggtccttaatcgtcaagtgaagattgatgttttgatggacaaaaccgataaccttcgtgatcaggtatccttttatttgttcatacatagttcatga |
209 |
Q |
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| T |
21215718 |
gcaggtccttaatcgtcaagtgaagattgatgttttgatggacaaaactgacaaccttcgtgatcagg--tccttttattttttcatacacagttcatga |
21215815 |
T |
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| Q |
210 |
attacttactatatatgtatatttttacacacacatgaataggggtatagtataatctagtaaccataaataac--taaattacattgtcatttatagct |
307 |
Q |
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||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
21215816 |
attacttactatatatgtatacttttacacacacatga--------atagtataatctagtaaccataaataactataaattacattgtcatttatagct |
21215907 |
T |
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| Q |
308 |
atgtgattgat |
318 |
Q |
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||||||||||| |
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| T |
21215908 |
atgtgattgat |
21215918 |
T |
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