View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20411_high_2 (Length: 367)
Name: NF20411_high_2
Description: NF20411
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20411_high_2 |
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Alignment Details
Target: chr7 (Bit Score: 259; Significance: 1e-144; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 91 - 361
Target Start/End: Original strand, 48286262 - 48286532
Alignment:
| Q |
91 |
caatgcagcaaccatcgcccgaacaaaaaccaataatactaccaaaaccaccttgttatagagacccaaacatccaacaaaaaccgcttccaacacgaaa |
190 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48286262 |
caatgcagcaaccatcgcccgaacaaaaaccaataatactaccaaaaccaccttgttatagagacccaaacatccaacaaaaaccgcttccaacacgaaa |
48286361 |
T |
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| Q |
191 |
cccttctctcccaccttccttccgaccaaaacccaagaaacgtaattattgtcgcctatgttgttgcacattttgcatcatcttcctcattctcttcttc |
290 |
Q |
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|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
48286362 |
cccttctctcccaccttctttccgaccaaaacccaagaaacgtaattattgtcgcctattttgttgcacattttgcatcatcttcctcattctcttcttc |
48286461 |
T |
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| Q |
291 |
cttttcatcctcgccgccgcagttatctacattctctatcaaccttccataccagaattccacctcggttc |
361 |
Q |
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|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
48286462 |
cttttcatcctcgccgccgcagttatctacattctctaccaaccttccataccagaattccacctcggttc |
48286532 |
T |
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