View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20413_high_7 (Length: 320)

Name: NF20413_high_7
Description: NF20413
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20413_high_7
NF20413_high_7
[»] chr1 (29 HSPs)
chr1 (171-256)||(9101238-9101323)
chr1 (5-79)||(9101074-9101148)
chr1 (1-46)||(3549788-3549833)
chr1 (2-46)||(10832081-10832125)
chr1 (1-46)||(8338684-8338729)
chr1 (1-46)||(45115256-45115301)
chr1 (4-44)||(8455064-8455104)
chr1 (3-46)||(18607173-18607216)
chr1 (1-46)||(6156643-6156688)
chr1 (1-46)||(19175674-19175719)
chr1 (1-46)||(34953982-34954027)
chr1 (1-44)||(42761464-42761507)
chr1 (5-43)||(5595510-5595548)
chr1 (9-59)||(14967319-14967369)
chr1 (1-59)||(18353658-18353716)
chr1 (1-59)||(46412774-46412832)
chr1 (1-46)||(6508406-6508451)
chr1 (1-46)||(14365451-14365496)
chr1 (1-46)||(14885396-14885441)
chr1 (9-46)||(24981935-24981972)
chr1 (1-42)||(33289061-33289102)
chr1 (1-46)||(33939383-33939428)
chr1 (1-46)||(43728195-43728240)
chr1 (9-46)||(46906870-46906907)
chr1 (1-46)||(50503192-50503237)
chr1 (9-46)||(50550213-50550250)
chr1 (1-46)||(52923409-52923454)
chr1 (1-33)||(34491270-34491302)
chr1 (3-59)||(50550115-50550171)
[»] chr8 (28 HSPs)
chr8 (1-53)||(45045463-45045515)
chr8 (1-46)||(27518401-27518446)
chr8 (1-44)||(25267986-25268029)
chr8 (1-59)||(3444618-3444676)
chr8 (1-59)||(10117056-10117114)
chr8 (1-44)||(13080174-13080217)
chr8 (1-46)||(5888422-5888467)
chr8 (1-46)||(33574873-33574918)
chr8 (4-45)||(35010245-35010286)
chr8 (1-46)||(41753844-41753889)
chr8 (3-46)||(92767-92810)
chr8 (1-44)||(6189720-6189763)
chr8 (1-44)||(9015902-9015945)
chr8 (1-44)||(15037761-15037804)
chr8 (1-59)||(13964415-13964473)
chr8 (1-46)||(1662663-1662708)
chr8 (1-46)||(1744309-1744354)
chr8 (9-46)||(2116655-2116692)
chr8 (1-46)||(7258671-7258716)
chr8 (9-46)||(10934697-10934734)
chr8 (1-46)||(14381324-14381369)
chr8 (1-46)||(24052914-24052959)
chr8 (1-46)||(31810343-31810388)
chr8 (1-46)||(31810420-31810465)
chr8 (1-46)||(40098769-40098814)
chr8 (7-44)||(44099003-44099040)
chr8 (6-46)||(3385569-3385609)
chr8 (1-45)||(40640364-40640408)
[»] chr7 (34 HSPs)
chr7 (1-46)||(31813420-31813465)
chr7 (1-46)||(28306324-28306369)
chr7 (1-44)||(43130244-43130287)
chr7 (1-59)||(6455545-6455603)
chr7 (9-46)||(7701197-7701234)
chr7 (9-46)||(8447811-8447848)
chr7 (1-46)||(11002402-11002447)
chr7 (1-46)||(24280907-24280952)
chr7 (1-46)||(25079293-25079338)
chr7 (1-46)||(41872137-41872182)
chr7 (1-57)||(30138874-30138930)
chr7 (3-46)||(3882816-3882859)
chr7 (1-44)||(21886478-21886521)
chr7 (3-46)||(25814770-25814813)
chr7 (3-46)||(45002085-45002128)
chr7 (1-59)||(6455635-6455693)
chr7 (1-59)||(28321649-28321707)
chr7 (1-43)||(32490601-32490643)
chr7 (3-41)||(44416620-44416658)
chr7 (1-46)||(2456345-2456390)
chr7 (9-46)||(2943221-2943258)
chr7 (1-46)||(6803459-6803504)
chr7 (1-46)||(8127913-8127958)
chr7 (3-44)||(9930399-9930440)
chr7 (9-46)||(23818433-23818470)
chr7 (1-46)||(24935901-24935946)
chr7 (1-46)||(25079216-25079261)
chr7 (9-46)||(25245237-25245274)
chr7 (1-46)||(38238870-38238915)
chr7 (9-46)||(46022642-46022679)
chr7 (1-46)||(46943953-46943998)
chr7 (2-46)||(3882561-3882604)
chr7 (1-45)||(21586900-21586944)
chr7 (1-41)||(35216490-35216530)
[»] chr6 (24 HSPs)
chr6 (1-46)||(12383675-12383720)
chr6 (3-57)||(12383875-12383929)
chr6 (1-46)||(13281543-13281588)
chr6 (1-59)||(11746314-11746372)
chr6 (1-59)||(14031755-14031813)
chr6 (1-59)||(28555033-28555091)
chr6 (1-46)||(6894823-6894868)
chr6 (1-46)||(30397734-30397779)
chr6 (1-46)||(31158928-31158973)
chr6 (9-46)||(34170087-34170124)
chr6 (1-44)||(31714621-31714664)
chr6 (10-59)||(4329672-4329721)
chr6 (1-46)||(8449662-8449707)
chr6 (1-46)||(8458466-8458511)
chr6 (11-44)||(12785111-12785144)
chr6 (1-46)||(14173399-14173444)
chr6 (1-46)||(14177935-14177980)
chr6 (9-46)||(16199129-16199166)
chr6 (1-46)||(17773587-17773632)
chr6 (1-46)||(31398312-31398357)
chr6 (9-46)||(34379829-34379866)
chr6 (1-41)||(13277108-13277148)
chr6 (1-41)||(21998125-21998165)
chr6 (3-43)||(31996511-31996551)
[»] chr3 (29 HSPs)
chr3 (1-46)||(3972477-3972522)
chr3 (1-46)||(3997356-3997401)
chr3 (1-59)||(24075531-24075589)
chr3 (1-46)||(23090037-23090082)
chr3 (1-46)||(43177097-43177142)
chr3 (1-45)||(3994572-3994616)
chr3 (1-44)||(37897693-37897736)
chr3 (9-46)||(8504859-8504896)
chr3 (1-46)||(10872758-10872803)
chr3 (1-46)||(12744910-12744955)
chr3 (9-46)||(21217175-21217212)
chr3 (1-41)||(22173809-22173849)
chr3 (1-44)||(20619002-20619045)
chr3 (15-61)||(39911125-39911171)
chr3 (1-42)||(3074864-3074905)
chr3 (3-44)||(9492687-9492728)
chr3 (1-46)||(24694314-24694359)
chr3 (9-46)||(27224589-27224626)
chr3 (1-46)||(29389336-29389381)
chr3 (1-46)||(38677574-38677619)
chr3 (1-46)||(42929015-42929060)
chr3 (9-46)||(44382817-44382854)
chr3 (9-46)||(48191724-48191761)
chr3 (3-44)||(51060674-51060715)
chr3 (1-46)||(52215889-52215934)
chr3 (9-46)||(54595799-54595836)
chr3 (3-39)||(22099795-22099831)
chr3 (1-41)||(36362690-36362730)
chr3 (3-59)||(40202407-40202463)
[»] chr4 (37 HSPs)
chr4 (1-45)||(36786160-36786204)
chr4 (2-53)||(18881431-18881482)
chr4 (3-46)||(38716396-38716439)
chr4 (1-59)||(14450953-14451011)
chr4 (3-44)||(12672458-12672499)
chr4 (9-46)||(34616224-34616261)
chr4 (9-46)||(39160908-39160945)
chr4 (1-46)||(54713107-54713152)
chr4 (2-46)||(16170919-16170963)
chr4 (1-44)||(483990-484033)
chr4 (1-44)||(21113078-21113121)
chr4 (1-59)||(3511705-3511763)
chr4 (1-59)||(3669552-3669610)
chr4 (1-59)||(19934724-19934782)
chr4 (12-46)||(21142099-21142133)
chr4 (1-59)||(29006831-29006889)
chr4 (1-43)||(34937113-34937155)
chr4 (9-55)||(48603684-48603730)
chr4 (1-46)||(1829633-1829678)
chr4 (2-55)||(16203427-16203480)
chr4 (1-46)||(16468290-16468335)
chr4 (1-46)||(20814615-20814660)
chr4 (1-46)||(40881513-40881558)
chr4 (1-42)||(46518861-46518902)
chr4 (9-46)||(47181568-47181605)
chr4 (9-46)||(48402505-48402542)
chr4 (1-38)||(48414942-48414979)
chr4 (1-46)||(48603573-48603618)
chr4 (1-46)||(49481889-49481934)
chr4 (1-42)||(54057656-54057697)
chr4 (1-46)||(54164899-54164944)
chr4 (1-46)||(56328536-56328581)
chr4 (9-46)||(56364420-56364457)
chr4 (1-41)||(6462726-6462766)
chr4 (13-53)||(18488618-18488658)
chr4 (4-44)||(40952437-40952477)
chr4 (2-46)||(53176395-53176439)
[»] chr5 (26 HSPs)
chr5 (3-46)||(15549413-15549456)
chr5 (1-46)||(71268-71313)
chr5 (1-46)||(32398089-32398134)
chr5 (1-59)||(14153365-14153423)
chr5 (4-42)||(29177800-29177838)
chr5 (1-59)||(37067851-37067909)
chr5 (1-46)||(11795745-11795790)
chr5 (1-46)||(18033441-18033486)
chr5 (9-46)||(18652859-18652896)
chr5 (1-46)||(26045274-26045319)
chr5 (3-55)||(25941757-25941809)
chr5 (11-46)||(26045315-26045350)
chr5 (3-46)||(28518727-28518770)
chr5 (3-42)||(35032358-35032397)
chr5 (9-59)||(17625734-17625784)
chr5 (1-59)||(36895033-36895091)
chr5 (3-53)||(41814385-41814435)
chr5 (1-46)||(3100414-3100459)
chr5 (1-46)||(3100491-3100536)
chr5 (1-46)||(4082824-4082869)
chr5 (1-46)||(5259471-5259516)
chr5 (1-46)||(20518257-20518302)
chr5 (1-46)||(26141764-26141809)
chr5 (1-46)||(43482858-43482903)
chr5 (10-46)||(17153518-17153554)
chr5 (1-41)||(25773329-25773369)
[»] chr2 (33 HSPs)
chr2 (1-44)||(32630417-32630460)
chr2 (1-46)||(8740528-8740573)
chr2 (1-42)||(26003521-26003562)
chr2 (1-46)||(27331845-27331890)
chr2 (1-46)||(38465875-38465920)
chr2 (1-44)||(15859637-15859680)
chr2 (1-44)||(43732149-43732192)
chr2 (4-46)||(3121511-3121553)
chr2 (9-46)||(3098220-3098257)
chr2 (1-46)||(11342056-11342101)
chr2 (1-46)||(15119863-15119908)
chr2 (1-46)||(19951531-19951576)
chr2 (9-46)||(25270950-25270987)
chr2 (1-46)||(38181846-38181891)
chr2 (9-46)||(41056982-41057019)
chr2 (3-43)||(8383197-8383237)
chr2 (2-46)||(44868521-44868565)
chr2 (7-42)||(6166115-6166150)
chr2 (11-46)||(13333543-13333578)
chr2 (1-44)||(40187329-40187372)
chr2 (9-59)||(1961403-1961453)
chr2 (1-59)||(3887829-3887887)
chr2 (9-59)||(13333443-13333493)
chr2 (2-40)||(35438633-35438671)
chr2 (1-46)||(5574196-5574241)
chr2 (1-46)||(19612950-19612995)
chr2 (1-46)||(20504252-20504297)
chr2 (1-46)||(26234110-26234155)
chr2 (9-46)||(31024180-31024217)
chr2 (1-46)||(40204449-40204494)
chr2 (1-46)||(44274551-44274596)
chr2 (8-44)||(36001792-36001828)
chr2 (1-53)||(36547343-36547395)
[»] scaffold0026 (1 HSPs)
scaffold0026 (1-51)||(88940-88990)
[»] scaffold0009 (3 HSPs)
scaffold0009 (1-46)||(7743-7788)
scaffold0009 (1-45)||(146054-146098)
scaffold0009 (9-46)||(145977-146014)
[»] scaffold0047 (1 HSPs)
scaffold0047 (1-46)||(61248-61293)
[»] scaffold0065 (1 HSPs)
scaffold0065 (9-44)||(36948-36983)
[»] scaffold0341 (2 HSPs)
scaffold0341 (1-46)||(2429-2474)
scaffold0341 (1-46)||(10084-10129)
[»] scaffold0039 (1 HSPs)
scaffold0039 (1-46)||(54397-54442)
[»] scaffold0007 (1 HSPs)
scaffold0007 (1-41)||(246881-246921)


Alignment Details
Target: chr1 (Bit Score: 66; Significance: 4e-29; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 171 - 256
Target Start/End: Original strand, 9101238 - 9101323
Alignment:
Q  171 gttgcgacgcagggatacggtctcagatagcttcaatagttagcggtaagaattttaaattttttaccatgagcacctcacataca 256  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |  ||||||||||||||||||||| |||||    
T  9101238 gttgcgacgcagggatacggtcccagatagcttcaatagttagcggtaagaatttaattttttttaccatgagcacctcaaataca 9101323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 79
Target Start/End: Original strand, 9101074 - 9101148
Alignment:
Q  5 taattgaatgaatctaaaatgtagatttttgtttataatagtcatcagatggtgttatcagtcttagattattcc 79  Q
    |||||||||||||| ||||||| |||||||| ||||||||| ||||||||| |||  ||||| ||||||||||||    
T  9101074 taattgaatgaatccaaaatgttgatttttgcttataatagccatcagatgatgtagtcagttttagattattcc 9101148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 3549833 - 3549788
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||    
T  3549833 tcattaattgaatgaatctaaaatgtagatttttgcttataatagt 3549788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 2 - 46
Target Start/End: Original strand, 10832081 - 10832125
Alignment:
Q  2 cattaattgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    ||||||||||||||| |||||||||||||||||||||||||||||    
T  10832081 cattaattgaatgaacctaaaatgtagatttttgtttataatagt 10832125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 8338729 - 8338684
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||    
T  8338729 tcattaaatgaatgaatctaaaatgtagatttttgcttataatagt 8338684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 45115256 - 45115301
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||    
T  45115256 tcattaaatgaatgaatctaaaatgtagatttttgcttataatagt 45115301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 8455104 - 8455064
Alignment:
Q  4 ttaattgaatgaatctaaaatgtagatttttgtttataata 44  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  8455104 ttaattgaatgaacctaaaatgtagatttttgtttataata 8455064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 46
Target Start/End: Original strand, 18607173 - 18607216
Alignment:
Q  3 attaattgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    ||||||||||||||| |||||| |||||||||||||||||||||    
T  18607173 attaattgaatgaatttaaaatatagatttttgtttataatagt 18607216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 6156688 - 6156643
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    ||||| ||||||||||||||||| || |||||||||||||||||||    
T  6156688 tcatttattgaatgaatctaaaaagttgatttttgtttataatagt 6156643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 19175674 - 19175719
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    ||||| ||||||||||||||||| ||||||||||| ||||||||||    
T  19175674 tcatttattgaatgaatctaaaaagtagatttttgcttataatagt 19175719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 34953982 - 34954027
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    |||||||||||||||||||||||| || ||||||| ||||||||||    
T  34953982 tcattaattgaatgaatctaaaatataaatttttgcttataatagt 34954027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 42761507 - 42761464
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataata 44  Q
    ||||||||||||||||||||||||||| | ||||| ||||||||    
T  42761507 tcattaattgaatgaatctaaaatgtaaagttttgcttataata 42761464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 5595510 - 5595548
Alignment:
Q  5 taattgaatgaatctaaaatgtagatttttgtttataat 43  Q
    ||||||||||||||||||||||||||||||  |||||||    
T  5595510 taattgaatgaatctaaaatgtagatttttacttataat 5595548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 59
Target Start/End: Original strand, 14967319 - 14967369
Alignment:
Q  9 tgaatgaatctaaaatgtagatttttgtttataatagtcatcagatggtgt 59  Q
    |||||||||||||||||| |||||||| |||||||||| ||  ||||||||    
T  14967319 tgaatgaatctaaaatgttgatttttgcttataatagtgattggatggtgt 14967369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 18353658 - 18353716
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatagtcatcagatggtgt 59  Q
    ||||||||||||||||||||||||   |||||||| |||||||||| | | ||||||||    
T  18353658 tcattaattgaatgaatctaaaattatgatttttgcttataatagtgaccggatggtgt 18353716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 46412774 - 46412832
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatagtcatcagatggtgt 59  Q
    |||||||||||||||||| |||||||| ||||||  |||||||||| ||| || |||||    
T  46412774 tcattaattgaatgaatccaaaatgtaaatttttacttataatagtgatcggagggtgt 46412832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 6508451 - 6508406
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    ||||||| ||||||||||||| ||||| ||||||| ||||||||||    
T  6508451 tcattaaatgaatgaatctaagatgtaaatttttgcttataatagt 6508406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 14365451 - 14365496
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    ||||||||| ||||||| |||||| || ||||||||||||||||||    
T  14365451 tcattaattaaatgaatataaaatatatatttttgtttataatagt 14365496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 14885396 - 14885441
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    ||||| |||| ||||||||||||| |||||||||| ||||||||||    
T  14885396 tcatttattggatgaatctaaaatttagatttttgcttataatagt 14885441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 46
Target Start/End: Original strand, 24981935 - 24981972
Alignment:
Q  9 tgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    |||||||||||||||||| |||||||| ||||||||||    
T  24981935 tgaatgaatctaaaatgttgatttttgcttataatagt 24981972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 33289061 - 33289102
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataa 42  Q
    ||||||||| ||| |||||||||||||||| |||||||||||    
T  33289061 tcattaattaaataaatctaaaatgtagatctttgtttataa 33289102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 33939383 - 33939428
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    ||||||| ||||||||||||||||||| | ||||| ||||||||||    
T  33939383 tcattaaatgaatgaatctaaaatgtaaacttttgcttataatagt 33939428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 43728240 - 43728195
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    ||||||||| ||| || ||||||| |||||||||||||||||||||    
T  43728240 tcattaattaaattaacctaaaatatagatttttgtttataatagt 43728195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 46
Target Start/End: Complemental strand, 46906907 - 46906870
Alignment:
Q  9 tgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    |||||||||||||||| |||||||||| ||||||||||    
T  46906907 tgaatgaatctaaaatatagatttttgcttataatagt 46906870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 50503237 - 50503192
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    ||||||||||||| |||||||||| || |||| |||||||||||||    
T  50503237 tcattaattgaataaatctaaaatataaatttgtgtttataatagt 50503192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 46
Target Start/End: Original strand, 50550213 - 50550250
Alignment:
Q  9 tgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    |||||||||||||||||| ||||||| |||||||||||    
T  50550213 tgaatgaatctaaaatgttgatttttctttataatagt 50550250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 52923409 - 52923454
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    ||||| |||||||||| |||||| ||||||||||| ||||||||||    
T  52923409 tcatttattgaatgaacctaaaaagtagatttttgcttataatagt 52923454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 34491270 - 34491302
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttt 33  Q
    |||||||||||||||||||||||||| ||||||    
T  34491270 tcattaattgaatgaatctaaaatgtcgatttt 34491302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 59
Target Start/End: Complemental strand, 50550171 - 50550115
Alignment:
Q  3 attaattgaatgaatctaaaatgtagatttttgtttataatagtcatcagatggtgt 59  Q
    ||||||||||||||| || ||||| ||||||| ||||||||||| ||| | ||||||    
T  50550171 attaattgaatgaatttataatgttgatttttatttataatagtgatcgggtggtgt 50550115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 45; Significance: 1e-16; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 45045463 - 45045515
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatagtcatcaga 53  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  45045463 tcattaattgaatgaatctaaaatatagatttttgtttataatagtgatcaga 45045515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 27518401 - 27518446
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||    
T  27518401 tcattaaatgaatgaatctaaaatgtagatttttgtttataatagt 27518446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 25268029 - 25267986
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataata 44  Q
    ||||||||| ||||||||||||||||||||||||||||||||||    
T  25268029 tcattaattaaatgaatctaaaatgtagatttttgtttataata 25267986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 3444676 - 3444618
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatagtcatcagatggtgt 59  Q
    ||||||||||||||||| ||||||||| |||||||||||||||||| ||| || |||||    
T  3444676 tcattaattgaatgaatataaaatgtaaatttttgtttataatagtgatctgaaggtgt 3444618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 10117056 - 10117114
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatagtcatcagatggtgt 59  Q
    ||||||||||||||||||||||||||| ||||||| |||||||||| | | ||||||||    
T  10117056 tcattaattgaatgaatctaaaatgtaaatttttgcttataatagtgaccggatggtgt 10117114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 13080174 - 13080217
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataata 44  Q
    ||||||||| ||||||| ||||||||||||||||||||||||||    
T  13080174 tcattaattcaatgaatgtaaaatgtagatttttgtttataata 13080217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 5888422 - 5888467
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    |||||||||||||||||||| || ||||||||||| ||||||||||    
T  5888422 tcattaattgaatgaatctacaaagtagatttttgcttataatagt 5888467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 33574873 - 33574918
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    |||||||||||||| ||||||||||| |||||||||||||| ||||    
T  33574873 tcattaattgaatgtatctaaaatgtggatttttgtttatattagt 33574918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 35010245 - 35010286
Alignment:
Q  4 ttaattgaatgaatctaaaatgtagatttttgtttataatag 45  Q
    |||||||||||||| |||||||||||||||| ||||||||||    
T  35010245 ttaattgaatgaatttaaaatgtagatttttctttataatag 35010286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 41753844 - 41753889
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    |||||||||||||||||||||||| |  ||||||||||||||||||    
T  41753844 tcattaattgaatgaatctaaaatattaatttttgtttataatagt 41753889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 3 - 46
Target Start/End: Complemental strand, 92810 - 92767
Alignment:
Q  3 attaattgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    ||||| |||||||||||||| ||| |||||||||||||||||||    
T  92810 attaaatgaatgaatctaaattgttgatttttgtttataatagt 92767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 6189720 - 6189763
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataata 44  Q
    ||||| ||||||||||||||||| || |||||||||||||||||    
T  6189720 tcatttattgaatgaatctaaaacgttgatttttgtttataata 6189763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 9015902 - 9015945
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataata 44  Q
    |||||||||||||||||||||||| |||||||||  ||||||||    
T  9015902 tcattaattgaatgaatctaaaatatagatttttacttataata 9015945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 15037804 - 15037761
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataata 44  Q
    ||||| |||||||||| |||||| ||||||||||||||||||||    
T  15037804 tcatttattgaatgaacctaaaaagtagatttttgtttataata 15037761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 13964473 - 13964415
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatagtcatcagatggtgt 59  Q
    ||||| ||||||||||| |||||||| |||||||| |||||||||| | |||| |||||    
T  13964473 tcatttattgaatgaatttaaaatgttgatttttgcttataatagtgaccagagggtgt 13964415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 1662663 - 1662708
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    ||||||| ||||||||||||||||||| ||||||| |||| |||||    
T  1662663 tcattaaatgaatgaatctaaaatgtatatttttgcttattatagt 1662708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 1744309 - 1744354
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    ||||||| ||||||||||||||||||| ||||||| |||| |||||    
T  1744309 tcattaaatgaatgaatctaaaatgtatatttttgcttattatagt 1744354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 46
Target Start/End: Original strand, 2116655 - 2116692
Alignment:
Q  9 tgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    ||||||||||||||| ||||||||||| ||||||||||    
T  2116655 tgaatgaatctaaaacgtagatttttgcttataatagt 2116692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 7258671 - 7258716
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    ||||||||||||||||||||||||||| | ||||  ||||||||||    
T  7258671 tcattaattgaatgaatctaaaatgtaaaattttacttataatagt 7258716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 46
Target Start/End: Original strand, 10934697 - 10934734
Alignment:
Q  9 tgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    |||||||||||||||||| |||||||| ||||||||||    
T  10934697 tgaatgaatctaaaatgttgatttttgcttataatagt 10934734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 14381324 - 14381369
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    |||||||||||||| |||||||| || |||||||||||||| ||||    
T  14381324 tcattaattgaatgtatctaaaaagtggatttttgtttatattagt 14381369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 24052914 - 24052959
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    ||||| ||| |||||| |||||| ||||||||||||||||||||||    
T  24052914 tcatttattcaatgaacctaaaaagtagatttttgtttataatagt 24052959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 31810388 - 31810343
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    ||||||| ||||||||||||||||||||  ||||| ||||||||||    
T  31810388 tcattaaatgaatgaatctaaaatgtagcattttgcttataatagt 31810343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 31810420 - 31810465
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    ||||||| |||||||||||||||||||| |||||| ||||| ||||    
T  31810420 tcattaaatgaatgaatctaaaatgtagttttttgcttatattagt 31810465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 40098814 - 40098769
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    |||||||||||||| |||||||| ||||||||||| ||||| ||||    
T  40098814 tcattaattgaatgtatctaaaaagtagatttttgcttatattagt 40098769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 44
Target Start/End: Complemental strand, 44099040 - 44099003
Alignment:
Q  7 attgaatgaatctaaaatgtagatttttgtttataata 44  Q
    ||||||||||| |||||||| |||||||||||||||||    
T  44099040 attgaatgaatttaaaatgttgatttttgtttataata 44099003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 46
Target Start/End: Original strand, 3385569 - 3385609
Alignment:
Q  6 aattgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    |||| ||||||||||||||||||| ||||| ||||||||||    
T  3385569 aattcaatgaatctaaaatgtagagttttgcttataatagt 3385609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 40640364 - 40640408
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatag 45  Q
    ||||||||||||||||||||||||| | | ||||| |||||||||    
T  40640364 tcattaattgaatgaatctaaaatgcaaagttttgcttataatag 40640408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 31813465 - 31813420
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||    
T  31813465 tcattaattgaatgaatctaaaatgtaaatttttgtttataatagt 31813420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 28306369 - 28306324
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||    
T  28306369 tcattaaatgaatgaatctaaaatgtagatttttggttataatagt 28306324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 43130287 - 43130244
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataata 44  Q
    ||||||||||||||||||||||| |||||||||| |||||||||    
T  43130287 tcattaattgaatgaatctaaaacgtagatttttatttataata 43130244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 6455603 - 6455545
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatagtcatcagatggtgt 59  Q
    ||||||| ||||||||||||||||||| ||||||| |||||||||| ||| || |||||    
T  6455603 tcattaaatgaatgaatctaaaatgtaaatttttgcttataatagtgatcggagggtgt 6455545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 9 - 46
Target Start/End: Complemental strand, 7701234 - 7701197
Alignment:
Q  9 tgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  7701234 tgaatgaatctaaaatgtagatttttgcttataatagt 7701197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 9 - 46
Target Start/End: Original strand, 8447811 - 8447848
Alignment:
Q  9 tgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  8447811 tgaatgaatctaaaatgtagatttttgcttataatagt 8447848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 11002402 - 11002447
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    ||||||| ||||||||||||||||||||||||||  ||||||||||    
T  11002402 tcattaaatgaatgaatctaaaatgtagatttttacttataatagt 11002447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 24280907 - 24280952
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    ||||||||||||||||| ||||||||||||||||  ||||||||||    
T  24280907 tcattaattgaatgaatttaaaatgtagatttttacttataatagt 24280952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 25079293 - 25079338
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    |||||||||||||| |||||||| ||||||||||||||||| ||||    
T  25079293 tcattaattgaatgtatctaaaaagtagatttttgtttatattagt 25079338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 41872137 - 41872182
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    ||||||| ||||||||||||||||||||||||||| ||||| ||||    
T  41872137 tcattaaatgaatgaatctaaaatgtagatttttgcttatattagt 41872182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 30138874 - 30138930
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatagtcatcagatggt 57  Q
    ||||||||||||||||||||||||||| ||||||  |||||| ||| ||| ||||||    
T  30138874 tcattaattgaatgaatctaaaatgtaaatttttacttataacagtgatcggatggt 30138930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 3 - 46
Target Start/End: Complemental strand, 3882859 - 3882816
Alignment:
Q  3 attaattgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    |||||||||||||||||||||| |  ||||||||||||||||||    
T  3882859 attaattgaatgaatctaaaatattaatttttgtttataatagt 3882816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 21886521 - 21886478
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataata 44  Q
    |||||||||||||||||||||||| || ||||||| ||||||||    
T  21886521 tcattaattgaatgaatctaaaatataaatttttgcttataata 21886478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 3 - 46
Target Start/End: Original strand, 25814770 - 25814813
Alignment:
Q  3 attaattgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    ||||| ||||| ||||||||||||||| ||||||||||||||||    
T  25814770 attaaatgaataaatctaaaatgtagagttttgtttataatagt 25814813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 3 - 46
Target Start/End: Complemental strand, 45002128 - 45002085
Alignment:
Q  3 attaattgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    ||||||||||||||| ||||||||| | ||||||||||||||||    
T  45002128 attaattgaatgaatttaaaatgtaaagttttgtttataatagt 45002085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 6455635 - 6455693
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatagtcatcagatggtgt 59  Q
    ||||||| |||||||| |||||||||||||||||| ||||| |||| ||| || |||||    
T  6455635 tcattaaatgaatgaacctaaaatgtagatttttgcttatattagtgatcggagggtgt 6455693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 28321649 - 28321707
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatagtcatcagatggtgt 59  Q
    ||||||||||||| ||||||||||||||| |||| ||||| ||||| ||| || |||||    
T  28321649 tcattaattgaataaatctaaaatgtagaattttatttatgatagtgatcggagggtgt 28321707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 32490643 - 32490601
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataat 43  Q
    ||||||||| ||||||||||||||||| | |||||||||||||    
T  32490643 tcattaattaaatgaatctaaaatgtaaagttttgtttataat 32490601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 41
Target Start/End: Original strand, 44416620 - 44416658
Alignment:
Q  3 attaattgaatgaatctaaaatgtagatttttgtttata 41  Q
    |||||||||||||||||||||| || |||||||||||||    
T  44416620 attaattgaatgaatctaaaatataaatttttgtttata 44416658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 2456390 - 2456345
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    ||||||||| |||||| |||||| ||||||||||| ||||||||||    
T  2456390 tcattaattcaatgaacctaaaaagtagatttttgcttataatagt 2456345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 46
Target Start/End: Complemental strand, 2943258 - 2943221
Alignment:
Q  9 tgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    |||||||||||||||||| |||||||| ||||||||||    
T  2943258 tgaatgaatctaaaatgttgatttttgcttataatagt 2943221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 6803459 - 6803504
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    |||| |||||||||||| |||||| | |||||||||||||||||||    
T  6803459 tcatcaattgaatgaatttaaaatattgatttttgtttataatagt 6803504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 8127913 - 8127958
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    ||||| ||||||||||||||||  || |||||||||||||||||||    
T  8127913 tcatttattgaatgaatctaaacagttgatttttgtttataatagt 8127958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 44
Target Start/End: Complemental strand, 9930440 - 9930399
Alignment:
Q  3 attaattgaatgaatctaaaatgtagatttttgtttataata 44  Q
    ||||||| |||||||||||||| || ||||||||||||||||    
T  9930440 attaattaaatgaatctaaaatataaatttttgtttataata 9930399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 46
Target Start/End: Complemental strand, 23818470 - 23818433
Alignment:
Q  9 tgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    |||||||||||||||||| |||||||| ||||||||||    
T  23818470 tgaatgaatctaaaatgttgatttttgcttataatagt 23818433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 24935946 - 24935901
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    ||||||| |||||||| |||||||||||||||||| ||||| ||||    
T  24935946 tcattaaatgaatgaacctaaaatgtagatttttgcttatattagt 24935901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 25079261 - 25079216
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    |||||||||||||| |||||||| ||||||||||| ||||| ||||    
T  25079261 tcattaattgaatgtatctaaaaagtagatttttgcttatattagt 25079216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 46
Target Start/End: Original strand, 25245237 - 25245274
Alignment:
Q  9 tgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    |||||||||||||||||| |||||||| ||||||||||    
T  25245237 tgaatgaatctaaaatgttgatttttgcttataatagt 25245274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 38238870 - 38238915
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    |||||||||||||| |||||||| ||||||||||| ||||| ||||    
T  38238870 tcattaattgaatgtatctaaaaagtagatttttgcttatattagt 38238915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 46
Target Start/End: Original strand, 46022642 - 46022679
Alignment:
Q  9 tgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    ||||||||||||||||||||||||||  ||||||||||    
T  46022642 tgaatgaatctaaaatgtagattttttcttataatagt 46022679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 46943998 - 46943953
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    |||||||||||||| |||||||| || |||||||||||||| ||||    
T  46943998 tcattaattgaatgtatctaaaaagtggatttttgtttatattagt 46943953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 46
Target Start/End: Complemental strand, 3882604 - 3882561
Alignment:
Q  2 cattaattgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    |||||||||||||||||||||||||  |||||| |||||||||||    
T  3882604 cattaattgaatgaatctaaaatgttaattttt-tttataatagt 3882561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 21586900 - 21586944
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatag 45  Q
    |||||||||||||||||||||||| | |||||||  |||||||||    
T  21586900 tcattaattgaatgaatctaaaatattgatttttacttataatag 21586944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 35216530 - 35216490
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttata 41  Q
    ||||| |||||||||||||||||| || |||||||||||||    
T  35216530 tcatttattgaatgaatctaaaatataaatttttgtttata 35216490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 12383675 - 12383720
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||    
T  12383675 tcattaattgaattaatctaaaatgtagatttttgtttataatagt 12383720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 3 - 57
Target Start/End: Original strand, 12383875 - 12383929
Alignment:
Q  3 attaattgaatgaatctaaaatgtagatttttgtttataatagtcatcagatggt 57  Q
    ||||||||||||| ||||||||||||||||||| |||||||||| | ||||||||    
T  12383875 attaattgaatgagtctaaaatgtagatttttgcttataatagtgaacagatggt 12383929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 13281588 - 13281543
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    |||||||||||||||||||||||| |||||||||| ||||||||||    
T  13281588 tcattaattgaatgaatctaaaatctagatttttgcttataatagt 13281543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 11746314 - 11746372
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatagtcatcagatggtgt 59  Q
    ||||||||||||||||||||||||||| |||||| ||||||| ||| | |||| |||||    
T  11746314 tcattaattgaatgaatctaaaatgtaaatttttttttataacagtgaccagagggtgt 11746372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 14031755 - 14031813
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatagtcatcagatggtgt 59  Q
    |||||||||||||||||||||||| |||||||||  ||||||| || ||| ||||||||    
T  14031755 tcattaattgaatgaatctaaaatatagatttttacttataattgtgatcggatggtgt 14031813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 28555033 - 28555091
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatagtcatcagatggtgt 59  Q
    ||||||| | ||||||||||||||||||||||||| |||||||||| | |||| |||||    
T  28555033 tcattaaataaatgaatctaaaatgtagatttttgcttataatagtgaccagagggtgt 28555091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 6894868 - 6894823
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    ||||| ||| ||||||||||||||||| ||||||||||||||||||    
T  6894868 tcattcattaaatgaatctaaaatgtaaatttttgtttataatagt 6894823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 30397779 - 30397734
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    |||||||||||||| ||||||||||| |||||||||||||| ||||    
T  30397779 tcattaattgaatgtatctaaaatgtggatttttgtttatattagt 30397734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 31158928 - 31158973
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    ||||||||| ||||||||||||||||||||||||  ||||||||||    
T  31158928 tcattaatttaatgaatctaaaatgtagatttttacttataatagt 31158973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 9 - 46
Target Start/End: Complemental strand, 34170124 - 34170087
Alignment:
Q  9 tgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    |||||||||||||||||| |||||||||||||||||||    
T  34170124 tgaatgaatctaaaatgttgatttttgtttataatagt 34170087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 31714621 - 31714664
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataata 44  Q
    |||||||||||||||| |||||||||||||||||  ||||||||    
T  31714621 tcattaattgaatgaacctaaaatgtagattttttcttataata 31714664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 59
Target Start/End: Complemental strand, 4329721 - 4329672
Alignment:
Q  10 gaatgaatctaaaatgtagatttttgtttataatagtcatcagatggtgt 59  Q
    ||||||||||| ||||| |||||||| |||||||||| ||| ||||||||    
T  4329721 gaatgaatctagaatgttgatttttgcttataatagtaatcggatggtgt 4329672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 8449662 - 8449707
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    |||||||||||||||||||||||| |  ||||||| ||||||||||    
T  8449662 tcattaattgaatgaatctaaaatattaatttttgcttataatagt 8449707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 8458466 - 8458511
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    |||||||||||||||||||||||| |  ||||||| ||||||||||    
T  8458466 tcattaattgaatgaatctaaaatattaatttttgcttataatagt 8458511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 44
Target Start/End: Original strand, 12785111 - 12785144
Alignment:
Q  11 aatgaatctaaaatgtagatttttgtttataata 44  Q
    ||||||||||||||| ||||||||||||||||||    
T  12785111 aatgaatctaaaatgaagatttttgtttataata 12785144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 14173444 - 14173399
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    ||||| |||||||||||||||||  |||||||||| ||||||||||    
T  14173444 tcatttattgaatgaatctaaaaattagatttttgcttataatagt 14173399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 14177980 - 14177935
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    ||||| |||||||||||||||||  |||||||||| ||||||||||    
T  14177980 tcatttattgaatgaatctaaaaattagatttttgcttataatagt 14177935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 46
Target Start/End: Complemental strand, 16199166 - 16199129
Alignment:
Q  9 tgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    |||||||| |||||||||||||||||| ||||||||||    
T  16199166 tgaatgaacctaaaatgtagatttttgcttataatagt 16199129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 17773587 - 17773632
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    |||||||||||||| |||||||| ||||||||||| ||||| ||||    
T  17773587 tcattaattgaatgtatctaaaaagtagatttttgcttatattagt 17773632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 31398312 - 31398357
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    ||||||| ||||||||||||||||||| | ||||| ||||||||||    
T  31398312 tcattaaatgaatgaatctaaaatgtaaacttttgcttataatagt 31398357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 46
Target Start/End: Original strand, 34379829 - 34379866
Alignment:
Q  9 tgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    |||||||||||||||||| |||||||| ||||||||||    
T  34379829 tgaatgaatctaaaatgttgatttttgcttataatagt 34379866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 13277108 - 13277148
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttata 41  Q
    ||||| |||||||||||||||||| || |||||||||||||    
T  13277108 tcatttattgaatgaatctaaaatataaatttttgtttata 13277148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 21998125 - 21998165
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttata 41  Q
    |||||||||||||| |||||||| ||||||||||| |||||    
T  21998125 tcattaattgaatgtatctaaaaagtagatttttgcttata 21998165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 31996551 - 31996511
Alignment:
Q  3 attaattgaatgaatctaaaatgtagatttttgtttataat 43  Q
    ||||||||||||||||| |||||| |||||||| |||||||    
T  31996551 attaattgaatgaatctgaaatgttgatttttgcttataat 31996511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 3972522 - 3972477
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    |||||||||||||||||||||||||||||||||| |||||||||||    
T  3972522 tcattaattgaatgaatctaaaatgtagatttttatttataatagt 3972477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 3997356 - 3997401
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    |||||||||||||||||||||||||||||||||| |||||||||||    
T  3997356 tcattaattgaatgaatctaaaatgtagatttttatttataatagt 3997401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 24075531 - 24075589
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatagtcatcagatggtgt 59  Q
    |||| |||||||||||||||||||||||||||||| |||||||||| | | ||||||||    
T  24075531 tcatgaattgaatgaatctaaaatgtagatttttgcttataatagttaccggatggtgt 24075589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 23090037 - 23090082
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||    
T  23090037 tcattaattgaatgaatctaacatgtatatttttgtttataatagt 23090082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 43177142 - 43177097
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    ||||||||| ||||||| ||||||||||||||||||||||||||||    
T  43177142 tcattaattaaatgaatttaaaatgtagatttttgtttataatagt 43177097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 3994572 - 3994616
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatag 45  Q
    |||||||||||||||||||||||||||||||||| ||||| ||||    
T  3994572 tcattaattgaatgaatctaaaatgtagatttttatttattatag 3994616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 37897736 - 37897693
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataata 44  Q
    |||||||||||||||||||||||| |||||||||| ||||||||    
T  37897736 tcattaattgaatgaatctaaaatttagatttttgcttataata 37897693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 9 - 46
Target Start/End: Complemental strand, 8504896 - 8504859
Alignment:
Q  9 tgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  8504896 tgaatgaatctaaaatgtagatttttgcttataatagt 8504859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 10872758 - 10872803
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    |||||||||||||||||||||||| || ||||||| ||||||||||    
T  10872758 tcattaattgaatgaatctaaaatataaatttttgcttataatagt 10872803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 12744955 - 12744910
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    |||||||||||||||||||||||||||  |||||| ||||||||||    
T  12744955 tcattaattgaatgaatctaaaatgtaagtttttgcttataatagt 12744910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 9 - 46
Target Start/End: Complemental strand, 21217212 - 21217175
Alignment:
Q  9 tgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  21217212 tgaatgaatctaaaatgtagatttttgcttataatagt 21217175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 22173849 - 22173809
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttata 41  Q
    |||||||||||||| |||||||||||||||||||| |||||    
T  22173849 tcattaattgaatgtatctaaaatgtagatttttgcttata 22173809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 20619045 - 20619002
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataata 44  Q
    |||||||||||||||||  |||||||| ||||||||||||||||    
T  20619045 tcattaattgaatgaatgcaaaatgtaaatttttgtttataata 20619002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 39911171 - 39911125
Alignment:
Q  15 aatctaaaatgtagatttttgtttataatagtcatcagatggtgtta 61  Q
    |||||||||||| |||||||| |||||||||| ||||||| ||||||    
T  39911171 aatctaaaatgttgatttttgcttataatagtgatcagattgtgtta 39911125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 3074864 - 3074905
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataa 42  Q
    ||||||| ||||||||||||||||||| ||||||| ||||||    
T  3074864 tcattaaatgaatgaatctaaaatgtaaatttttgcttataa 3074905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 44
Target Start/End: Complemental strand, 9492728 - 9492687
Alignment:
Q  3 attaattgaatgaatctaaaatgtagatttttgtttataata 44  Q
    ||||||| ||| ||||||||||||| ||||||||||||||||    
T  9492728 attaattaaataaatctaaaatgtaaatttttgtttataata 9492687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 24694314 - 24694359
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    ||||||||| ||| |||| ||||||| |||||||||||||||||||    
T  24694314 tcattaattaaataaatcaaaaatgttgatttttgtttataatagt 24694359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 46
Target Start/End: Complemental strand, 27224626 - 27224589
Alignment:
Q  9 tgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    ||||| |||||||||||| |||||||||||||||||||    
T  27224626 tgaataaatctaaaatgttgatttttgtttataatagt 27224589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 29389381 - 29389336
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    |||||||||||| ||||||||||| || ||||||| ||||||||||    
T  29389381 tcattaattgaacgaatctaaaatataaatttttgcttataatagt 29389336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 38677619 - 38677574
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    ||||||| ||||||||||||||||||| | ||||| ||||||||||    
T  38677619 tcattaaatgaatgaatctaaaatgtaaacttttgcttataatagt 38677574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 42929060 - 42929015
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    ||||||||||||||||| |||||| |||| ||||| ||||||||||    
T  42929060 tcattaattgaatgaatataaaatttagaattttgcttataatagt 42929015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 46
Target Start/End: Complemental strand, 44382854 - 44382817
Alignment:
Q  9 tgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    ||||||||||| ||||||||||||||| ||||||||||    
T  44382854 tgaatgaatcttaaatgtagatttttgcttataatagt 44382817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 46
Target Start/End: Complemental strand, 48191761 - 48191724
Alignment:
Q  9 tgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    ||||||||||||||||||  ||||||||||||||||||    
T  48191761 tgaatgaatctaaaatgttaatttttgtttataatagt 48191724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 44
Target Start/End: Complemental strand, 51060715 - 51060674
Alignment:
Q  3 attaattgaatgaatctaaaatgtagatttttgtttataata 44  Q
    ||||||||||| ||||||||||||| ||||||| ||||||||    
T  51060715 attaattgaattaatctaaaatgtaaatttttgcttataata 51060674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 52215934 - 52215889
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    |||| ||||| |||||||||||||||| ||||||| ||||||||||    
T  52215934 tcatcaattgcatgaatctaaaatgtaaatttttgcttataatagt 52215889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 46
Target Start/End: Complemental strand, 54595836 - 54595799
Alignment:
Q  9 tgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    |||||||||||||||||| |||||||| ||||||||||    
T  54595836 tgaatgaatctaaaatgttgatttttgcttataatagt 54595799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 39
Target Start/End: Complemental strand, 22099831 - 22099795
Alignment:
Q  3 attaattgaatgaatctaaaatgtagatttttgttta 39  Q
    |||||||||||| |||||||| |||||||||||||||    
T  22099831 attaattgaatgtatctaaaaagtagatttttgttta 22099795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 36362690 - 36362730
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttata 41  Q
    |||||||||||||| |||||||| ||||||||||| |||||    
T  36362690 tcattaattgaatgtatctaaaaagtagatttttgcttata 36362730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 59
Target Start/End: Complemental strand, 40202463 - 40202407
Alignment:
Q  3 attaattgaatgaatctaaaatgtagatttttgtttataatagtcatcagatggtgt 59  Q
    |||||||||||||||  |||||||| ||||||| |||||||||| | |||| |||||    
T  40202463 attaattgaatgaatgcaaaatgtaaatttttgcttataatagttaccagagggtgt 40202407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 36786204 - 36786160
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatag 45  Q
    |||||||||||||||||||||||||| ||||||||||||||||||    
T  36786204 tcattaattgaatgaatctaaaatgttgatttttgtttataatag 36786160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 53
Target Start/End: Original strand, 18881431 - 18881482
Alignment:
Q  2 cattaattgaatgaatctaaaatgtagatttttgtttataatagtcatcaga 53  Q
    |||||||||||||||||||||||||| ||||||| |||||||||| ||||||    
T  18881431 cattaattgaatgaatctaaaatgtatatttttggttataatagtgatcaga 18881482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 46
Target Start/End: Original strand, 38716396 - 38716439
Alignment:
Q  3 attaattgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    ||||||||||||||||||||||||| ||||||||||||||||||    
T  38716396 attaattgaatgaatctaaaatgtaaatttttgtttataatagt 38716439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 14451011 - 14450953
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatagtcatcagatggtgt 59  Q
    ||||||| ||||||||||||||||||||||||||| |||||||||| ||| || |||||    
T  14451011 tcattaaatgaatgaatctaaaatgtagatttttgcttataatagtgatcggagggtgt 14450953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 44
Target Start/End: Complemental strand, 12672499 - 12672458
Alignment:
Q  3 attaattgaatgaatctaaaatgtagatttttgtttataata 44  Q
    ||||||||||||||||||||||||| ||||||||||||||||    
T  12672499 attaattgaatgaatctaaaatgtaaatttttgtttataata 12672458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 46
Target Start/End: Complemental strand, 34616261 - 34616224
Alignment:
Q  9 tgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    ||||||||||||||||||||||||||||||||||||||    
T  34616261 tgaatgaatctaaaatgtagatttttgtttataatagt 34616224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 46
Target Start/End: Original strand, 39160908 - 39160945
Alignment:
Q  9 tgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    ||||||||||||||||||||||||||||||||||||||    
T  39160908 tgaatgaatctaaaatgtagatttttgtttataatagt 39160945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 54713152 - 54713107
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    ||||||| ||||||||||||||||||| ||||||| ||||||||||    
T  54713152 tcattaaatgaatgaatctaaaatgtaaatttttgcttataatagt 54713107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 46
Target Start/End: Complemental strand, 16170963 - 16170919
Alignment:
Q  2 cattaattgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    |||||||||||||||||||||||||| | |||| |||||||||||    
T  16170963 cattaattgaatgaatctaaaatgtaaagttttttttataatagt 16170919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 484033 - 483990
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataata 44  Q
    ||||| ||| |||||||||||||||| |||||||||||||||||    
T  484033 tcattcattaaatgaatctaaaatgttgatttttgtttataata 483990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 21113078 - 21113121
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataata 44  Q
    ||||||||| || |||| ||||||||||||||||||||||||||    
T  21113078 tcattaattaaacgaatataaaatgtagatttttgtttataata 21113121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 3511763 - 3511705
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatagtcatcagatggtgt 59  Q
    ||||||||||||||||||||||||||| | ||||| ||||| |||| ||| || |||||    
T  3511763 tcattaattgaatgaatctaaaatgtaaagttttgcttatattagtgatcggaaggtgt 3511705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 3669610 - 3669552
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatagtcatcagatggtgt 59  Q
    |||||||||||||||||||||||| || || |||| |||||||||| | |||| |||||    
T  3669610 tcattaattgaatgaatctaaaatataaatatttgcttataatagtgaccagagggtgt 3669552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 19934724 - 19934782
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatagtcatcagatggtgt 59  Q
    ||||| |||||||||||||||||  |||||||||| |||||||||| ||| || |||||    
T  19934724 tcatttattgaatgaatctaaaaaatagatttttgcttataatagtgatcggagggtgt 19934782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 46
Target Start/End: Complemental strand, 21142133 - 21142099
Alignment:
Q  12 atgaatctaaaatgtagatttttgtttataatagt 46  Q
    ||||||||||||||| |||||||||||||||||||    
T  21142133 atgaatctaaaatgttgatttttgtttataatagt 21142099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 29006889 - 29006831
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatagtcatcagatggtgt 59  Q
    ||||| |||||||||||||||||  |||||||||| |||||||||| | | ||||||||    
T  29006889 tcatttattgaatgaatctaaaaaatagatttttgcttataatagtgaccggatggtgt 29006831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 34937155 - 34937113
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataat 43  Q
    ||||| ||||||||||| ||||||||| |||||||||||||||    
T  34937155 tcatttattgaatgaatataaaatgtaaatttttgtttataat 34937113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 55
Target Start/End: Original strand, 48603684 - 48603730
Alignment:
Q  9 tgaatgaatctaaaatgtagatttttgtttataatagtcatcagatg 55  Q
    |||||||||||||||||| |||||||||||| |||||| ||| ||||    
T  48603684 tgaatgaatctaaaatgttgatttttgtttacaatagtgatcggatg 48603730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 1829633 - 1829678
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    ||||| ||| |||||||||||||||||| ||| |||||||||||||    
T  1829633 tcatttattaaatgaatctaaaatgtagttttatgtttataatagt 1829678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 16203427 - 16203480
Alignment:
Q  2 cattaattgaatgaatctaaaatgtagatttttgtttataatagtcatcagatg 55  Q
    |||||| | ||| ||||||||||||| |||||||||||||||||| ||| ||||    
T  16203427 cattaaataaataaatctaaaatgtaaatttttgtttataatagtgatcggatg 16203480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 16468290 - 16468335
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    ||||||| ||||| ||||||||||||||||||||  ||||||||||    
T  16468290 tcattaaatgaataaatctaaaatgtagattttttattataatagt 16468335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 20814615 - 20814660
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    ||||| ||||||||||||||||| |||||  |||||||||||||||    
T  20814615 tcatttattgaatgaatctaaaaagtagaaatttgtttataatagt 20814660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 40881513 - 40881558
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    |||||||||||||||||||||| ||| |||||||  ||||||||||    
T  40881513 tcattaattgaatgaatctaaagtgttgatttttaattataatagt 40881558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 46518861 - 46518902
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataa 42  Q
    |||||||||| | |||| ||||||||||||||||||||||||    
T  46518861 tcattaattgtaagaatttaaaatgtagatttttgtttataa 46518902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 46
Target Start/End: Complemental strand, 47181605 - 47181568
Alignment:
Q  9 tgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    ||||||||| ||||||||||||||||| ||||||||||    
T  47181605 tgaatgaatttaaaatgtagatttttgcttataatagt 47181568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 46
Target Start/End: Original strand, 48402505 - 48402542
Alignment:
Q  9 tgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    |||||||||||||||| |||||||||| ||||||||||    
T  48402505 tgaatgaatctaaaatatagatttttgcttataatagt 48402542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 48414942 - 48414979
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgttt 38  Q
    ||||||| ||||| ||||||||||||||||||||||||    
T  48414942 tcattaaatgaataaatctaaaatgtagatttttgttt 48414979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 48603618 - 48603573
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    ||||||||||||| |||||||||| |||||| ||| ||||||||||    
T  48603618 tcattaattgaataaatctaaaatatagattcttgcttataatagt 48603573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 49481934 - 49481889
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    ||||||| ||||||||||||||||||| | ||||| ||||||||||    
T  49481934 tcattaaatgaatgaatctaaaatgtaaacttttgcttataatagt 49481889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 54057697 - 54057656
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataa 42  Q
    ||||| ||||||||||||||||| |||||||||| |||||||    
T  54057697 tcatttattgaatgaatctaaaacgtagatttttatttataa 54057656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 54164899 - 54164944
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    ||||| |||||||||||||||||  |||||||||| ||||||||||    
T  54164899 tcatttattgaatgaatctaaaaaatagatttttgcttataatagt 54164944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 56328536 - 56328581
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    ||||||| |||||||||||||||||||| |||||| ||||| ||||    
T  56328536 tcattaaatgaatgaatctaaaatgtagttttttgcttatattagt 56328581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 46
Target Start/End: Original strand, 56364420 - 56364457
Alignment:
Q  9 tgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    ||||||||||||||||||||||||||  ||||||||||    
T  56364420 tgaatgaatctaaaatgtagatttttacttataatagt 56364457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 6462766 - 6462726
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttata 41  Q
    ||||| |||||||||| |||||| |||||||||||||||||    
T  6462766 tcatttattgaatgaacctaaaaagtagatttttgtttata 6462726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 18488618 - 18488658
Alignment:
Q  13 tgaatctaaaatgtagatttttgtttataatagtcatcaga 53  Q
    |||||||||||||| |||||||| |||||||||| ||||||    
T  18488618 tgaatctaaaatgtcgatttttgcttataatagtgatcaga 18488658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 40952437 - 40952477
Alignment:
Q  4 ttaattgaatgaatctaaaatgtagatttttgtttataata 44  Q
    ||||||||||||||||||||| || ||||||| ||||||||    
T  40952437 ttaattgaatgaatctaaaatataaatttttgcttataata 40952477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 46
Target Start/End: Original strand, 53176395 - 53176439
Alignment:
Q  2 cattaattgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    |||||| |||||||||||||||| || ||||||| ||||||||||    
T  53176395 cattaactgaatgaatctaaaatataaatttttgcttataatagt 53176439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 46
Target Start/End: Original strand, 15549413 - 15549456
Alignment:
Q  3 attaattgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  15549413 attaattgaatgaatctaaaatgttgatttttgtttataatagt 15549456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 71313 - 71268
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    |||||||||||||||||||||||| |||||||||| ||||||||||    
T  71313 tcattaattgaatgaatctaaaatatagatttttgcttataatagt 71268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 32398089 - 32398134
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    ||||||||||||||||| |||||| |||||||||||||||||||||    
T  32398089 tcattaattgaatgaatttaaaatatagatttttgtttataatagt 32398134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 14153423 - 14153365
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatagtcatcagatggtgt 59  Q
    ||||||| ||||||||| ||||| ||||||||||| |||||||||| | ||||||||||    
T  14153423 tcattaaatgaatgaatataaaaagtagatttttgcttataatagtgaccagatggtgt 14153365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 42
Target Start/End: Original strand, 29177800 - 29177838
Alignment:
Q  4 ttaattgaatgaatctaaaatgtagatttttgtttataa 42  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  29177800 ttaattgaatgaatctaaaatgtaaatttttgtttataa 29177838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 37067851 - 37067909
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatagtcatcagatggtgt 59  Q
    ||||||||| | ||||||||||||||||||||||| |||||||||| | || |||||||    
T  37067851 tcattaattaattgaatctaaaatgtagatttttgcttataatagtaaccaaatggtgt 37067909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 11795790 - 11795745
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    |||||||||||||||||||||||||| |||||||| ||||| ||||    
T  11795790 tcattaattgaatgaatctaaaatgttgatttttgcttatattagt 11795745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 18033441 - 18033486
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    ||||||| ||||| ||||||||||||||||||||| ||||||||||    
T  18033441 tcattaaatgaataaatctaaaatgtagatttttgcttataatagt 18033486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 9 - 46
Target Start/End: Original strand, 18652859 - 18652896
Alignment:
Q  9 tgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    |||||||||||||||||| |||||||||||||||||||    
T  18652859 tgaatgaatctaaaatgttgatttttgtttataatagt 18652896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 26045319 - 26045274
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    |||||||||||||||||||||||| || ||||||| ||||||||||    
T  26045319 tcattaattgaatgaatctaaaatataaatttttgcttataatagt 26045274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 25941757 - 25941809
Alignment:
Q  3 attaattgaatgaatctaaaatgtagatttttgtttataatagtcatcagatg 55  Q
    ||||||||||||||  |||||| | ||||||||||||||||||| ||||||||    
T  25941757 attaattgaatgaacttaaaatattgatttttgtttataatagtgatcagatg 25941809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 46
Target Start/End: Original strand, 26045315 - 26045350
Alignment:
Q  11 aatgaatctaaaatgtagatttttgtttataatagt 46  Q
    |||||||||||||||| |||||||||||||||||||    
T  26045315 aatgaatctaaaatgttgatttttgtttataatagt 26045350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 3 - 46
Target Start/End: Complemental strand, 28518770 - 28518727
Alignment:
Q  3 attaattgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    |||||||||||||||| ||||||| |||||||| ||||||||||    
T  28518770 attaattgaatgaatccaaaatgttgatttttgcttataatagt 28518727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 3 - 42
Target Start/End: Original strand, 35032358 - 35032397
Alignment:
Q  3 attaattgaatgaatctaaaatgtagatttttgtttataa 42  Q
    ||||||||||||||||||||||||| ||||||| ||||||    
T  35032358 attaattgaatgaatctaaaatgtaaatttttgcttataa 35032397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 59
Target Start/End: Original strand, 17625734 - 17625784
Alignment:
Q  9 tgaatgaatctaaaatgtagatttttgtttataatagtcatcagatggtgt 59  Q
    |||||| |||||||| || |||||||| |||||||||| ||||||||||||    
T  17625734 tgaatgtatctaaaacgttgatttttgcttataatagtgatcagatggtgt 17625784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 36895091 - 36895033
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatagtcatcagatggtgt 59  Q
    ||||||||| ||| ||| ||||||||||| |||||||||||||||| ||| || |||||    
T  36895091 tcattaattaaataaatttaaaatgtagaattttgtttataatagtgatcggagggtgt 36895033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 53
Target Start/End: Complemental strand, 41814435 - 41814385
Alignment:
Q  3 attaattgaatgaatctaaaatgtagatttttgtttataatagtcatcaga 53  Q
    ||||||||||||||||||||||||| |||||||  ||||||| | ||||||    
T  41814435 attaattgaatgaatctaaaatgtaaatttttgcctataataatgatcaga 41814385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 3100459 - 3100414
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    ||||| ||||||||||||||||||||  ||||||| ||||||||||    
T  3100459 tcatttattgaatgaatctaaaatgttaatttttgcttataatagt 3100414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 3100491 - 3100536
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    ||||||||||||||||||||||||||| |||||   ||||||||||    
T  3100491 tcattaattgaatgaatctaaaatgtaaattttcacttataatagt 3100536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 4082824 - 4082869
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    ||||| ||||||| ||||||||||||  ||||||||||||||||||    
T  4082824 tcatttattgaataaatctaaaatgtgaatttttgtttataatagt 4082869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 5259471 - 5259516
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    ||||||| |||||||||||||||||||| |||||| ||||| ||||    
T  5259471 tcattaaatgaatgaatctaaaatgtagttttttgcttatattagt 5259516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 20518257 - 20518302
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    ||||||| ||||||||| ||||| ||||||||||| ||||||||||    
T  20518257 tcattaaatgaatgaatgtaaaaagtagatttttgcttataatagt 20518302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 26141809 - 26141764
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    ||||||| ||||||||||||||||||| | ||||| ||||||||||    
T  26141809 tcattaaatgaatgaatctaaaatgtaaacttttgcttataatagt 26141764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 43482858 - 43482903
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    ||||||| ||||| ||| ||||||||| ||||||||||||||||||    
T  43482858 tcattaaatgaataaatataaaatgtaaatttttgtttataatagt 43482903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 46
Target Start/End: Original strand, 17153518 - 17153554
Alignment:
Q  10 gaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    |||||||| |||||| |||||||||||||||||||||    
T  17153518 gaatgaatttaaaatatagatttttgtttataatagt 17153554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 25773329 - 25773369
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttata 41  Q
    ||||||||||| ||||| ||||||||| |||||||||||||    
T  25773329 tcattaattgattgaatgtaaaatgtaaatttttgtttata 25773369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 32630460 - 32630417
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataata 44  Q
    |||||||||||||||||| |||||||||||||||||||||||||    
T  32630460 tcattaattgaatgaatccaaaatgtagatttttgtttataata 32630417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 8740573 - 8740528
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||    
T  8740573 tcattaaatgaatgaatctaaaatgtagatttttgcttataatagt 8740528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 26003521 - 26003562
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataa 42  Q
    ||||||||||||||||||||||||||||||||||| ||||||    
T  26003521 tcattaattgaatgaatctaaaatgtagatttttgcttataa 26003562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 27331845 - 27331890
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||    
T  27331845 tcattaattgaatgaatctaaaatgttgatttttgcttataatagt 27331890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 38465875 - 38465920
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    ||||||||||||||||||||||||||||||||||| ||| ||||||    
T  38465875 tcattaattgaatgaatctaaaatgtagatttttgcttacaatagt 38465920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 15859637 - 15859680
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataata 44  Q
    |||||||||||||||||||||||| |||||||||| ||||||||    
T  15859637 tcattaattgaatgaatctaaaatatagatttttgcttataata 15859680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 43732192 - 43732149
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataata 44  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||    
T  43732192 tcattaattgaatgaatctaaaatgtatatttttgcttataata 43732149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 46
Target Start/End: Original strand, 3121511 - 3121553
Alignment:
Q  4 ttaattgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    ||||||||||| |||||||||||||||||||| ||||||||||    
T  3121511 ttaattgaatggatctaaaatgtagatttttgcttataatagt 3121553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 9 - 46
Target Start/End: Original strand, 3098220 - 3098257
Alignment:
Q  9 tgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  3098220 tgaatgaatctaaaatgtagatttttgcttataatagt 3098257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 11342056 - 11342101
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    ||||||||| |||||||||||||| |||||||||| ||||||||||    
T  11342056 tcattaattaaatgaatctaaaatatagatttttgcttataatagt 11342101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 15119863 - 15119908
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    ||||||| ||||| ||||||||||||||||||||| ||||||||||    
T  15119863 tcattaaatgaataaatctaaaatgtagatttttgcttataatagt 15119908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 19951531 - 19951576
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    ||||||||||||||||| |||||| | |||||||||||||||||||    
T  19951531 tcattaattgaatgaatataaaatattgatttttgtttataatagt 19951576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 9 - 46
Target Start/End: Original strand, 25270950 - 25270987
Alignment:
Q  9 tgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  25270950 tgaatgaatctaaaatgtagatttttgcttataatagt 25270987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 38181846 - 38181891
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    ||||||||||||||||| |||||||||| |||||| ||||||||||    
T  38181846 tcattaattgaatgaatgtaaaatgtagttttttgcttataatagt 38181891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 9 - 46
Target Start/End: Original strand, 41056982 - 41057019
Alignment:
Q  9 tgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  41056982 tgaatgaatctaaaatgtagatttttgcttataatagt 41057019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 8383237 - 8383197
Alignment:
Q  3 attaattgaatgaatctaaaatgtagatttttgtttataat 43  Q
    ||||| |||||||||||||||| ||||||||||||||||||    
T  8383237 attaaatgaatgaatctaaaatatagatttttgtttataat 8383197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 46
Target Start/End: Complemental strand, 44868565 - 44868521
Alignment:
Q  2 cattaattgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    |||||||||||| ||| |||||||| |||||||||||||||||||    
T  44868565 cattaattgaataaatttaaaatgttgatttttgtttataatagt 44868521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 42
Target Start/End: Original strand, 6166115 - 6166150
Alignment:
Q  7 attgaatgaatctaaaatgtagatttttgtttataa 42  Q
    ||||||||||| ||||||||||||||||||||||||    
T  6166115 attgaatgaatttaaaatgtagatttttgtttataa 6166150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 46
Target Start/End: Original strand, 13333543 - 13333578
Alignment:
Q  11 aatgaatctaaaatgtagatttttgtttataatagt 46  Q
    ||||||||||||||||||||||||| ||||||||||    
T  13333543 aatgaatctaaaatgtagatttttgcttataatagt 13333578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 40187329 - 40187372
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataata 44  Q
    ||||||| ||||| ||||||||||||| ||||||||||||||||    
T  40187329 tcattaactgaatcaatctaaaatgtaaatttttgtttataata 40187372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 59
Target Start/End: Original strand, 1961403 - 1961453
Alignment:
Q  9 tgaatgaatctaaaatgtagatttttgtttataatagtcatcagatggtgt 59  Q
    |||||||||||||||||| |||||||| |||||||||| | | ||||||||    
T  1961403 tgaatgaatctaaaatgttgatttttgcttataatagtgacccgatggtgt 1961453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 3887887 - 3887829
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatagtcatcagatggtgt 59  Q
    |||||||||||||| ||||||||  |||||||||| ||||| |||| |||||| |||||    
T  3887887 tcattaattgaatgtatctaaaaaatagatttttgcttatattagtgatcagagggtgt 3887829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 59
Target Start/End: Complemental strand, 13333493 - 13333443
Alignment:
Q  9 tgaatgaatctaaaatgtagatttttgtttataatagtcatcagatggtgt 59  Q
    |||||| |||||||| || |||||||| |||||||||| ||||||||||||    
T  13333493 tgaatgtatctaaaacgttgatttttgcttataatagtgatcagatggtgt 13333443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 40
Target Start/End: Complemental strand, 35438671 - 35438633
Alignment:
Q  2 cattaattgaatgaatctaaaatgtagatttttgtttat 40  Q
    ||||||||||||||||||||||| |||||||||| ||||    
T  35438671 cattaattgaatgaatctaaaatatagatttttgcttat 35438633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 5574196 - 5574241
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    |||||||||||||| |||||||| ||||||||||| ||||| ||||    
T  5574196 tcattaattgaatgtatctaaaaagtagatttttgcttatattagt 5574241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 19612995 - 19612950
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    ||||||| |||||||||||||||| |||||||||| ||||| ||||    
T  19612995 tcattaaatgaatgaatctaaaatatagatttttgcttatattagt 19612950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 20504297 - 20504252
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    |||||||||||||  |||||||| ||||||||||||||||| ||||    
T  20504297 tcattaattgaatatatctaaaaagtagatttttgtttatattagt 20504252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 26234110 - 26234155
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    ||||||| ||||||||||||||||||| | ||||| ||||||||||    
T  26234110 tcattaaatgaatgaatctaaaatgtaaacttttgcttataatagt 26234155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 46
Target Start/End: Complemental strand, 31024217 - 31024180
Alignment:
Q  9 tgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    |||||||||||||||||| |||||||| ||||||||||    
T  31024217 tgaatgaatctaaaatgttgatttttgcttataatagt 31024180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 40204494 - 40204449
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    ||||||||||||||||| || ||| |||||||||| ||||||||||    
T  40204494 tcattaattgaatgaatgtataatatagatttttgcttataatagt 40204449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 44274596 - 44274551
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    ||||| ||||||||||||||||||||  | ||||||||||||||||    
T  44274596 tcatttattgaatgaatctaaaatgtcaacttttgtttataatagt 44274551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 44
Target Start/End: Complemental strand, 36001828 - 36001792
Alignment:
Q  8 ttgaatgaatctaaaatgtagatttttgtttataata 44  Q
    |||||||||||||||||||  ||||||||||||||||    
T  36001828 ttgaatgaatctaaaatgttaatttttgtttataata 36001792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 36547395 - 36547343
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatagtcatcaga 53  Q
    ||||| ||| ||||||| ||||||||  |||||||||||||||||| ||||||    
T  36547395 tcatttattaaatgaatttaaaatgtcaatttttgtttataatagtaatcaga 36547343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 88940 - 88990
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatagtcatca 51  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||| ||||    
T  88940 tcattaattgaatgaatataaaatatagatttttgtttataatagtaatca 88990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 38; Significance: 0.000000000002; HSPs: 3)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 7743 - 7788
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||    
T  7743 tcattaaatgaatgaatctaaaatgtagatttttgcttataatagt 7788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 146054 - 146098
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatag 45  Q
    ||||||||||||||||||||||||| | |||||||||||||||||    
T  146054 tcattaattgaatgaatctaaaatgcaaatttttgtttataatag 146098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 46
Target Start/End: Complemental strand, 146014 - 145977
Alignment:
Q  9 tgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    |||||||||||||||||  |||||||||||||||||||    
T  146014 tgaatgaatctaaaatgatgatttttgtttataatagt 145977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 61248 - 61293
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    |||||||||||||| ||||||||||| |||||||||||||| ||||    
T  61248 tcattaattgaatgtatctaaaatgtggatttttgtttatattagt 61293  T

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Target: scaffold0065 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 9 - 44
Target Start/End: Original strand, 36948 - 36983
Alignment:
Q  9 tgaatgaatctaaaatgtagatttttgtttataata 44  Q
    |||||||||||||||||| |||||||||||||||||    
T  36948 tgaatgaatctaaaatgttgatttttgtttataata 36983  T

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Target: scaffold0341 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0341
Description:

Target: scaffold0341; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 2474 - 2429
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    ||||||| ||||||||||||| ||||| ||||||| ||||||||||    
T  2474 tcattaaatgaatgaatctaagatgtaaatttttgcttataatagt 2429  T

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Target: scaffold0341; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 10129 - 10084
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    ||||||| ||||||||||||| ||||| ||||||| ||||||||||    
T  10129 tcattaaatgaatgaatctaagatgtaaatttttgcttataatagt 10084  T

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Target: scaffold0039 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 54442 - 54397
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttataatagt 46  Q
    |||||||||||||| |||||||| ||||||||||| ||||| ||||    
T  54442 tcattaattgaatgtatctaaaaagtagatttttgcttatattagt 54397  T

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Target: scaffold0007 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 246881 - 246921
Alignment:
Q  1 tcattaattgaatgaatctaaaatgtagatttttgtttata 41  Q
    |||||||||||||| |||||||| ||||||||||| |||||    
T  246881 tcattaattgaatgtatctaaaaagtagatttttgcttata 246921  T

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