View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20414_high_4 (Length: 347)

Name: NF20414_high_4
Description: NF20414
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20414_high_4
NF20414_high_4
[»] chr3 (41 HSPs)
chr3 (1-347)||(7928452-7928800)
chr3 (287-343)||(11251984-11252040)
chr3 (273-346)||(49505135-49505210)
chr3 (286-347)||(8383259-8383322)
chr3 (304-347)||(10690276-10690319)
chr3 (268-330)||(11507451-11507515)
chr3 (287-347)||(3618883-3618943)
chr3 (292-347)||(2620055-2620110)
chr3 (304-347)||(11493375-11493418)
chr3 (296-347)||(25064911-25064962)
chr3 (300-343)||(27277848-27277891)
chr3 (304-347)||(34307794-34307837)
chr3 (292-343)||(25948887-25948940)
chr3 (294-347)||(5441035-5441088)
chr3 (286-342)||(8412941-8412997)
chr3 (286-339)||(8789544-8789599)
chr3 (291-347)||(15544695-15544751)
chr3 (286-343)||(45451559-45451618)
chr3 (304-347)||(5407261-5407304)
chr3 (304-347)||(8039849-8039892)
chr3 (304-343)||(9624647-9624686)
chr3 (304-343)||(11313814-11313853)
chr3 (304-347)||(12704009-12704052)
chr3 (304-347)||(16192764-16192807)
chr3 (304-347)||(32804554-32804597)
chr3 (305-343)||(4987306-4987344)
chr3 (305-347)||(4990982-4991024)
chr3 (292-343)||(10455796-10455849)
chr3 (305-343)||(26508116-26508154)
chr3 (305-343)||(28918007-28918045)
chr3 (286-329)||(40993329-40993374)
chr3 (287-333)||(6780414-6780462)
chr3 (304-341)||(14840305-14840342)
chr3 (306-343)||(14979187-14979224)
chr3 (304-345)||(15812835-15812876)
chr3 (287-341)||(20691327-20691383)
chr3 (287-333)||(25093518-25093566)
chr3 (305-342)||(34910324-34910361)
chr3 (304-344)||(1438809-1438849)
chr3 (303-347)||(24633768-24633812)
chr3 (304-344)||(32429394-32429434)
[»] chr2 (39 HSPs)
chr2 (265-346)||(34691778-34691861)
chr2 (265-346)||(34714190-34714273)
chr2 (267-329)||(19536372-19536436)
chr2 (300-347)||(18276523-18276570)
chr2 (304-347)||(21616764-21616807)
chr2 (292-343)||(21782820-21782871)
chr2 (292-341)||(2331802-2331851)
chr2 (291-347)||(28677911-28677968)
chr2 (295-347)||(28412352-28412404)
chr2 (286-342)||(5367199-5367257)
chr2 (304-347)||(23718028-23718071)
chr2 (304-347)||(24105700-24105743)
chr2 (304-347)||(37411258-37411301)
chr2 (304-347)||(39279677-39279720)
chr2 (304-347)||(44860322-44860365)
chr2 (293-347)||(1327980-1328034)
chr2 (293-347)||(36409630-36409684)
chr2 (287-347)||(30298444-30298504)
chr2 (286-347)||(31018592-31018655)
chr2 (294-341)||(4332934-4332981)
chr2 (265-329)||(18255953-18256019)
chr2 (293-345)||(18889592-18889646)
chr2 (287-331)||(20242722-20242768)
chr2 (304-347)||(25846743-25846786)
chr2 (304-347)||(31808079-31808122)
chr2 (304-347)||(42832290-42832333)
chr2 (286-341)||(5473336-5473393)
chr2 (304-346)||(23921256-23921298)
chr2 (305-343)||(30717545-30717583)
chr2 (305-347)||(39323266-39323308)
chr2 (294-347)||(2665892-2665945)
chr2 (292-342)||(18622613-18622665)
chr2 (306-347)||(22084848-22084889)
chr2 (304-341)||(35449521-35449558)
chr2 (272-341)||(43996895-43996964)
chr2 (286-343)||(2438713-2438772)
chr2 (307-347)||(10535776-10535816)
chr2 (307-347)||(29970566-29970606)
chr2 (305-341)||(30404865-30404901)
[»] chr8 (27 HSPs)
chr8 (286-347)||(37283806-37283867)
chr8 (265-347)||(34897087-34897171)
chr8 (286-343)||(3025557-3025616)
chr8 (304-347)||(4611536-4611579)
chr8 (287-343)||(13844591-13844649)
chr8 (304-347)||(24362216-24362259)
chr8 (304-347)||(39954293-39954336)
chr8 (304-342)||(14134706-14134744)
chr8 (310-347)||(18067954-18067991)
chr8 (265-343)||(12606800-12606882)
chr8 (286-343)||(31236571-31236630)
chr8 (286-342)||(4948659-4948717)
chr8 (304-347)||(7658465-7658508)
chr8 (304-343)||(14731718-14731757)
chr8 (304-347)||(20679409-20679452)
chr8 (305-340)||(40332200-40332235)
chr8 (290-341)||(4786336-4786389)
chr8 (294-341)||(11803267-11803316)
chr8 (304-342)||(13203648-13203686)
chr8 (305-343)||(25566847-25566885)
chr8 (286-347)||(26714080-26714141)
chr8 (286-341)||(33405378-33405435)
chr8 (304-341)||(11927100-11927137)
chr8 (287-341)||(12985400-12985456)
chr8 (294-343)||(29776042-29776091)
chr8 (1-34)||(30011751-30011784)
chr8 (3-31)||(2309177-2309205)
[»] chr7 (39 HSPs)
chr7 (294-347)||(29787373-29787426)
chr7 (272-343)||(3721099-3721172)
chr7 (287-347)||(20549793-20549855)
chr7 (304-347)||(22868044-22868087)
chr7 (292-347)||(30731039-30731094)
chr7 (302-344)||(2424619-2424661)
chr7 (306-347)||(32308122-32308163)
chr7 (302-346)||(14729704-14729748)
chr7 (286-343)||(25481908-25481967)
chr7 (286-347)||(26733306-26733369)
chr7 (300-343)||(12289120-12289163)
chr7 (269-341)||(38143231-38143305)
chr7 (304-346)||(17851434-17851476)
chr7 (305-347)||(23191898-23191940)
chr7 (288-347)||(32287459-32287520)
chr7 (288-341)||(9756984-9757037)
chr7 (286-344)||(21880157-21880217)
chr7 (1-34)||(36853107-36853140)
chr7 (304-344)||(1401030-1401070)
chr7 (304-347)||(5548678-5548721)
chr7 (300-347)||(11700805-11700852)
chr7 (304-347)||(19206052-19206095)
chr7 (304-343)||(19992007-19992046)
chr7 (304-347)||(27093427-27093470)
chr7 (304-347)||(27184831-27184874)
chr7 (287-347)||(28155572-28155634)
chr7 (289-344)||(9482939-9482996)
chr7 (305-343)||(24339648-24339686)
chr7 (305-343)||(26033476-26033514)
chr7 (305-347)||(27945043-27945085)
chr7 (305-343)||(30813818-30813856)
chr7 (304-341)||(10377515-10377552)
chr7 (304-341)||(16341504-16341541)
chr7 (292-338)||(17307904-17307952)
chr7 (304-333)||(22602724-22602753)
chr7 (286-347)||(8090019-8090082)
chr7 (286-331)||(18213027-18213074)
chr7 (292-341)||(35297672-35297723)
chr7 (286-331)||(39138462-39138509)
[»] chr6 (49 HSPs)
chr6 (286-347)||(31579221-31579282)
chr6 (267-347)||(5732485-5732567)
chr6 (265-341)||(426487-426565)
chr6 (287-347)||(7265588-7265650)
chr6 (286-347)||(19040354-19040417)
chr6 (290-347)||(32511664-32511723)
chr6 (268-347)||(13851738-13851819)
chr6 (268-347)||(20371086-20371167)
chr6 (294-343)||(8805576-8805625)
chr6 (286-347)||(7377981-7378044)
chr6 (304-343)||(9025508-9025547)
chr6 (304-347)||(9658881-9658924)
chr6 (304-347)||(30866158-30866201)
chr6 (292-342)||(34290079-34290129)
chr6 (299-347)||(13360381-13360429)
chr6 (304-344)||(34073361-34073401)
chr6 (304-347)||(1532242-1532285)
chr6 (304-347)||(5462688-5462731)
chr6 (269-329)||(7027262-7027323)
chr6 (304-343)||(7086801-7086840)
chr6 (268-347)||(7151414-7151498)
chr6 (304-343)||(7996392-7996431)
chr6 (304-343)||(8022370-8022409)
chr6 (286-342)||(8776967-8777025)
chr6 (304-347)||(9027180-9027223)
chr6 (304-347)||(9629385-9629428)
chr6 (304-347)||(17341678-17341721)
chr6 (287-343)||(21924930-21924988)
chr6 (304-343)||(26562695-26562734)
chr6 (294-341)||(29049893-29049940)
chr6 (286-342)||(34595141-34595199)
chr6 (304-346)||(6665216-6665258)
chr6 (304-346)||(9617437-9617479)
chr6 (287-342)||(12627572-12627629)
chr6 (305-343)||(16766703-16766741)
chr6 (300-342)||(34225819-34225861)
chr6 (304-341)||(7569182-7569219)
chr6 (269-342)||(7801132-7801208)
chr6 (305-342)||(10770689-10770726)
chr6 (304-333)||(11591884-11591913)
chr6 (305-342)||(31384927-31384964)
chr6 (305-341)||(5970123-5970159)
chr6 (307-347)||(10842534-10842574)
chr6 (286-339)||(13364699-13364754)
chr6 (304-340)||(16388247-16388283)
chr6 (286-322)||(18586399-18586435)
chr6 (286-343)||(28152105-28152163)
chr6 (286-343)||(28715301-28715360)
chr6 (286-343)||(33001283-33001342)
[»] chr5 (30 HSPs)
chr5 (286-347)||(28588668-28588731)
chr5 (286-347)||(30502382-30502445)
chr5 (286-347)||(30542725-30542788)
chr5 (286-342)||(6770550-6770606)
chr5 (304-347)||(3966505-3966548)
chr5 (304-343)||(6471903-6471942)
chr5 (304-346)||(17593736-17593778)
chr5 (305-347)||(27932237-27932279)
chr5 (1-34)||(36639762-36639795)
chr5 (286-347)||(34879352-34879415)
chr5 (286-342)||(6247629-6247687)
chr5 (287-343)||(21191051-21191109)
chr5 (286-338)||(21194199-21194253)
chr5 (304-347)||(27144465-27144508)
chr5 (304-347)||(36838545-36838588)
chr5 (304-343)||(41091271-41091310)
chr5 (304-346)||(5467992-5468034)
chr5 (288-343)||(16203791-16203848)
chr5 (306-344)||(19438348-19438386)
chr5 (305-343)||(21576760-21576798)
chr5 (304-338)||(24273044-24273078)
chr5 (304-338)||(24389136-24389170)
chr5 (304-346)||(30098329-30098371)
chr5 (304-342)||(35017044-35017082)
chr5 (305-343)||(39698547-39698585)
chr5 (304-333)||(23016003-23016032)
chr5 (1-34)||(35035597-35035630)
chr5 (304-344)||(12927659-12927699)
chr5 (286-339)||(18421835-18421890)
chr5 (286-343)||(21194117-21194176)
[»] chr4 (32 HSPs)
chr4 (286-347)||(8423712-8423775)
chr4 (300-347)||(16189711-16189758)
chr4 (304-347)||(903924-903967)
chr4 (287-342)||(17425386-17425441)
chr4 (304-347)||(22440614-22440657)
chr4 (304-347)||(36635326-36635369)
chr4 (304-347)||(40613452-40613495)
chr4 (286-342)||(54580017-54580075)
chr4 (300-343)||(56257939-56257982)
chr4 (300-346)||(16184820-16184866)
chr4 (306-347)||(38148741-38148782)
chr4 (304-347)||(1747214-1747257)
chr4 (300-339)||(2234260-2234299)
chr4 (291-343)||(15029771-15029825)
chr4 (308-347)||(30522933-30522972)
chr4 (304-347)||(30982892-30982935)
chr4 (305-343)||(11596367-11596405)
chr4 (269-347)||(17446073-17446146)
chr4 (305-343)||(28964263-28964301)
chr4 (305-343)||(29205450-29205488)
chr4 (303-341)||(32910559-32910597)
chr4 (292-342)||(49652974-49653024)
chr4 (304-341)||(5775372-5775409)
chr4 (293-339)||(18576038-18576086)
chr4 (304-341)||(24343515-24343552)
chr4 (287-345)||(33950140-33950200)
chr4 (304-340)||(9996849-9996885)
chr4 (295-343)||(16886615-16886663)
chr4 (286-343)||(23292980-23293039)
chr4 (314-346)||(34200295-34200327)
chr4 (304-347)||(35723398-35723442)
chr4 (288-341)||(36386207-36386262)
[»] chr1 (53 HSPs)
chr1 (287-343)||(25452145-25452201)
chr1 (286-347)||(36878463-36878526)
chr1 (279-347)||(9709822-9709892)
chr1 (287-341)||(2288164-2288218)
chr1 (292-347)||(6427352-6427409)
chr1 (292-347)||(20157350-20157407)
chr1 (265-347)||(398742-398822)
chr1 (286-343)||(13436464-13436523)
chr1 (293-346)||(27471567-27471622)
chr1 (304-347)||(5898280-5898323)
chr1 (304-347)||(25098569-25098612)
chr1 (304-347)||(34298438-34298481)
chr1 (304-347)||(34371716-34371758)
chr1 (304-347)||(36905999-36906042)
chr1 (287-347)||(39953141-39953203)
chr1 (304-343)||(40181877-40181916)
chr1 (286-341)||(1864874-1864931)
chr1 (309-347)||(2896140-2896178)
chr1 (304-342)||(7918225-7918263)
chr1 (305-343)||(31015049-31015087)
chr1 (306-343)||(12443476-12443513)
chr1 (304-345)||(44482234-44482275)
chr1 (286-347)||(14332636-14332699)
chr1 (307-347)||(17831548-17831588)
chr1 (307-347)||(26238129-26238169)
chr1 (286-347)||(41877464-41877527)
chr1 (304-343)||(1486723-1486762)
chr1 (304-347)||(10233255-10233298)
chr1 (265-330)||(17705555-17705626)
chr1 (304-339)||(19324572-19324607)
chr1 (304-339)||(25361896-25361931)
chr1 (287-331)||(30749858-30749904)
chr1 (287-331)||(30771309-30771355)
chr1 (279-343)||(31672882-31672948)
chr1 (304-347)||(38503322-38503365)
chr1 (305-343)||(113305-113343)
chr1 (305-347)||(5376515-5376557)
chr1 (292-347)||(9828046-9828103)
chr1 (305-347)||(10572604-10572646)
chr1 (309-347)||(19909299-19909337)
chr1 (288-343)||(38075966-38076023)
chr1 (309-347)||(40285673-40285711)
chr1 (300-329)||(9033017-9033046)
chr1 (310-347)||(10474997-10475034)
chr1 (286-342)||(14248837-14248891)
chr1 (305-342)||(24577201-24577238)
chr1 (299-343)||(1262890-1262934)
chr1 (287-340)||(18337338-18337393)
chr1 (286-343)||(22515881-22515940)
chr1 (294-343)||(23738684-23738735)
chr1 (286-347)||(28674802-28674865)
chr1 (286-343)||(38078655-38078714)
chr1 (305-341)||(40258948-40258984)
[»] scaffold0123 (1 HSPs)
scaffold0123 (304-347)||(44539-44582)
[»] scaffold0027 (1 HSPs)
scaffold0027 (265-341)||(46690-46767)
[»] scaffold0044 (1 HSPs)
scaffold0044 (304-346)||(53183-53225)
[»] scaffold0004 (1 HSPs)
scaffold0004 (305-347)||(92809-92851)
[»] scaffold0020 (1 HSPs)
scaffold0020 (304-343)||(135326-135365)
[»] scaffold0008 (1 HSPs)
scaffold0008 (304-343)||(263386-263425)
[»] scaffold0223 (1 HSPs)
scaffold0223 (305-343)||(20178-20216)
[»] scaffold0103 (1 HSPs)
scaffold0103 (305-343)||(51817-51855)
[»] scaffold0050 (1 HSPs)
scaffold0050 (286-341)||(70286-70343)
[»] scaffold0049 (1 HSPs)
scaffold0049 (305-347)||(63775-63817)
[»] scaffold0036 (1 HSPs)
scaffold0036 (304-342)||(9761-9799)
[»] scaffold0361 (1 HSPs)
scaffold0361 (305-342)||(14537-14574)
[»] scaffold0306 (1 HSPs)
scaffold0306 (305-342)||(13407-13444)
[»] scaffold0152 (1 HSPs)
scaffold0152 (305-342)||(21883-21920)
[»] scaffold0022 (1 HSPs)
scaffold0022 (304-341)||(90851-90888)
[»] scaffold0652 (1 HSPs)
scaffold0652 (286-343)||(456-515)
[»] scaffold0230 (1 HSPs)
scaffold0230 (286-322)||(6107-6143)


Alignment Details
Target: chr3 (Bit Score: 306; Significance: 1e-172; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 306; E-Value: 1e-172
Query Start/End: Original strand, 1 - 347
Target Start/End: Complemental strand, 7928800 - 7928452
Alignment:
Q  1 caatcatatgtgtgactttagaagtagttatgatgctaataccattggaaggtttaaggaatgtttaatccatcgagggtgggccttggttatgatagta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  7928800 caatcatatgtgtgactttagaagtagttatgatgctaataccattggaaggtttaaggaatgtttaatccattgagggtgggccttggttatgatagta 7928701  T
Q  101 gaatttcatttccctatttagagaacctatgatttccttgacatcagatagcaattccaatggttgcacaggtgcaatcagactaaacctattattatac 200  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  7928700 gaatttcatttccctatttagaaaacctatgatttccttgacatcagatagcaattccaatggttgcacaggtgcaatcagactaaacctattaatatac 7928601  T
Q  201 aatatcaatgaaaaactatacttatctacgagtttctaactatgatgtattgaattaggcctaaacggacactcctcagattaggcgtgtccgacaccaa 300  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |    
T  7928600 aatatcaatgaaaaactatacttatctacgagttcctaactatgatgtactgaattaggcctaaacggacactcctcagattaggcgtgtccgacaccga 7928501  T
Q  301 cac--ataattacactgaattatgtgattttctcatattattagcggtg 347  Q
    |||  |||||||||||||||||||||||||| ||| |||||||||||||    
T  7928500 cacatataattacactgaattatgtgattttttcaaattattagcggtg 7928452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 287 - 343
Target Start/End: Complemental strand, 11252040 - 11251984
Alignment:
Q  287 gtgtccgacaccaacacataattacactgaattatgtgattttctcatattattagc 343  Q
    ||||| |||||| |||||||||||||||||||||||||||||||||| |||||||||    
T  11252040 gtgtctgacaccgacacataattacactgaattatgtgattttctcaaattattagc 11251984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 273 - 346
Target Start/End: Original strand, 49505135 - 49505210
Alignment:
Q  273 tcctcagattaggcgtgtccgacaccaacacata--attacactgaattatgtgattttctcatattattagcggt 346  Q
    ||||||| |||||||||||||||||  |||||||  |||||||| |||||||||||||||||| ||||||||||||    
T  49505135 tcctcaggttaggcgtgtccgacactgacacatataattacactaaattatgtgattttctcaaattattagcggt 49505210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 286 - 347
Target Start/End: Complemental strand, 8383322 - 8383259
Alignment:
Q  286 cgtgtccgacaccaacac--ataattacactgaattatgtgattttctcatattattagcggtg 347  Q
    ||||||||||||| ||||  |||||||||||||||||| ||||||||||| |||||||||||||    
T  8383322 cgtgtccgacaccgacacttataattacactgaattatatgattttctcaaattattagcggtg 8383259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 304 - 347
Target Start/End: Original strand, 10690276 - 10690319
Alignment:
Q  304 ataattacactgaattatgtgattttctcatattattagcggtg 347  Q
    |||||||||||||||||||||||||||||| |||||||||||||    
T  10690276 ataattacactgaattatgtgattttctcagattattagcggtg 10690319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 268 - 330
Target Start/End: Original strand, 11507451 - 11507515
Alignment:
Q  268 gacactcctcagattaggcgtgtccgacacc--aacacataattacactgaattatgtgattttc 330  Q
    ||||||||| |||||| |||||||||| |||  |||| |||||||||||||||||||||||||||    
T  11507451 gacactcctaagattacgcgtgtccgataccgaaacatataattacactgaattatgtgattttc 11507515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 287 - 347
Target Start/End: Complemental strand, 3618943 - 3618883
Alignment:
Q  287 gtgtccgacaccaacacataattacactgaattatgtgattttctcatattattagcggtg 347  Q
    ||||| |||||| |||||||||||| ||||||||||  ||||||||| |||||||||||||    
T  3618943 gtgtctgacaccgacacataattacgctgaattatggaattttctcaaattattagcggtg 3618883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 292 - 347
Target Start/End: Original strand, 2620055 - 2620110
Alignment:
Q  292 cgacaccaacacataattacactgaattatgtgattttctcatattattagcggtg 347  Q
    ||||||||||||||| ||||||| |||||||||||||||||| || ||||| ||||    
T  2620055 cgacaccaacacatagttacacttaattatgtgattttctcaaatgattagtggtg 2620110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 304 - 347
Target Start/End: Original strand, 11493375 - 11493418
Alignment:
Q  304 ataattacactgaattatgtgattttctcatattattagcggtg 347  Q
    |||||||||||||||||||||||||||||| |||||||| ||||    
T  11493375 ataattacactgaattatgtgattttctcacattattagtggtg 11493418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 347
Target Start/End: Complemental strand, 25064962 - 25064911
Alignment:
Q  296 accaacacataattacactgaattatgtgattttctcatattattagcggtg 347  Q
    ||||||||||||||||||| |||||||||||||| ||| || ||||||||||    
T  25064962 accaacacataattacactaaattatgtgattttttcaaatcattagcggtg 25064911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 300 - 343
Target Start/End: Original strand, 27277848 - 27277891
Alignment:
Q  300 acacataattacactgaattatgtgattttctcatattattagc 343  Q
    ||||||||||||||| |||||||||||||||||| |||||||||    
T  27277848 acacataattacactaaattatgtgattttctcaaattattagc 27277891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 304 - 347
Target Start/End: Original strand, 34307794 - 34307837
Alignment:
Q  304 ataattacactgaattatgtgattttctcatattattagcggtg 347  Q
    |||||||||||||| ||||||||||||||| |||||||||||||    
T  34307794 ataattacactgaaatatgtgattttctcaaattattagcggtg 34307837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 292 - 343
Target Start/End: Original strand, 25948887 - 25948940
Alignment:
Q  292 cgacaccaacac--ataattacactgaattatgtgattttctcatattattagc 343  Q
    ||||||||||||  |||||||||||||||||||||||||| ||| |||||||||    
T  25948887 cgacaccaacacttataattacactgaattatgtgattttttcaaattattagc 25948940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 294 - 347
Target Start/End: Original strand, 5441035 - 5441088
Alignment:
Q  294 acaccaacacataattacactgaattatgtgattttctcatattattagcggtg 347  Q
    ||||| |||||||||| || |||||||||||||||||||| ||| |||||||||    
T  5441035 acaccgacacataattccattgaattatgtgattttctcaaatttttagcggtg 5441088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 342
Target Start/End: Original strand, 8412941 - 8412997
Alignment:
Q  286 cgtgtccgacaccaacacataattacactgaattatgtgattttctcatattattag 342  Q
    |||| |||||||  ||||||||||| ||||||||||||| |||||||| ||||||||    
T  8412941 cgtggccgacacggacacataattaaactgaattatgtgtttttctcaaattattag 8412997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 339
Target Start/End: Original strand, 8789544 - 8789599
Alignment:
Q  286 cgtgtccgacaccaacacata--attacactgaattatgtgattttctcatattat 339  Q
    ||||||||||||| |||||||  ||||||| ||||||||||||||||||| |||||    
T  8789544 cgtgtccgacaccgacacatataattacacggaattatgtgattttctcaaattat 8789599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 291 - 347
Target Start/End: Complemental strand, 15544751 - 15544695
Alignment:
Q  291 ccgacaccaacacataattacactgaattatgtgattttctcatattattagcggtg 347  Q
    |||||||  ||||||||||| || ||||||||||||||| ||| |||||||||||||    
T  15544751 ccgacacacacacataattatacagaattatgtgattttatcaaattattagcggtg 15544695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 343
Target Start/End: Complemental strand, 45451618 - 45451559
Alignment:
Q  286 cgtgtccgacaccaacacata--attacactgaattatgtgattttctcatattattagc 343  Q
    ||||||||||||| |||||||  |||| |||||| ||||||||||||||| |||||||||    
T  45451618 cgtgtccgacaccgacacatattattatactgaagtatgtgattttctcaaattattagc 45451559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 304 - 347
Target Start/End: Original strand, 5407261 - 5407304
Alignment:
Q  304 ataattacactgaattatgtgattttctcatattattagcggtg 347  Q
    ||||||||| |||||||||||||||||||| ||| |||||||||    
T  5407261 ataattacaatgaattatgtgattttctcaaatttttagcggtg 5407304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 304 - 347
Target Start/End: Original strand, 8039849 - 8039892
Alignment:
Q  304 ataattacactgaattatgtgattttctcatattattagcggtg 347  Q
    |||||||||||||||||| | ||||||||| |||||||||||||    
T  8039849 ataattacactgaattatataattttctcaaattattagcggtg 8039892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 304 - 343
Target Start/End: Complemental strand, 9624686 - 9624647
Alignment:
Q  304 ataattacactgaattatgtgattttctcatattattagc 343  Q
    ||||||||| |||||||||||||||||||| |||||||||    
T  9624686 ataattacattgaattatgtgattttctcaaattattagc 9624647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 304 - 343
Target Start/End: Original strand, 11313814 - 11313853
Alignment:
Q  304 ataattacactgaattatgtgattttctcatattattagc 343  Q
    ||||||||||| |||||||||||||||||| |||||||||    
T  11313814 ataattacactaaattatgtgattttctcaaattattagc 11313853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 304 - 347
Target Start/End: Complemental strand, 12704052 - 12704009
Alignment:
Q  304 ataattacactgaattatgtgattttctcatattattagcggtg 347  Q
    ||||||||||||||||||||| |||||||| |||||||| ||||    
T  12704052 ataattacactgaattatgtgcttttctcaaattattagtggtg 12704009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 304 - 347
Target Start/End: Original strand, 16192764 - 16192807
Alignment:
Q  304 ataattacactgaattatgtgattttctcatattattagcggtg 347  Q
    |||||||||||||||||||| ||||||||| ||||||| |||||    
T  16192764 ataattacactgaattatgttattttctcaaattattaacggtg 16192807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 304 - 347
Target Start/End: Original strand, 32804554 - 32804597
Alignment:
Q  304 ataattacactgaattatgtgattttctcatattattagcggtg 347  Q
    ||||||||||| |||||||||||||||||| ||||||| |||||    
T  32804554 ataattacactaaattatgtgattttctcaaattattaacggtg 32804597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 305 - 343
Target Start/End: Original strand, 4987306 - 4987344
Alignment:
Q  305 taattacactgaattatgtgattttctcatattattagc 343  Q
    ||||||||||||||||||||||||| ||| |||||||||    
T  4987306 taattacactgaattatgtgattttttcaaattattagc 4987344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 305 - 347
Target Start/End: Original strand, 4990982 - 4991024
Alignment:
Q  305 taattacactgaattatgtgattttctcatattattagcggtg 347  Q
    ||||||||||||||||||| ||||||||| | |||||||||||    
T  4990982 taattacactgaattatgtaattttctcaaactattagcggtg 4991024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 292 - 343
Target Start/End: Complemental strand, 10455849 - 10455796
Alignment:
Q  292 cgacaccaacacata--attacactgaattatgtgattttctcatattattagc 343  Q
    |||||||||||||||  |||||||| | |||| |||||||||||||||||||||    
T  10455849 cgacaccaacacatataattacacttagttatatgattttctcatattattagc 10455796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 305 - 343
Target Start/End: Complemental strand, 26508154 - 26508116
Alignment:
Q  305 taattacactgaattatgtgattttctcatattattagc 343  Q
    ||||||||||||||||||||||||| ||| |||||||||    
T  26508154 taattacactgaattatgtgattttttcaaattattagc 26508116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 305 - 343
Target Start/End: Complemental strand, 28918045 - 28918007
Alignment:
Q  305 taattacactgaattatgtgattttctcatattattagc 343  Q
    ||||||||||||||||||||||||| ||| |||||||||    
T  28918045 taattacactgaattatgtgattttttcaaattattagc 28918007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 329
Target Start/End: Original strand, 40993329 - 40993374
Alignment:
Q  286 cgtgtccgacaccaacacata--attacactgaattatgtgatttt 329  Q
    ||||||||||||| |||||||  |||||||||||||||||||||||    
T  40993329 cgtgtccgacaccgacacatataattacactgaattatgtgatttt 40993374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 333
Target Start/End: Original strand, 6780414 - 6780462
Alignment:
Q  287 gtgtccgacaccaacacata--attacactgaattatgtgattttctca 333  Q
    ||||||||||||||||||||  ||||||||||| || ||||||||||||    
T  6780414 gtgtccgacaccaacacatataattacactgaactacgtgattttctca 6780462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 304 - 341
Target Start/End: Original strand, 14840305 - 14840342
Alignment:
Q  304 ataattacactgaattatgtgattttctcatattatta 341  Q
    |||||||||||||||||||||||||||| | |||||||    
T  14840305 ataattacactgaattatgtgattttctgaaattatta 14840342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 306 - 343
Target Start/End: Complemental strand, 14979224 - 14979187
Alignment:
Q  306 aattacactgaattatgtgattttctcatattattagc 343  Q
    |||||||||||||||||||||||| ||| |||||||||    
T  14979224 aattacactgaattatgtgattttttcaaattattagc 14979187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 304 - 345
Target Start/End: Original strand, 15812835 - 15812876
Alignment:
Q  304 ataattacactgaattatgtgattttctcatattattagcgg 345  Q
    ||||||||||||| |||||||||||||||| |||||| ||||    
T  15812835 ataattacactgagttatgtgattttctcaaattatttgcgg 15812876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 341
Target Start/End: Complemental strand, 20691383 - 20691327
Alignment:
Q  287 gtgtccgacaccaacacata--attacactgaattatgtgattttctcatattatta 341  Q
    ||||| |||||| |||||||  ||||||||||||||||| ||||||||| |||||||    
T  20691383 gtgtctgacaccgacacatatgattacactgaattatgtcattttctcaaattatta 20691327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 333
Target Start/End: Complemental strand, 25093566 - 25093518
Alignment:
Q  287 gtgtccgacaccaacacata--attacactgaattatgtgattttctca 333  Q
    |||||||||||| |||||||  ||||||||||||| |||||||||||||    
T  25093566 gtgtccgacaccgacacatataattacactgaattgtgtgattttctca 25093518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 342
Target Start/End: Complemental strand, 34910361 - 34910324
Alignment:
Q  305 taattacactgaattatgtgattttctcatattattag 342  Q
    ||||||||||||||||||||||||| ||| ||||||||    
T  34910361 taattacactgaattatgtgattttttcaaattattag 34910324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 304 - 344
Target Start/End: Complemental strand, 1438849 - 1438809
Alignment:
Q  304 ataattacactgaattatgtgattttctcatattattagcg 344  Q
    ||||||| |||||||||||||||||||||| ||| ||||||    
T  1438849 ataattatactgaattatgtgattttctcaaattgttagcg 1438809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 303 - 347
Target Start/End: Complemental strand, 24633812 - 24633768
Alignment:
Q  303 cataattacactgaattatgtgattttctcatattattagcggtg 347  Q
    ||||||| ||| ||||||||||||||||||| |||||||| ||||    
T  24633812 cataattgcaccgaattatgtgattttctcaaattattagtggtg 24633768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 304 - 344
Target Start/End: Original strand, 32429394 - 32429434
Alignment:
Q  304 ataattacactgaattatgtgattttctcatattattagcg 344  Q
    |||||| ||||||||||||||||||||| | ||||||||||    
T  32429394 ataattgcactgaattatgtgattttcttaaattattagcg 32429434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 53; Significance: 2e-21; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 265 - 346
Target Start/End: Original strand, 34691778 - 34691861
Alignment:
Q  265 acggacactcctcagattaggcgtgtccgacaccaacac--ataattacactgaattatgtgattttctcatattattagcggt 346  Q
    ||||||||||||| |||||||||||||||||||| ||||  |||||||||||||||||| ||||||| ||| ||||||||||||    
T  34691778 acggacactcctcggattaggcgtgtccgacaccgacacatataattacactgaattatatgattttatcaaattattagcggt 34691861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 265 - 346
Target Start/End: Original strand, 34714190 - 34714273
Alignment:
Q  265 acggacactcctcagattaggcgtgtccgacaccaacac--ataattacactgaattatgtgattttctcatattattagcggt 346  Q
    ||||||||||||| |||||||||||||||||||| ||||  |||||||||||||||||| ||||||| ||| ||||||||||||    
T  34714190 acggacactcctcggattaggcgtgtccgacaccgacacatataattacactgaattatatgattttatcaaattattagcggt 34714273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 267 - 329
Target Start/End: Original strand, 19536372 - 19536436
Alignment:
Q  267 ggacactcctcagattaggcgtgtccgacaccaacac--ataattacactgaattatgtgatttt 329  Q
    ||||||||||| |||||||||||||||||||| ||||   |||||||||||||||||||||||||    
T  19536372 ggacactcctcggattaggcgtgtccgacaccgacacttgtaattacactgaattatgtgatttt 19536436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 300 - 347
Target Start/End: Complemental strand, 18276570 - 18276523
Alignment:
Q  300 acacataattacactgaattatgtgattttctcatattattagcggtg 347  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||||    
T  18276570 acacataattacactgaattaagtgattttctcaaattattagcggtg 18276523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 304 - 347
Target Start/End: Complemental strand, 21616807 - 21616764
Alignment:
Q  304 ataattacactgaattatgtgattttctcatattattagcggtg 347  Q
    |||||||||||||||||||||||||||||| |||||||||||||    
T  21616807 ataattacactgaattatgtgattttctcaaattattagcggtg 21616764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 292 - 343
Target Start/End: Original strand, 21782820 - 21782871
Alignment:
Q  292 cgacaccaacacataattacactgaattatgtgattttctcatattattagc 343  Q
    |||||||  ||||||||||||||||||||||||||||||||| |||||||||    
T  21782820 cgacaccggcacataattacactgaattatgtgattttctcaaattattagc 21782871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 292 - 341
Target Start/End: Complemental strand, 2331851 - 2331802
Alignment:
Q  292 cgacaccaacacataattacactgaattatgtgattttctcatattatta 341  Q
    ||||||| |||||||| ||||||||||||||||||||||||| |||||||    
T  2331851 cgacaccgacacataaatacactgaattatgtgattttctcaaattatta 2331802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 291 - 347
Target Start/End: Complemental strand, 28677968 - 28677911
Alignment:
Q  291 ccgacacc-aacacataattacactgaattatgtgattttctcatattattagcggtg 347  Q
    |||||||| |||| |||||||||||||||||||||||||| ||| |||||||||||||    
T  28677968 ccgacaccgaacatataattacactgaattatgtgattttttcaaattattagcggtg 28677911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 295 - 347
Target Start/End: Complemental strand, 28412404 - 28412352
Alignment:
Q  295 caccaacacataattacactgaattatgtgattttctcatattattagcggtg 347  Q
    |||| |||||||||||||||||||||||||||||| ||| ||||||| |||||    
T  28412404 caccgacacataattacactgaattatgtgattttatcaaattattaacggtg 28412352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 286 - 342
Target Start/End: Complemental strand, 5367257 - 5367199
Alignment:
Q  286 cgtgtccgacaccaacacata--attacactgaattatgtgattttctcatattattag 342  Q
    ||||||||||||| |||||||  |||||||||||||||||||||| |||| ||||||||    
T  5367257 cgtgtccgacaccgacacatataattacactgaattatgtgatttcctcaaattattag 5367199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 304 - 347
Target Start/End: Complemental strand, 23718071 - 23718028
Alignment:
Q  304 ataattacactgaattatgtgattttctcatattattagcggtg 347  Q
    |||||||||||||||||||||| ||||||| |||||||||||||    
T  23718071 ataattacactgaattatgtgactttctcaaattattagcggtg 23718028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 304 - 347
Target Start/End: Complemental strand, 24105743 - 24105700
Alignment:
Q  304 ataattacactgaattatgtgattttctcatattattagcggtg 347  Q
    |||||||||||||||||||||| ||||||| |||||||||||||    
T  24105743 ataattacactgaattatgtgactttctcaaattattagcggtg 24105700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 304 - 347
Target Start/End: Original strand, 37411258 - 37411301
Alignment:
Q  304 ataattacactgaattatgtgattttctcatattattagcggtg 347  Q
    ||||| |||||||||||||||||||||||| |||||||||||||    
T  37411258 ataatcacactgaattatgtgattttctcaaattattagcggtg 37411301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 304 - 347
Target Start/End: Complemental strand, 39279720 - 39279677
Alignment:
Q  304 ataattacactgaattatgtgattttctcatattattagcggtg 347  Q
    |||||||||||||||||| ||||||||||||||||||| |||||    
T  39279720 ataattacactgaattatttgattttctcatattattaacggtg 39279677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 304 - 347
Target Start/End: Complemental strand, 44860365 - 44860322
Alignment:
Q  304 ataattacactgaattatgtgattttctcatattattagcggtg 347  Q
    ||||||||||||||||||| |||||||||| |||||||||||||    
T  44860365 ataattacactgaattatgcgattttctcaaattattagcggtg 44860322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 293 - 347
Target Start/End: Complemental strand, 1328034 - 1327980
Alignment:
Q  293 gacaccaacacataattacactgaattatgtgattttctcatattattagcggtg 347  Q
    |||||| ||||||||||| |||||||| | ||||||||||| |||||||||||||    
T  1328034 gacaccgacacataattatactgaattttatgattttctcaaattattagcggtg 1327980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 293 - 347
Target Start/End: Original strand, 36409630 - 36409684
Alignment:
Q  293 gacaccaacacataattacactgaattatgtgattttctcatattattagcggtg 347  Q
    |||||| ||||||||||||||| |||||||||||||| ||| ||||| |||||||    
T  36409630 gacaccgacacataattacactaaattatgtgattttttcaaattatcagcggtg 36409684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 347
Target Start/End: Original strand, 30298444 - 30298504
Alignment:
Q  287 gtgtccgacaccaacacataattacactgaattatgtgattttctcatattattagcggtg 347  Q
    |||||||||||| |||||| ||||||||||||||||| ||||| | | ||||||| |||||    
T  30298444 gtgtccgacaccgacacatgattacactgaattatgtcattttattaaattattatcggtg 30298504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 347
Target Start/End: Complemental strand, 31018655 - 31018592
Alignment:
Q  286 cgtgtccgacaccaacac--ataattacactgaattatgtgattttctcatattattagcggtg 347  Q
    ||||||||||||| ||||  ||||||||||| ||| |||||||||||| | |||||||||||||    
T  31018655 cgtgtccgacaccgacacctataattacactaaatcatgtgattttctgaaattattagcggtg 31018592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 294 - 341
Target Start/End: Complemental strand, 4332981 - 4332934
Alignment:
Q  294 acaccaacacataattacactgaattatgtgattttctcatattatta 341  Q
    ||||| ||||||||||||| ||||||||||||||||| || |||||||    
T  4332981 acaccgacacataattacattgaattatgtgattttcccaaattatta 4332934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 265 - 329
Target Start/End: Original strand, 18255953 - 18256019
Alignment:
Q  265 acggacactcctcagattaggcgtgtccgacaccaacac--ataattacactgaattatgtgatttt 329  Q
    ||||||||||||  |||||||||||||||||||| ||||   |||||||| | ||||||||||||||    
T  18255953 acggacactccttggattaggcgtgtccgacaccgacacttctaattacattaaattatgtgatttt 18256019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 293 - 345
Target Start/End: Original strand, 18889592 - 18889646
Alignment:
Q  293 gacaccaacacata--attacactgaattatgtgattttctcatattattagcgg 345  Q
    |||||| |||||||  |||||||||||||||||||||||||||  ||||||||||    
T  18889592 gacaccgacacatatgattacactgaattatgtgattttctcaatttattagcgg 18889646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 287 - 331
Target Start/End: Original strand, 20242722 - 20242768
Alignment:
Q  287 gtgtccgacaccaacacata--attacactgaattatgtgattttct 331  Q
    |||||||||||| |||||||  |||||||||||||||||||||||||    
T  20242722 gtgtccgacaccgacacatataattacactgaattatgtgattttct 20242768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 304 - 347
Target Start/End: Complemental strand, 25846786 - 25846743
Alignment:
Q  304 ataattacactgaattatgtgattttctcatattattagcggtg 347  Q
    ||||||||||||||| |||||||||||||| |||||||| ||||    
T  25846786 ataattacactgaatcatgtgattttctcaaattattagtggtg 25846743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 304 - 347
Target Start/End: Complemental strand, 31808122 - 31808079
Alignment:
Q  304 ataattacactgaattatgtgattttctcatattattagcggtg 347  Q
    |||||||||||||||||||||||||| | | |||||||||||||    
T  31808122 ataattacactgaattatgtgattttgttaaattattagcggtg 31808079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 304 - 347
Target Start/End: Original strand, 42832290 - 42832333
Alignment:
Q  304 ataattacactgaattatgtgattttctcatattattagcggtg 347  Q
    |||||||||||||| ||||| ||||||||| |||||||||||||    
T  42832290 ataattacactgaaatatgtaattttctcaaattattagcggtg 42832333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 341
Target Start/End: Complemental strand, 5473393 - 5473336
Alignment:
Q  286 cgtgtccgacaccaacacataat--tacactgaattatgtgattttctcatattatta 341  Q
    ||||||||||||| |||||||||  ||||| ||||||||||||||| ||| |||||||    
T  5473393 cgtgtccgacaccgacacataatattacaccgaattatgtgattttttcaaattatta 5473336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 304 - 346
Target Start/End: Complemental strand, 23921298 - 23921256
Alignment:
Q  304 ataattacactgaattatgtgattttctcatattattagcggt 346  Q
    |||||||||||||||||||| ||||||||| ||||||| ||||    
T  23921298 ataattacactgaattatgtaattttctcaaattattaacggt 23921256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 305 - 343
Target Start/End: Original strand, 30717545 - 30717583
Alignment:
Q  305 taattacactgaattatgtgattttctcatattattagc 343  Q
    ||||||||||||||||||||||||| ||| |||||||||    
T  30717545 taattacactgaattatgtgattttttcaaattattagc 30717583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 305 - 347
Target Start/End: Complemental strand, 39323308 - 39323266
Alignment:
Q  305 taattacactgaattatgtgattttctcatattattagcggtg 347  Q
    ||||||||||||||||||| ||||| ||| |||||||||||||    
T  39323308 taattacactgaattatgtaattttgtcaaattattagcggtg 39323266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 347
Target Start/End: Original strand, 2665892 - 2665945
Alignment:
Q  294 acaccaacacataattacactgaattatgtgattttctcatattattagcggtg 347  Q
    ||||| ||| ||||||||||| |||||||||||||||| | |||||||| ||||    
T  2665892 acacccacatataattacactaaattatgtgattttctaaaattattagtggtg 2665945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 292 - 342
Target Start/End: Complemental strand, 18622665 - 18622613
Alignment:
Q  292 cgacaccaacac--ataattacactgaattatgtgattttctcatattattag 342  Q
    ||||||||||||  |||||||||||||||||||||||||| | | ||||||||    
T  18622665 cgacaccaacacgtataattacactgaattatgtgattttattaaattattag 18622613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 306 - 347
Target Start/End: Original strand, 22084848 - 22084889
Alignment:
Q  306 aattacactgaattatgtgattttctcatattattagcggtg 347  Q
    |||||||||||||||| ||||||||||| ||||||| |||||    
T  22084848 aattacactgaattatatgattttctcaaattattaacggtg 22084889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 304 - 341
Target Start/End: Complemental strand, 35449558 - 35449521
Alignment:
Q  304 ataattacactgaattatgtgattttctcatattatta 341  Q
    |||||||||||||||| ||||||||||||| |||||||    
T  35449558 ataattacactgaattctgtgattttctcaaattatta 35449521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 341
Target Start/End: Complemental strand, 43996964 - 43996895
Alignment:
Q  272 ctcctcagattaggcgtgtccgacaccaacacataattacactgaattatgtgattttctcatattatta 341  Q
    |||||| |||||||||||||||||||| ||| || |||||  |||||||||| ||| ||||  |||||||    
T  43996964 ctcctcggattaggcgtgtccgacaccgacatatgattacgttgaattatgtcattctctctaattatta 43996895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 343
Target Start/End: Original strand, 2438713 - 2438772
Alignment:
Q  286 cgtgtccgacaccaacacat--aattacactgaattatgtgattttctcatattattagc 343  Q
    ||||||||||||| |||| |  |||||||||||||||||||||||| | | |||||||||    
T  2438713 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttgaaattattagc 2438772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 307 - 347
Target Start/End: Original strand, 10535776 - 10535816
Alignment:
Q  307 attacactgaattatgtgattttctcatattattagcggtg 347  Q
    ||||||||||||||||| ||||||||| ||||||| |||||    
T  10535776 attacactgaattatgtcattttctcaaattattatcggtg 10535816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 307 - 347
Target Start/End: Original strand, 29970566 - 29970606
Alignment:
Q  307 attacactgaattatgtgattttctcatattattagcggtg 347  Q
    ||||||||||| |||| |||||||||| |||||||||||||    
T  29970566 attacactgaactatgcgattttctcaaattattagcggtg 29970606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 305 - 341
Target Start/End: Original strand, 30404865 - 30404901
Alignment:
Q  305 taattacactgaattatgtgattttctcatattatta 341  Q
    ||||||||||||||||||||||||| ||| |||||||    
T  30404865 taattacactgaattatgtgattttttcaaattatta 30404901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 50; Significance: 1e-19; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 286 - 347
Target Start/End: Original strand, 37283806 - 37283867
Alignment:
Q  286 cgtgtccgacaccaacacataattacactgaattatgtgattttctcatattattagcggtg 347  Q
    ||||||| ||||| |||||||||||||||||||||||||||||||||| |||||||||||||    
T  37283806 cgtgtcccacaccgacacataattacactgaattatgtgattttctcagattattagcggtg 37283867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 265 - 347
Target Start/End: Complemental strand, 34897171 - 34897087
Alignment:
Q  265 acggacactcctcagattaggcgtgtccgacaccaacacata--attacactgaattatgtgattttctcatattattagcggtg 347  Q
    |||||||||||||  ||||   |||||||||| | |||||||  ||||||||||||||||||||||||||| |||||||||||||    
T  34897171 acggacactcctcgaattacatgtgtccgacatcgacacatataattacactgaattatgtgattttctcaaattattagcggtg 34897087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 286 - 343
Target Start/End: Complemental strand, 3025616 - 3025557
Alignment:
Q  286 cgtgtccgacaccaacac--ataattacactgaattatgtgattttctcatattattagc 343  Q
    ||||||||||||  ||||  |||||||||||||||||||||||||||||| |||||||||    
T  3025616 cgtgtccgacactgacacctataattacactgaattatgtgattttctcaaattattagc 3025557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 304 - 347
Target Start/End: Complemental strand, 4611579 - 4611536
Alignment:
Q  304 ataattacactgaattatgtgattttctcatattattagcggtg 347  Q
    |||||||||||||||||||| ||||||||| |||||||||||||    
T  4611579 ataattacactgaattatgttattttctcaaattattagcggtg 4611536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 287 - 343
Target Start/End: Original strand, 13844591 - 13844649
Alignment:
Q  287 gtgtccgacaccaacacata--attacactgaattatgtgattttctcatattattagc 343  Q
    |||||||||||| |||||||  |||||||| |||||||||||||||||| |||||||||    
T  13844591 gtgtccgacaccgacacatataattacactcaattatgtgattttctcaaattattagc 13844649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 304 - 347
Target Start/End: Original strand, 24362216 - 24362259
Alignment:
Q  304 ataattacactgaattatgtgattttctcatattattagcggtg 347  Q
    |||||||||||||||||||||||| ||||| |||||||||||||    
T  24362216 ataattacactgaattatgtgattctctcaaattattagcggtg 24362259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 304 - 347
Target Start/End: Original strand, 39954293 - 39954336
Alignment:
Q  304 ataattacactgaattatgtgattttctcatattattagcggtg 347  Q
    ||||||||||| |||||||||||||||||| |||||||||||||    
T  39954293 ataattacactaaattatgtgattttctcaaattattagcggtg 39954336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 304 - 342
Target Start/End: Complemental strand, 14134744 - 14134706
Alignment:
Q  304 ataattacactgaattatgtgattttctcatattattag 342  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  14134744 ataattacactgaattatgtgattttctcaaattattag 14134706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 310 - 347
Target Start/End: Original strand, 18067954 - 18067991
Alignment:
Q  310 acactgaattatgtgattttctcatattattagcggtg 347  Q
    |||||||||||||||||||||||| |||||||||||||    
T  18067954 acactgaattatgtgattttctcaaattattagcggtg 18067991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 343
Target Start/End: Original strand, 12606800 - 12606882
Alignment:
Q  265 acggacactcctcagattaggcg--tgtccgacaccaacacata--attacactgaattatgtgattttctcatattattagc 343  Q
    ||||||||||||| ||| |||||  |||| |||||| |||||||  |||||| |||||||| ||||||||||| |||||||||    
T  12606800 acggacactcctcggatcaggcgcttgtctgacaccgacacatataattacattgaattatatgattttctcaaattattagc 12606882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 343
Target Start/End: Original strand, 31236571 - 31236630
Alignment:
Q  286 cgtgtccgacaccaacacata--attacactgaattatgtgattttctcatattattagc 343  Q
    |||||||| |||| |||||||  |||||| |||||||||||||||||||| |||||||||    
T  31236571 cgtgtccgtcaccgacacatataattacattgaattatgtgattttctcaaattattagc 31236630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 286 - 342
Target Start/End: Complemental strand, 4948717 - 4948659
Alignment:
Q  286 cgtgtccgacaccaacacat--aattacactgaattatgtgattttctcatattattag 342  Q
    ||||||||||||| |||| |  |||||||||||||||||||||||| ||| ||||||||    
T  4948717 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattag 4948659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 304 - 347
Target Start/End: Complemental strand, 7658508 - 7658465
Alignment:
Q  304 ataattacactgaattatgtgattttctcatattattagcggtg 347  Q
    |||||||||||||||||||| ||||||||| |||||||| ||||    
T  7658508 ataattacactgaattatgtaattttctcaaattattagtggtg 7658465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 304 - 343
Target Start/End: Complemental strand, 14731757 - 14731718
Alignment:
Q  304 ataattacactgaattatgtgattttctcatattattagc 343  Q
    ||||||||||| |||||||||||||||||| |||||||||    
T  14731757 ataattacactaaattatgtgattttctcaaattattagc 14731718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 304 - 347
Target Start/End: Original strand, 20679409 - 20679452
Alignment:
Q  304 ataattacactgaattatgtgattttctcatattattagcggtg 347  Q
    |||||||||||||| ||||||||||||||| |||||||| ||||    
T  20679409 ataattacactgaactatgtgattttctcaaattattaggggtg 20679452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 305 - 340
Target Start/End: Complemental strand, 40332235 - 40332200
Alignment:
Q  305 taattacactgaattatgtgattttctcatattatt 340  Q
    ||||||||||||||||||||||||||||| ||||||    
T  40332235 taattacactgaattatgtgattttctcaaattatt 40332200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 290 - 341
Target Start/End: Original strand, 4786336 - 4786389
Alignment:
Q  290 tccgacaccaacacata--attacactgaattatgtgattttctcatattatta 341  Q
    ||||||||| |||||||  ||||||||||||||||||||||||| | |||||||    
T  4786336 tccgacaccgacacatataattacactgaattatgtgattttcttaaattatta 4786389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 294 - 341
Target Start/End: Complemental strand, 11803316 - 11803267
Alignment:
Q  294 acaccaacacata--attacactgaattatgtgattttctcatattatta 341  Q
    |||||||||||||  ||||||||||||||||||||||||| | |||||||    
T  11803316 acaccaacacatataattacactgaattatgtgattttcttaaattatta 11803267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 304 - 342
Target Start/End: Complemental strand, 13203686 - 13203648
Alignment:
Q  304 ataattacactgaattatgtgattttctcatattattag 342  Q
    |||||||||||||||||||| ||||||||| ||||||||    
T  13203686 ataattacactgaattatgtaattttctcaaattattag 13203648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 305 - 343
Target Start/End: Complemental strand, 25566885 - 25566847
Alignment:
Q  305 taattacactgaattatgtgattttctcatattattagc 343  Q
    ||||||||||||||||||||||||| ||| |||||||||    
T  25566885 taattacactgaattatgtgattttttcaaattattagc 25566847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 347
Target Start/End: Original strand, 26714080 - 26714141
Alignment:
Q  286 cgtgtccgacaccaacacataattacactgaattatgtga-ttttctcatattattagcggtg 347  Q
    ||||||||||||| |||||||||||||| | | ||||||| |||||||| |||||||||||||    
T  26714080 cgtgtccgacaccgacacataattacaccg-agtatgtgatttttctcacattattagcggtg 26714141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 341
Target Start/End: Original strand, 33405378 - 33405435
Alignment:
Q  286 cgtgtccgacaccaacacata--attacactgaattatgtgattttctcatattatta 341  Q
    ||||||||||||| |||||||  |||||||| ||||||||| |||||||| |||||||    
T  33405378 cgtgtccgacaccgacacatataattacactaaattatgtgtttttctcaaattatta 33405435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 304 - 341
Target Start/End: Original strand, 11927100 - 11927137
Alignment:
Q  304 ataattacactgaattatgtgattttctcatattatta 341  Q
    |||||||||||||||||||||||||| ||| |||||||    
T  11927100 ataattacactgaattatgtgattttatcaaattatta 11927137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 341
Target Start/End: Complemental strand, 12985456 - 12985400
Alignment:
Q  287 gtgtccgacaccaacacata--attacactgaattatgtgattttctcatattatta 341  Q
    |||||||||||| ||| |||  |||||| |||||||||||||||||||| |||||||    
T  12985456 gtgtccgacaccgacatatatgattacattgaattatgtgattttctcaaattatta 12985400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 343
Target Start/End: Complemental strand, 29776091 - 29776042
Alignment:
Q  294 acaccaacacataattacactgaattatgtgattttctcatattattagc 343  Q
    ||||| ||| ||||||| ||||||||| |||||||||||| |||||||||    
T  29776091 acaccgacatataattatactgaattacgtgattttctcaaattattagc 29776042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 30011751 - 30011784
Alignment:
Q  1 caatcatatgtgtgactttagaagtagttatgat 34  Q
    ||||||||||||||| ||||||||||||||||||    
T  30011751 caatcatatgtgtgattttagaagtagttatgat 30011784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 31
Target Start/End: Complemental strand, 2309205 - 2309177
Alignment:
Q  3 atcatatgtgtgactttagaagtagttat 31  Q
    |||||||||||||||||||||||||||||    
T  2309205 atcatatgtgtgactttagaagtagttat 2309177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 50; Significance: 1e-19; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 294 - 347
Target Start/End: Original strand, 29787373 - 29787426
Alignment:
Q  294 acaccaacacataattacactgaattatgtgattttctcatattattagcggtg 347  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  29787373 acaccaacacataattacactgaattatgtgattttctcaaattattagcggtg 29787426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 272 - 343
Target Start/End: Complemental strand, 3721172 - 3721099
Alignment:
Q  272 ctcctcagattaggcgtgtccgacaccaacacata--attacactgaattatgtgattttctcatattattagc 343  Q
    |||||| |||||||||||||||||||| |||||||  |||| ||| |||||||||||||||||| |||||||||    
T  3721172 ctcctcggattaggcgtgtccgacaccgacacatataattatactaaattatgtgattttctcaaattattagc 3721099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 287 - 347
Target Start/End: Complemental strand, 20549855 - 20549793
Alignment:
Q  287 gtgtccgacaccaacacata--attacactgaattatgtgattttctcatattattagcggtg 347  Q
    |||||||||||| |||||||  |||||||||||||| |||||||||||| |||||||||||||    
T  20549855 gtgtccgacaccgacacatataattacactgaattacgtgattttctcaaattattagcggtg 20549793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 304 - 347
Target Start/End: Complemental strand, 22868087 - 22868044
Alignment:
Q  304 ataattacactgaattatgtgattttctcatattattagcggtg 347  Q
    ||||||||||||||||||||||||||||||||||||||| ||||    
T  22868087 ataattacactgaattatgtgattttctcatattattagtggtg 22868044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 292 - 347
Target Start/End: Complemental strand, 30731094 - 30731039
Alignment:
Q  292 cgacaccaacacataattacactgaattatgtgattttctcatattattagcggtg 347  Q
    ||||||| ||||| |||||||||||||||||||||||||||| |||||| ||||||    
T  30731094 cgacaccgacacacaattacactgaattatgtgattttctcaaattattcgcggtg 30731039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 302 - 344
Target Start/End: Complemental strand, 2424661 - 2424619
Alignment:
Q  302 acataattacactgaattatgtgattttctcatattattagcg 344  Q
    |||||||||||||||||||||||||||||||| ||||||||||    
T  2424661 acataattacactgaattatgtgattttctcaaattattagcg 2424619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 306 - 347
Target Start/End: Complemental strand, 32308163 - 32308122
Alignment:
Q  306 aattacactgaattatgtgattttctcatattattagcggtg 347  Q
    |||||||||||||||||||||||||||| |||||||||||||    
T  32308163 aattacactgaattatgtgattttctcaaattattagcggtg 32308122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 302 - 346
Target Start/End: Complemental strand, 14729748 - 14729704
Alignment:
Q  302 acataattacactgaattatgtgattttctcatattattagcggt 346  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||    
T  14729748 acataattacactgaattacgtgattttctcaaattattagcggt 14729704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 286 - 343
Target Start/End: Complemental strand, 25481967 - 25481908
Alignment:
Q  286 cgtgtccgacaccaacacat--aattacactgaattatgtgattttctcatattattagc 343  Q
    |||||||||||||||||| |  |||||||||||||||||||||||| ||| |||||||||    
T  25481967 cgtgtccgacaccaacacttgtaattacactgaattatgtgattttttcaaattattagc 25481908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 286 - 347
Target Start/End: Complemental strand, 26733369 - 26733306
Alignment:
Q  286 cgtgtccgacaccaacacat--aattacactgaattatgtgattttctcatattattagcggtg 347  Q
    ||||||||||||| ||||||  ||||| |||||||||||||||||| ||| |||||||||||||    
T  26733369 cgtgtccgacaccgacacatttaattagactgaattatgtgattttgtcaaattattagcggtg 26733306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 300 - 343
Target Start/End: Complemental strand, 12289163 - 12289120
Alignment:
Q  300 acacataattacactgaattatgtgattttctcatattattagc 343  Q
    |||||||||| ||||||||||||||||||||||| |||||||||    
T  12289163 acacataattccactgaattatgtgattttctcaaattattagc 12289120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 269 - 341
Target Start/End: Complemental strand, 38143305 - 38143231
Alignment:
Q  269 acactcctcagattaggcgtgtccgacaccaacac--ataattacactgaattatgtgattttctcatattatta 341  Q
    ||||||||| ||||||| ||||| |||||||||||  ||||||||| | |||||||||||||| ||| |||||||    
T  38143305 acactcctcggattaggtgtgtctgacaccaacacatataattacattaaattatgtgattttttcaaattatta 38143231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 304 - 346
Target Start/End: Complemental strand, 17851476 - 17851434
Alignment:
Q  304 ataattacactgaattatgtgattttctcatattattagcggt 346  Q
    |||||||||||||||||||||||||||| | ||||||||||||    
T  17851476 ataattacactgaattatgtgattttctaaaattattagcggt 17851434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 305 - 347
Target Start/End: Complemental strand, 23191940 - 23191898
Alignment:
Q  305 taattacactgaattatgtgattttctcatattattagcggtg 347  Q
    ||||||||||||| ||||||||||||||| |||||||||||||    
T  23191940 taattacactgaaatatgtgattttctcaaattattagcggtg 23191898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 288 - 347
Target Start/End: Original strand, 32287459 - 32287520
Alignment:
Q  288 tgtccgacaccaacacataa--ttacactgaattatgtgattttctcatattattagcggtg 347  Q
    ||||||||||| |||||||   || ||||||||||||||||||||||| |||||||||||||    
T  32287459 tgtccgacaccgacacatatacttgcactgaattatgtgattttctcagattattagcggtg 32287520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 288 - 341
Target Start/End: Original strand, 9756984 - 9757037
Alignment:
Q  288 tgtccgacaccaacacataattacactgaattatgtgattttctcatattatta 341  Q
    |||| ||||| |||||||||||| |||||||| ||||||||||||| |||||||    
T  9756984 tgtcggacactaacacataattaaactgaattgtgtgattttctcaaattatta 9757037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 344
Target Start/End: Complemental strand, 21880217 - 21880157
Alignment:
Q  286 cgtgtccgacaccaacacat--aattacactgaattatgtgattttctcatattattagcg 344  Q
    ||||||||||||| |||| |  |||||||||||||||||| ||||||||| ||||||||||    
T  21880217 cgtgtccgacaccgacacttgtaattacactgaattatgtaattttctcaaattattagcg 21880157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 36853107 - 36853140
Alignment:
Q  1 caatcatatgtgtgactttagaagtagttatgat 34  Q
    ||||||||||||||||||||||||||||||||||    
T  36853107 caatcatatgtgtgactttagaagtagttatgat 36853140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 304 - 344
Target Start/End: Complemental strand, 1401070 - 1401030
Alignment:
Q  304 ataattacactgaattatgtgattttctcatattattagcg 344  Q
    |||||||||||||||||||||| ||||||| ||||||||||    
T  1401070 ataattacactgaattatgtgagtttctcaaattattagcg 1401030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 304 - 347
Target Start/End: Complemental strand, 5548721 - 5548678
Alignment:
Q  304 ataattacactgaattatgtgattttctcatattattagcggtg 347  Q
    |||||||||||||||||| ||||||||||| ||||| |||||||    
T  5548721 ataattacactgaattatttgattttctcaaattatcagcggtg 5548678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 300 - 347
Target Start/End: Complemental strand, 11700852 - 11700805
Alignment:
Q  300 acacataattacactgaattatgtgattttctcatattattagcggtg 347  Q
    ||||||||||||| |||||||||||||||| ||| ||||||| |||||    
T  11700852 acacataattacattgaattatgtgattttgtcaaattattaacggtg 11700805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 304 - 347
Target Start/End: Complemental strand, 19206095 - 19206052
Alignment:
Q  304 ataattacactgaattatgtgattttctcatattattagcggtg 347  Q
    ||||||| | |||||||||||||||||||| |||||||||||||    
T  19206095 ataattataatgaattatgtgattttctcaaattattagcggtg 19206052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 304 - 343
Target Start/End: Complemental strand, 19992046 - 19992007
Alignment:
Q  304 ataattacactgaattatgtgattttctcatattattagc 343  Q
    |||||||||||||| ||||||||||||||| |||||||||    
T  19992046 ataattacactgaaatatgtgattttctcaaattattagc 19992007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 304 - 347
Target Start/End: Original strand, 27093427 - 27093470
Alignment:
Q  304 ataattacactgaattatgtgattttctcatattattagcggtg 347  Q
    ||||||||||| |||||||||||||||| | |||||||||||||    
T  27093427 ataattacactaaattatgtgattttcttaaattattagcggtg 27093470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 304 - 347
Target Start/End: Complemental strand, 27184874 - 27184831
Alignment:
Q  304 ataattacactgaattatgtgattttctcatattattagcggtg 347  Q
    ||||||||||| |||||||||||||||| | |||||||||||||    
T  27184874 ataattacactaaattatgtgattttcttaaattattagcggtg 27184831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 287 - 347
Target Start/End: Complemental strand, 28155634 - 28155572
Alignment:
Q  287 gtgtccgacaccaacacat--aattacactgaattatgtgattttctcatattattagcggtg 347  Q
    |||||||||||| |||| |  |||||||| ||||||||| ||||||||| |||||||||||||    
T  28155634 gtgtccgacaccgacacttgtaattacaccgaattatgtaattttctcaaattattagcggtg 28155572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 344
Target Start/End: Complemental strand, 9482996 - 9482939
Alignment:
Q  289 gtccgacaccaacacata--attacactgaattatgtgattttctcatattattagcg 344  Q
    |||||||||| |||||||  ||||||||||||| ||||||||||||| ||||| ||||    
T  9482996 gtccgacaccgacacatataattacactgaattgtgtgattttctcaaattatcagcg 9482939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 305 - 343
Target Start/End: Complemental strand, 24339686 - 24339648
Alignment:
Q  305 taattacactgaattatgtgattttctcatattattagc 343  Q
    ||||||||||||||||||||||||| ||| |||||||||    
T  24339686 taattacactgaattatgtgattttttcaaattattagc 24339648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 305 - 343
Target Start/End: Original strand, 26033476 - 26033514
Alignment:
Q  305 taattacactgaattatgtgattttctcatattattagc 343  Q
    ||||||||||||||||||||||||| ||| |||||||||    
T  26033476 taattacactgaattatgtgattttttcaaattattagc 26033514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 305 - 347
Target Start/End: Complemental strand, 27945085 - 27945043
Alignment:
Q  305 taattacactgaattatgtgattttctcatattattagcggtg 347  Q
    ||||||||||||||||||| ||||||||| |||||||| ||||    
T  27945085 taattacactgaattatgtaattttctcaaattattagtggtg 27945043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 305 - 343
Target Start/End: Complemental strand, 30813856 - 30813818
Alignment:
Q  305 taattacactgaattatgtgattttctcatattattagc 343  Q
    ||||||||||||||||||| ||||||||| |||||||||    
T  30813856 taattacactgaattatgtaattttctcaaattattagc 30813818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 304 - 341
Target Start/End: Complemental strand, 10377552 - 10377515
Alignment:
Q  304 ataattacactgaattatgtgattttctcatattatta 341  Q
    |||||||||||||||||| ||||||||| |||||||||    
T  10377552 ataattacactgaattatatgattttcttatattatta 10377515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 304 - 341
Target Start/End: Complemental strand, 16341541 - 16341504
Alignment:
Q  304 ataattacactgaattatgtgattttctcatattatta 341  Q
    ||||||||||| |||||||||||||||||| |||||||    
T  16341541 ataattacacttaattatgtgattttctcaaattatta 16341504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 292 - 338
Target Start/End: Complemental strand, 17307952 - 17307904
Alignment:
Q  292 cgacaccaacacata--attacactgaattatgtgattttctcatatta 338  Q
    |||||||||||||||  ||||||||||||||||| ||||||||| ||||    
T  17307952 cgacaccaacacatataattacactgaattatgttattttctcaaatta 17307904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 304 - 333
Target Start/End: Original strand, 22602724 - 22602753
Alignment:
Q  304 ataattacactgaattatgtgattttctca 333  Q
    ||||||||||||||||||||||||||||||    
T  22602724 ataattacactgaattatgtgattttctca 22602753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 347
Target Start/End: Original strand, 8090019 - 8090082
Alignment:
Q  286 cgtgtccgacaccaacacat--aattacactgaattatgtgattttctcatattattagcggtg 347  Q
    ||||||||||||||||||||  | ||||||||||||| ||||| |||||| |||| ||| ||||    
T  8090019 cgtgtccgacaccaacacatacagttacactgaattacgtgatattctcaaattactagtggtg 8090082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 331
Target Start/End: Original strand, 18213027 - 18213074
Alignment:
Q  286 cgtgtccgacaccaacacata--attacactgaattatgtgattttct 331  Q
    ||||||||||||| |||||||  |||||||| ||||||||||||||||    
T  18213027 cgtgtccgacaccgacacatataattacactaaattatgtgattttct 18213074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 341
Target Start/End: Original strand, 35297672 - 35297723
Alignment:
Q  292 cgacaccaacacata--attacactgaattatgtgattttctcatattatta 341  Q
    |||||||||||||||  |||| | |||||||||||||||||||| |||||||    
T  35297672 cgacaccaacacatataattataatgaattatgtgattttctcaaattatta 35297723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 331
Target Start/End: Complemental strand, 39138509 - 39138462
Alignment:
Q  286 cgtgtccgacaccaacacata--attacactgaattatgtgattttct 331  Q
    ||||||||||||| ||| |||  |||||||||||||||||||||||||    
T  39138509 cgtgtccgacaccgacatatataattacactgaattatgtgattttct 39138462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 50; Significance: 1e-19; HSPs: 49)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 286 - 347
Target Start/End: Original strand, 31579221 - 31579282
Alignment:
Q  286 cgtgtccgacaccaacacataattacactgaattatgtgattttctcatattattagcggtg 347  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||    
T  31579221 cgtgtccgacaccgacacataattacactgaattatgtgattttctcaaattattaacggtg 31579282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 267 - 347
Target Start/End: Original strand, 5732485 - 5732567
Alignment:
Q  267 ggacactcctcagattaggcgtgtccgacaccaacac--ataattacactgaattatgtgattttctcatattattagcggtg 347  Q
    ||||||||||| |||||||||||||||||||| ||||  ||||||||||| || ||||||||||||||| ||||||| |||||    
T  5732485 ggacactcctcggattaggcgtgtccgacaccgacacatataattacactaaaatatgtgattttctcaaattattaacggtg 5732567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 265 - 341
Target Start/End: Original strand, 426487 - 426565
Alignment:
Q  265 acggacactcctcagattaggcgtgtccgacaccaacac--ataattacactgaattatgtgattttctcatattatta 341  Q
    |||||||||||||||||||||||||||||||||| ||||   |||||||| | |||||||||||||| ||| |||||||    
T  426487 acggacactcctcagattaggcgtgtccgacaccgacacttgtaattacatttaattatgtgattttttcaaattatta 426565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 287 - 347
Target Start/End: Original strand, 7265588 - 7265650
Alignment:
Q  287 gtgtccgacaccaacacata--attacactgaattatgtgattttctcatattattagcggtg 347  Q
    |||||||||||| |||||||  ||||||||||||||||||||||||||| |||||||||||||    
T  7265588 gtgtccgacaccgacacatataattacactgaattatgtgattttctcaaattattagcggtg 7265650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 286 - 347
Target Start/End: Complemental strand, 19040417 - 19040354
Alignment:
Q  286 cgtgtccgacaccaacacata--attacactgaattatgtgattttctcatattattagcggtg 347  Q
    ||||||||||||  |||||||  ||||||||||||||||||||||||||| |||||||||||||    
T  19040417 cgtgtccgacacagacacatataattacactgaattatgtgattttctcaaattattagcggtg 19040354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 290 - 347
Target Start/End: Original strand, 32511664 - 32511723
Alignment:
Q  290 tccgacaccaacac--ataattacactgaattatgtgattttctcatattattagcggtg 347  Q
    ||||||||||||||  |||||||||||||||||||||||||||| | |||||||||||||    
T  32511664 tccgacaccaacacttataattacactgaattatgtgattttcttaaattattagcggtg 32511723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 268 - 347
Target Start/End: Complemental strand, 13851819 - 13851738
Alignment:
Q  268 gacactcctcagattaggcgtgtccgacaccaacacata--attacactgaattatgtgattttctcatattattagcggtg 347  Q
    |||| ||||||| ||||||||||| |||| | |||||||  |||||||||||||| || ||||||||| |||||||||||||    
T  13851819 gacattcctcaggttaggcgtgtcagacatcgacacatataattacactgaattacgttattttctcaaattattagcggtg 13851738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 268 - 347
Target Start/End: Original strand, 20371086 - 20371167
Alignment:
Q  268 gacactcctcagattaggcgtgtccgacaccaacacata--attacactgaattatgtgattttctcatattattagcggtg 347  Q
    |||||||||| |||||||| ||| ||||||| |||||||  || ||| ||| |||||||||||||||| |||||||||||||    
T  20371086 gacactcctcggattaggcttgttcgacaccgacacatataatcacattgagttatgtgattttctcaaattattagcggtg 20371167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 294 - 343
Target Start/End: Original strand, 8805576 - 8805625
Alignment:
Q  294 acaccaacacataattacactgaattatgtgattttctcatattattagc 343  Q
    ||||| ||||||||||||||| |||||||||||||||||| |||||||||    
T  8805576 acaccgacacataattacactaaattatgtgattttctcaaattattagc 8805625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 286 - 347
Target Start/End: Complemental strand, 7378044 - 7377981
Alignment:
Q  286 cgtgtccgacaccaacacata--attacactgaattatgtgattttctcatattattagcggtg 347  Q
    ||||||||||||| |||||||  |||||| |||||||||||||||||||| ||| |||||||||    
T  7378044 cgtgtccgacaccgacacatataattacattgaattatgtgattttctcaaatttttagcggtg 7377981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 304 - 343
Target Start/End: Original strand, 9025508 - 9025547
Alignment:
Q  304 ataattacactgaattatgtgattttctcatattattagc 343  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  9025508 ataattacactgaattatgtgattttctcaaattattagc 9025547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 304 - 347
Target Start/End: Complemental strand, 9658924 - 9658881
Alignment:
Q  304 ataattacactgaattatgtgattttctcatattattagcggtg 347  Q
    |||||||||||||||||||||||||||| | |||||||||||||    
T  9658924 ataattacactgaattatgtgattttcttaaattattagcggtg 9658881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 304 - 347
Target Start/End: Original strand, 30866158 - 30866201
Alignment:
Q  304 ataattacactgaattatgtgattttctcatattattagcggtg 347  Q
    ||||||||| |||||||||||||||||||| |||||||||||||    
T  30866158 ataattacattgaattatgtgattttctcaaattattagcggtg 30866201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 292 - 342
Target Start/End: Original strand, 34290079 - 34290129
Alignment:
Q  292 cgacaccaacacataattacactgaattatgtgattttctcatattattag 342  Q
    ||||||| |||||||||||||||||||||||||||| || || ||||||||    
T  34290079 cgacaccgacacataattacactgaattatgtgattctcgcaaattattag 34290129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 299 - 347
Target Start/End: Original strand, 13360381 - 13360429
Alignment:
Q  299 aacacataattacactgaattatgtgattttctcatattattagcggtg 347  Q
    |||| |||||||||||||||||||||||||||||| |||| ||| ||||    
T  13360381 aacatataattacactgaattatgtgattttctcaaattactagtggtg 13360429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 304 - 344
Target Start/End: Original strand, 34073361 - 34073401
Alignment:
Q  304 ataattacactgaattatgtgattttctcatattattagcg 344  Q
    ||||||||||||||||||| |||||||||| ||||||||||    
T  34073361 ataattacactgaattatgagattttctcaaattattagcg 34073401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 304 - 347
Target Start/End: Complemental strand, 1532285 - 1532242
Alignment:
Q  304 ataattacactgaattatgtgattttctcatattattagcggtg 347  Q
    |||||||||||||||||||| ||||| ||| |||||||||||||    
T  1532285 ataattacactgaattatgtaattttatcaaattattagcggtg 1532242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 304 - 347
Target Start/End: Complemental strand, 5462731 - 5462688
Alignment:
Q  304 ataattacactgaattatgtgattttctcatattattagcggtg 347  Q
    ||||||||| |||||||||||||||||||| ||||||| |||||    
T  5462731 ataattacaatgaattatgtgattttctcaaattattaacggtg 5462688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 269 - 329
Target Start/End: Complemental strand, 7027323 - 7027262
Alignment:
Q  269 acactcctcagattaggcgtgtccgacaccaacacata--attacactgaattatgtgatttt 329  Q
    ||||| ||| ||||||||||||| |||||| |||||||  |||||||||||||||||||||||    
T  7027323 acacttctcggattaggcgtgtc-gacaccgacacatataattacactgaattatgtgatttt 7027262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 304 - 343
Target Start/End: Complemental strand, 7086840 - 7086801
Alignment:
Q  304 ataattacactgaattatgtgattttctcatattattagc 343  Q
    ||||||||||| |||||||||||||||||| |||||||||    
T  7086840 ataattacactaaattatgtgattttctcaaattattagc 7086801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 268 - 347
Target Start/End: Complemental strand, 7151498 - 7151414
Alignment:
Q  268 gacactcctcagattaggcgtgtcc---gacaccaacacata--attacactgaattatgtgattttctcatattattagcggtg 347  Q
    ||||||||||  || ||||||||||   ||||||||||||||  |||||||| |||||||||||||| ||| |||||||| ||||    
T  7151498 gacactcctcgcataaggcgtgtcccacgacaccaacacatataattacacttaattatgtgattttttcaaattattagaggtg 7151414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 304 - 343
Target Start/End: Original strand, 7996392 - 7996431
Alignment:
Q  304 ataattacactgaattatgtgattttctcatattattagc 343  Q
    |||||||||||||||||| ||||||||||| |||||||||    
T  7996392 ataattacactgaattatatgattttctcaaattattagc 7996431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 304 - 343
Target Start/End: Complemental strand, 8022409 - 8022370
Alignment:
Q  304 ataattacactgaattatgtgattttctcatattattagc 343  Q
    |||||||||||||||||| ||||||||||| |||||||||    
T  8022409 ataattacactgaattatatgattttctcaaattattagc 8022370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 286 - 342
Target Start/End: Original strand, 8776967 - 8777025
Alignment:
Q  286 cgtgtccgacaccaacacat--aattacactgaattatgtgattttctcatattattag 342  Q
    |||||||||||||||||| |  |||||||||||||| ||||||||| ||| ||||||||    
T  8776967 cgtgtccgacaccaacacttgtaattacactgaattttgtgattttttcaaattattag 8777025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 304 - 347
Target Start/End: Complemental strand, 9027223 - 9027180
Alignment:
Q  304 ataattacactgaattatgtgattttctcatattattagcggtg 347  Q
    |||||||||| ||||||||||||| ||||| |||||||||||||    
T  9027223 ataattacacggaattatgtgattatctcaaattattagcggtg 9027180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 304 - 347
Target Start/End: Complemental strand, 9629428 - 9629385
Alignment:
Q  304 ataattacactgaattatgtgattttctcatattattagcggtg 347  Q
    ||||||||| |||||||||||||||||||| |||||| ||||||    
T  9629428 ataattacattgaattatgtgattttctcaaattattggcggtg 9629385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 304 - 347
Target Start/End: Original strand, 17341678 - 17341721
Alignment:
Q  304 ataattacactgaattatgtgattttctcatattattagcggtg 347  Q
    |||||||||||||||||||||||||| ||| ||||||| |||||    
T  17341678 ataattacactgaattatgtgattttatcaaattattaacggtg 17341721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 287 - 343
Target Start/End: Original strand, 21924930 - 21924988
Alignment:
Q  287 gtgtccgacaccaacacata--attacactgaattatgtgattttctcatattattagc 343  Q
    |||||||||||| |||||||  ||||||||||||||| |||| |||||| |||||||||    
T  21924930 gtgtccgacaccgacacatataattacactgaattatttgatattctcaaattattagc 21924988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 304 - 343
Target Start/End: Complemental strand, 26562734 - 26562695
Alignment:
Q  304 ataattacactgaattatgtgattttctcatattattagc 343  Q
    |||||||||||||||||||||||||||||| ||| |||||    
T  26562734 ataattacactgaattatgtgattttctcaaatttttagc 26562695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 294 - 341
Target Start/End: Complemental strand, 29049940 - 29049893
Alignment:
Q  294 acaccaacacataattacactgaattatgtgattttctcatattatta 341  Q
    |||||||||||| |||||| |||||||||| ||||||||| |||||||    
T  29049940 acaccaacacatgattacattgaattatgtaattttctcaaattatta 29049893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 286 - 342
Target Start/End: Complemental strand, 34595199 - 34595141
Alignment:
Q  286 cgtgtccgacaccaacacat--aattacactgaattatgtgattttctcatattattag 342  Q
    ||||||||||||| |||| |  |||||||||||||||||||||||| ||| ||||||||    
T  34595199 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattag 34595141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 304 - 346
Target Start/End: Complemental strand, 6665258 - 6665216
Alignment:
Q  304 ataattacactgaattatgtgattttctcatattattagcggt 346  Q
    |||||||| |||||||||||||||| |||| ||||||||||||    
T  6665258 ataattactctgaattatgtgatttactcaaattattagcggt 6665216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 304 - 346
Target Start/End: Complemental strand, 9617479 - 9617437
Alignment:
Q  304 ataattacactgaattatgtgattttctcatattattagcggt 346  Q
    ||||||||| |||||||||||||||||||| ||||||| ||||    
T  9617479 ataattacattgaattatgtgattttctcaaattattaccggt 9617437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 287 - 342
Target Start/End: Original strand, 12627572 - 12627629
Alignment:
Q  287 gtgtccgacaccaacacata--attacactgaattatgtgattttctcatattattag 342  Q
    |||||||||| | |||||||  ||||||||||||||||||||||| ||| ||||||||    
T  12627572 gtgtccgacatcgacacatattattacactgaattatgtgattttttcacattattag 12627629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 305 - 343
Target Start/End: Complemental strand, 16766741 - 16766703
Alignment:
Q  305 taattacactgaattatgtgattttctcatattattagc 343  Q
    ||||||||||||||||||||||||| ||| |||||||||    
T  16766741 taattacactgaattatgtgattttttcaaattattagc 16766703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 300 - 342
Target Start/End: Original strand, 34225819 - 34225861
Alignment:
Q  300 acacataattacactgaattatgtgattttctcatattattag 342  Q
    ||||||||||||||||||||||| |||||| ||| ||||||||    
T  34225819 acacataattacactgaattatgcgattttttcaaattattag 34225861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 304 - 341
Target Start/End: Original strand, 7569182 - 7569219
Alignment:
Q  304 ataattacactgaattatgtgattttctcatattatta 341  Q
    |||||||||||||||||||| ||||||||| |||||||    
T  7569182 ataattacactgaattatgtaattttctcaaattatta 7569219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 269 - 342
Target Start/End: Original strand, 7801132 - 7801208
Alignment:
Q  269 acactcctcagattaggcgtgtcc-gacaccaacacat--aattacactgaattatgtgattttctcatattattag 342  Q
    |||||| || |||||||||||||| |||||| |||| |  |||||| ||||||||||||||||| ||| ||||||||    
T  7801132 acactcttcggattaggcgtgtcccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattag 7801208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 342
Target Start/End: Original strand, 10770689 - 10770726
Alignment:
Q  305 taattacactgaattatgtgattttctcatattattag 342  Q
    ||||||||||||||||||||||||| ||| ||||||||    
T  10770689 taattacactgaattatgtgattttttcaaattattag 10770726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 304 - 333
Target Start/End: Original strand, 11591884 - 11591913
Alignment:
Q  304 ataattacactgaattatgtgattttctca 333  Q
    ||||||||||||||||||||||||||||||    
T  11591884 ataattacactgaattatgtgattttctca 11591913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 342
Target Start/End: Complemental strand, 31384964 - 31384927
Alignment:
Q  305 taattacactgaattatgtgattttctcatattattag 342  Q
    ||||||||||||||||||||||||| ||| ||||||||    
T  31384964 taattacactgaattatgtgattttttcaaattattag 31384927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 305 - 341
Target Start/End: Original strand, 5970123 - 5970159
Alignment:
Q  305 taattacactgaattatgtgattttctcatattatta 341  Q
    ||||||||||||||||||||||||| ||| |||||||    
T  5970123 taattacactgaattatgtgattttttcaaattatta 5970159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 307 - 347
Target Start/End: Complemental strand, 10842574 - 10842534
Alignment:
Q  307 attacactgaattatgtgattttctcatattattagcggtg 347  Q
    |||||||| |||||||||||||| ||| |||||||||||||    
T  10842574 attacactaaattatgtgattttttcaaattattagcggtg 10842534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 339
Target Start/End: Original strand, 13364699 - 13364754
Alignment:
Q  286 cgtgtccgacaccaacacata--attacactgaattatgtgattttctcatattat 339  Q
    ||||||| ||||| |||||||  ||||||||||||||| ||||||||||| |||||    
T  13364699 cgtgtccaacaccgacacatatgattacactgaattatatgattttctcaaattat 13364754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 304 - 340
Target Start/End: Original strand, 16388247 - 16388283
Alignment:
Q  304 ataattacactgaattatgtgattttctcatattatt 340  Q
    |||||||||||||||||||||||||| ||| ||||||    
T  16388247 ataattacactgaattatgtgattttttcaaattatt 16388283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 322
Target Start/End: Complemental strand, 18586435 - 18586399
Alignment:
Q  286 cgtgtccgacaccaacacataattacactgaattatg 322  Q
    ||||||| |||||||||||||||||||||||| ||||    
T  18586435 cgtgtccaacaccaacacataattacactgaactatg 18586399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 343
Target Start/End: Complemental strand, 28152163 - 28152105
Alignment:
Q  286 cgtgtccgacaccaacacat--aattacactgaattatgtgattttctcatattattagc 343  Q
    ||||||||||||| |||| |  |||||||||||||||||||||||| ||| |||||||||    
T  28152163 cgtgtccgacaccgacacttgtaattacactgaattatgtgatttt-tcaaattattagc 28152105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 343
Target Start/End: Complemental strand, 28715360 - 28715301
Alignment:
Q  286 cgtgtccgacaccaacacat--aattacactgaattatgtgattttctcatattattagc 343  Q
    ||||||||||||| |||| |  |||||||||||||||||| ||||| ||| |||||||||    
T  28715360 cgtgtccgacaccgacacttgtaattacactgaattatgtcattttttcaaattattagc 28715301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 343
Target Start/End: Original strand, 33001283 - 33001342
Alignment:
Q  286 cgtgtccgacaccaacacata--attacactgaattatgtgattttctcatattattagc 343  Q
    ||||||||||||| |||||||  |||||| | |||||||||||||| ||| |||||||||    
T  33001283 cgtgtccgacaccgacacatataattacatttaattatgtgattttttcaaattattagc 33001342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 286 - 347
Target Start/End: Original strand, 28588668 - 28588731
Alignment:
Q  286 cgtgtccgacaccaacac--ataattacactgaattatgtgattttctcatattattagcggtg 347  Q
    ||||||||||||| ||||  |||||||||||||||||||||||||||||| ||||||| |||||    
T  28588668 cgtgtccgacaccgacacctataattacactgaattatgtgattttctcaaattattaccggtg 28588731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 286 - 347
Target Start/End: Original strand, 30502382 - 30502445
Alignment:
Q  286 cgtgtccgacaccaacacata--attacactgaattatgtgattttctcatattattagcggtg 347  Q
    ||||||||||||| |||||||  |||||||||||||| |||||||||||| |||||||||||||    
T  30502382 cgtgtccgacaccgacacatataattacactgaattaagtgattttctcaaattattagcggtg 30502445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 286 - 347
Target Start/End: Original strand, 30542725 - 30542788
Alignment:
Q  286 cgtgtccgacaccaacacata--attacactgaattatgtgattttctcatattattagcggtg 347  Q
    ||||||||||||| |||||||  |||||||||||||| |||||||||||| |||||||||||||    
T  30542725 cgtgtccgacaccgacacatataattacactgaattaagtgattttctcaaattattagcggtg 30542788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 286 - 342
Target Start/End: Complemental strand, 6770606 - 6770550
Alignment:
Q  286 cgtgtccgacaccaacacataattacactgaattatgtgattttctcatattattag 342  Q
    ||||||||||||  |||||||| ||||||||||||||||||||||| | ||||||||    
T  6770606 cgtgtccgacactgacacataagtacactgaattatgtgattttcttaaattattag 6770550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 304 - 347
Target Start/End: Complemental strand, 3966548 - 3966505
Alignment:
Q  304 ataattacactgaattatgtgattttctcatattattagcggtg 347  Q
    |||||||||||||||| ||||||||||||| |||||||||||||    
T  3966548 ataattacactgaattgtgtgattttctcaaattattagcggtg 3966505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 304 - 343
Target Start/End: Original strand, 6471903 - 6471942
Alignment:
Q  304 ataattacactgaattatgtgattttctcatattattagc 343  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  6471903 ataattacactgaattatgtgattttctcaaattattagc 6471942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 304 - 346
Target Start/End: Original strand, 17593736 - 17593778
Alignment:
Q  304 ataattacactgaattatgtgattttctcatattattagcggt 346  Q
    ||||||||||||||||| |||||||||||| ||||||||||||    
T  17593736 ataattacactgaattacgtgattttctcaaattattagcggt 17593778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 305 - 347
Target Start/End: Complemental strand, 27932279 - 27932237
Alignment:
Q  305 taattacactgaattatgtgattttctcatattattagcggtg 347  Q
    ||||||||||||||||||| ||||||||| |||||||||||||    
T  27932279 taattacactgaattatgtaattttctcaaattattagcggtg 27932237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 36639762 - 36639795
Alignment:
Q  1 caatcatatgtgtgactttagaagtagttatgat 34  Q
    ||||||||||||||||||||||||||||||||||    
T  36639762 caatcatatgtgtgactttagaagtagttatgat 36639795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 347
Target Start/End: Complemental strand, 34879415 - 34879352
Alignment:
Q  286 cgtgtccgacaccaacacata--attacactgaattatgtgattttctcatattattagcggtg 347  Q
    ||||||||||| | |||||||  ||||||||||||||| ||||||||||| ||| |||||||||    
T  34879415 cgtgtccgacatcgacacatattattacactgaattatatgattttctcaaatttttagcggtg 34879352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 286 - 342
Target Start/End: Complemental strand, 6247687 - 6247629
Alignment:
Q  286 cgtgtccgacaccaacacat--aattacactgaattatgtgattttctcatattattag 342  Q
    ||||||||||||| |||| |  |||||||||||||||||||||||| ||| ||||||||    
T  6247687 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattag 6247629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 287 - 343
Target Start/End: Original strand, 21191051 - 21191109
Alignment:
Q  287 gtgtccgacaccaacacat--aattacactgaattatgtgattttctcatattattagc 343  Q
    |||||||||||| |||| |  |||||||||||||||||||||||| ||| |||||||||    
T  21191051 gtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagc 21191109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 286 - 338
Target Start/End: Original strand, 21194199 - 21194253
Alignment:
Q  286 cgtgtccgacaccaacac--ataattacactgaattatgtgattttctcatatta 338  Q
    |||||||||||| |||||  || ||||||||||||||||||||||||||| ||||    
T  21194199 cgtgtccgacactaacaccaatgattacactgaattatgtgattttctcaaatta 21194253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 304 - 347
Target Start/End: Complemental strand, 27144508 - 27144465
Alignment:
Q  304 ataattacactgaattatgtgattttctcatattattagcggtg 347  Q
    ||||||||||| ||||||||||||| |||| |||||||||||||    
T  27144508 ataattacactaaattatgtgatttcctcaaattattagcggtg 27144465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 304 - 347
Target Start/End: Complemental strand, 36838588 - 36838545
Alignment:
Q  304 ataattacactgaattatgtgattttctcatattattagcggtg 347  Q
    ||||||||||| |||||||| ||||||||| |||||||||||||    
T  36838588 ataattacactaaattatgtaattttctcaaattattagcggtg 36838545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 304 - 343
Target Start/End: Original strand, 41091271 - 41091310
Alignment:
Q  304 ataattacactgaattatgtgattttctcatattattagc 343  Q
    |||||||||||||||||||||||||||||| || ||||||    
T  41091271 ataattacactgaattatgtgattttctcaaatcattagc 41091310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 304 - 346
Target Start/End: Original strand, 5467992 - 5468034
Alignment:
Q  304 ataattacactgaattatgtgattttctcatattattagcggt 346  Q
    |||||||||||||||||||||||||| ||| ||||||| ||||    
T  5467992 ataattacactgaattatgtgattttatcaaattattatcggt 5468034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 288 - 343
Target Start/End: Original strand, 16203791 - 16203848
Alignment:
Q  288 tgtccgacaccaacacata--attacactgaattatgtgattttctcatattattagc 343  Q
    ||||||||||| |||||||  |||||||| ||||||| |||||||||| |||||||||    
T  16203791 tgtccgacaccgacacatataattacactaaattatgagattttctcaaattattagc 16203848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 306 - 344
Target Start/End: Complemental strand, 19438386 - 19438348
Alignment:
Q  306 aattacactgaattatgtgattttctcatattattagcg 344  Q
    |||||||||||||||||||||||||||| ||||| ||||    
T  19438386 aattacactgaattatgtgattttctcaaattatcagcg 19438348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 305 - 343
Target Start/End: Original strand, 21576760 - 21576798
Alignment:
Q  305 taattacactgaattatgtgattttctcatattattagc 343  Q
    ||||||||||||||||||||||||| ||| |||||||||    
T  21576760 taattacactgaattatgtgattttttcaaattattagc 21576798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 304 - 338
Target Start/End: Original strand, 24273044 - 24273078
Alignment:
Q  304 ataattacactgaattatgtgattttctcatatta 338  Q
    |||||||||||||||||||||||||||||| ||||    
T  24273044 ataattacactgaattatgtgattttctcaaatta 24273078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 304 - 338
Target Start/End: Complemental strand, 24389170 - 24389136
Alignment:
Q  304 ataattacactgaattatgtgattttctcatatta 338  Q
    |||||||||||||||||||||||||||||| ||||    
T  24389170 ataattacactgaattatgtgattttctcaaatta 24389136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 304 - 346
Target Start/End: Complemental strand, 30098371 - 30098329
Alignment:
Q  304 ataattacactgaattatgtgattttctcatattattagcggt 346  Q
    ||||||||| |||||||||||||||||||| ||||||| ||||    
T  30098371 ataattacattgaattatgtgattttctcaaattattaacggt 30098329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 304 - 342
Target Start/End: Complemental strand, 35017082 - 35017044
Alignment:
Q  304 ataattacactgaattatgtgattttctcatattattag 342  Q
    ||||||||||| |||||||||||||||||| ||||||||    
T  35017082 ataattacactaaattatgtgattttctcaaattattag 35017044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 305 - 343
Target Start/End: Complemental strand, 39698585 - 39698547
Alignment:
Q  305 taattacactgaattatgtgattttctcatattattagc 343  Q
    ||||||||||||||||||||||||| ||| |||||||||    
T  39698585 taattacactgaattatgtgattttttcaaattattagc 39698547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 304 - 333
Target Start/End: Original strand, 23016003 - 23016032
Alignment:
Q  304 ataattacactgaattatgtgattttctca 333  Q
    ||||||||||||||||||||||||||||||    
T  23016003 ataattacactgaattatgtgattttctca 23016032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 35035630 - 35035597
Alignment:
Q  1 caatcatatgtgtgactttagaagtagttatgat 34  Q
    ||||||||||||||| ||||||||||||||||||    
T  35035630 caatcatatgtgtgattttagaagtagttatgat 35035597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 304 - 344
Target Start/End: Complemental strand, 12927699 - 12927659
Alignment:
Q  304 ataattacactgaattatgtgattttctcatattattagcg 344  Q
    ||||||||||| |||||| ||||||||||| ||||||||||    
T  12927699 ataattacactaaattatatgattttctcaaattattagcg 12927659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 339
Target Start/End: Original strand, 18421835 - 18421890
Alignment:
Q  286 cgtgtccgacaccaacacata--attacactgaattatgtgattttctcatattat 339  Q
    |||||||||| || |||||||  ||||||||| ||||||||||||||||| |||||    
T  18421835 cgtgtccgacgccgacacatataattacactggattatgtgattttctcaaattat 18421890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 343
Target Start/End: Original strand, 21194117 - 21194176
Alignment:
Q  286 cgtgtccgacaccaacac--ataattacactgaattatgtgattttctcatattattagc 343  Q
    ||||||| ||||||| ||  ||||||||||||||| |||||||||||||| |||| ||||    
T  21194117 cgtgtccaacaccaatacctataattacactgaatgatgtgattttctcaaattactagc 21194176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 286 - 347
Target Start/End: Original strand, 8423712 - 8423775
Alignment:
Q  286 cgtgtccgacaccaacac--ataattacactgaattatgtgattttctcatattattagcggtg 347  Q
    ||||||||||||| |||   |||||||||||||||||||||||||||||| |||||||||||||    
T  8423712 cgtgtccgacaccgacatttataattacactgaattatgtgattttctcaaattattagcggtg 8423775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 300 - 347
Target Start/End: Complemental strand, 16189758 - 16189711
Alignment:
Q  300 acacataattacactgaattatgtgattttctcatattattagcggtg 347  Q
    |||||||||||||||||||||||||||||||||| ||| |||||||||    
T  16189758 acacataattacactgaattatgtgattttctcaaatttttagcggtg 16189711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 304 - 347
Target Start/End: Complemental strand, 903967 - 903924
Alignment:
Q  304 ataattacactgaattatgtgattttctcatattattagcggtg 347  Q
    |||||||||||||||||||||||||||||| ||||||| |||||    
T  903967 ataattacactgaattatgtgattttctcaaattattaacggtg 903924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 287 - 342
Target Start/End: Original strand, 17425386 - 17425441
Alignment:
Q  287 gtgtccgacaccaacacataattacactgaattatgtgattttctcatattattag 342  Q
    ||||| |||||  ||||||||||||||||||||||| |||||||||| ||||||||    
T  17425386 gtgtctgacacagacacataattacactgaattatgcgattttctcaaattattag 17425441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 304 - 347
Target Start/End: Original strand, 22440614 - 22440657
Alignment:
Q  304 ataattacactgaattatgtgattttctcatattattagcggtg 347  Q
    |||||||||||||||||||||||||||||| ||||||| |||||    
T  22440614 ataattacactgaattatgtgattttctcaaattattaacggtg 22440657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 304 - 347
Target Start/End: Complemental strand, 36635369 - 36635326
Alignment:
Q  304 ataattacactgaattatgtgattttctcatattattagcggtg 347  Q
    |||||||||||||||||||||||||||||| |||||||| ||||    
T  36635369 ataattacactgaattatgtgattttctcaaattattagtggtg 36635326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 304 - 347
Target Start/End: Complemental strand, 40613495 - 40613452
Alignment:
Q  304 ataattacactgaattatgtgattttctcatattattagcggtg 347  Q
    |||||||||||||||||||||||||||||| | |||||||||||    
T  40613495 ataattacactgaattatgtgattttctcaaaatattagcggtg 40613452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 286 - 342
Target Start/End: Original strand, 54580017 - 54580075
Alignment:
Q  286 cgtgtccgacaccaacac--ataattacactgaattatgtgattttctcatattattag 342  Q
    ||||||||||||| ||||  |||||||||||||||||||||||||| ||| ||||||||    
T  54580017 cgtgtccgacaccgacacttataattacactgaattatgtgattttttcaaattattag 54580075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 300 - 343
Target Start/End: Complemental strand, 56257982 - 56257939
Alignment:
Q  300 acacataattacactgaattatgtgattttctcatattattagc 343  Q
    |||||||||||||||||||||| ||||||||||| |||||||||    
T  56257982 acacataattacactgaattatatgattttctcaaattattagc 56257939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 300 - 346
Target Start/End: Complemental strand, 16184866 - 16184820
Alignment:
Q  300 acacataattacactgaattatgtgattttctcatattattagcggt 346  Q
    |||||||||| ||||||||| ||||||||||||| ||||||||||||    
T  16184866 acacataatttcactgaattgtgtgattttctcaaattattagcggt 16184820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 306 - 347
Target Start/End: Original strand, 38148741 - 38148782
Alignment:
Q  306 aattacactgaattatgtgattttctcatattattagcggtg 347  Q
    |||||||||||||||||||||||||||| | |||||||||||    
T  38148741 aattacactgaattatgtgattttctcaaactattagcggtg 38148782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 304 - 347
Target Start/End: Complemental strand, 1747257 - 1747214
Alignment:
Q  304 ataattacactgaattatgtgattttctcatattattagcggtg 347  Q
    ||||||| ||||||||||||||||||||||  ||||||||||||    
T  1747257 ataattaaactgaattatgtgattttctcaatttattagcggtg 1747214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 300 - 339
Target Start/End: Complemental strand, 2234299 - 2234260
Alignment:
Q  300 acacataattacactgaattatgtgattttctcatattat 339  Q
    ||||||||||||| |||||||||||||||||||| |||||    
T  2234299 acacataattacattgaattatgtgattttctcaaattat 2234260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 291 - 343
Target Start/End: Complemental strand, 15029825 - 15029771
Alignment:
Q  291 ccgacaccaacacata--attacactgaattatgtgattttctcatattattagc 343  Q
    ||||||||||||||||  |||||||||||||||||||| || ||| |||||||||    
T  15029825 ccgacaccaacacatataattacactgaattatgtgatattttcaaattattagc 15029771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 308 - 347
Target Start/End: Original strand, 30522933 - 30522972
Alignment:
Q  308 ttacactgaattatgtgattttctcatattattagcggtg 347  Q
    |||||||||||||||||||||||||| || ||||||||||    
T  30522933 ttacactgaattatgtgattttctcaaataattagcggtg 30522972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 304 - 347
Target Start/End: Original strand, 30982892 - 30982935
Alignment:
Q  304 ataattacactgaattatgtgattttctcatattattagcggtg 347  Q
    |||||||||||||| ||||||||||||||| || ||||||||||    
T  30982892 ataattacactgaaatatgtgattttctcaaatcattagcggtg 30982935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 305 - 343
Target Start/End: Original strand, 11596367 - 11596405
Alignment:
Q  305 taattacactgaattatgtgattttctcatattattagc 343  Q
    ||||||||||||||||||||||||| ||| |||||||||    
T  11596367 taattacactgaattatgtgattttttcaaattattagc 11596405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 269 - 347
Target Start/End: Complemental strand, 17446146 - 17446073
Alignment:
Q  269 acactcctcagattaggcgtgtccgacaccaacacataattacactgaattatgtgattttctcatattattagcggtg 347  Q
    ||||| |||||||||| ||||||||||||||     | |||||||| |||||||||||||||| | |||||||| ||||    
T  17446146 acactactcagattagacgtgtccgacacca-----tgattacactaaattatgtgattttcttaaattattagtggtg 17446073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 305 - 343
Target Start/End: Original strand, 28964263 - 28964301
Alignment:
Q  305 taattacactgaattatgtgattttctcatattattagc 343  Q
    ||||||||||||||||||||||||| ||| |||||||||    
T  28964263 taattacactgaattatgtgattttttcaaattattagc 28964301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 305 - 343
Target Start/End: Complemental strand, 29205488 - 29205450
Alignment:
Q  305 taattacactgaattatgtgattttctcatattattagc 343  Q
    ||||||||||||||||||||||||| ||| |||||||||    
T  29205488 taattacactgaattatgtgattttttcaaattattagc 29205450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 303 - 341
Target Start/End: Complemental strand, 32910597 - 32910559
Alignment:
Q  303 cataattacactgaattatgtgattttctcatattatta 341  Q
    ||||||||||||||||||||| ||||||||| |||||||    
T  32910597 cataattacactgaattatgtcattttctcaaattatta 32910559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 292 - 342
Target Start/End: Original strand, 49652974 - 49653024
Alignment:
Q  292 cgacaccaacacataattacactgaattatgtgattttctcatattattag 342  Q
    ||||||||||| ||||||| |||||||||| ||||||||| | ||||||||    
T  49652974 cgacaccaacatataattatactgaattatctgattttcttaaattattag 49653024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 304 - 341
Target Start/End: Original strand, 5775372 - 5775409
Alignment:
Q  304 ataattacactgaattatgtgattttctcatattatta 341  Q
    ||||||||||| |||||||||||||||||| |||||||    
T  5775372 ataattacacttaattatgtgattttctcaaattatta 5775409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 339
Target Start/End: Original strand, 18576038 - 18576086
Alignment:
Q  293 gacaccaacacata--attacactgaattatgtgattttctcatattat 339  Q
    ||||||||||||||  ||||||| ||||||||||||||||||| |||||    
T  18576038 gacaccaacacatataattacaccgaattatgtgattttctcaaattat 18576086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 304 - 341
Target Start/End: Complemental strand, 24343552 - 24343515
Alignment:
Q  304 ataattacactgaattatgtgattttctcatattatta 341  Q
    |||||||||||||||||||| ||||||||| |||||||    
T  24343552 ataattacactgaattatgtaattttctcaaattatta 24343515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 345
Target Start/End: Complemental strand, 33950200 - 33950140
Alignment:
Q  287 gtgtccgacaccaacacata--attacactgaattatgtgattttctcatattattagcgg 345  Q
    ||||| |||||| |||||||  |||||| | |||||||||||||||||| |||||||||||    
T  33950200 gtgtctgacaccgacacatatgattacattaaattatgtgattttctcaaattattagcgg 33950140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 304 - 340
Target Start/End: Complemental strand, 9996885 - 9996849
Alignment:
Q  304 ataattacactgaattatgtgattttctcatattatt 340  Q
    ||||||| |||||||||||||||||||||| ||||||    
T  9996885 ataattatactgaattatgtgattttctcaaattatt 9996849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 295 - 343
Target Start/End: Complemental strand, 16886663 - 16886615
Alignment:
Q  295 caccaacacataattacactgaattatgtgattttctcatattattagc 343  Q
    ||||||||||| ||| ||||||||||||||| ||||||| ||| |||||    
T  16886663 caccaacacattatttcactgaattatgtgaatttctcaaatttttagc 16886615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 343
Target Start/End: Original strand, 23292980 - 23293039
Alignment:
Q  286 cgtgtccgacaccaacacat--aattacactgaattatgtgattttctcatattattagc 343  Q
    ||||||||||||| |||| |  ||||| |||||||||||||||||| ||| |||||||||    
T  23292980 cgtgtccgacaccgacacttgtaattatactgaattatgtgattttttcaaattattagc 23293039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 314 - 346
Target Start/End: Original strand, 34200295 - 34200327
Alignment:
Q  314 tgaattatgtgattttctcatattattagcggt 346  Q
    |||||||||||||||||||| ||||||||||||    
T  34200295 tgaattatgtgattttctcaaattattagcggt 34200327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 304 - 347
Target Start/End: Original strand, 35723398 - 35723442
Alignment:
Q  304 ataattacactgaattatgtg-attttctcatattattagcggtg 347  Q
    ||||||||| ||||||||||| ||||||||| |||||||||||||    
T  35723398 ataattacattgaattatgtgtattttctcaaattattagcggtg 35723442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 341
Target Start/End: Original strand, 36386207 - 36386262
Alignment:
Q  288 tgtccgacaccaacacat--aattacactgaattatgtgattttctcatattatta 341  Q
    |||||||||||||||| |  ||||||||||||||||||  |||||||| |||||||    
T  36386207 tgtccgacaccaacacctttaattacactgaattatgtccttttctcaaattatta 36386262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 53)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 287 - 343
Target Start/End: Original strand, 25452145 - 25452201
Alignment:
Q  287 gtgtccgacaccaacacataattacactgaattatgtgattttctcatattattagc 343  Q
    ||||| |||||| ||||||||||||||||||||||| |||||||||| |||||||||    
T  25452145 gtgtctgacaccgacacataattacactgaattatgagattttctcaaattattagc 25452201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 286 - 347
Target Start/End: Complemental strand, 36878526 - 36878463
Alignment:
Q  286 cgtgtccgacaccaacac--ataattacactgaattatgtgattttctcatattattagcggtg 347  Q
    |||||| |||||| ||||  |||||||||||||||||||||||||||||| |||||||||||||    
T  36878526 cgtgtcagacaccgacacctataattacactgaattatgtgattttctcaaattattagcggtg 36878463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 279 - 347
Target Start/End: Complemental strand, 9709892 - 9709822
Alignment:
Q  279 gattaggcgtgtccgacaccaacacata--attacactgaattatgtgattttctcatattattagcggtg 347  Q
    ||||| |||||||||||||| |||||||  ||||||  ||||||||||||||||||| |||||||||||||    
T  9709892 gattaagcgtgtccgacaccgacacatataattacaacgaattatgtgattttctcaaattattagcggtg 9709822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 287 - 341
Target Start/End: Original strand, 2288164 - 2288218
Alignment:
Q  287 gtgtccgacaccaacacataattacactgaattatgtgattttctcatattatta 341  Q
    |||||||||||| ||||||||||||| |||||||||||||||||| | |||||||    
T  2288164 gtgtccgacaccgacacataattacattgaattatgtgattttcttaaattatta 2288218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 292 - 347
Target Start/End: Complemental strand, 6427409 - 6427352
Alignment:
Q  292 cgacaccaacacata--attacactgaattatgtgattttctcatattattagcggtg 347  Q
    |||||||||||||||  |||||| |||||||||||||||||||| |||||||||||||    
T  6427409 cgacaccaacacatataattacattgaattatgtgattttctcaaattattagcggtg 6427352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 292 - 347
Target Start/End: Original strand, 20157350 - 20157407
Alignment:
Q  292 cgacaccaacacata--attacactgaattatgtgattttctcatattattagcggtg 347  Q
    ||||||| |||||||  ||||||||||||||||||||||||||| |||||||||||||    
T  20157350 cgacaccgacacatatgattacactgaattatgtgattttctcacattattagcggtg 20157407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 265 - 347
Target Start/End: Original strand, 398742 - 398822
Alignment:
Q  265 acggacactcctcagattaggcgtgtcc--gacaccaacacataattacactgaattatgtgattttctcatattattagcggtg 347  Q
    ||||||||| || |||||||||||||||  |||||| |    ||||||||||||||||||||||||| ||| |||||||||||||    
T  398742 acggacacttcttagattaggcgtgtcccggacaccta----taattacactgaattatgtgattttttcaaattattagcggtg 398822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 286 - 343
Target Start/End: Complemental strand, 13436523 - 13436464
Alignment:
Q  286 cgtgtccgacaccaacacata--attacactgaattatgtgattttctcatattattagc 343  Q
    |||||||||||||||||||||  |||||||||||||||||||||| || | |||||||||    
T  13436523 cgtgtccgacaccaacacatataattacactgaattatgtgatttccttaaattattagc 13436464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 293 - 346
Target Start/End: Original strand, 27471567 - 27471622
Alignment:
Q  293 gacaccaacacat--aattacactgaattatgtgattttctcatattattagcggt 346  Q
    |||||||||||||  ||||||||||||||||||| |||||||| ||||||||||||    
T  27471567 gacaccaacacatgtaattacactgaattatgtgcttttctcaaattattagcggt 27471622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 304 - 347
Target Start/End: Original strand, 5898280 - 5898323
Alignment:
Q  304 ataattacactgaattatgtgattttctcatattattagcggtg 347  Q
    |||||||||||||||||||||||||| ||| |||||||||||||    
T  5898280 ataattacactgaattatgtgattttttcagattattagcggtg 5898323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 304 - 347
Target Start/End: Original strand, 25098569 - 25098612
Alignment:
Q  304 ataattacactgaattatgtgattttctcatattattagcggtg 347  Q
    |||||||||||||||||||||||||||||| ||||| |||||||    
T  25098569 ataattacactgaattatgtgattttctcaaattatcagcggtg 25098612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 304 - 347
Target Start/End: Complemental strand, 34298481 - 34298438
Alignment:
Q  304 ataattacactgaattatgtgattttctcatattattagcggtg 347  Q
    |||||||||||||||||||||||||||||| |||||||| ||||    
T  34298481 ataattacactgaattatgtgattttctcaaattattagtggtg 34298438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 304 - 347
Target Start/End: Complemental strand, 34371758 - 34371716
Alignment:
Q  304 ataattacactgaattatgtgattttctcatattattagcggtg 347  Q
    |||||||||||||||||||||||||||||| |||||||||||||    
T  34371758 ataattacactgaattatgtgattttctca-attattagcggtg 34371716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 304 - 347
Target Start/End: Complemental strand, 36906042 - 36905999
Alignment:
Q  304 ataattacactgaattatgtgattttctcatattattagcggtg 347  Q
    |||||||| ||||||||||||||||||||| |||||||||||||    
T  36906042 ataattactctgaattatgtgattttctcagattattagcggtg 36905999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 287 - 347
Target Start/End: Original strand, 39953141 - 39953203
Alignment:
Q  287 gtgtccgacaccaacacata--attacactgaattatgtgattttctcatattattagcggtg 347  Q
    |||||||||||| |||||||  |||||||| |||||||||||||||| | |||||||||||||    
T  39953141 gtgtccgacaccgacacatacaattacactaaattatgtgattttctaaaattattagcggtg 39953203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 304 - 343
Target Start/End: Complemental strand, 40181916 - 40181877
Alignment:
Q  304 ataattacactgaattatgtgattttctcatattattagc 343  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  40181916 ataattacactgaattatgtgattttctcaaattattagc 40181877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 286 - 341
Target Start/End: Original strand, 1864874 - 1864931
Alignment:
Q  286 cgtgtccgacaccaacacata--attacactgaattatgtgattttctcatattatta 341  Q
    ||||||| ||||| |||||||  ||||||||||||||||||||||||||| |||||||    
T  1864874 cgtgtccaacaccgacacatataattacactgaattatgtgattttctcaaattatta 1864931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 309 - 347
Target Start/End: Original strand, 2896140 - 2896178
Alignment:
Q  309 tacactgaattatgtgattttctcatattattagcggtg 347  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  2896140 tacactgaattatgtgattttctcaaattattagcggtg 2896178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 304 - 342
Target Start/End: Original strand, 7918225 - 7918263
Alignment:
Q  304 ataattacactgaattatgtgattttctcatattattag 342  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  7918225 ataattacactgaattatgtgattttctcaaattattag 7918263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 305 - 343
Target Start/End: Complemental strand, 31015087 - 31015049
Alignment:
Q  305 taattacactgaattatgtgattttctcatattattagc 343  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  31015087 taattacactgaattatgtgattttctcaaattattagc 31015049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 306 - 343
Target Start/End: Original strand, 12443476 - 12443513
Alignment:
Q  306 aattacactgaattatgtgattttctcatattattagc 343  Q
    |||||||||||||||||||||||||||| |||||||||    
T  12443476 aattacactgaattatgtgattttctcaaattattagc 12443513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 304 - 345
Target Start/End: Complemental strand, 44482275 - 44482234
Alignment:
Q  304 ataattacactgaattatgtgattttctcatattattagcgg 345  Q
    |||||||||||||||||||||||||||||| ||||| |||||    
T  44482275 ataattacactgaattatgtgattttctcaaattataagcgg 44482234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 347
Target Start/End: Original strand, 14332636 - 14332699
Alignment:
Q  286 cgtgtccgacaccaacacata--attacactgaattatgtgattttctcatattattagcggtg 347  Q
    ||||||||||||| | |||||  |||||||| |||||||||||||||||| |||||||| ||||    
T  14332636 cgtgtccgacaccgagacatataattacactaaattatgtgattttctcaaattattagtggtg 14332699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 307 - 347
Target Start/End: Original strand, 17831548 - 17831588
Alignment:
Q  307 attacactgaattatgtgattttctcatattattagcggtg 347  Q
    |||||||||||| |||||||||||||| |||||||||||||    
T  17831548 attacactgaataatgtgattttctcaaattattagcggtg 17831588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 307 - 347
Target Start/End: Original strand, 26238129 - 26238169
Alignment:
Q  307 attacactgaattatgtgattttctcatattattagcggtg 347  Q
    ||||||||||||||||| ||||||||| |||||||||||||    
T  26238129 attacactgaattatgttattttctcaaattattagcggtg 26238169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 347
Target Start/End: Original strand, 41877464 - 41877527
Alignment:
Q  286 cgtgtccgacaccaacacat--aattacactgaattatgtgattttctcatattattagcggtg 347  Q
    ||||||||||||| |||| |  ||||||||| |||||||| ||||||||| |||||||||||||    
T  41877464 cgtgtccgacaccgacacttgtaattacactaaattatgtaattttctcaaattattagcggtg 41877527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 304 - 343
Target Start/End: Original strand, 1486723 - 1486762
Alignment:
Q  304 ataattacactgaattatgtgattttctcatattattagc 343  Q
    |||||||||||||||||||||||||| ||| |||||||||    
T  1486723 ataattacactgaattatgtgattttttcaaattattagc 1486762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 304 - 347
Target Start/End: Complemental strand, 10233298 - 10233255
Alignment:
Q  304 ataattacactgaattatgtgattttctcatattattagcggtg 347  Q
    ||||||||||||||||||||||||||||||  ||||||| ||||    
T  10233298 ataattacactgaattatgtgattttctcaatttattagtggtg 10233255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 265 - 330
Target Start/End: Original strand, 17705555 - 17705626
Alignment:
Q  265 acggacactcctcagattaggcgtgtc-----cgacacca-acacataattacactgaattatgtgattttc 330  Q
    ||||||||||||||||||| |||||||     |||||| | ||| |||||||||||||||||||||||||||    
T  17705555 acggacactcctcagattaagcgtgtcgcgtccgacacgacacatataattacactgaattatgtgattttc 17705626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 304 - 339
Target Start/End: Complemental strand, 19324607 - 19324572
Alignment:
Q  304 ataattacactgaattatgtgattttctcatattat 339  Q
    |||||||||||||||||||||||||||||| |||||    
T  19324607 ataattacactgaattatgtgattttctcaaattat 19324572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 304 - 339
Target Start/End: Complemental strand, 25361931 - 25361896
Alignment:
Q  304 ataattacactgaattatgtgattttctcatattat 339  Q
    |||||||||||||||||||||||||||||| |||||    
T  25361931 ataattacactgaattatgtgattttctcaaattat 25361896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 287 - 331
Target Start/End: Complemental strand, 30749904 - 30749858
Alignment:
Q  287 gtgtccgacaccaacacata--attacactgaattatgtgattttct 331  Q
    |||||||||||| |||||||  |||||||||||||||||||||||||    
T  30749904 gtgtccgacaccgacacatataattacactgaattatgtgattttct 30749858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 287 - 331
Target Start/End: Complemental strand, 30771355 - 30771309
Alignment:
Q  287 gtgtccgacaccaacacata--attacactgaattatgtgattttct 331  Q
    |||||||||||| |||||||  |||||||||||||||||||||||||    
T  30771355 gtgtccgacaccgacacatataattacactgaattatgtgattttct 30771309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 279 - 343
Target Start/End: Original strand, 31672882 - 31672948
Alignment:
Q  279 gattaggcgtgtccgacaccaacacat--aattacactgaattatgtgattttctcatattattagc 343  Q
    |||||||||||||||||||| | || |  ||||||||||||||| |||||||| ||| |||||||||    
T  31672882 gattaggcgtgtccgacaccgagacttgtaattacactgaattaagtgattttttcaaattattagc 31672948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 304 - 347
Target Start/End: Complemental strand, 38503365 - 38503322
Alignment:
Q  304 ataattacactgaattatgtgattttctcatattattagcggtg 347  Q
    |||||||||||||| ||| ||||||||||| |||||||||||||    
T  38503365 ataattacactgaaatatatgattttctcaaattattagcggtg 38503322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 305 - 343
Target Start/End: Complemental strand, 113343 - 113305
Alignment:
Q  305 taattacactgaattatgtgattttctcatattattagc 343  Q
    ||||||||||||||||||||||||| ||| |||||||||    
T  113343 taattacactgaattatgtgattttttcaaattattagc 113305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 305 - 347
Target Start/End: Original strand, 5376515 - 5376557
Alignment:
Q  305 taattacactgaattatgtgattttctcatattattagcggtg 347  Q
    ||||||||||||||||||| ||||||| | |||||||||||||    
T  5376515 taattacactgaattatgttattttcttaaattattagcggtg 5376557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 292 - 347
Target Start/End: Complemental strand, 9828103 - 9828046
Alignment:
Q  292 cgacaccaacacataa--ttacactgaattatgtgattttctcatattattagcggtg 347  Q
    ||||||| ||||||||  |||||||||||||||||||||| ||| |||||||| ||||    
T  9828103 cgacaccgacacataaaattacactgaattatgtgattttatcaaattattagtggtg 9828046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 305 - 347
Target Start/End: Original strand, 10572604 - 10572646
Alignment:
Q  305 taattacactgaattatgtgattttctcatattattagcggtg 347  Q
    ||||||||| ||||||||||||||||||| |||||||| ||||    
T  10572604 taattacaccgaattatgtgattttctcaaattattagtggtg 10572646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 309 - 347
Target Start/End: Complemental strand, 19909337 - 19909299
Alignment:
Q  309 tacactgaattatgtgattttctcatattattagcggtg 347  Q
    |||||||| |||||||||||||||| |||||||||||||    
T  19909337 tacactgagttatgtgattttctcaaattattagcggtg 19909299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 288 - 343
Target Start/End: Original strand, 38075966 - 38076023
Alignment:
Q  288 tgtccgacaccaacacata--attacactgaattatgtgattttctcatattattagc 343  Q
    ||||||||||| |||||||  |||||||||| ||||||||||| |||| |||||||||    
T  38075966 tgtccgacaccgacacatatgattacactgacttatgtgatttactcaaattattagc 38076023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 309 - 347
Target Start/End: Original strand, 40285673 - 40285711
Alignment:
Q  309 tacactgaattatgtgattttctcatattattagcggtg 347  Q
    |||||||||||||| |||||||||| |||||||||||||    
T  40285673 tacactgaattatgcgattttctcaaattattagcggtg 40285711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 300 - 329
Target Start/End: Original strand, 9033017 - 9033046
Alignment:
Q  300 acacataattacactgaattatgtgatttt 329  Q
    ||||||||||||||||||||||||||||||    
T  9033017 acacataattacactgaattatgtgatttt 9033046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 310 - 347
Target Start/End: Original strand, 10474997 - 10475034
Alignment:
Q  310 acactgaattatgtgattttctcatattattagcggtg 347  Q
    ||||||||||||||||||||||||  ||||||||||||    
T  10474997 acactgaattatgtgattttctcaagttattagcggtg 10475034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 342
Target Start/End: Complemental strand, 14248891 - 14248837
Alignment:
Q  286 cgtgtccgacaccaacacataattacactgaattatgtgattttctcatattattag 342  Q
    ||||||||||||  |||||||||||||||||||||  ||||||| ||| ||||||||    
T  14248891 cgtgtccgacactgacacataattacactgaatta--tgattttttcaaattattag 14248837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 342
Target Start/End: Original strand, 24577201 - 24577238
Alignment:
Q  305 taattacactgaattatgtgattttctcatattattag 342  Q
    ||||||||||||||||||||||||| ||| ||||||||    
T  24577201 taattacactgaattatgtgattttttcaaattattag 24577238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 299 - 343
Target Start/End: Complemental strand, 1262934 - 1262890
Alignment:
Q  299 aacacataattacactgaattatgtgattttctcatattattagc 343  Q
    ||||| |||||| | |||||||||||||||||||| |||||||||    
T  1262934 aacacttaattatattgaattatgtgattttctcaaattattagc 1262890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 340
Target Start/End: Complemental strand, 18337393 - 18337338
Alignment:
Q  287 gtgtccgacaccaacacat--aattacactgaattatgtgattttctcatattatt 340  Q
    |||||||||||| |||| |  |||||||||||||||||||||||| ||| ||||||    
T  18337393 gtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattatt 18337338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 343
Target Start/End: Original strand, 22515881 - 22515940
Alignment:
Q  286 cgtgtccgacaccaacacat--aattacactgaattatgtgattttctcatattattagc 343  Q
    ||||||||||||| |||| |  ||||||||| |||||||||||||| ||| |||||||||    
T  22515881 cgtgtccgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagc 22515940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 294 - 343
Target Start/End: Complemental strand, 23738735 - 23738684
Alignment:
Q  294 acaccaacacat--aattacactgaattatgtgattttctcatattattagc 343  Q
    ||||||||||||  |||| ||||||||||||||||||| ||| |||||||||    
T  23738735 acaccaacacatttaattgcactgaattatgtgattttttcaaattattagc 23738684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 347
Target Start/End: Complemental strand, 28674865 - 28674802
Alignment:
Q  286 cgtgtccgacaccaacacata--attacactgaattatgtgattttctcatattattagcggtg 347  Q
    |||||| |||||||||| |||  |||| |||||||||||| ||||||||| ||||||| |||||    
T  28674865 cgtgtctgacaccaacatatataattatactgaattatgtaattttctcaaattattaacggtg 28674802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 343
Target Start/End: Original strand, 38078655 - 38078714
Alignment:
Q  286 cgtgtccgacaccaacacat--aattacactgaattatgtgattttctcatattattagc 343  Q
    ||||||||||||| |||| |  ||||||| |||||||||||||||| ||| |||||||||    
T  38078655 cgtgtccgacaccgacacttgtaattacattgaattatgtgattttttcaaattattagc 38078714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 305 - 341
Target Start/End: Original strand, 40258948 - 40258984
Alignment:
Q  305 taattacactgaattatgtgattttctcatattatta 341  Q
    ||||||||||||||||||||||||| ||| |||||||    
T  40258948 taattacactgaattatgtgattttttcaaattatta 40258984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 304 - 347
Target Start/End: Original strand, 44539 - 44582
Alignment:
Q  304 ataattacactgaattatgtgattttctcatattattagcggtg 347  Q
    |||||||||||||||||||||||||||||| ||| |||||||||    
T  44539 ataattacactgaattatgtgattttctcaaatttttagcggtg 44582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 265 - 341
Target Start/End: Complemental strand, 46767 - 46690
Alignment:
Q  265 acggacactcctcagattaggcgtgtccgacaccaacacat--aattacactgaattatgtgattttctcatattatta 341  Q
    ||||||||||||| ||||||||||||| |||||| |||  |  |||||||||||||||||||||||| ||| |||||||    
T  46767 acggacactcctcggattaggcgtgtc-gacaccgacatttgtaattacactgaattatgtgattttttcaaattatta 46690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 304 - 346
Target Start/End: Complemental strand, 53225 - 53183
Alignment:
Q  304 ataattacactgaattatgtgattttctcatattattagcggt 346  Q
    |||||||||||||||||||||||||||||| |||||| |||||    
T  53225 ataattacactgaattatgtgattttctcaaattattggcggt 53183  T

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Target: scaffold0004 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 305 - 347
Target Start/End: Complemental strand, 92851 - 92809
Alignment:
Q  305 taattacactgaattatgtgattttctcatattattagcggtg 347  Q
    ||||||||||||||||||| ||||||||| |||||||||||||    
T  92851 taattacactgaattatgtaattttctcaaattattagcggtg 92809  T

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Target: scaffold0020 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 304 - 343
Target Start/End: Original strand, 135326 - 135365
Alignment:
Q  304 ataattacactgaattatgtgattttctcatattattagc 343  Q
    |||||||||| ||||||||||||||||||| |||||||||    
T  135326 ataattacacagaattatgtgattttctcaaattattagc 135365  T

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Target: scaffold0008 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 304 - 343
Target Start/End: Original strand, 263386 - 263425
Alignment:
Q  304 ataattacactgaattatgtgattttctcatattattagc 343  Q
    ||||||||||||||||||||| |||||||| |||||||||    
T  263386 ataattacactgaattatgtggttttctcaaattattagc 263425  T

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Target: scaffold0223 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 305 - 343
Target Start/End: Complemental strand, 20216 - 20178
Alignment:
Q  305 taattacactgaattatgtgattttctcatattattagc 343  Q
    ||||||||||||||||||||||||| ||| |||||||||    
T  20216 taattacactgaattatgtgattttttcaaattattagc 20178  T

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Target: scaffold0103 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 305 - 343
Target Start/End: Complemental strand, 51855 - 51817
Alignment:
Q  305 taattacactgaattatgtgattttctcatattattagc 343  Q
    ||||||||||||||||||||||||| ||| |||||||||    
T  51855 taattacactgaattatgtgattttttcaaattattagc 51817  T

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Target: scaffold0050 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 341
Target Start/End: Complemental strand, 70343 - 70286
Alignment:
Q  286 cgtgtccgacaccaacac--ataattacactgaattatgtgattttctcatattatta 341  Q
    ||||||||||||| ||||  |||||||||||||||||||| ||||| ||| |||||||    
T  70343 cgtgtccgacaccgacacttataattacactgaattatgttattttttcaaattatta 70286  T

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Target: scaffold0049 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 305 - 347
Target Start/End: Complemental strand, 63817 - 63775
Alignment:
Q  305 taattacactgaattatgtgattttctcatattattagcggtg 347  Q
    ||||| ||||||||||||| ||||||||| |||||||||||||    
T  63817 taattgcactgaattatgtaattttctcaaattattagcggtg 63775  T

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Target: scaffold0036 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 304 - 342
Target Start/End: Original strand, 9761 - 9799
Alignment:
Q  304 ataattacactgaattatgtgattttctcatattattag 342  Q
    ||||||||||||||||| |||||||||||| ||||||||    
T  9761 ataattacactgaattaagtgattttctcaaattattag 9799  T

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Target: scaffold0361 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 342
Target Start/End: Complemental strand, 14574 - 14537
Alignment:
Q  305 taattacactgaattatgtgattttctcatattattag 342  Q
    ||||||||||||||||||||||||| ||| ||||||||    
T  14574 taattacactgaattatgtgattttttcaaattattag 14537  T

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Target: scaffold0306 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 342
Target Start/End: Complemental strand, 13444 - 13407
Alignment:
Q  305 taattacactgaattatgtgattttctcatattattag 342  Q
    ||||| ||||||||||||||||||||||| ||||||||    
T  13444 taattgcactgaattatgtgattttctcaaattattag 13407  T

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Target: scaffold0152 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 342
Target Start/End: Original strand, 21883 - 21920
Alignment:
Q  305 taattacactgaattatgtgattttctcatattattag 342  Q
    ||||| ||||||||||||||||||||||| ||||||||    
T  21883 taattgcactgaattatgtgattttctcaaattattag 21920  T

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Target: scaffold0022 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 304 - 341
Target Start/End: Complemental strand, 90888 - 90851
Alignment:
Q  304 ataattacactgaattatgtgattttctcatattatta 341  Q
    |||||||||||||||||| ||||||||||| |||||||    
T  90888 ataattacactgaattatatgattttctcaaattatta 90851  T

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Target: scaffold0652 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 343
Target Start/End: Original strand, 456 - 515
Alignment:
Q  286 cgtgtccgacaccaacacat--aattacactgaattatgtgattttctcatattattagc 343  Q
    ||||||||||||| |||| |  |||||||||||||| ||||||||| ||| |||||||||    
T  456 cgtgtccgacaccgacacttgtaattacactgaattttgtgattttttcaaattattagc 515  T

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Target: scaffold0230 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 322
Target Start/End: Original strand, 6107 - 6143
Alignment:
Q  286 cgtgtccgacaccaacacataattacactgaattatg 322  Q
    ||||||| |||||||||||||||||||||||| ||||    
T  6107 cgtgtccaacaccaacacataattacactgaactatg 6143  T

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