View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20414_low_7 (Length: 249)

Name: NF20414_low_7
Description: NF20414
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20414_low_7
NF20414_low_7
[»] chr7 (42 HSPs)
chr7 (1-235)||(22073187-22073419)
chr7 (6-208)||(16219358-16219561)
chr7 (6-159)||(16056604-16056757)
chr7 (28-235)||(12255409-12255614)
chr7 (28-212)||(2279756-2279941)
chr7 (10-208)||(47832088-47832287)
chr7 (6-199)||(9389346-9389541)
chr7 (1-208)||(16324277-16324485)
chr7 (6-188)||(44014449-44014633)
chr7 (1-181)||(68016-68198)
chr7 (42-190)||(21064822-21064971)
chr7 (44-189)||(810790-810936)
chr7 (32-189)||(12756378-12756535)
chr7 (46-189)||(18005963-18006101)
chr7 (44-196)||(15143691-15143844)
chr7 (29-159)||(44116804-44116933)
chr7 (28-189)||(17061621-17061783)
chr7 (38-189)||(38227788-38227940)
chr7 (95-212)||(2529615-2529733)
chr7 (119-196)||(28504955-28505033)
chr7 (93-186)||(14045187-14045281)
chr7 (93-186)||(14355217-14355311)
chr7 (37-189)||(9509495-9509649)
chr7 (115-196)||(16385912-16385994)
chr7 (115-196)||(40443762-40443844)
chr7 (116-196)||(15754541-15754622)
chr7 (93-176)||(12901768-12901852)
chr7 (93-186)||(14036637-14036731)
chr7 (93-186)||(14346667-14346761)
chr7 (94-186)||(1867650-1867743)
chr7 (115-196)||(27847498-27847580)
chr7 (116-188)||(3564026-3564099)
chr7 (37-86)||(26212302-26212351)
chr7 (45-137)||(35366540-35366631)
chr7 (45-84)||(9177431-9177470)
chr7 (116-189)||(12699218-12699292)
chr7 (35-85)||(15008263-15008313)
chr7 (10-83)||(12901609-12901682)
chr7 (96-176)||(15008118-15008199)
chr7 (37-86)||(40443695-40443744)
chr7 (141-196)||(11995712-11995768)
chr7 (96-201)||(17017040-17017146)
[»] scaffold0034 (2 HSPs)
scaffold0034 (6-235)||(32812-33039)
scaffold0034 (116-189)||(51545-51619)
[»] scaffold0556 (2 HSPs)
scaffold0556 (16-235)||(8302-8519)
scaffold0556 (1-189)||(7081-7271)
[»] chr6 (38 HSPs)
chr6 (6-235)||(23019683-23019910)
chr6 (15-208)||(25644607-25644801)
chr6 (1-208)||(27332926-27333134)
chr6 (1-208)||(27393666-27393874)
chr6 (45-196)||(22080391-22080543)
chr6 (48-199)||(25956272-25956424)
chr6 (1-189)||(4667874-4668063)
chr6 (6-181)||(19652470-19652647)
chr6 (1-189)||(4185484-4185673)
chr6 (1-189)||(4674721-4674910)
chr6 (29-189)||(18457014-18457174)
chr6 (6-189)||(4189232-4189416)
chr6 (44-189)||(29808544-29808691)
chr6 (94-212)||(9098087-9098206)
chr6 (44-189)||(28496134-28496280)
chr6 (115-189)||(20360632-20360707)
chr6 (37-189)||(29060847-29061000)
chr6 (37-189)||(19303202-19303355)
chr6 (115-196)||(20637948-20638030)
chr6 (116-196)||(1561689-1561770)
chr6 (93-212)||(20109578-20109698)
chr6 (10-85)||(19668653-19668728)
chr6 (37-156)||(25629050-25629169)
chr6 (115-196)||(18821484-18821566)
chr6 (116-189)||(22779888-22779962)
chr6 (115-196)||(16920298-16920380)
chr6 (45-83)||(17106048-17106086)
chr6 (116-189)||(18409488-18409562)
chr6 (8-86)||(31155163-31155241)
chr6 (37-86)||(11185808-11185857)
chr6 (37-86)||(16920399-16920448)
chr6 (50-83)||(18177438-18177471)
chr6 (50-83)||(18204400-18204433)
chr6 (45-86)||(18821585-18821626)
chr6 (37-86)||(20360726-20360775)
chr6 (45-157)||(16830111-16830223)
chr6 (95-159)||(19023814-19023878)
chr6 (94-199)||(19668812-19668918)
[»] scaffold0078 (1 HSPs)
scaffold0078 (6-212)||(10804-11011)
[»] chr5 (29 HSPs)
chr5 (10-235)||(26011652-26011875)
chr5 (28-235)||(22144348-22144553)
chr5 (6-208)||(21329137-21329341)
chr5 (6-212)||(5888813-5889021)
chr5 (6-212)||(21741181-21741389)
chr5 (1-189)||(22959194-22959384)
chr5 (28-189)||(21565842-21566004)
chr5 (83-208)||(21498659-21498785)
chr5 (28-189)||(11580906-11581068)
chr5 (5-88)||(21501917-21501999)
chr5 (28-196)||(1096765-1096934)
chr5 (37-189)||(21985808-21985961)
chr5 (1-196)||(21871225-21871421)
chr5 (1-196)||(21875505-21875701)
chr5 (28-199)||(36154479-36154651)
chr5 (39-189)||(23390157-23390309)
chr5 (28-189)||(19669197-19669360)
chr5 (95-212)||(20026501-20026619)
chr5 (93-201)||(22177792-22177901)
chr5 (115-196)||(21292635-21292717)
chr5 (37-189)||(24529527-24529681)
chr5 (116-196)||(19660491-19660572)
chr5 (116-179)||(9078338-9078402)
chr5 (45-83)||(25744036-25744074)
chr5 (37-86)||(9078259-9078308)
chr5 (37-86)||(21292736-21292785)
chr5 (37-86)||(22075325-22075374)
chr5 (116-196)||(22119847-22119928)
chr5 (36-84)||(20469654-20469702)
[»] scaffold0507 (1 HSPs)
scaffold0507 (6-212)||(7695-7902)
[»] chr3 (48 HSPs)
chr3 (32-212)||(2050839-2051018)
chr3 (28-235)||(52523345-52523550)
chr3 (10-200)||(324515-324706)
chr3 (10-208)||(14234770-14234969)
chr3 (6-196)||(15471200-15471391)
chr3 (12-212)||(1465047-1465249)
chr3 (28-189)||(17247947-17248109)
chr3 (29-212)||(42386710-42386894)
chr3 (29-189)||(53070360-53070520)
chr3 (44-189)||(12933971-12934117)
chr3 (6-181)||(16097605-16097782)
chr3 (44-189)||(32307983-32308128)
chr3 (93-200)||(605941-606049)
chr3 (37-179)||(40213392-40213535)
chr3 (12-85)||(37250932-37251005)
chr3 (44-179)||(49667754-49667890)
chr3 (49-189)||(9513228-9513370)
chr3 (49-189)||(9521203-9521345)
chr3 (15-178)||(14572873-14573037)
chr3 (95-201)||(23275106-23275213)
chr3 (95-209)||(23412814-23412929)
chr3 (37-189)||(25476046-25476199)
chr3 (93-201)||(43927543-43927652)
chr3 (117-189)||(49389305-49389378)
chr3 (44-181)||(1644352-1644489)
chr3 (95-207)||(14501564-14501677)
chr3 (45-189)||(11424424-11424569)
chr3 (1-86)||(12171869-12171955)
chr3 (116-196)||(14179708-14179789)
chr3 (93-190)||(12378359-12378457)
chr3 (95-207)||(45797608-45797721)
chr3 (116-189)||(18438920-18438994)
chr3 (115-196)||(20698101-20698183)
chr3 (37-189)||(26687193-26687347)
chr3 (37-189)||(14973161-14973314)
chr3 (94-159)||(37250804-37250869)
chr3 (118-189)||(16104168-16104240)
chr3 (116-178)||(14576505-14576568)
chr3 (116-178)||(17488243-17488306)
chr3 (116-178)||(17499725-17499788)
chr3 (93-199)||(22109926-22110033)
chr3 (45-83)||(606135-606173)
chr3 (116-196)||(12340138-12340219)
chr3 (45-82)||(13210096-13210133)
chr3 (37-86)||(20698202-20698251)
chr3 (116-179)||(13442660-13442724)
chr3 (45-85)||(22110116-22110156)
chr3 (37-81)||(23083132-23083176)
[»] scaffold0333 (2 HSPs)
scaffold0333 (6-208)||(6888-7092)
scaffold0333 (6-208)||(14268-14472)
[»] scaffold0138 (1 HSPs)
scaffold0138 (10-196)||(13220-13407)
[»] chr4 (36 HSPs)
chr4 (6-212)||(15099625-15099833)
chr4 (6-208)||(39705930-39706133)
chr4 (6-199)||(15190592-15190787)
chr4 (28-235)||(52242811-52243016)
chr4 (28-212)||(15464567-15464752)
chr4 (59-212)||(43198226-43198380)
chr4 (45-199)||(13844854-13845009)
chr4 (6-188)||(8846649-8846834)
chr4 (28-181)||(44928592-44928746)
chr4 (95-212)||(15868273-15868391)
chr4 (44-189)||(12774313-12774458)
chr4 (29-189)||(21814964-21815124)
chr4 (29-189)||(21815293-21815453)
chr4 (29-189)||(21818386-21818546)
chr4 (95-207)||(32851816-32851929)
chr4 (93-208)||(13415-13532)
chr4 (116-190)||(16597031-16597106)
chr4 (115-190)||(3097017-3097093)
chr4 (37-159)||(15091203-15091326)
chr4 (93-159)||(12287825-12287891)
chr4 (37-189)||(14038955-14039109)
chr4 (28-86)||(44102508-44102566)
chr4 (94-159)||(53081789-53081854)
chr4 (44-84)||(13616-13656)
chr4 (115-178)||(12903131-12903195)
chr4 (115-196)||(14052967-14053049)
chr4 (39-86)||(7089185-7089232)
chr4 (116-189)||(16239653-16239728)
chr4 (39-86)||(17047838-17047885)
chr4 (116-189)||(6190819-6190893)
chr4 (115-176)||(7089251-7089313)
chr4 (37-86)||(3096949-3096998)
chr4 (37-86)||(7799003-7799052)
chr4 (37-86)||(12903063-12903112)
chr4 (116-196)||(15552199-15552280)
chr4 (116-196)||(24029127-24029208)
[»] scaffold0116 (2 HSPs)
scaffold0116 (45-196)||(43438-43590)
scaffold0116 (45-196)||(47358-47510)
[»] scaffold0020 (1 HSPs)
scaffold0020 (28-199)||(15481-15653)
[»] chr8 (38 HSPs)
chr8 (6-212)||(39834107-39834315)
chr8 (6-208)||(6520644-6520847)
chr8 (12-208)||(38854893-38855090)
chr8 (6-121)||(21285874-21285989)
chr8 (6-181)||(21673980-21674157)
chr8 (44-176)||(19801101-19801234)
chr8 (6-181)||(23760509-23760685)
chr8 (28-189)||(41598482-41598644)
chr8 (6-181)||(26355367-26355544)
chr8 (95-202)||(13507657-13507765)
chr8 (95-202)||(13597189-13597297)
chr8 (94-212)||(20499024-20499143)
chr8 (37-159)||(22875372-22875494)
chr8 (37-196)||(20536514-20536675)
chr8 (120-199)||(21491382-21491462)
chr8 (15-189)||(23406665-23406841)
chr8 (119-196)||(5865931-5866009)
chr8 (37-189)||(6759563-6759717)
chr8 (119-196)||(17141302-17141380)
chr8 (115-190)||(45130691-45130767)
chr8 (93-201)||(17266565-17266674)
chr8 (116-189)||(18878898-18878972)
chr8 (93-201)||(982975-983084)
chr8 (93-179)||(17439100-17439187)
chr8 (164-235)||(21286656-21286724)
chr8 (116-196)||(21918664-21918745)
chr8 (93-179)||(24353463-24353550)
chr8 (29-190)||(21414887-21415049)
chr8 (116-189)||(7373135-7373209)
chr8 (116-189)||(18818071-18818145)
chr8 (44-86)||(21918766-21918808)
chr8 (120-189)||(22627125-22627195)
chr8 (115-196)||(31971629-31971711)
chr8 (37-86)||(18818175-18818224)
chr8 (116-196)||(21255605-21255686)
chr8 (93-179)||(37116787-37116874)
chr8 (115-159)||(25362843-25362887)
chr8 (45-85)||(37116664-37116704)
[»] chr2 (25 HSPs)
chr2 (28-212)||(23708257-23708441)
chr2 (28-196)||(25176140-25176309)
chr2 (15-199)||(23076726-23076910)
chr2 (15-189)||(23660307-23660482)
chr2 (37-189)||(298476-298629)
chr2 (10-85)||(23207559-23207634)
chr2 (48-179)||(28406297-28406429)
chr2 (119-196)||(23071617-23071695)
chr2 (93-212)||(18786446-18786566)
chr2 (37-159)||(22337422-22337544)
chr2 (120-189)||(22133878-22133948)
chr2 (93-176)||(22412733-22412817)
chr2 (116-189)||(22730894-22730968)
chr2 (120-189)||(22737841-22737911)
chr2 (115-196)||(23654064-23654146)
chr2 (32-85)||(22412900-22412953)
chr2 (93-176)||(23207717-23207801)
chr2 (115-196)||(23286235-23286317)
chr2 (116-189)||(27753961-27754035)
chr2 (37-189)||(32451590-32451744)
chr2 (115-190)||(37787-37863)
chr2 (28-85)||(20519957-20520014)
chr2 (115-159)||(20309479-20309523)
chr2 (93-176)||(20519790-20519874)
chr2 (45-81)||(31756232-31756268)
[»] scaffold0010 (3 HSPs)
scaffold0010 (6-181)||(130182-130359)
scaffold0010 (28-85)||(60479-60536)
scaffold0010 (93-176)||(60312-60396)
[»] scaffold0810 (1 HSPs)
scaffold0810 (6-189)||(3207-3392)
[»] chr1 (39 HSPs)
chr1 (6-212)||(28194086-28194294)
chr1 (6-196)||(22921521-22921713)
chr1 (6-189)||(52927642-52927826)
chr1 (6-189)||(33681284-33681469)
chr1 (6-212)||(35981325-35981532)
chr1 (6-159)||(20637125-20637279)
chr1 (82-199)||(43697712-43697830)
chr1 (1-186)||(20248547-20248734)
chr1 (6-189)||(22237905-22238089)
chr1 (35-189)||(433312-433467)
chr1 (44-189)||(21754350-21754495)
chr1 (37-178)||(50209885-50210027)
chr1 (95-212)||(21861132-21861250)
chr1 (28-85)||(26065238-26065295)
chr1 (37-188)||(34510087-34510239)
chr1 (95-212)||(21895870-21895989)
chr1 (95-212)||(16759091-16759209)
chr1 (115-196)||(22355839-22355921)
chr1 (115-196)||(22357525-22357607)
chr1 (95-212)||(21342513-21342631)
chr1 (95-212)||(21347378-21347496)
chr1 (38-189)||(22532577-22532729)
chr1 (93-176)||(26065357-26065441)
chr1 (115-196)||(27250394-27250476)
chr1 (32-78)||(35260852-35260898)
chr1 (6-79)||(49261616-49261690)
chr1 (93-159)||(50687031-50687097)
chr1 (93-179)||(16367881-16367968)
chr1 (119-179)||(20918990-20919051)
chr1 (28-84)||(16758949-16759005)
chr1 (93-176)||(35260729-35260813)
chr1 (115-189)||(20846891-20846966)
chr1 (93-199)||(41049619-41049726)
chr1 (115-196)||(38801056-38801138)
chr1 (44-86)||(38801157-38801199)
chr1 (47-84)||(21861335-21861372)
chr1 (37-86)||(22354338-22354387)
chr1 (95-159)||(16093508-16093572)
chr1 (45-157)||(24087730-24087842)
[»] scaffold0243 (1 HSPs)
scaffold0243 (6-212)||(5760-5967)
[»] scaffold0530 (1 HSPs)
scaffold0530 (6-212)||(666-879)
[»] scaffold1984 (1 HSPs)
scaffold1984 (6-189)||(405-590)
[»] scaffold0102 (1 HSPs)
scaffold0102 (1-189)||(19536-19726)
[»] scaffold0207 (1 HSPs)
scaffold0207 (6-181)||(2313-2489)
[»] scaffold0475 (1 HSPs)
scaffold0475 (1-189)||(9347-9536)
[»] scaffold0012 (2 HSPs)
scaffold0012 (87-179)||(227849-227942)
scaffold0012 (28-92)||(225705-225769)
[»] scaffold0320 (1 HSPs)
scaffold0320 (63-212)||(12329-12478)
[»] scaffold0125 (1 HSPs)
scaffold0125 (6-189)||(45450-45636)
[»] scaffold0839 (1 HSPs)
scaffold0839 (28-179)||(1748-1900)
[»] scaffold0621 (2 HSPs)
scaffold0621 (6-179)||(6811-6987)
scaffold0621 (44-84)||(8784-8824)
[»] scaffold0228 (3 HSPs)
scaffold0228 (37-189)||(4814-4968)
scaffold0228 (37-189)||(12396-12550)
scaffold0228 (37-189)||(22348-22502)
[»] scaffold0028 (1 HSPs)
scaffold0028 (44-189)||(132967-133113)
[»] scaffold0023 (2 HSPs)
scaffold0023 (6-159)||(39864-40018)
scaffold0023 (117-189)||(101781-101854)
[»] scaffold0001 (1 HSPs)
scaffold0001 (10-189)||(160964-161145)
[»] scaffold0503 (1 HSPs)
scaffold0503 (29-189)||(12228-12388)
[»] scaffold0555 (2 HSPs)
scaffold0555 (6-108)||(10283-10385)
scaffold0555 (130-190)||(10228-10289)
[»] scaffold0150 (1 HSPs)
scaffold0150 (44-189)||(32397-32543)
[»] scaffold0165 (4 HSPs)
scaffold0165 (93-211)||(27281-27400)
scaffold0165 (43-84)||(27485-27526)
scaffold0165 (115-196)||(3855-3937)
scaffold0165 (115-196)||(7919-8001)
[»] scaffold0142 (1 HSPs)
scaffold0142 (28-189)||(17078-17240)
[»] scaffold0076 (1 HSPs)
scaffold0076 (93-201)||(24169-24279)
[»] scaffold0031 (1 HSPs)
scaffold0031 (29-189)||(20087-20247)
[»] scaffold0122 (1 HSPs)
scaffold0122 (37-189)||(25726-25879)
[»] scaffold0021 (6 HSPs)
scaffold0021 (82-189)||(62913-63021)
scaffold0021 (10-85)||(136132-136207)
scaffold0021 (10-85)||(144840-144915)
scaffold0021 (93-199)||(135942-136049)
scaffold0021 (93-199)||(144650-144757)
scaffold0021 (37-86)||(124891-124940)
[»] scaffold0016 (2 HSPs)
scaffold0016 (39-189)||(2159-2311)
scaffold0016 (122-201)||(119200-119280)
[»] scaffold0278 (1 HSPs)
scaffold0278 (103-189)||(5966-6053)
[»] scaffold0218 (2 HSPs)
scaffold0218 (6-85)||(7841-7920)
scaffold0218 (120-195)||(28935-29011)
[»] scaffold0211 (1 HSPs)
scaffold0211 (44-189)||(28470-28616)
[»] scaffold0056 (3 HSPs)
scaffold0056 (37-189)||(16876-17029)
scaffold0056 (117-196)||(79016-79096)
scaffold0056 (29-73)||(79107-79151)
[»] scaffold0413 (2 HSPs)
scaffold0413 (44-189)||(15276-15422)
scaffold0413 (93-209)||(13007-13124)
[»] scaffold0292 (2 HSPs)
scaffold0292 (37-189)||(649-802)
scaffold0292 (38-179)||(3777-3920)
[»] scaffold0235 (2 HSPs)
scaffold0235 (95-209)||(14004-14119)
scaffold0235 (115-196)||(11178-11260)
[»] scaffold0217 (1 HSPs)
scaffold0217 (38-189)||(16260-16413)
[»] scaffold0145 (1 HSPs)
scaffold0145 (37-189)||(39067-39219)
[»] scaffold0075 (3 HSPs)
scaffold0075 (93-208)||(53113-53230)
scaffold0075 (44-84)||(53314-53354)
scaffold0075 (116-196)||(7948-8029)
[»] scaffold0357 (3 HSPs)
scaffold0357 (28-83)||(15866-15921)
scaffold0357 (93-159)||(13570-13636)
scaffold0357 (93-190)||(3133-3231)
[»] scaffold0080 (2 HSPs)
scaffold0080 (10-85)||(19649-19724)
scaffold0080 (16-86)||(40198-40268)
[»] scaffold0040 (2 HSPs)
scaffold0040 (93-199)||(103234-103341)
scaffold0040 (10-85)||(103403-103478)
[»] scaffold0022 (2 HSPs)
scaffold0022 (93-179)||(80701-80788)
scaffold0022 (45-85)||(128735-128775)
[»] scaffold0628 (1 HSPs)
scaffold0628 (44-189)||(2464-2609)
[»] scaffold0627 (1 HSPs)
scaffold0627 (37-181)||(211-356)
[»] scaffold0175 (2 HSPs)
scaffold0175 (119-196)||(34509-34587)
scaffold0175 (37-86)||(13398-13447)
[»] scaffold0161 (1 HSPs)
scaffold0161 (119-196)||(2099-2177)
[»] scaffold0011 (3 HSPs)
scaffold0011 (37-189)||(52218-52372)
scaffold0011 (120-196)||(167644-167721)
scaffold0011 (37-86)||(167745-167794)
[»] scaffold0876 (1 HSPs)
scaffold0876 (116-196)||(2739-2820)
[»] scaffold0395 (2 HSPs)
scaffold0395 (45-158)||(8185-8298)
scaffold0395 (118-189)||(623-695)
[»] scaffold0130 (2 HSPs)
scaffold0130 (93-209)||(1344-1461)
scaffold0130 (118-189)||(28924-28996)
[»] scaffold0120 (3 HSPs)
scaffold0120 (38-190)||(32619-32772)
scaffold0120 (38-190)||(46233-46386)
scaffold0120 (116-179)||(16473-16537)
[»] scaffold0647 (1 HSPs)
scaffold0647 (118-189)||(5782-5854)
[»] scaffold0601 (1 HSPs)
scaffold0601 (95-212)||(7095-7213)
[»] scaffold0598 (2 HSPs)
scaffold0598 (115-196)||(717-799)
scaffold0598 (37-86)||(818-867)
[»] scaffold0456 (1 HSPs)
scaffold0456 (115-190)||(10097-10173)
[»] scaffold0100 (1 HSPs)
scaffold0100 (43-189)||(20425-20572)
[»] scaffold0305 (1 HSPs)
scaffold0305 (45-189)||(20717-20863)
[»] scaffold0123 (1 HSPs)
scaffold0123 (93-179)||(25545-25632)
[»] scaffold0718 (1 HSPs)
scaffold0718 (115-196)||(4796-4878)
[»] scaffold0427 (1 HSPs)
scaffold0427 (115-196)||(13869-13951)
[»] scaffold0358 (4 HSPs)
scaffold0358 (115-196)||(310-392)
scaffold0358 (115-196)||(5086-5168)
scaffold0358 (38-86)||(243-291)
scaffold0358 (38-86)||(5019-5067)
[»] scaffold0352 (1 HSPs)
scaffold0352 (117-190)||(17668-17742)
[»] scaffold0266 (1 HSPs)
scaffold0266 (116-189)||(18619-18693)
[»] scaffold0098 (1 HSPs)
scaffold0098 (118-207)||(29149-29239)
[»] scaffold1842 (2 HSPs)
scaffold1842 (120-196)||(714-791)
scaffold1842 (37-86)||(815-864)
[»] scaffold0351 (1 HSPs)
scaffold0351 (119-199)||(16657-16738)
[»] scaffold0261 (2 HSPs)
scaffold0261 (119-189)||(16047-16118)
scaffold0261 (96-207)||(17909-18021)
[»] scaffold1419 (1 HSPs)
scaffold1419 (45-81)||(338-374)
[»] scaffold0121 (1 HSPs)
scaffold0121 (116-179)||(8203-8267)
[»] scaffold0114 (1 HSPs)
scaffold0114 (114-199)||(15127-15213)
[»] scaffold0737 (1 HSPs)
scaffold0737 (14-85)||(1562-1633)
[»] scaffold0540 (1 HSPs)
scaffold0540 (37-179)||(684-827)
[»] scaffold0109 (1 HSPs)
scaffold0109 (96-212)||(35508-35625)
[»] scaffold0005 (1 HSPs)
scaffold0005 (96-159)||(268094-268157)
[»] scaffold1137 (1 HSPs)
scaffold1137 (44-189)||(1962-2108)
[»] scaffold0484 (1 HSPs)
scaffold0484 (115-196)||(1288-1370)
[»] scaffold0403 (1 HSPs)
scaffold0403 (115-196)||(5222-5304)
[»] scaffold0389 (1 HSPs)
scaffold0389 (119-196)||(13262-13340)
[»] scaffold0113 (1 HSPs)
scaffold0113 (115-196)||(32438-32520)
[»] scaffold0088 (1 HSPs)
scaffold0088 (115-196)||(21275-21357)
[»] scaffold0026 (2 HSPs)
scaffold0026 (116-189)||(39592-39666)
scaffold0026 (116-179)||(40242-40306)
[»] scaffold0141 (1 HSPs)
scaffold0141 (37-86)||(39783-39832)
[»] scaffold0049 (1 HSPs)
scaffold0049 (37-86)||(74980-75029)
[»] scaffold0309 (1 HSPs)
scaffold0309 (38-86)||(6917-6965)
[»] scaffold0064 (1 HSPs)
scaffold0064 (115-196)||(47360-47442)
[»] scaffold0042 (1 HSPs)
scaffold0042 (116-179)||(23973-24037)
[»] scaffold0032 (1 HSPs)
scaffold0032 (115-178)||(51953-52017)


Alignment Details
Target: chr7 (Bit Score: 194; Significance: 1e-105; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 22073187 - 22073419
Alignment:
Q  1 caagtatcgcatttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaa 100  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  22073187 caaggatcgcatttaacctaacaaagcattctgtaactgggtaactcgcgaggcgagggcctctactcgccatggcgagttcaggtgtaactcccaaaaa 22073286  T
Q  101 tccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaacttaa 199  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||    
T  22073287 tccattcttaaactattctaggttcaatctcattctagaatcttttctaatcattattacacatgttcaggcactcaaaaacctctaaggtccaacttaa 22073386  T
Q  200 ggggcaaaactactacgaaaccatgtcgactctctg 235  Q
    ||||||||   |||||||||||||||||||||||||    
T  22073387 ggggcaaa---actacgaaaccatgtcgactctctg 22073419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 6 - 208
Target Start/End: Complemental strand, 16219561 - 16219358
Alignment:
Q  6 atcgcatttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccat 105  Q
    ||||||||||||||||||| | ||||||||||| |  |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| |||    
T  16219561 atcgcatttaacctaacaaggcattctgtaactagacaactcgcgaggcgagggcctctactcgccatggcgagttcacgtgtaactcccaaaaattcat 16219462  T
Q  106 tcttaaactattccaggttcaatctcattctagaatcttttctaatcattattaca-tagttcaggcactcaaaaacctctaaggtccaacttaaggggc 204  Q
    ||||||||||||||||||||||||||| |||| ||||||| ||||||||||||| |  |||| || ||||||||||| |||||||| |||||||| || |    
T  16219461 tcttaaactattccaggttcaatctcaatctaaaatctttcctaatcattattatacaagtttagacactcaaaaacatctaaggttcaacttaaaggtc 16219362  T
Q  205 aaaa 208  Q
    ||||    
T  16219361 aaaa 16219358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 6 - 159
Target Start/End: Original strand, 16056604 - 16056757
Alignment:
Q  6 atcgcatttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccat 105  Q
    ||||||||||||||||||| | |||||||||||||||||||||||||||||  |||||||||||| ||||||||||||||||||| ||||||||||||||    
T  16056604 atcgcatttaacctaacaaggcattctgtaactgggtaactcgcgaggcgagagcctctactcgctatggcgagttcaggtgtaattcccaaaaatccat 16056703  T
Q  106 tcttaaactattccaggttcaatctcattctagaatcttttctaatcattatta 159  Q
    ||||||||||||||||||||||||||| |||| ||||||| ||| |||||||||    
T  16056704 tcttaaactattccaggttcaatctcaatctaaaatctttcctattcattatta 16056757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 28 - 235
Target Start/End: Complemental strand, 12255614 - 12255409
Alignment:
Q  28 attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaa 127  Q
    |||||||||||||| ||||||||||||||  |||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  12255614 attctgtaactgggaaactcgcgaggcgagagcctctactcgctatggcgagttcaggtgtaactcccaaaaattcattcttaaactattccaggttcaa 12255515  T
Q  128 tctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaacttaaggggcaaaactactacgaaaccatgtc 226  Q
    ||||| |||||||||||| ||||||||||||| | | ||||| |||||||||| | |||||   |||||||||||  ||||   ||||||||| |||||     
T  12255514 tctcaatctagaatctttcctaatcattattatacatgttcaagcactcaaaatcatctaaataccaacttaaggatcaaa---actacgaaatcatgtt 12255418  T
Q  227 gactctctg 235  Q
    |||||||||    
T  12255417 gactctctg 12255409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 28 - 212
Target Start/End: Complemental strand, 2279941 - 2279756
Alignment:
Q  28 attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaa 127  Q
    ||||| ||||| || |||||||||||||| ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  2279941 attctataactaggcaactcgcgaggcgagggcctctactcgctatggcgagttcaggtgtaacacccaaaaatccattcttaaactattacaggttcaa 2279842  T
Q  128 tctcattctagaatcttttctaatcattatta--catagttcaggcactcaaaaacctctaaggtccaacttaaggggcaaaactac 212  Q
    ||||| |||| ||||||| |||||||||||||  ||| |||||||||||||||| | |||||    ||||||||||  |||||||||    
T  2279841 tctcaatctaaaatctttcctaatcattattatgcat-gttcaggcactcaaaatcatctaaatatcaacttaaggatcaaaactac 2279756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 10 - 208
Target Start/End: Original strand, 47832088 - 47832287
Alignment:
Q  10 catttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattct 108  Q
    |||||||||||| ||||| |||||||||||||| |  ||||||||||| |||||||||||||||||||||||||| ||||||||| | ||||| | ||||    
T  47832088 catttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcatgtgtaactctc-aaaattcgttct 47832186  T
Q  109 taaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaacttaaggggcaaa 207  Q
    ||||||||||||| |||||||| | |||  ||||||| ||||||||||||| | | |||||||||||||||||| |||||||| |||||||| || ||||    
T  47832187 taaactattccagattcaatcttaatctccaatctttcctaatcattattagacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 47832286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 6 - 199
Target Start/End: Complemental strand, 9389541 - 9389346
Alignment:
Q  6 atcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatcca 104  Q
    ||||| |||||||||| ||| | ||||||||||||  || ||||||||||||  |||||||||||||||||||||||||| |||||||| || |||| |     
T  9389541 atcgcttttaacctaaacaaggcattctgtaactgcttagctcgcgaggcgagagcctctactcgccatggcgagttcagctgtaactcacataaattcg 9389442  T
Q  105 ttcttaaactattccaggttcaatctcattctagaatcttttctaatcattattaca-tagttcaggcactcaaaaacctctaaggtccaacttaa 199  Q
    |||||||||||||||||||||||||||| |||| ||||||| |||||||| |||| |  ||| ||| ||||||||||| || ||||| ||||||||    
T  9389441 ttcttaaactattccaggttcaatctcaatctacaatctttcctaatcatcattatacaagtccagacactcaaaaacatccaaggttcaacttaa 9389346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 16324277 - 16324485
Alignment:
Q  1 caagtatcgcatttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaa 100  Q
    |||| ||| ||||||||||||||| | |||||||||||||| |  |||| |||||| |||||||||||||||||||||||||   | |||||| ||||||    
T  16324277 caaggatcacatttaacctaacaaggcattctgtaactgggcagttcgcaaggcgagggcctctactcgccatggcgagttccaatctaactctcaaaaa 16324376  T
Q  101 tccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaacttaa 199  Q
    | | ||||||||||||||||||||||||||||  ||  ||||||| ||||||||||||| | | ||||| |||||||||||| |  ||||| ||||||||    
T  16324377 ttcgttcttaaactattccaggttcaatctcaaactccaatctttcctaatcattattagacatgttcaagcactcaaaaacattcaaggttcaacttaa 16324476  T
Q  200 ggggcaaaa 208  Q
     || |||||    
T  16324477 aggtcaaaa 16324485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 6 - 188
Target Start/End: Original strand, 44014449 - 44014633
Alignment:
Q  6 atcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatcca 104  Q
    |||||||||||||||| ||| | |||||||||| || || ||||||||||||  |||||||||| |||||||||||||||||| ||||  ||||||| ||    
T  44014449 atcgcatttaacctaaacaaggcattctgtaaccggttagctcgcgaggcgagagcctctactcaccatggcgagttcaggtgcaactaacaaaaattca 44014548  T
Q  105 ttcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaag 188  Q
    |||| |||   |||||||||||||||||||||  ||||||| ||||||||||||| | | |||||||||||||||||| ||||||    
T  44014549 ttctaaaatctttccaggttcaatctcattctccaatctttcctaatcattattagacatgttcaggcactcaaaaacatctaag 44014633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 181
Target Start/End: Original strand, 68016 - 68198
Alignment:
Q  1 caagtatcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaa 99  Q
    |||| |||||||||||||||| ||| | ||||||||||||| || ||||||||||||  |||||||||||||||||||||||||  ||||||||||| ||    
T  68016 caaggatcgcatttaacctaaacaaggcattctgtaactggttagctcgcgaggcgagagcctctactcgccatggcgagttcatctgtaactcccacaa 68115  T
Q  100 atccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattatt--acatagttcaggcactcaaaaac 181  Q
     |   |||||||| ||||||||||||||||||| |||  ||||||| ||||||||||||  ||||| ||||||||||| |||||    
T  68116 gtttgttcttaaattattccaggttcaatctcaatctccaatctttcctaatcattattagacata-ttcaggcactcgaaaac 68198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 42 - 190
Target Start/End: Complemental strand, 21064971 - 21064822
Alignment:
Q  42 taactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaat 141  Q
    |||||| ||||||||  ||||||||||||||||||||||| ||||  ||| | |||||||||||||| | ||||||||| |||||||||||||||| |||    
T  21064971 taactcacgaggcgagagcctctactcgccatggcgagttaaggtaaaacactcaaaaatccattctgacactattccaagttcaatctcattctaaaat 21064872  T
Q  142 cttttctaatcattat--tacatagttcaggcactcaaaaacctctaaggt 190  Q
     ||| |||||||||||  ||||| |||||||| |||| |||| ||||||||    
T  21064871 atttcctaatcattattgtacat-gttcaggccctcataaacatctaaggt 21064822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 44 - 189
Target Start/End: Complemental strand, 810936 - 810790
Alignment:
Q  44 actcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatct 143  Q
    |||||||||||||  ||||||||||||||||||||||||||||  |  || ||||||| |||||| ||    ||||||||||||||| |||||  |||||    
T  810936 actcgcgaggcgagagcctctactcgccatggcgagttcaggtacagttcacaaaaattcattctaaattctttccaggttcaatcttattctccaatct 810837  T
Q  144 tttctaatcattattacata-gttcaggcactcaaaaacctctaagg 189  Q
    || ||||||||||||| ||| |||||||||||||||||| |||||||    
T  810836 ttcctaatcattattagatatgttcaggcactcaaaaacatctaagg 810790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 32 - 189
Target Start/End: Complemental strand, 12756535 - 12756378
Alignment:
Q  32 tgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaa-tccattcttaaactattccaggttcaatct 130  Q
    ||||| |||| ||||||||||||||  ||||||||||||||||| ||||||||||  | || ||||||| | |||||||||| || ||||||||||||||    
T  12756535 tgtaattgggcaactcgcgaggcgagagcctctactcgccatggtgagttcaggt-cagcttccaaaaagttcattcttaaa-taatccaggttcaatct 12756438  T
Q  131 cattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 189  Q
    ||||||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  12756437 cattctacattctttcctaatcattattaaacatgttcaggcactcaaaagcatctaagg 12756378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 46 - 189
Target Start/End: Original strand, 18005963 - 18006101
Alignment:
Q  46 tcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttt 145  Q
    ||||||||||| |||||||| |||||||||||||||||||| ||||||||| || | | |||||||||||||  |||||||||||||      |||||||    
T  18005963 tcgcgaggcgagggcctctagtcgccatggcgagttcaggtataactcccacaagttcgttcttaaactattttaggttcaatctca------aatcttt 18006056  T
Q  146 tctaatcattattacata-gttcaggcactcaaaaacctctaagg 189  Q
      |||||||||||| | | |||||||||||||||||| |||||||    
T  18006057 cataatcattattagacatgttcaggcactcaaaaacatctaagg 18006101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 44 - 196
Target Start/End: Complemental strand, 15143844 - 15143691
Alignment:
Q  44 actcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatct 143  Q
    |||||||||||||  |||||| ||||||||||||||| |||||   | || ||||| | |||||| |||   |||||||||||||||||||||| |||||    
T  15143844 actcgcgaggcgagagcctctgctcgccatggcgagtacaggtcagaatcacaaaagttcattctaaaatctttccaggttcaatctcattctaaaatct 15143745  T
Q  144 tttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 196  Q
    || ||||||||||||| | | |||||||||||||||  | |||||||| |||||    
T  15143744 ttcctaatcattattagacatgttcaggcactcaaaggcatctaaggtacaact 15143691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 29 - 159
Target Start/End: Original strand, 44116804 - 44116933
Alignment:
Q  29 ttctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaat 128  Q
    ||||||||||| || |||||||||||||  |||||| |||||||||||||||||||||   | |||||||  | |||||| || || |||| ||||||||    
T  44116804 ttctgtaactgagtcactcgcgaggcgagagcctctgctcgccatggcgagttcaggtcagattcccaaagtttcattctaaatct-ttccgggttcaat 44116902  T
Q  129 ctcattctagaatcttttctaatcattatta 159  Q
    ||||||||| | ||||| |||||||||||||    
T  44116903 ctcattctacattctttcctaatcattatta 44116933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 28 - 189
Target Start/End: Complemental strand, 17061783 - 17061621
Alignment:
Q  28 attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaa-ctattccaggttca 126  Q
    ||||||||| | ||| |||||||||||||  ||||||||||||||| ||||||||||||   | || ||||  |  ||||| ||| |||| |||||||||    
T  17061783 attctgtaaataggtcactcgcgaggcgagagcctctactcgccatcgcgagttcaggtcagattctcaaagttttattctaaaatctat-ccaggttca 17061685  T
Q  127 atctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 189  Q
    ||||||||||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  17061684 atctcattctacattctttcctaatcattattaaacatgttcaggcactcaaaagcatctaagg 17061621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 38 - 189
Target Start/End: Original strand, 38227788 - 38227940
Alignment:
Q  38 tgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatc-cattcttaaactattccaggttcaatctcattct 136  Q
    ||||| |||||||||||||  |||||| |||||| ||||||||||||||   | ||| |||| |  |||||| || || |||||||||||||||||||||    
T  38227788 tgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatccaaaaagtttcattctaaatct-ttccaggttcaatctcattct 38227886  T
Q  137 agaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 189  Q
    | | ||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  38227887 acattctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 38227940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 95 - 212
Target Start/End: Complemental strand, 2529733 - 2529615
Alignment:
Q  95 caaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattatta--catagttcaggcactcaaaaacctctaaggtcc 192  Q
    |||||||||||| ||||||| |  ||||| |||||||| |||| || |||  |||||||||||||  |||| ||||||||||||||| | |||||||| |    
T  2529733 caaaaatccatttttaaactttgtcaggtccaatctcaatctaaaaacttgcctaatcattattatacata-ttcaggcactcaaaatcatctaaggttc 2529635  T
Q  193 aacttaaggggcaaaactac 212  Q
    |||||||||| |||||||||    
T  2529634 aacttaagggacaaaactac 2529615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 119 - 196
Target Start/End: Complemental strand, 28505033 - 28504955
Alignment:
Q  119 caggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 196  Q
    ||||||||||||||||||| | ||||| ||||||||||||| | | |||||||||||||||||| |||||||| |||||    
T  28505033 caggttcaatctcattctacattctttcctaatcattattagacatgttcaggcactcaaaaacatctaaggttcaact 28504955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 93 - 186
Target Start/End: Original strand, 14045187 - 14045281
Alignment:
Q  93 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattat--tacatagttcaggcactcaaaaacctcta 186  Q
    |||||||||||||| ||||||| | ||||||||||||||| |||| || |||  |||||||||||  |||||| ||||||||||||||||| ||||    
T  14045187 cccaaaaatccatttttaaactttcccaggttcaatctcaatctaaaaacttgcctaatcattattatacata-ttcaggcactcaaaaacatcta 14045281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 93 - 186
Target Start/End: Original strand, 14355217 - 14355311
Alignment:
Q  93 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattat--tacatagttcaggcactcaaaaacctcta 186  Q
    |||||||||||||| ||||||| | ||||||||||||||| |||| || |||  |||||||||||  |||||| ||||||||||||||||| ||||    
T  14355217 cccaaaaatccatttttaaactttcccaggttcaatctcaatctaaaaacttgcctaatcattattatacata-ttcaggcactcaaaaacatcta 14355311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 37 - 189
Target Start/End: Original strand, 9509495 - 9509649
Alignment:
Q  37 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatc-cattcttaaactattccaggttcaatctcattc 135  Q
    |||||| |||||||||||||  |||||| |||||| ||||||||||||||   | ||||| || |  ||||||  ||   |||||||||||||||||| |    
T  9509495 ctgggtcactcgcgaggcgagagcctctcctcgccgtggcgagttcaggtcagaatcccacaagtttcattctacaatctttccaggttcaatctcatcc 9509594  T
Q  136 tagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 189  Q
    || | ||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  9509595 tacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 9509649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 115 - 196
Target Start/End: Complemental strand, 16385994 - 16385912
Alignment:
Q  115 attccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 196  Q
    ||||||||||||||||||| ||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||| |||||    
T  16385994 attccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaact 16385912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 115 - 196
Target Start/End: Original strand, 40443762 - 40443844
Alignment:
Q  115 attccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 196  Q
    ||||||||||||||||||| ||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||| |||||    
T  40443762 attccaggttcaatctcatcctaaattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaact 40443844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 116 - 196
Target Start/End: Complemental strand, 15754622 - 15754541
Alignment:
Q  116 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 196  Q
    ||||||||||||||||||||||   ||||| ||||||||||||| | | |||||||||||||||| | |||||||| |||||    
T  15754622 ttccaggttcaatctcattctactttctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaact 15754541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 93 - 176
Target Start/End: Original strand, 12901768 - 12901852
Alignment:
Q  93 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactca 176  Q
    |||||||||||||| ||||||| | ||||||||||||||| |||| || |||  ||||||||||||| | | |||||||||||||    
T  12901768 cccaaaaatccatttttaaactttcccaggttcaatctcaatctaaaaacttgcctaatcattattatacatgttcaggcactca 12901852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 93 - 186
Target Start/End: Original strand, 14036637 - 14036731
Alignment:
Q  93 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcatta--ttacatagttcaggcactcaaaaacctcta 186  Q
    |||||||||||||| ||||||| | | ||||||||||||| |||| || |||  ||||||||||  ||||||| ||||||||||||||||| ||||    
T  14036637 cccaaaaatccatttttaaactttcctaggttcaatctcaatctaaaaacttgcctaatcattattttacata-ttcaggcactcaaaaacatcta 14036731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 93 - 186
Target Start/End: Original strand, 14346667 - 14346761
Alignment:
Q  93 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcatta--ttacatagttcaggcactcaaaaacctcta 186  Q
    |||||||||||||| ||||||| | | ||||||||||||| |||| || |||  ||||||||||  ||||||| ||||||||||||||||| ||||    
T  14346667 cccaaaaatccatttttaaactttcctaggttcaatctcaatctaaaaacttgcctaatcattattttacata-ttcaggcactcaaaaacatcta 14346761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 186
Target Start/End: Complemental strand, 1867743 - 1867650
Alignment:
Q  94 ccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattat--tacatagttcaggcactcaaaaacctcta 186  Q
    ||||||||||||| ||||||| | ||||||||||||||| |||| || |||  |||||||||||  |||||| |||||||||| |||||| ||||    
T  1867743 ccaaaaatccatttttaaactttcccaggttcaatctcaatctaaaaacttgcctaatcattattatacata-ttcaggcactaaaaaacatcta 1867650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 115 - 196
Target Start/End: Complemental strand, 27847580 - 27847498
Alignment:
Q  115 attccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 196  Q
    ||||||||||||||||||| ||| | ||||| |||||||| |||| | | |||||||||||||||| | |||||||| |||||    
T  27847580 attccaggttcaatctcatcctaaattctttcctaatcataattagacatgttcaggcactcaaaagcatctaaggttcaact 27847498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 116 - 188
Target Start/End: Complemental strand, 3564099 - 3564026
Alignment:
Q  116 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaag 188  Q
    |||||||||||||||||| ||| | ||||| ||||||||||||| | | |||||||||||||||| | ||||||    
T  3564099 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaag 3564026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 37 - 86
Target Start/End: Original strand, 26212302 - 26212351
Alignment:
Q  37 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggt 86  Q
    |||||| |||||||||||||  ||||||||||||| ||||||||||||||    
T  26212302 ctgggtcactcgcgaggcgagagcctctactcgccgtggcgagttcaggt 26212351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 137
Target Start/End: Original strand, 35366540 - 35366631
Alignment:
Q  45 ctcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattcta 137  Q
    ||||||||||||  ||||| |||||||| ||||||||  |||  ||| | ||| |||||||||| | ||||||||| ||||||||||||||||    
T  35366540 ctcgcgaggcgagagcctc-actcgccacggcgagttagggtaaaacactcaagaatccattctgacactattccaagttcaatctcattcta 35366631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 84
Target Start/End: Complemental strand, 9177470 - 9177431
Alignment:
Q  45 ctcgcgaggcgatggcctctactcgccatggcgagttcag 84  Q
    |||||||||||| ||||||||||||| |||||||||||||    
T  9177470 ctcgcgaggcgagggcctctactcgctatggcgagttcag 9177431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 189
Target Start/End: Original strand, 12699218 - 12699292
Alignment:
Q  116 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 189  Q
    ||||||||||||| |||| ||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  12699218 ttccaggttcaatttcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 12699292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 85
Target Start/End: Complemental strand, 15008313 - 15008263
Alignment:
Q  35 aactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcagg 85  Q
    ||||||| ||||||||||||||  |||||||||||| |||| |||||||||    
T  15008313 aactgggcaactcgcgaggcgagagcctctactcgctatggtgagttcagg 15008263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 83
Target Start/End: Original strand, 12901609 - 12901682
Alignment:
Q  10 catttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttca 83  Q
    ||||||||||||||| |  || ||||| |||  |||||| |||||||  |||||||||||| ||||||||||||    
T  12901609 catttaacctaacaaggtgttttgtaaatggacaactcgtgaggcgagagcctctactcgctatggcgagttca 12901682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 96 - 176
Target Start/End: Complemental strand, 15008199 - 15008118
Alignment:
Q  96 aaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactca 176  Q
    ||||||||||| | ||||| | ||||||||||||||| |||| ||  || |||||||||||||| | | |||||||||||||    
T  15008199 aaaaatccattttaaaactttcccaggttcaatctcaatctaaaaaattgtctaatcattattatacatgttcaggcactca 15008118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 86
Target Start/End: Original strand, 40443695 - 40443744
Alignment:
Q  37 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggt 86  Q
    |||||| |||||||||||||  |||||| |||||| ||||||||||||||    
T  40443695 ctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 40443744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 196
Target Start/End: Complemental strand, 11995768 - 11995712
Alignment:
Q  141 tcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 196  Q
    ||||| ||||||||||||| | | |||||||||||||||||| |||||||| |||||    
T  11995768 tctttcctaatcattattagacatgttcaggcactcaaaaacatctaaggttcaact 11995712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 201
Target Start/End: Complemental strand, 17017146 - 17017040
Alignment:
Q  96 aaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattatt--acatagttcaggcactcaaaaacctctaaggtcca 193  Q
    ||||||||||| ||||||| |  |  ||||||||||| |||| || |||  ||||||||||||  ||||| ||||||||||||||| | ||||| || ||    
T  17017146 aaaaatccatttttaaactttctcttgttcaatctcaatctaaaaacttgcctaatcattattgtacata-ttcaggcactcaaaatcatctaaagttca 17017048  T
Q  194 acttaagg 201  Q
    ||||||||    
T  17017047 acttaagg 17017040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 133; Significance: 3e-69; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 6 - 235
Target Start/End: Original strand, 32812 - 33039
Alignment:
Q  6 atcgcatttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccat 105  Q
    ||||||||||||| ||||| | |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  32812 atcgcatttaacccaacaaggcattctgtaactgggtagctcgcgaggcgagggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccat 32911  T
Q  106 tcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaacttaaggggc 204  Q
    ||||| ||||||||| ||||||||||| |||||||||||| ||||||||||||||| | ||||||||||||| || | ||||| || ||||||||||  |    
T  32912 tcttagactattccaagttcaatctcaatctagaatctttcctaatcattattacacatgttcaggcactcagaatcatctaaagttcaacttaaggacc 33011  T
Q  205 aaaactactacgaaaccatgtcgactctctg 235  Q
    |||   ||||||||| ||||| |||||||||    
T  33012 aaa---actacgaaatcatgttgactctctg 33039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 189
Target Start/End: Complemental strand, 51619 - 51545
Alignment:
Q  116 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 189  Q
    |||||||||||||||||| ||| | ||| | ||||||||||||| | | |||||||||||||||| | |||||||    
T  51619 ttccaggttcaatctcatcctacattctctcctaatcattattaaacatgttcaggcactcaaaagcatctaagg 51545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556 (Bit Score: 131; Significance: 5e-68; HSPs: 2)
Name: scaffold0556
Description:

Target: scaffold0556; HSP #1
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 16 - 235
Target Start/End: Original strand, 8302 - 8519
Alignment:
Q  16 acctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaacta 115  Q
    ||||||||||| ||| |||||||||  |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8302 acctaacaaagcattatgtaactggacaactcgcgaggcgagggcctccactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaacta 8401  T
Q  116 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaacttaaggggcaaaactacta 214  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| |  ||||| ||| ||||||| | |||||| ||||||||||| ||||   ||||    
T  8402 ttccaggttcaatctcaatctagaatcttttctaatcattattacacatattcagacacccaaaaacatttaaggttcaacttaagggtcaaa---acta 8498  T
Q  215 cgaaaccatgtcgactctctg 235  Q
    ||||| ||||| |||||||||    
T  8499 cgaaatcatgttgactctctg 8519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 189
Target Start/End: Original strand, 7081 - 7271
Alignment:
Q  1 caagtatcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaa 99  Q
    |||| |||||||||||||||| ||| | ||||||||||| | || ||||| ||||||  ||||||||||||||||||||||||||||  |  || |||||    
T  7081 caagaatcgcatttaacctaaacaaggcattctgtaactagttagctcgcaaggcgagagcctctactcgccatggcgagttcaggttcagttcacaaaa 7180  T
Q  100 atccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 189  Q
    || |||||| |||   |||||||||||||||||||||  ||||||| ||||||||||||| | | |||||||||||||||||| |||||||    
T  7181 attcattctaaaatctttccaggttcaatctcattctccaatctttcctaatcattattagacatgttcaggcactcaaaaacatctaagg 7271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 125; Significance: 2e-64; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 6 - 235
Target Start/End: Original strand, 23019683 - 23019910
Alignment:
Q  6 atcgcatttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccat 105  Q
    ||||||||||||||||| ||| ||| ||||| |||  |||||||||||| | |||||||||||||||||||||||||||||||||||||||||||| |||    
T  23019683 atcgcatttaacctaaccaagcattttgtaattggacaactcgcgaggcaagggcctctactcgccatggcgagttcaggtgtaactcccaaaaattcat 23019782  T
Q  106 tcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaacttaaggggc 204  Q
    ||||||| ||||||||||||||||||| |||| ||||||| ||||||||||| ||| | |||||||||||||||| | |||||||| ||||||||||| |    
T  23019783 tcttaaaatattccaggttcaatctcaatctaaaatctttcctaatcattatcacacatgttcaggcactcaaaagcatctaaggttcaacttaagggtc 23019882  T
Q  205 aaaactactacgaaaccatgtcgactctctg 235  Q
    |||   ||||||||| ||||| |||||||||    
T  23019883 aaa---actacgaaatcatgttgactctctg 23019910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 15 - 208
Target Start/End: Original strand, 25644607 - 25644801
Alignment:
Q  15 aacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaact 114  Q
    |||||||  ||| |||||| ||| ||| |||||||||||||| ||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  25644607 aacctaaacaagcattctgaaaccgggcaactcgcgaggcgagggcctctactcgctatggcgagttcgggtgtaactcccaaaaatccattcttaaact 25644706  T
Q  115 attccaggttcaatctcattctagaatcttttctaatca---ttattacatagttcaggcactcaaaaacctctaaggtccaacttaaggggcaaaa 208  Q
    ||| |||||||||||||| |||| ||||||| |||||||   ||| ||||| |  ||||||||||||||| |||||||| |||||||| || |||||    
T  25644707 atttcaggttcaatctcaatctaaaatctttcctaatcaacgtta-tacat-gaacaggcactcaaaaacatctaaggttcaacttaaaggtcaaaa 25644801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 27333134 - 27332926
Alignment:
Q  1 caagtatcgcatttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaa 100  Q
    |||| ||| ||||||||||||||||| ||||||||| |||| |  |||||||||||  ||||||||||||||||||||||||||||| ||||| |||||     
T  27333134 caaggatcacatttaacctaacaaagcattctgtaattgggcagttcgcgaggcgagagcctctactcgccatggcgagttcaggtgcaactcacaaaac 27333035  T
Q  101 tccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaacttaa 199  Q
    | |||||| |||   |||||||||||| ||||||||| ||||||| |||||||| |||| | | |||||| ||||||||| | |||||||| ||||||||    
T  27333034 ttcattctaaaatctttccaggttcaacctcattctaaaatctttcctaatcatcattatacatgttcagccactcaaaagcatctaaggttcaacttaa 27332935  T
Q  200 ggggcaaaa 208  Q
     || |||||    
T  27332934 aggtcaaaa 27332926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 27393874 - 27393666
Alignment:
Q  1 caagtatcgcatttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaa 100  Q
    |||| ||| ||||||||||||||||| ||||||||| |||| |  |||||||||||  ||||||||||||||||||||||||||||| ||||| |||||     
T  27393874 caaggatcacatttaacctaacaaagcattctgtaattgggcagttcgcgaggcgagagcctctactcgccatggcgagttcaggtgcaactcacaaaac 27393775  T
Q  101 tccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaacttaa 199  Q
    | |||||| |||   |||||||||||| ||||||||| ||||||| |||||||| |||| | | |||||| ||||||||| | |||||||| ||||||||    
T  27393774 ttcattctaaaatctttccaggttcaacctcattctaaaatctttcctaatcatcattatacatgttcagccactcaaaagcatctaaggttcaacttaa 27393675  T
Q  200 ggggcaaaa 208  Q
     || |||||    
T  27393674 aggtcaaaa 27393666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 45 - 196
Target Start/End: Complemental strand, 22080543 - 22080391
Alignment:
Q  45 ctcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatctt 144  Q
    ||||||||||||  |||||||||||||||||||||||||||| ||||||||| || | | |||||||||||||||||||||||||| | |||  ||||||    
T  22080543 ctcgcgaggcgagagcctctactcgccatggcgagttcaggtataactcccataagttcgttcttaaactattccaggttcaatcttaatctctaatctt 22080444  T
Q  145 ttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 196  Q
    ||||||||||||||| | | |||||| ||||||||||| |||||||| |||||    
T  22080443 ttctaatcattattagacatgttcagtcactcaaaaacatctaaggttcaact 22080391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 48 - 199
Target Start/End: Complemental strand, 25956424 - 25956272
Alignment:
Q  48 gcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttc 147  Q
    |||||||||  |||||||||||||||||||| | ||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  25956424 gcgaggcgagagcctctactcgccatggcgaatacaggtgtaactccaaaaaatccattcttaaactattccaggttaaatctcaatctagaatcttttc 25956325  T
Q  148 taatcattattacata-gttcaggcactcaaaaacctctaaggtccaacttaa 199  Q
     |||| | |||| | | |||||||||||||||||  |||||| | ||||||||    
T  25956324 caatcgtaattagacatgttcaggcactcaaaaatatctaagattcaacttaa 25956272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 189
Target Start/End: Complemental strand, 4668063 - 4667874
Alignment:
Q  1 caagtatcgcatttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaa 100  Q
    |||| ||||||||||||||| ||| | ||||||||| |||||| ||||||||||||  ||||||||||||||||||||||||||||  |  || ||||||    
T  4668063 caaggatcgcatttaacctagcaaggcattctgtaaatgggtagctcgcgaggcgagagcctctactcgccatggcgagttcaggttcagttcacaaaaa 4667964  T
Q  101 tccattcttaaact-attccaggttcaatctcattctagaatcttttctaatcattattaca-tagttcaggcactcaaaaacctctaagg 189  Q
    | ||||| ||||||  |||||||| |||||||| |||| | ||||| |||||| |||||| | | |||||||||||||||| | |||||||    
T  4667963 ttcattc-taaactctttccaggtccaatctcactctacattctttcctaatcgttattagacttgttcaggcactcaaaagcatctaagg 4667874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 6 - 181
Target Start/End: Original strand, 19652470 - 19652647
Alignment:
Q  6 atcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatcca 104  Q
    |||||||||| ||||| ||| | ||| ||||||| | || | ||||||||||  ||||||||||||||||||||||||||||  || || ||||||| ||    
T  19652470 atcgcatttatcctaaacaaggtattttgtaactagttagcccgcgaggcgagagcctctactcgccatggcgagttcaggtacaattcacaaaaattca 19652569  T
Q  105 ttcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaac 181  Q
    |||| ||    |||||||||||||||||||||  ||||||| ||||||||||||| | | ||||||||||||||||||    
T  19652570 ttctaaagtctttccaggttcaatctcattcttcaatctttcctaatcattattagacatgttcaggcactcaaaaac 19652647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 189
Target Start/End: Complemental strand, 4185673 - 4185484
Alignment:
Q  1 caagtatcgcatttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaa 100  Q
    |||| ||||||||||||||| ||| | ||||| ||| |||||| ||||||||||||  ||||||||||||||||||||||||||||  |  || ||||||    
T  4185673 caaggatcgcatttaacctagcaaggcattctataaatgggtagctcgcgaggcgagagcctctactcgccatggcgagttcaggttcagttcacaaaaa 4185574  T
Q  101 tccattcttaaact-attccaggttcaatctcattctagaatcttttctaatcattattaca-tagttcaggcactcaaaaacctctaagg 189  Q
    | ||||| ||||||  ||||||||||||||||| |||| | |||||  ||||| |||||| | | ||||| |||||||||| | |||||||    
T  4185573 ttcattc-taaactctttccaggttcaatctcactctacattctttcataatcgttattagacttgttcatgcactcaaaagcatctaagg 4185484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 189
Target Start/End: Complemental strand, 4674910 - 4674721
Alignment:
Q  1 caagtatcgcatttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaa 100  Q
    |||| ||||||||||||||| ||| | ||||||||| |||||| ||||||||||||  |||||||||||||||| |||||| ||||  |  || ||||||    
T  4674910 caaggatcgcatttaacctagcaaggcattctgtaaatgggtagctcgcgaggcgagagcctctactcgccatgacgagttaaggttcagttcacaaaaa 4674811  T
Q  101 tccattcttaaact-attccaggttcaatctcattctagaatcttttctaatcattattaca-tagttcaggcactcaaaaacctctaagg 189  Q
    | ||||| ||||||  |||||||| |||||||| |||| | ||||| |||||| |||||| | | |||||||||||||||| | |||||||    
T  4674810 ttcattc-taaactctttccaggtccaatctcactctacattctttcctaatcgttattagacttgttcaggcactcaaaagcatctaagg 4674721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 29 - 189
Target Start/End: Original strand, 18457014 - 18457174
Alignment:
Q  29 ttctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaa-tccattcttaaactattccaggttcaa 127  Q
    |||||||| |||| ||||||||||||||  |||||||||||||||||| |||||||||  | || ||||||| | ||||||| || || |||||||||||    
T  18457014 ttctgtaattgggcaactcgcgaggcgagagcctctactcgccatggctagttcaggt-cagcttccaaaaagttcattctt-aattaatccaggttcaa 18457111  T
Q  128 tctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 189  Q
    |||||||||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  18457112 tctcattctacattctttcctaatcattattaaacatgttcaggcactcaaaagcatctaagg 18457174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 6 - 189
Target Start/End: Original strand, 4189232 - 4189416
Alignment:
Q  6 atcgcatttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccat 105  Q
    ||||||||||||||| ||| | ||||||||| |||||| ||||||||||||  |||||||||||||||| |||||| ||||  |  || ||||||| |||    
T  4189232 atcgcatttaacctagcaaggcattctgtaaatgggtagctcgcgaggcgagagcctctactcgccatgacgagtttaggttcagttcacaaaaattcat 4189331  T
Q  106 tcttaaact-attccaggttcaatctcattctagaatcttttctaatcattattaca-tagttcaggcactcaaaaacctctaagg 189  Q
    || ||||||  |||||||| |||||||| |||| | ||||| |||||| |||||| | | |||||||||||||||| | |||||||    
T  4189332 tc-taaactctttccaggtccaatctcactctacattctttcctaatcgttattagacttgttcaggcactcaaaagcatctaagg 4189416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 44 - 189
Target Start/End: Complemental strand, 29808691 - 29808544
Alignment:
Q  44 actcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactatt-ccaggttcaatctcattctagaatc 142  Q
    |||||||||||||  |||||| |||||||||||||||||||||   | |||||||  | |||||| ||| | || |||||||||||||||||||| | ||    
T  29808691 actcgcgaggcgagagcctctgctcgccatggcgagttcaggtcagattcccaaagtttcattctaaaaatctttccaggttcaatctcattctacattc 29808592  T
Q  143 ttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 189  Q
    ||||||||||||||||| | | |||||||||||||||| | |||||||    
T  29808591 ttttctaatcattattagacatgttcaggcactcaaaagcatctaagg 29808544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 94 - 212
Target Start/End: Complemental strand, 9098206 - 9098087
Alignment:
Q  94 ccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacat-agttcaggcactcaaaaacctctaaggtcc 192  Q
    ||||||||||||| ||||||| | ||||||||||| ||| ||||||| ||| |||||||||||||| ||  ||||||||||||| || | ||||| || |    
T  9098206 ccaaaaatccatttttaaactttcccaggttcaatatcaatctagaaacttgtctaatcattattatatctgttcaggcactcagaatcatctaaagttc 9098107  T
Q  193 aacttaaggggcaaaactac 212  Q
     ||||||||| |||||||||    
T  9098106 gacttaagggtcaaaactac 9098087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 44 - 189
Target Start/End: Complemental strand, 28496280 - 28496134
Alignment:
Q  44 actcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatc-cattcttaaactattccaggttcaatctcattctagaatc 142  Q
    |||||||||||||  |||||| |||||||||||||||||||||   | || ||||| |  |||||| |  || |||||||||||||||||||||| | ||    
T  28496280 actcgcgaggcgagagcctctgctcgccatggcgagttcaggtcagattctcaaaagtttcattctaagtct-ttccaggttcaatctcattctacattc 28496182  T
Q  143 ttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 189  Q
    ||||||||||||||||| | | |||||||||||||||| | |||||||    
T  28496181 ttttctaatcattattagacatgttcaggcactcaaaagcatctaagg 28496134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 115 - 189
Target Start/End: Complemental strand, 20360707 - 20360632
Alignment:
Q  115 attccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 189  Q
    ||||||||||||||||||| ||| | ||||| ||||||||||||| | | |||||||||||||||||| |||||||    
T  20360707 attccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaaacatctaagg 20360632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 37 - 189
Target Start/End: Original strand, 29060847 - 29061000
Alignment:
Q  37 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattct 136  Q
    |||||| |||||||||||||  ||||||||||| | ||||||||||||||   | | |||||| | ||||||  ||   |||||||||||||||||| ||    
T  29060847 ctgggtcactcgcgaggcgagagcctctactcgtcgtggcgagttcaggtcagatttccaaaagttcattctacaatctttccaggttcaatctcatcct 29060946  T
Q  137 agaatcttttctaatcattatt--acatagttcaggcactcaaaaacctctaagg 189  Q
    | | || || ||||||||||||  |||| |||||||||||||||| | |||||||    
T  29060947 acattccttcctaatcattattggacat-gttcaggcactcaaaagcatctaagg 29061000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 37 - 189
Target Start/End: Complemental strand, 19303355 - 19303202
Alignment:
Q  37 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatc-cattcttaaactattccaggttcaatctcattc 135  Q
    |||||| |||| ||||||||  |||||| |||||| ||||||||||||||   | | |||||| |  |||||| || || ||| ||||||||||||||||    
T  19303355 ctgggtcactctcgaggcgagagcctctgctcgccgtggcgagttcaggtcagatttccaaaagtttcattctaaatcttttc-aggttcaatctcattc 19303257  T
Q  136 tagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 189  Q
    || | ||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  19303256 tacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 19303202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 115 - 196
Target Start/End: Complemental strand, 20638030 - 20637948
Alignment:
Q  115 attccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 196  Q
    ||||||||||||||||||| ||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||| |||||    
T  20638030 attccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaact 20637948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 116 - 196
Target Start/End: Original strand, 1561689 - 1561770
Alignment:
Q  116 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 196  Q
    ||||||||||||||||||||||   ||||| ||||||||||||| | | |||||||||||||||| | |||||||| |||||    
T  1561689 ttccaggttcaatctcattctactttctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaact 1561770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 93 - 212
Target Start/End: Original strand, 20109578 - 20109698
Alignment:
Q  93 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtc 191  Q
    ||||| |||||||| ||||||| | | ||||||||||||| |||| || |||  ||||||||||||| | | ||||||||||||| || | ||||| ||     
T  20109578 cccaataatccatttttaaactttcctaggttcaatctcaatctaaaaacttgcctaatcattattatacatgttcaggcactcagaatcatctaaagtt 20109677  T
Q  192 caacttaaggggcaaaactac 212  Q
    ||||||||||  |||||||||    
T  20109678 caacttaaggatcaaaactac 20109698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 85
Target Start/End: Original strand, 19668653 - 19668728
Alignment:
Q  10 catttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcagg 85  Q
    ||||||||||||||| |  |||||||| |||  | ||||||||||||  |||||||||||| ||||||||||||||    
T  19668653 catttaacctaacaaggtgttctgtaattggacagctcgcgaggcgagagcctctactcgctatggcgagttcagg 19668728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 37 - 156
Target Start/End: Complemental strand, 25629169 - 25629050
Alignment:
Q  37 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattct 136  Q
    |||||| |||||||||||||  |||||| ||||||| ||||||| |||||   | || ||||| |  ||||| |||   |||||||||||||||||||||    
T  25629169 ctgggtcactcgcgaggcgagagcctctgctcgccacggcgagtacaggtcataatcacaaaagtttattctaaaatatttccaggttcaatctcattct 25629070  T
Q  137 agaatcttttctaatcatta 156  Q
    | ||| ||| ||||||||||    
T  25629069 acaatatttcctaatcatta 25629050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 115 - 196
Target Start/End: Complemental strand, 18821566 - 18821484
Alignment:
Q  115 attccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 196  Q
    ||||||||||||||||||| ||| | ||| | ||||||||||||| | | |||||||||||||||| | |||||||| |||||    
T  18821566 attccaggttcaatctcatcctacattctctcctaatcattattaaacatgttcaggcactcaaaagcatctaaggttcaact 18821484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 116 - 189
Target Start/End: Complemental strand, 22779962 - 22779888
Alignment:
Q  116 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 189  Q
    |||||||||||||||||| ||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  22779962 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 22779888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 115 - 196
Target Start/End: Complemental strand, 16920380 - 16920298
Alignment:
Q  115 attccaggttcaatctcattctagaatcttttctaatcattatt--acatagttcaggcactcaaaaacctctaaggtccaact 196  Q
    ||||||||| |||||| || ||| | ||||||||||||||||||  ||||| ||||||||||||||| | |||||||| |||||    
T  16920380 attccaggtacaatcttatcctacattcttttctaatcattattagacata-ttcaggcactcaaaagcatctaaggttcaact 16920298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 83
Target Start/End: Original strand, 17106048 - 17106086
Alignment:
Q  45 ctcgcgaggcgatggcctctactcgccatggcgagttca 83  Q
    |||||||| ||| ||||||||||||||||||||||||||    
T  17106048 ctcgcgagtcgagggcctctactcgccatggcgagttca 17106086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 189
Target Start/End: Complemental strand, 18409562 - 18409488
Alignment:
Q  116 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 189  Q
    |||||||||||||||||||||| | ||||| |||||||||| || | | ||| |||||||||||| | |||||||    
T  18409562 ttccaggttcaatctcattctacattctttcctaatcattaatagacatgttaaggcactcaaaagcatctaagg 18409488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 86
Target Start/End: Complemental strand, 31155241 - 31155163
Alignment:
Q  8 cgcatttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggt 86  Q
    ||||||||||||||||| | ||  |||||  ||||| ||||||||||||  |||||| |||||||||| |||| |||||    
T  31155241 cgcatttaacctaacaaggcatgttgtaaaggggtagctcgcgaggcgagagcctctgctcgccatggagagtacaggt 31155163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 86
Target Start/End: Original strand, 11185808 - 11185857
Alignment:
Q  37 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggt 86  Q
    |||||| |||| |||||||| ||||||| |||||| ||||||||||||||    
T  11185808 ctgggtcactcacgaggcgagggcctctgctcgccgtggcgagttcaggt 11185857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 86
Target Start/End: Complemental strand, 16920448 - 16920399
Alignment:
Q  37 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggt 86  Q
    |||||| |||||| ||||||  |||||| |||||||||||||||||||||    
T  16920448 ctgggtcactcgcaaggcgagagcctctgctcgccatggcgagttcaggt 16920399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 83
Target Start/End: Complemental strand, 18177471 - 18177438
Alignment:
Q  50 gaggcgatggcctctactcgccatggcgagttca 83  Q
    ||||||| ||||||||||||||||||||||||||    
T  18177471 gaggcgagggcctctactcgccatggcgagttca 18177438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 83
Target Start/End: Original strand, 18204400 - 18204433
Alignment:
Q  50 gaggcgatggcctctactcgccatggcgagttca 83  Q
    ||||||| ||||||||||||||||||||||||||    
T  18204400 gaggcgagggcctctactcgccatggcgagttca 18204433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 86
Target Start/End: Complemental strand, 18821626 - 18821585
Alignment:
Q  45 ctcgcgaggcgatggcctctactcgccatggcgagttcaggt 86  Q
    ||||||||||||  |||||| |||||||||||||||||||||    
T  18821626 ctcgcgaggcgagagcctctgctcgccatggcgagttcaggt 18821585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 86
Target Start/End: Complemental strand, 20360775 - 20360726
Alignment:
Q  37 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggt 86  Q
    |||||| |||||||||||||  |||||  |||||||||||||||||||||    
T  20360775 ctgggtcactcgcgaggcgagagcctcagctcgccatggcgagttcaggt 20360726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 157
Target Start/End: Original strand, 16830111 - 16830223
Alignment:
Q  45 ctcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatctt 144  Q
    ||||||||||||  |||||||||||||| |||||||| ||||  ||| | ||| |||||||||| |  |  ||||  |||||||||||||||| ||  ||    
T  16830111 ctcgcgaggcgagagcctctactcgccacggcgagttaaggtaaaacgctcaagaatccattctgactcatttccgagttcaatctcattctaaaacttt 16830210  T
Q  145 ttctaatcattat 157  Q
      |||||||||||    
T  16830211 gcctaatcattat 16830223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 95 - 159
Target Start/End: Original strand, 19023814 - 19023878
Alignment:
Q  95 caaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattatta 159  Q
    |||||||||||| ||||||| |  |||||||||||||| |||| || |||  |||||||||||||    
T  19023814 caaaaatccatttttaaactttctcaggttcaatctcaatctaaaaacttgcctaatcattatta 19023878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 199
Target Start/End: Original strand, 19668812 - 19668918
Alignment:
Q  94 ccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattat--tacatagttcaggcactcaaaaacctctaaggtc 191  Q
    |||||||| |||| |||||||   ||||||||||||||| | || || ||| ||||||||||||  ||||| |||||| |||||| |||| ||||||||     
T  19668812 ccaaaaattcatttttaaacttccccaggttcaatctcaatataaaaacttgtctaatcattatgatacat-gttcagacactcagaaacatctaaggtt 19668910  T
Q  192 caacttaa 199  Q
    | ||||||    
T  19668911 cgacttaa 19668918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 124; Significance: 7e-64; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 6 - 212
Target Start/End: Original strand, 10804 - 11011
Alignment:
Q  6 atcgcatttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccat 105  Q
    ||||||||||||||||||| | ||| || |||| |||||||||||||||||  |||||||||||| |||||||||||||||||||||| ||||||| |||    
T  10804 atcgcatttaacctaacaaggcattttggaactaggtaactcgcgaggcgagagcctctactcgctatggcgagttcaggtgtaactcacaaaaattcat 10903  T
Q  106 tcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaacttaaggggc 204  Q
    ||||||||||||||||||||||||||| ||||| |||||| ||||||||||||||| | |||||||||||||||||| |||||| | ||||||||||  |    
T  10904 tcttaaactattccaggttcaatctcagtctaggatctttcctaatcattattacacatgttcaggcactcaaaaacatctaagattcaacttaaggatc 11003  T
Q  205 aaaactac 212  Q
    ||||||||    
T  11004 aaaactac 11011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 121; Significance: 4e-62; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 10 - 235
Target Start/End: Complemental strand, 26011875 - 26011652
Alignment:
Q  10 catttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattctt 109  Q
    ||||||||||||||||| ||||||||||| |  |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26011875 catttaacctaacaaagcattctgtaactagacaactcgcgaggcgaaggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattctt 26011776  T
Q  110 aaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaacttaaggggcaaaa 208  Q
    ||||||||||||||||||||||| | ||||||||||  |||||||||||||| | ||| || |||||| || | ||||| || ||||||||||  ||||     
T  26011775 aaactattccaggttcaatctcaatttagaatctttcttaatcattattacacatgtttagacactcataatcatctaaagttcaacttaaggatcaaa- 26011677  T
Q  209 ctactacgaaaccatgtcgactctctg 235  Q
      ||||||||| ||||| |||||||||    
T  26011676 --actacgaaatcatgttgactctctg 26011652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 28 - 235
Target Start/End: Original strand, 22144348 - 22144553
Alignment:
Q  28 attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaa 127  Q
    |||||||||||||| ||||||||||||||  |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  22144348 attctgtaactgggcaactcgcgaggcgagagcctctactcgctatggcgagttcaggtgtaactcccaaaaatccattcttaaattattccaggttcaa 22144447  T
Q  128 tctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaacttaaggggcaaaactactacgaaaccatgtc 226  Q
    ||||| |||||||||||| ||||||||| ||||| | |||||||||||||||| | |||||   |||||||||||  ||||   ||||||||| |||||     
T  22144448 tctcaatctagaatctttcctaatcattgttacacatgttcaggcactcaaaatcatctaaataccaacttaaggatcaaa---actacgaaatcatgtt 22144544  T
Q  227 gactctctg 235  Q
    |||||||||    
T  22144545 gactctctg 22144553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 6 - 208
Target Start/End: Complemental strand, 21329341 - 21329137
Alignment:
Q  6 atcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatcca 104  Q
    |||||||||||||||| ||| | ||||||||||| ||||| |||||||||||  |||||||||||| |||||||||||| ||| ||||||||||||| ||    
T  21329341 atcgcatttaacctaaacaaggcattctgtaactaggtaattcgcgaggcgagagcctctactcgctatggcgagttcaagtgcaactcccaaaaattca 21329242  T
Q  105 ttcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaacttaagggg 203  Q
    ||| |||| ||||||||||||||||||| ||||||||||||||||||||| | || | | |||||||||||||||||| |||||||| |||||||| ||     
T  21329241 ttcctaaattattccaggttcaatctcaatctagaatcttttctaatcataactagacatgttcaggcactcaaaaacatctaaggttcaacttaaaggt 21329142  T
Q  204 caaaa 208  Q
    |||||    
T  21329141 caaaa 21329137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 6 - 212
Target Start/End: Complemental strand, 5889021 - 5888813
Alignment:
Q  6 atcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatcca 104  Q
    |||||||||||||||| ||| | ||||||||| |||||| ||||||||||||  ||||||||||||||||||||||||||||| ||||| |||| || ||    
T  5889021 atcgcatttaacctaaacaaggcattctgtaaatgggtagctcgcgaggcgagagcctctactcgccatggcgagttcaggtgcaactcacaaagattca 5888922  T
Q  105 ttcttaaactattccaggttcaatctcattctagaatcttttctaatcattat--tacatagttcaggcactcaaaaacctctaaggtccaacttaaggg 202  Q
    |||||||||||||||| ||||||||||| |||| ||||||| |||||||| ||  |||| ||||||||||||||||||| |||||| | | |||||| ||    
T  5888921 ttcttaaactattccatgttcaatctcaatctacaatctttcctaatcatcatcataca-agttcaggcactcaaaaacatctaagcttcgacttaaagg 5888823  T
Q  203 gcaaaactac 212  Q
     |||||||||    
T  5888822 tcaaaactac 5888813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 6 - 212
Target Start/End: Complemental strand, 21741389 - 21741181
Alignment:
Q  6 atcgcatttaacctaacaaaga-attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatcca 104  Q
    ||||| ||||||||||  |||| ||| ||||||||| || ||| ||||||||  ||||||||||||||||||||||||||||| ||||| || |||| |     
T  21741389 atcgcttttaacctaaacaagacattatgtaactggttagctcacgaggcgagagcctctactcgccatggcgagttcaggtgcaactcacataaattcg 21741290  T
Q  105 ttcttaaactattccaggttcaatctcattctagaatcttttctaatcattat--tacatagttcaggcactcaaaaacctctaaggtccaacttaaggg 202  Q
    |||||||||||||||||||||||||||| |||| ||||||| ||| |||| ||  |||| ||||||||||||||||||  |||||||| | |||||| ||    
T  21741289 ttcttaaactattccaggttcaatctcaatctataatctttcctattcatcatcataca-agttcaggcactcaaaaatatctaaggttcgacttaaagg 21741191  T
Q  203 gcaaaactac 212  Q
     |||||||||    
T  21741190 tcaaaactac 21741181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 189
Target Start/End: Complemental strand, 22959384 - 22959194
Alignment:
Q  1 caagtatcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaa 99  Q
    |||| |||||||||||||||| ||| | ||||||||||| | || ||||||||||||  ||||||||||||||||||||||||||||  |  || |||||    
T  22959384 caagaatcgcatttaacctaaacaaggcattctgtaactagttagctcgcgaggcgagagcctctactcgccatggcgagttcaggttcagttcacaaaa 22959285  T
Q  100 atccattcttaaactat-tccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 189  Q
    || ||||| |||| | | ||||||||||||||||||||  ||||||| ||||||||||||| | | |||||||||||||||||| |||||||    
T  22959284 attcattc-taaagtctctccaggttcaatctcattctccaatctttcctaatcattattagacatgttcaggcactcaaaaacatctaagg 22959194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 28 - 189
Target Start/End: Original strand, 21565842 - 21566004
Alignment:
Q  28 attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaa 127  Q
    ||||||||||| | || ||| ||||||||  |||||| |||||||||||||||||||||  || || | ||||| |||||| |||   ||||||||||||    
T  21565842 attctgtaactagttagctcacgaggcgagagcctctgctcgccatggcgagttcaggtacaattcacgaaaattcattctaaaatctttccaggttcaa 21565941  T
Q  128 tctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 189  Q
    |||||||||  ||||||| ||||||||||||| | | |||||||||||||||||| |||||||    
T  21565942 tctcattctccaatctttcctaatcattattagacatgttcaggcactcaaaaacatctaagg 21566004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 83 - 208
Target Start/End: Complemental strand, 21498785 - 21498659
Alignment:
Q  83 aggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaac 181  Q
    ||||||||||| |||||||  |||||| |||||||||||||||||||||| |||| ||||| | ||||| ||||||| | | ||||||||||||||||||    
T  21498785 aggtgtaactctcaaaaatttattcttcaactattccaggttcaatctcaatctacaatctctcctaataattattatacatgttcaggcactcaaaaac 21498686  T
Q  182 ctctaaggtccaacttaaggggcaaaa 208  Q
     || ||||| |||||||| || |||||    
T  21498685 atccaaggttcaacttaaaggtcaaaa 21498659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 28 - 189
Target Start/End: Complemental strand, 11581068 - 11580906
Alignment:
Q  28 attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaa-ctattccaggttca 126  Q
    ||||||||| ||||| |||||||||||||  |||||| |||||||||||||||||||||   | || ||||  |  ||||| ||| ||| ||||||||||    
T  11581068 attctgtaaatgggtcactcgcgaggcgagagcctctgctcgccatggcgagttcaggtcagattctcaaagttttattctaaaatcta-tccaggttca 11580970  T
Q  127 atctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 189  Q
    ||||||||||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  11580969 atctcattctacattctttcctaatcattattaaacatgttcaggcactcaaaagcttctaagg 11580906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 5 - 88
Target Start/End: Complemental strand, 21501999 - 21501917
Alignment:
Q  5 tatcgcatttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgt 88  Q
    |||||||||||||| ||||| | |||||| ||||||||||||||||||||||  |||||||||||| |||||||||||||||||    
T  21501999 tatcgcatttaacccaacaaggcattctg-aactgggtaactcgcgaggcgagagcctctactcgctatggcgagttcaggtgt 21501917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 196
Target Start/End: Original strand, 1096765 - 1096934
Alignment:
Q  28 attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaa 127  Q
    |||||||  |||||| |||||||||||||  ||||||||||||| ||||||||||||||   | | |||||| | ||||||  ||   |||||| |||||    
T  1096765 attctgtttctgggtcactcgcgaggcgagagcctctactcgccgtggcgagttcaggtcagatttccaaaagttcattctgcaatctttccagattcaa 1096864  T
Q  128 tctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 196  Q
    |||||| ||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||| |||||    
T  1096865 tctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaact 1096934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 37 - 189
Target Start/End: Complemental strand, 21985961 - 21985808
Alignment:
Q  37 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatc-cattcttaaactattccaggttcaatctcattc 135  Q
    |||||| ||||||||||||| ||||||| || ||| ||||||||||||||   | | |||||| |  |||||| || || ||||||||||||||||||||    
T  21985961 ctgggtcactcgcgaggcgagggcctctgcttgccgtggcgagttcaggtcagaattccaaaagtttcattctaaatct-ttccaggttcaatctcattc 21985863  T
Q  136 tagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 189  Q
    || | ||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  21985862 tacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 21985808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 21871421 - 21871225
Alignment:
Q  1 caagtatcgcatttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaa 100  Q
    |||| ||||| ||||||||| ||| | ||||||||  ||| || |||||||| ||   |||||||||||||||||||||| |||||   | || |||||     
T  21871421 caaggatcgcgtttaacctagcaaggcattctgtatttggttagctcgcgagccgggagcctctactcgccatggcgagtacaggtcagaatcacaaaag 21871322  T
Q  101 tccattct-taaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 196  Q
    |||||||  ||| || |||||||||||||||||| ||| | ||||| |||||||||| || | | |||||||||||||||| | |||||||| |||||    
T  21871321 tccattccataatct-ttccaggttcaatctcatcctacactctttcctaatcattaataaacatgttcaggcactcaaaagcatctaaggttcaact 21871225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 21875701 - 21875505
Alignment:
Q  1 caagtatcgcatttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaa 100  Q
    |||| ||||| ||||||||| ||| | ||||||||  ||| || |||||||| ||   |||||||||||||||||||||| |||||   | || |||||     
T  21875701 caaggatcgcgtttaacctagcaaggcattctgtatttggttagctcgcgagccgggagcctctactcgccatggcgagtacaggtcagaatcacaaaag 21875602  T
Q  101 tccattct-taaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 196  Q
    |||||||  ||| || |||||||||||||||||| ||| | ||||| |||||||||| || | | |||||||||||||||| | |||||||| |||||    
T  21875601 tccattccataatct-ttccaggttcaatctcatcctacactctttcctaatcattaataaacatgttcaggcactcaaaagcatctaaggttcaact 21875505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 28 - 199
Target Start/End: Complemental strand, 36154651 - 36154479
Alignment:
Q  28 attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaa-ctattccaggttca 126  Q
    ||||||||| | ||| |||||||||||||  ||||||||||||||||||||||||||||   | || ||||  |  ||||| ||| ||| ||||||||||    
T  36154651 attctgtaaataggtcactcgcgaggcgagagcctctactcgccatggcgagttcaggtcagattctcaaagttttattctaaaatcta-tccaggttca 36154553  T
Q  127 atctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaacttaa 199  Q
    |||||| |||| | ||||| ||||||||||||| | | ||||| |||||||||| | |||||||  ||||||||    
T  36154552 atctcactctacattctttcctaatcattattagacatgttcaagcactcaaaagcatctaaggatcaacttaa 36154479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 39 - 189
Target Start/End: Complemental strand, 23390309 - 23390157
Alignment:
Q  39 gggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactccca-aaaatccattcttaaactattccaggttcaatctcattcta 137  Q
    |||| ||||| |||||||| ||||||||||||||||||||||||||||   | ||||| ||  | ||||||  ||   |||||||||||||||||| |||    
T  23390309 gggtcactcgtgaggcgatagcctctactcgccatggcgagttcaggtcagaatcccacaagtttcattctacaatctttccaggttcaatctcatccta 23390210  T
Q  138 gaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 189  Q
     | ||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  23390209 cattctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 23390157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 28 - 189
Target Start/End: Original strand, 19669197 - 19669360
Alignment:
Q  28 attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaa-tccattcttaaactattccaggttca 126  Q
    ||||||||||| | || || | |||||||  |||||||| |||||||||||||||||||  || || |||||| | |||||| ||    ||||| |||||    
T  19669197 attctgtaactagttagctggtgaggcgagagcctctacacgccatggcgagttcaggtacaattcacaaaaaattcattctaaagtctttccacgttca 19669296  T
Q  127 atctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 189  Q
    |||||||||   ||||||| ||||||||||||| | | |||||| ||||||||||| |||||||    
T  19669297 atctcattccccaatctttcctaatcattattagacatgttcagacactcaaaaacatctaagg 19669360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 95 - 212
Target Start/End: Complemental strand, 20026619 - 20026501
Alignment:
Q  95 caaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtcca 193  Q
    |||||||||||| ||||||| | ||| ||||||||||| |||| || |||  ||||||||||||| | | |||||||||||||||| | ||||| |  |     
T  20026619 caaaaatccatttttaaactttcccatgttcaatctcaatctaaaaacttgcctaatcattattatacatgttcaggcactcaaaatcatctaaagatcg 20026520  T
Q  194 acttaaggggcaaaactac 212  Q
    ||||||||| |||||||||    
T  20026519 acttaagggtcaaaactac 20026501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 93 - 201
Target Start/End: Complemental strand, 22177901 - 22177792
Alignment:
Q  93 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattat--tacatagttcaggcactcaaaaacctctaaggt 190  Q
    |||||||||||||| ||||||| |  ||||||||| |||| |||| || |||  |||||||||||  |||||| ||||||||||||||| | |||| |||    
T  22177901 cccaaaaatccatttttaaactttctcaggttcaaactcaatctaaaaacttgcctaatcattattatacata-ttcaggcactcaaaatcatctagggt 22177803  T
Q  191 ccaacttaagg 201  Q
     ||||||||||    
T  22177802 tcaacttaagg 22177792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 115 - 196
Target Start/End: Complemental strand, 21292717 - 21292635
Alignment:
Q  115 attccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 196  Q
    ||||||||||||||||||| ||| | ||||| ||||| ||||||| | | |||||||||||||||| | |||||||| |||||    
T  21292717 attccaggttcaatctcatcctacattctttcctaattattattagacatgttcaggcactcaaaagcatctaaggttcaact 21292635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 37 - 189
Target Start/End: Original strand, 24529527 - 24529681
Alignment:
Q  37 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatc-cattcttaaactattccaggttcaatctcattc 135  Q
    |||||| |||||||||||||  |||||| |||||| |||||||||||| |   | | |||||| |  ||||||  |||  |||||||||||||||||| |    
T  24529527 ctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcagatcagaattccaaaagtttcattctacaacctttccaggttcaatctcatcc 24529626  T
Q  136 tagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 189  Q
    || | ||||| ||||||||||||| | | ||||||||||| |||| | |||||||    
T  24529627 tacattctttcctaatcattattagacatgttcaggcactgaaaagcatctaagg 24529681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 116 - 196
Target Start/End: Complemental strand, 19660572 - 19660491
Alignment:
Q  116 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 196  Q
    ||||||||| |||||||||| | | ||||| ||||||||||||| | | |||||||||||||||| | |||||||| |||||    
T  19660572 ttccaggtttaatctcattccacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaact 19660491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 179
Target Start/End: Original strand, 9078338 - 9078402
Alignment:
Q  116 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaa 179  Q
    |||||||||||||||||||||| | | ||| ||||||||||||| | | ||||||||||||||||    
T  9078338 ttccaggttcaatctcattctacattttttcctaatcattattagacatgttcaggcactcaaaa 9078402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 83
Target Start/End: Original strand, 25744036 - 25744074
Alignment:
Q  45 ctcgcgaggcgatggcctctactcgccatggcgagttca 83  Q
    ||||||||||||  |||||||||||||||||||||||||    
T  25744036 ctcgcgaggcgagagcctctactcgccatggcgagttca 25744074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 86
Target Start/End: Original strand, 9078259 - 9078308
Alignment:
Q  37 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggt 86  Q
    |||||| |||||||||||||  |||||| |||||| ||||||||||||||    
T  9078259 ctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 9078308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 86
Target Start/End: Complemental strand, 21292785 - 21292736
Alignment:
Q  37 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggt 86  Q
    |||||| |||||||||||||  |||||| |||||| ||||||||||||||    
T  21292785 ctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 21292736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 86
Target Start/End: Original strand, 22075325 - 22075374
Alignment:
Q  37 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggt 86  Q
    |||||| |||||||||||||  |||||| |||||| ||||||||||||||    
T  22075325 ctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 22075374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 116 - 196
Target Start/End: Complemental strand, 22119928 - 22119847
Alignment:
Q  116 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 196  Q
    |||||||||||||||||| ||| | ||||| ||||||| ||||| | | |||||||||||||||  | |||||||| |||||    
T  22119928 ttccaggttcaatctcatcctacattctttcctaatcaatattagacatgttcaggcactcaaaggcatctaaggttcaact 22119847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 84
Target Start/End: Complemental strand, 20469702 - 20469654
Alignment:
Q  36 actgggtaactcgcgaggcgatggcctctactcgccatggcgagttcag 84  Q
    |||| |||||||||||||||||   |||||||||| |||||||||||||    
T  20469702 actgagtaactcgcgaggcgatccactctactcgctatggcgagttcag 20469654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 116; Significance: 4e-59; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 6 - 212
Target Start/End: Complemental strand, 7902 - 7695
Alignment:
Q  6 atcgcatttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccat 105  Q
    ||||||||||||||| ||| | |||||| |||  |||||||||||||||||  |||||||||||| |||||||||||||||||||| ||||||||| |||    
T  7902 atcgcatttaacctagcaaggcattctggaacaaggtaactcgcgaggcgagagcctctactcgctatggcgagttcaggtgtaacccccaaaaattcat 7803  T
Q  106 tcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaacttaaggggc 204  Q
    ||||||||||||| ||||||||||||| ||||| |||||| ||||||||||||||| | |||||| ||||||||||| |||||||| ||||||||||  |    
T  7802 tcttaaactattctaggttcaatctcagtctaggatctttcctaatcattattacacatgttcagacactcaaaaacatctaaggttcaacttaaggatc 7703  T
Q  205 aaaactac 212  Q
    ||||||||    
T  7702 aaaactac 7695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 111; Significance: 4e-56; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 32 - 212
Target Start/End: Complemental strand, 2051018 - 2050839
Alignment:
Q  32 tgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctc 131  Q
    |||||||||| ||||| ||||||||  |||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  2051018 tgtaactgggcaactcacgaggcgagagcctctactcgctatggagagttcaggtgtaactcccaaaaatccattcttaaactattc--ggttcaatctc 2050921  T
Q  132 attctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaacttaaggggcaaaactac 212  Q
    | |||||||||||| ||||||||||||||| | ||| |||||||||||||| |||||||| ||||||||||| |||||||||    
T  2050920 aatctagaatctttcctaatcattattacacatgttgaggcactcaaaaacatctaaggttcaacttaagggtcaaaactac 2050839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 28 - 235
Target Start/End: Complemental strand, 52523550 - 52523345
Alignment:
Q  28 attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaa 127  Q
    |||||||||||||| ||||||  |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  52523550 attctgtaactgggcaactcgtcaggcgagggcctctactcgctatggcgagttcaggtgtaactcccaaaaatccattcttaaactgttccaggttcaa 52523451  T
Q  128 tctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaacttaaggggcaaaactactacgaaaccatgtc 226  Q
    | |||  ||||||||||| ||||| ||||||||| | |||||||||||||||| | |||||   |||||||||||  ||||   ||||||||| |||||     
T  52523450 tatcaaactagaatctttcctaataattattacacatgttcaggcactcaaaatcatctaaataccaacttaaggaccaaa---actacgaaatcatgtt 52523354  T
Q  227 gactctctg 235  Q
    |||||||||    
T  52523353 gactctctg 52523345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 10 - 200
Target Start/End: Original strand, 324515 - 324706
Alignment:
Q  10 catttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattctt 109  Q
    ||||||||||||||| |  |||||||||| |||||||||||||||||  |||||||||||| |||||||||||||||| ||||||||||||| |||||||    
T  324515 catttaacctaacaaggtgttctgtaacttggtaactcgcgaggcgagagcctctactcgctatggcgagttcaggtgcaactcccaaaaattcattctt 324614  T
Q  110 aaactattccaggttcaatctcattctagaatcttttctaatcattat--tacatagttcaggcactcaaaaacctctaaggtccaacttaag 200  Q
    |||||||||   |||||||||||||||| ||||||| |||||||||||  |||||| ||||||||||||||| | ||||| || |||||||||    
T  324615 aaactattctcagttcaatctcattctacaatctttcctaatcattattatacata-ttcaggcactcaaaatcatctaaagttcaacttaag 324706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 10 - 208
Target Start/End: Original strand, 14234770 - 14234969
Alignment:
Q  10 catttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattct 108  Q
    |||||||||||| ||| | ||||||||||||| || || ||||||||| |||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  14234770 catttaacctaaacaaggcattctgtaactggttagcttgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactcccaaaaattcattct 14234869  T
Q  109 taaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaacttaaggggcaaa 207  Q
    | ||||||| | |||||||||||| |||| ||||||| |||||||| |||| | | |||||||||||||||||  |||||||| |||||||| || ||||    
T  14234870 t-aactatttcgggttcaatctcaatctataatctttcctaatcatcattatacatgttcaggcactcaaaaaaatctaaggttcaacttaaaggtcaaa 14234968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 6 - 196
Target Start/End: Original strand, 15471200 - 15471391
Alignment:
Q  6 atcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatcca 104  Q
    |||||||||||||||| ||||| |||||||||||||| |  || |||||||| |||||||||||||||||||||||||||||||||||| | ||||| |     
T  15471200 atcgcatttaacctaaacaaagcattctgtaactgggcagttcacgaggcgagggcctctactcgccatggcgagttcaggtgtaactctc-aaaattcg 15471298  T
Q  105 ttcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 196  Q
    |||||||||||||||||||||||||| | |||  ||||||| |||||||| |||| | | ||||||| |||||||||| |||||||| |||||    
T  15471299 ttcttaaactattccaggttcaatcttaatctccaatctttcctaatcatcattatacatgttcagggactcaaaaacatctaaggttcaact 15471391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 12 - 212
Target Start/End: Complemental strand, 1465249 - 1465047
Alignment:
Q  12 tttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattctta 110  Q
    |||||||||| ||| | ||||||||||||| || ||||||||||||  |||||||||||||||||| |||||||||| ||||| || |||| | ||||||    
T  1465249 tttaacctaaacaaggcattctgtaactggttagctcgcgaggcgagagcctctactcgccatggcaagttcaggtgcaactcacacaaattcgttctta 1465150  T
Q  111 aactattccaggttcaatctcattctagaatcttttctaatcattat--tacatagttcaggcactcaaaaacctctaaggtccaacttaaggggcaaaa 208  Q
    || ||||||||||||||||||| |||| |||||||  ||||||| ||  |||| ||||||||||||||||||| |||||||| | |||||| || |||||    
T  1465149 aattattccaggttcaatctcaatctacaatctttcataatcatcatcataca-agttcaggcactcaaaaacatctaaggttcgacttaaaggtcaaaa 1465051  T
Q  209 ctac 212  Q
    ||||    
T  1465050 ctac 1465047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 28 - 189
Target Start/End: Complemental strand, 17248109 - 17247947
Alignment:
Q  28 attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaa 127  Q
    ||||||||||||||| |||||||||||||  |||||| |||||||||||||||||||||   | |||||||  | |||||| |||   ||||||||||||    
T  17248109 attctgtaactgggtcactcgcgaggcgagagcctctgctcgccatggcgagttcaggtcagattcccaaagtttcattctaaaatctttccaggttcaa 17248010  T
Q  128 tctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 189  Q
    |||||||||| | ||||| ||||||||||||| | | |||||||||||||||||| |||||||    
T  17248009 tctcattctacattctttcctaatcattattagacatgttcaggcactcaaaaacatctaagg 17247947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 29 - 212
Target Start/End: Original strand, 42386710 - 42386894
Alignment:
Q  29 ttctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaa-atccattcttaaactattccaggttcaa 127  Q
    |||||||| |||| ||||||||||| ||  |||||||||||||||||||||||||||| ||||||||||||  | ||||||| ||||||| |||||||||    
T  42386710 ttctgtaattgggcaactcgcgaggtgagagcctctactcgccatggcgagttcaggtataactcccaaaagtttcattctt-aactatttcaggttcaa 42386808  T
Q  128 tctcattctagaatcttttctaatcattatta--catagttcaggcactcaaaaacctctaaggtccaacttaaggggcaaaactac 212  Q
    || || |||| | ||||  |||||||||||||  ||| ||||| ||||||| ||||  ||||||| |||||||| || |||||||||    
T  42386809 tcacagtctaaagtcttgcctaatcattattatgcat-gttcatgcactcataaacaactaaggttcaacttaaaggtcaaaactac 42386894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 29 - 189
Target Start/End: Complemental strand, 53070520 - 53070360
Alignment:
Q  29 ttctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaa-tccattcttaaactattccaggttcaa 127  Q
    |||||||| |||| ||||||||||||||  ||||||||||||||||||||||||||||  | || ||||||| | ||||||| || || |||||||||||    
T  53070520 ttctgtaattgggcaactcgcgaggcgagagcctctactcgccatggcgagttcaggt-cagcttccaaaaagttcattctt-aattaatccaggttcaa 53070423  T
Q  128 tctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 189  Q
    |||||||||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  53070422 tctcattctacattctttcctaatcattattaaacatgttcaggcactcaaaagcatctaagg 53070360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 44 - 189
Target Start/End: Complemental strand, 12934117 - 12933971
Alignment:
Q  44 actcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatct 143  Q
    |||||||||||||  | |||| |||||||||||||||||||||  |  || ||||| | |||||| |||   |||||||||||||||||||||  |||||    
T  12934117 actcgcgaggcgagagtctctgctcgccatggcgagttcaggttcagttcacaaaatttcattctaaaatctttccaggttcaatctcattctctaatct 12934018  T
Q  144 tttctaatcattattacata-gttcaggcactcaaaaacctctaagg 189  Q
    || ||||||||||||| | | |||||||||||||||||| |||||||    
T  12934017 ttcctaatcattattagacatgttcaggcactcaaaaacatctaagg 12933971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 6 - 181
Target Start/End: Original strand, 16097605 - 16097782
Alignment:
Q  6 atcgcatttaacctaacaaaga-attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatcca 104  Q
    |||||||||||| |||  |||| ||| ||||||| | || ||||||||||||  |||||||||| |||||||||||||||||  || || ||||||| ||    
T  16097605 atcgcatttaacataaacaagacattttgtaactagttagctcgcgaggcgagagcctctactcaccatggcgagttcaggtccaattcacaaaaattca 16097704  T
Q  105 ttcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaac 181  Q
    |||| |||   || ||||||||||||||||||  ||||||| ||||| ||||||| | | |||||| |||||||||||    
T  16097705 ttctaaaatcttttcaggttcaatctcattctccaatctttcctaataattattagacatgttcagacactcaaaaac 16097782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 44 - 189
Target Start/End: Original strand, 32307983 - 32308128
Alignment:
Q  44 actcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattcc-aggttcaatctcattctagaatc 142  Q
    |||||||||||||  |||||| |||||||||||||||||||||  |  |||||||| || ||||| ||| | |||| |||||||||||||||||  ||||    
T  32307983 actcgcgaggcgagagcctctgctcgccatggcgagttcaggttcagttcccaaaattc-attct-aaagtcttcctaggttcaatctcattctccaatc 32308080  T
Q  143 ttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 189  Q
    ||| ||||||||||||| ||| |||||||||||||||| | |||||||    
T  32308081 tttcctaatcattattagatatgttcaggcactcaaaagcatctaagg 32308128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 93 - 200
Target Start/End: Complemental strand, 606049 - 605941
Alignment:
Q  93 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtc 191  Q
    |||||||||||||| ||||||| ||||||||||||||||| |||||||  ||  ||||||||||||| | |  ||||||||||||||| | ||||||||     
T  606049 cccaaaaatccatttttaaacttttccaggttcaatctcaatctagaaaattgcctaatcattattatacacattcaggcactcaaaatcatctaaggtt 605950  T
Q  192 caacttaag 200  Q
    |||||||||    
T  605949 caacttaag 605941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 37 - 179
Target Start/End: Complemental strand, 40213535 - 40213392
Alignment:
Q  37 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattct 136  Q
    |||||| |||||||||||||  |||||| |||||| ||||||||||||||   | |||||||| | ||||||  ||   |||||||||||||||||| ||    
T  40213535 ctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggttagattcccaaaagttcattctacaatctttccaggttcaatctcatcct 40213436  T
Q  137 agaatcttttctaatcattattacata-gttcaggcactcaaaa 179  Q
    | | ||||| ||||||||||||| | | ||||||||||||||||    
T  40213435 acattctttcctaatcattattagacatgttcaggcactcaaaa 40213392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 12 - 85
Target Start/End: Complemental strand, 37251005 - 37250932
Alignment:
Q  12 tttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcagg 85  Q
    ||||||||||||| |  ||||||||||||| ||||||||||||||  |||||||||||| ||||||||||||||    
T  37251005 tttaacctaacaaggtgttctgtaactgggcaactcgcgaggcgagagcctctactcgctatggcgagttcagg 37250932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 44 - 179
Target Start/End: Complemental strand, 49667890 - 49667754
Alignment:
Q  44 actcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatct 143  Q
    |||||||||||||  |||||| |||||||||||||||||||||  |  || ||| | | |||||| |||   |||||||||||||||||||||  |||||    
T  49667890 actcgcgaggcgagagcctctgctcgccatggcgagttcaggttcagttcacaatatttcattctaaaatctttccaggttcaatctcattctctaatct 49667791  T
Q  144 tttctaatcattattacata-gttcaggcactcaaaa 179  Q
    || ||||||||||||| | | |||||||| |||||||    
T  49667790 ttcctaatcattattagacatgttcaggcgctcaaaa 49667754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 49 - 189
Target Start/End: Original strand, 9513228 - 9513370
Alignment:
Q  49 cgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatc-cattcttaaactattccaggttcaatctcattctagaatcttttc 147  Q
    ||||||||  |||||| |||||||||| |||||||||| ||  || |||||||  |||||| |||   || ||||||||||||||||||  ||||||| |    
T  9513228 cgaggcgagagcctctgctcgccatggtgagttcaggtttagttcacaaaaatttcattctaaaatcttttcaggttcaatctcattctctaatctttcc 9513327  T
Q  148 taatcattattacata-gttcaggcactcaaaaacctctaagg 189  Q
    |||||||||||| | | |||||||||||||||| | |||||||    
T  9513328 taatcattattagacatgttcaggcactcaaaagcatctaagg 9513370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 49 - 189
Target Start/End: Original strand, 9521203 - 9521345
Alignment:
Q  49 cgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatc-cattcttaaactattccaggttcaatctcattctagaatcttttc 147  Q
    ||||||||  |||||| |||||||||| |||||||||| ||  || |||||||  |||||| |||   || ||||||||||||||||||  ||||||| |    
T  9521203 cgaggcgagagcctctgctcgccatggtgagttcaggtttagttcacaaaaatttcattctaaaatcttttcaggttcaatctcattctctaatctttcc 9521302  T
Q  148 taatcattattacata-gttcaggcactcaaaaacctctaagg 189  Q
    |||||||||||| | | |||||||||||||||| | |||||||    
T  9521303 taatcattattagacatgttcaggcactcaaaagcatctaagg 9521345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 15 - 178
Target Start/End: Original strand, 14572873 - 14573037
Alignment:
Q  15 aacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaa-aatccattcttaaac 113  Q
    |||||||||| | | |||||  || ||| |||||||||||||  ||||||||||||||||||||||||||||   | | |||||   | |||||| |  |    
T  14572873 aacctaacaaggtactctgtttctaggtcactcgcgaggcgagagcctctactcgccatggcgagttcaggtcagatttccaaaggtttcattctaagtc 14572972  T
Q  114 tattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaa 178  Q
    | |||||||||||||||||||||| | ||||| ||||||||||||| | | |||||||||||||||    
T  14572973 t-ttccaggttcaatctcattctacattctttcctaatcattattagacatgttcaggcactcaaa 14573037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 95 - 201
Target Start/End: Original strand, 23275106 - 23275213
Alignment:
Q  95 caaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattat--tacatagttcaggcactcaaaaacctctaaggtcc 192  Q
    |||||||||||| ||||||| | ||| ||||||||||| |||| || |||  |||||||||||  |||||| ||||||||||||||| | |||||||| |    
T  23275106 caaaaatccatttttaaactttcccaagttcaatctcaatctaaaaacttgcctaatcattattatacata-ttcaggcactcaaaatcatctaaggttc 23275204  T
Q  193 aacttaagg 201  Q
    |||||||||    
T  23275205 aacttaagg 23275213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 95 - 209
Target Start/End: Complemental strand, 23412929 - 23412814
Alignment:
Q  95 caaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattatta--catagttcaggcactcaaaaacctctaaggtcc 192  Q
    |||||||||||| ||||||| | |||||| |||||||| |||| || |||  ||||||||| |||  |||| ||||||||||||||| | |||||||| |    
T  23412929 caaaaatccatttttaaactttcccaggtccaatctcaatctaaaaacttgcctaatcatttttatacata-ttcaggcactcaaaatcatctaaggttc 23412831  T
Q  193 aacttaaggggcaaaac 209  Q
    |||||||||| ||||||    
T  23412830 aacttaagggacaaaac 23412814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 37 - 189
Target Start/End: Complemental strand, 25476199 - 25476046
Alignment:
Q  37 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattct 136  Q
    |||||| |||||||||||||  ||||||||||| | ||||||||||||||   | ||| |||  | |||||| |||   |||||||||| ||||||||||    
T  25476199 ctgggtcactcgcgaggcgagagcctctactcgtcgtggcgagttcaggtcagattccaaaagtttcattctaaaatctttccaggttcgatctcattct 25476100  T
Q  137 agaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 189  Q
    | | |||||  |||||||||||| | | ||||||| |||||||||| |||||||    
T  25476099 acattctttcataatcattattagacatgttcaggtactcaaaaacatctaagg 25476046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 93 - 201
Target Start/End: Original strand, 43927543 - 43927652
Alignment:
Q  93 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtc 191  Q
    |||||||||||||| ||||||| | |||||||||| |||| |||| || ||| |||||||||||||| | | |||||||||||||||| | ||||| ||     
T  43927543 cccaaaaatccatttttaaactttcccaggttcaaactcaatctaaaaacttgtctaatcattattatacatgttcaggcactcaaaatcatctaaagtt 43927642  T
Q  192 caacttaagg 201  Q
    | ||||||||    
T  43927643 cgacttaagg 43927652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 117 - 189
Target Start/End: Complemental strand, 49389378 - 49389305
Alignment:
Q  117 tccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 189  Q
    ||||||||||||||||||||  ||||||| ||||||||||||| | | |||||||||||||||||| |||||||    
T  49389378 tccaggttcaatctcattctccaatctttcctaatcattattagacatgttcaggcactcaaaaacatctaagg 49389305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 44 - 181
Target Start/End: Complemental strand, 1644489 - 1644352
Alignment:
Q  44 actcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattc-caggttcaatctcattctagaatc 142  Q
    |||||||||||||  |||||| |||||||||||||||||||||  |  || ||||| || ||||| ||| | ||| ||||||||||||||||||  ||||    
T  1644489 actcgcgaggcgagagcctctgctcgccatggcgagttcaggttcagttcacaaaattc-attct-aaagtcttctcaggttcaatctcattctctaatc 1644392  T
Q  143 ttttctaatcattattacata-gttcaggcactcaaaaac 181  Q
    ||| ||||||||||| | | | ||||||||||||||||||    
T  1644391 tttcctaatcattatcagacatgttcaggcactcaaaaac 1644352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 95 - 207
Target Start/End: Original strand, 14501564 - 14501677
Alignment:
Q  95 caaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattatta--catagttcaggcactcaaaaacctctaaggtcc 192  Q
    |||||||||||| ||||||  | |||||| |||||||| |||| || |||  |||||||||||||  |||| ||||||||||||||| | |||||||| |    
T  14501564 caaaaatccatttttaaaccttcccaggtccaatctcaatctaaaaccttgcctaatcattattatacata-ttcaggcactcaaaatcatctaaggttc 14501662  T
Q  193 aacttaaggggcaaa 207  Q
    |||||||||| ||||    
T  14501663 aacttaagggacaaa 14501677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 45 - 189
Target Start/End: Complemental strand, 11424569 - 11424424
Alignment:
Q  45 ctcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatc-cattcttaaactattccaggttcaatctcattctagaatct 143  Q
    ||||||||||||  ||||||||||||| ||||||||||||||   | | | |||| |  |||||| || || |||||||||||||||||||||| | | |    
T  11424569 ctcgcgaggcgagagcctctactcgccgtggcgagttcaggtcagagttcaaaaagtttcattctaaatct-ttccaggttcaatctcattctacattat 11424471  T
Q  144 tttctaatcattattacata-gttcaggcactcaaaaacctctaagg 189  Q
    || ||||||||||||| | | |||||||||||||||| | |||||||    
T  11424470 ttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 11424424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 12171955 - 12171869
Alignment:
Q  1 caagtatcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggt 86  Q
    |||| |||||||||||||||| ||| | ||||||||||| | ||  |||||||||||  |||||||||||||||||| |||||||||    
T  12171955 caagaatcgcatttaacctaaacaaggcattctgtaactagttagatcgcgaggcgagagcctctactcgccatggccagttcaggt 12171869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 116 - 196
Target Start/End: Original strand, 14179708 - 14179789
Alignment:
Q  116 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 196  Q
    ||||| |||||||||||||||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||| |||||    
T  14179708 ttccaagttcaatctcattctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaact 14179789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 93 - 190
Target Start/End: Original strand, 12378359 - 12378457
Alignment:
Q  93 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattat--tacatagttcaggcactcaaaaacctctaaggt 190  Q
    |||||||||||||| ||||||| | ||||||||||||||| |||| || | |  |||||||||||  |||||| ||||||||||||||| | ||||||||    
T  12378359 cccaaaaatccatttttaaactttcccaggttcaatctcaatctaaaaacatgcctaatcattattgtacata-ttcaggcactcaaaatcatctaaggt 12378457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 95 - 207
Target Start/End: Original strand, 45797608 - 45797721
Alignment:
Q  95 caaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattat--tacatagttcaggcactcaaaaacctctaaggtcc 192  Q
    |||||||||||| ||||||  | |||||| |||||||| |||| || |||  |||||||||||  |||||| ||||||||||||||| | ||||| || |    
T  45797608 caaaaatccatttttaaaccttcccaggtccaatctcaatctaaaaacttacctaatcattattatacata-ttcaggcactcaaaatcatctaaagttc 45797706  T
Q  193 aacttaaggggcaaa 207  Q
    |||||||||| ||||    
T  45797707 aacttaagggacaaa 45797721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 116 - 189
Target Start/End: Original strand, 18438920 - 18438994
Alignment:
Q  116 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 189  Q
    ||||||||||||||||||| || | ||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  18438920 ttccaggttcaatctcattttacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 18438994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 115 - 196
Target Start/End: Complemental strand, 20698183 - 20698101
Alignment:
Q  115 attccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 196  Q
    ||||||||||||||||||| ||| | ||||| ||||||||||||| | | |||||| ||||||||| | |||||||| |||||    
T  20698183 attccaggttcaatctcatcctacattctttcctaatcattattagacatgttcagacactcaaaagcatctaaggttcaact 20698101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 37 - 189
Target Start/End: Original strand, 26687193 - 26687347
Alignment:
Q  37 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatc-cattcttaaactattccaggttcaatctcattc 135  Q
    |||||| |||||||||||||  |||||| |||||| ||||||||||||||   | ||||| || |  ||||||  ||   |||||||||||||||||| |    
T  26687193 ctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttcattctacaatctttccaggttcaatctcatcc 26687292  T
Q  136 tagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 189  Q
    || | ||||| ||||||||||||| | | ||| |||||||||||| | |||||||    
T  26687293 tacattctttcctaatcattattagacatgtttaggcactcaaaagcatctaagg 26687347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 37 - 189
Target Start/End: Original strand, 14973161 - 14973314
Alignment:
Q  37 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattct 136  Q
    |||||| ||| |||||||||  |||||| |||||| ||||||||||||||   | | |||||| | | |||| |||   || | |||| |||||||||||    
T  14973161 ctgggtcacttgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaattccaaaagttctttctaaaatcttttctggtttaatctcattct 14973260  T
Q  137 agaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 189  Q
    | | ||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  14973261 acattctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 14973314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 159
Target Start/End: Complemental strand, 37250869 - 37250804
Alignment:
Q  94 ccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattatta 159  Q
    ||||||||||||| ||||||| | ||||||||||||||| |||| || |||  |||||||||||||    
T  37250869 ccaaaaatccatttttaaactttcccaggttcaatctcaatctaaaaacttgcctaatcattatta 37250804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 189
Target Start/End: Original strand, 16104168 - 16104240
Alignment:
Q  118 ccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 189  Q
    |||||||||| ||||||||  ||||||| ||||||||||||| | | ||||||||||||| |||| |||||||    
T  16104168 ccaggttcaacctcattctccaatctttcctaatcattattagacatgttcaggcactcagaaacatctaagg 16104240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 178
Target Start/End: Complemental strand, 14576568 - 14576505
Alignment:
Q  116 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaa 178  Q
    ||||||||||||| |||||||| | |||||||||||||| |||| | | |||||||||||||||    
T  14576568 ttccaggttcaatgtcattctacattcttttctaatcataattagacatgttcaggcactcaaa 14576505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 178
Target Start/End: Original strand, 17488243 - 17488306
Alignment:
Q  116 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaa 178  Q
    |||||||||||||||||| ||| | ||||| ||||||||||||| | | |||||||||||||||    
T  17488243 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaa 17488306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 178
Target Start/End: Original strand, 17499725 - 17499788
Alignment:
Q  116 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaa 178  Q
    |||||||||||||||||| ||| | ||||| ||||||||||||| | | |||||||||||||||    
T  17499725 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaa 17499788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 199
Target Start/End: Complemental strand, 22110033 - 22109926
Alignment:
Q  93 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtc 191  Q
    |||||||||||||| | ||||  |  ||||||||||||||  ||| || |||  ||||||||||||| | | |||||||||||||||||| ||||| ||     
T  22110033 cccaaaaatccattttcaaacactcacaggttcaatctcaaactaaaaacttgcctaatcattattatacatgttcaggcactcaaaaacatctaaagtt 22109934  T
Q  192 caacttaa 199  Q
    ||||||||    
T  22109933 caacttaa 22109926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 83
Target Start/End: Complemental strand, 606173 - 606135
Alignment:
Q  45 ctcgcgaggcgatggcctctactcgccatggcgagttca 83  Q
    |||||||||||| | ||||||||||||||||||||||||    
T  606173 ctcgcgaggcgaggacctctactcgccatggcgagttca 606135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 116 - 196
Target Start/End: Original strand, 12340138 - 12340219
Alignment:
Q  116 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 196  Q
    |||||||||||||||||| ||| | ||||| ||||||| ||||| | | |||||||||||||||  | |||||||| |||||    
T  12340138 ttccaggttcaatctcatcctacattctttcctaatcaatattagacatgttcaggcactcaaaggcatctaaggttcaact 12340219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 82
Target Start/End: Complemental strand, 13210133 - 13210096
Alignment:
Q  45 ctcgcgaggcgatggcctctactcgccatggcgagttc 82  Q
    ||||||||||||  ||||||||||||||||||||||||    
T  13210133 ctcgcgaggcgagagcctctactcgccatggcgagttc 13210096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 86
Target Start/End: Complemental strand, 20698251 - 20698202
Alignment:
Q  37 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggt 86  Q
    |||||| |||||||||||||  |||||| |||||| ||||||||||||||    
T  20698251 ctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 20698202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 179
Target Start/End: Original strand, 13442660 - 13442724
Alignment:
Q  116 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaa 179  Q
    |||||||||||||||||| ||| | | ||| ||||||||||||| | | ||||||||||||||||    
T  13442660 ttccaggttcaatctcatcctacattttttcctaatcattattagacatgttcaggcactcaaaa 13442724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 85
Target Start/End: Complemental strand, 22110156 - 22110116
Alignment:
Q  45 ctcgcgaggcgatggcctctactcgccatggcgagttcagg 85  Q
    ||||||||||||  |||||||||||| ||||||||||||||    
T  22110156 ctcgcgaggcgagagcctctactcgctatggcgagttcagg 22110116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 81
Target Start/End: Complemental strand, 23083176 - 23083132
Alignment:
Q  37 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagtt 81  Q
    |||||| | |||||||||||  |||||||||||||||||||||||    
T  23083176 ctgggtcattcgcgaggcgagagcctctactcgccatggcgagtt 23083132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 109; Significance: 6e-55; HSPs: 2)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 6 - 208
Target Start/End: Original strand, 6888 - 7092
Alignment:
Q  6 atcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatcca 104  Q
    |||||||||||||||| ||| | ||||| ||||||| || || ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  6888 atcgcatttaacctaaacaatgcattctataactggttagcttgcgaggcgagggcctctactcgccatggcgagttcaggtgtaattcccaaaaatcca 6987  T
Q  105 ttcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaacttaagggg 203  Q
    |||||||||||||||||||||||||| | |||| ||||||| |||||||| |||| | | ||| |||||||||||||| |||||||| |||||||| ||     
T  6988 ttcttaaactattccaggttcaatcttaatctataatctttcctaatcatcattatacatgtttaggcactcaaaaacatctaaggttcaacttaaaggt 7087  T
Q  204 caaaa 208  Q
    |||||    
T  7088 caaaa 7092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333; HSP #2
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 6 - 208
Target Start/End: Original strand, 14268 - 14472
Alignment:
Q  6 atcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatcca 104  Q
    |||||||||||||||| ||| | ||||| ||||||| || || ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  14268 atcgcatttaacctaaacaatgcattctataactggttagcttgcgaggcgagggcctctactcgccatggcgagttcaggtgtaattcccaaaaatcca 14367  T
Q  105 ttcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaacttaagggg 203  Q
    |||||||||||||||||||||||||| | |||| ||||||| |||||||| |||| | | ||| |||||||||||||| |||||||| |||||||| ||     
T  14368 ttcttaaactattccaggttcaatcttaatctataatctttcctaatcatcattatacatgtttaggcactcaaaaacatctaaggttcaacttaaaggt 14467  T
Q  204 caaaa 208  Q
    |||||    
T  14468 caaaa 14472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 108; Significance: 2e-54; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 10 - 196
Target Start/End: Original strand, 13220 - 13407
Alignment:
Q  10 catttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattctt 109  Q
    ||||||||||||||| | ||||||||||||| || |||||||||||| |||||||||||||||||||||||||||||| ||||| ||||||| |||||||    
T  13220 catttaacctaacaaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactcacaaaaattcattctt 13319  T
Q  110 aaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 196  Q
    ||||||||||||||||||||| | |||  ||||||| |||||||| |||| | | |||||||||||||||||| |||||||| |||||    
T  13320 aaactattccaggttcaatcttaatctccaatctttcctaatcataattagacatgttcaggcactcaaaaacatctaaggttcaact 13407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 107; Significance: 9e-54; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 6 - 212
Target Start/End: Original strand, 15099625 - 15099833
Alignment:
Q  6 atcgcatttaacctaacaaaga-attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatcca 104  Q
    ||||| ||||||||||  |||| ||||||||||||| || ||||||||||||  ||||||||||||||||||||||||||||| ||||| ||||||| ||    
T  15099625 atcgcttttaacctaaacaagacattctgtaactggttagctcgcgaggcgagagcctctactcgccatggcgagttcaggtgcaactcacaaaaattca 15099724  T
Q  105 ttcttaaactattccaggttcaatctcattctagaatcttttctaatcattat--tacatagttcaggcactcaaaaacctctaaggtccaacttaaggg 202  Q
    |||||||||||||||||||||||||||| |||| ||||||| |||||||| ||  |||| ||||||||||||||||||| |||||||| | |||||| ||    
T  15099725 ttcttaaactattccaggttcaatctcaatctacaatctttcctaatcatcatcataca-agttcaggcactcaaaaacatctaaggttcgacttaaagg 15099823  T
Q  203 gcaaaactac 212  Q
     |||||||||    
T  15099824 tcaaaactac 15099833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 6 - 208
Target Start/End: Complemental strand, 39706133 - 39705930
Alignment:
Q  6 atcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatcca 104  Q
    |||||||||||||||| ||||| |||||||||||||| |  ||||||||||| |||||||||||||||||||||||||||||||||||| | ||||| |     
T  39706133 atcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgtaactctc-aaaattcg 39706035  T
Q  105 ttcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaacttaagggg 203  Q
    |||||||||||||||||||||||||| | |||  ||||||| ||||||||||||| | | |||||||||||||||||| |||||||| |||||||| ||     
T  39706034 ttcttaaactattccaggttcaatcttaatcttcaatctttcctaatcattattagacatgttcaggcactcaaaaacatctaaggttcaacttaaaggt 39705935  T
Q  204 caaaa 208  Q
    |||||    
T  39705934 caaaa 39705930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 6 - 199
Target Start/End: Original strand, 15190592 - 15190787
Alignment:
Q  6 atcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatcca 104  Q
    ||||| |||||||||| ||| | ||||||||||||| || ||||||||||||  |||||||||||||||||||||| ||| |||||| ||||||||||||    
T  15190592 atcgcttttaacctaaacaaggcattctgtaactggttagctcgcgaggcgagagcctctactcgccatggcgagtacagatgtaacgcccaaaaatcca 15190691  T
Q  105 ttcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaacttaa 199  Q
    |||||||||||||||||||| ||||||| ||||||| ||||||||||||| |||| | | |||||||||||||||||| |||||||| | ||||||    
T  15190692 ttcttaaactattccaggttaaatctcaatctagaaccttttctaatcataattagacatgttcaggcactcaaaaacatctaaggttcgacttaa 15190787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 28 - 235
Target Start/End: Complemental strand, 52243016 - 52242811
Alignment:
Q  28 attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaa 127  Q
    |||||||||||||| ||||||||||||||  |||||||||||| |||||||||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  52243016 attctgtaactgggcaactcgcgaggcgagagcctctactcgctatggcgagttcaggtgtaactcccaacaatgcattcttaaactattccaggttcaa 52242917  T
Q  128 tctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaacttaaggggcaaaactactacgaaaccatgtc 226  Q
    |||||||||||||||||| || |||||||||| | | |||||||||||| ||| | |||||   ||||||||| |  ||||   ||||||||| |||||     
T  52242916 tctcattctagaatctttcctgatcattattatacatgttcaggcactcgaaatcatctaaataccaacttaaagatcaaa---actacgaaatcatgtt 52242820  T
Q  227 gactctctg 235  Q
    |||||||||    
T  52242819 gactctctg 52242811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 28 - 212
Target Start/End: Complemental strand, 15464752 - 15464567
Alignment:
Q  28 attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaa 127  Q
    |||||||||||||| ||||||||||||||  |||||||||||| |||| ||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  15464752 attctgtaactgggcaactcgcgaggcgagagcctctactcgctatggtgagttcaggtgtaacacccaaaaatccattcttaaactatttcaggttcaa 15464653  T
Q  128 tctcattctagaatcttttctaatcattat--tacatagttcaggcactcaaaaacctctaaggtccaacttaaggggcaaaactac 212  Q
    ||||| |||| ||||||| |||||||||||  |||||| ||||||||||||||| | |||||    ||||||||||| |||||||||    
T  15464652 tctcaatctaaaatctttcctaatcattattatacata-ttcaggcactcaaaatcatctaaatatcaacttaagggtcaaaactac 15464567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 59 - 212
Target Start/End: Complemental strand, 43198380 - 43198226
Alignment:
Q  59 gcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattatt 158  Q
    |||||||||||| |||| |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| |||| ||||||| ||||||||||||    
T  43198380 gcctctactcgctatggtgagttcaggtgtaactcccaaaaatcaattcttaaactattccatgttcaatctcaatctaaaatctttcctaatcattatt 43198281  T
Q  159 acata-gttcaggcactcaaaaacctctaaggtccaacttaaggggcaaaactac 212  Q
    ||| | |||||||||||||||||| ||||||||  |||||||||| |||||||||    
T  43198280 acacatgttcaggcactcaaaaacatctaaggtttaacttaagggtcaaaactac 43198226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 45 - 199
Target Start/End: Original strand, 13844854 - 13845009
Alignment:
Q  45 ctcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatctt 144  Q
    ||||||||||||  |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| |||||   |||||||||||    
T  13844854 ctcgcgaggcgagagcctctactcgccatggcaagtacaggtgtaactcccaaaaatccattcttaaactattccaggttaaatcttgatctagaatctt 13844953  T
Q  145 ttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaacttaa 199  Q
    |||||||||| |||| | | |||||| ||||||||||| |||||||| ||||||||    
T  13844954 ttctaatcataattagacatgttcagacactcaaaaacatctaaggttcaacttaa 13845009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 6 - 188
Target Start/End: Original strand, 8846649 - 8846834
Alignment:
Q  6 atcgcatttaacctaacaaaga-attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactc-ccaaaaatcc 103  Q
    |||||||||||| |||  |||| ||||||||||| | || ||||||||||||  ||||||||||||||||||||||| ||||| ||||| | |||||| |    
T  8846649 atcgcatttaacataaacaagacattctgtaactagttagctcgcgaggcgagagcctctactcgccatggcgagttaaggtgcaactcacaaaaaattc 8846748  T
Q  104 attcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaag 188  Q
    ||||| |||   |||||||||||||||||||||  ||||||| ||||||||||||| | | ||||||| |||||||||| ||||||    
T  8846749 attctaaaatctttccaggttcaatctcattctccaatctttcctaatcattattagacatgttcaggtactcaaaaacatctaag 8846834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 28 - 181
Target Start/End: Complemental strand, 44928746 - 44928592
Alignment:
Q  28 attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaa 127  Q
    ||||||||||||||| |||||||||||||  |||||| ||||||||||||||||| |||   | |||||||  | |||||| |||   ||||||||||||    
T  44928746 attctgtaactgggtcactcgcgaggcgagagcctctgctcgccatggcgagttctggtcagattcccaaagtttcattctaaaatctttccaggttcaa 44928647  T
Q  128 tctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaac 181  Q
    |||||||||| | ||||| ||||||||||||| ||| ||||||||||||||||||    
T  44928646 tctcattctacattctttcctaatcattattagatatgttcaggcactcaaaaac 44928592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 95 - 212
Target Start/End: Complemental strand, 15868391 - 15868273
Alignment:
Q  95 caaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattat--tacatagttcaggcactcaaaaacctctaaggtcc 192  Q
    |||||||| ||| ||||||| | ||||||||||||||| |||| || |||| |||||||||||  |||||| ||||||||||||||| | |||||||| |    
T  15868391 caaaaatctatttttaaactttcccaggttcaatctcaatctaaaaactttcctaatcattattatacata-ttcaggcactcaaaatcatctaaggttc 15868293  T
Q  193 aacttaaggggcaaaactac 212  Q
    |||||||||| |||||||||    
T  15868292 aacttaagggacaaaactac 15868273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 44 - 189
Target Start/End: Original strand, 12774313 - 12774458
Alignment:
Q  44 actcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactat-tccaggttcaatctcattctagaatc 142  Q
    |||||||||||||  |||||| |||||||||||||||||||||  |  || ||||| || ||||| ||  | | ||||||||||||||||||||  ||||    
T  12774313 actcgcgaggcgagagcctctgctcgccatggcgagttcaggttcagttcacaaaattc-attct-aacgtctctccaggttcaatctcattctccaatc 12774410  T
Q  143 ttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 189  Q
    ||||||||||||||||| | | |||||||||||||||||| |||||||    
T  12774411 ttttctaatcattattagacatgttcaggcactcaaaaacatctaagg 12774458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 29 - 189
Target Start/End: Complemental strand, 21815124 - 21814964
Alignment:
Q  29 ttctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaa-tccattcttaaactattccaggttcaa 127  Q
    |||||||| |||| ||||||||||||||  ||||||||||||||||||||||||| ||  | || ||||||| | ||||||| || || ||||||||||     
T  21815124 ttctgtaattgggcaactcgcgaggcgagagcctctactcgccatggcgagttcaagt-cagcttccaaaaagttcattctt-aattaatccaggttcat 21815027  T
Q  128 tctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 189  Q
    | |||||||| | ||||| ||||||||||||| | | |||||| ||||||||| | |||||||    
T  21815026 tatcattctaaattctttcctaatcattattaaacatgttcagacactcaaaagcatctaagg 21814964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 29 - 189
Target Start/End: Complemental strand, 21815453 - 21815293
Alignment:
Q  29 ttctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaa-tccattcttaaactattccaggttcaa 127  Q
    |||||||| |||| ||||||||||||||  ||||||||||||||||||||||||||||  | || ||||||| | ||||||| || || ||||||||||     
T  21815453 ttctgtaattgggcaactcgcgaggcgagagcctctactcgccatggcgagttcaggt-cagcttccaaaaagttcattctt-aattaatccaggttcat 21815356  T
Q  128 tctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 189  Q
    | |||||||| | | ||| ||||||||||||| | | |||||| ||||||||| | |||||||    
T  21815355 tatcattctaaattatttcctaatcattattaaacatgttcagacactcaaaagcatctaagg 21815293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 29 - 189
Target Start/End: Complemental strand, 21818546 - 21818386
Alignment:
Q  29 ttctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaa-tccattcttaaactattccaggttcaa 127  Q
    |||||||| |||| ||||||||||||||  ||||||||||||||||||||||||| ||  | || ||||||| | ||||||| || || ||||||||||     
T  21818546 ttctgtaattgggcaactcgcgaggcgagagcctctactcgccatggcgagttcaagt-cagcttccaaaaagttcattctt-aattaatccaggttcat 21818449  T
Q  128 tctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 189  Q
    | |||||||| | ||||| ||||||||||||| | | |||||| ||||||||| | |||||||    
T  21818448 tatcattctaaattctttcctaatcattattaaacatgttcagacactcaaaagcatctaagg 21818386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 95 - 207
Target Start/End: Original strand, 32851816 - 32851929
Alignment:
Q  95 caaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattat--tacatagttcaggcactcaaaaacctctaaggtcc 192  Q
    |||||||||||| ||||||  | |||||| |||||||| |||| || ||| ||||||||||||  |||||| ||||||||||||||| | |||||||| |    
T  32851816 caaaaatccatttttaaaccttcccaggtccaatctcaatctaaaaacttgtctaatcattattatacata-ttcaggcactcaaaatcatctaaggttc 32851914  T
Q  193 aacttaaggggcaaa 207  Q
    |||||||||| ||||    
T  32851915 aacttaagggacaaa 32851929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 93 - 208
Target Start/End: Complemental strand, 13532 - 13415
Alignment:
Q  93 cccaaaaatccattctt-aaactattccaggttcaatctcattctagaatcttttctaatcattattaca-tagttcaggcactcaaaaacctctaaggt 190  Q
    |||||||||||||| || ||||| | ||||||||||||||| |||| || |||  ||||||||||||| | | |||||||||||||||| | ||||| ||    
T  13532 cccaaaaatccattttttaaactttcccaggttcaatctcaatctaaaaacttgcctaatcattattatacttgttcaggcactcaaaatcatctaaagt 13433  T
Q  191 ccaacttaaggggcaaaa 208  Q
     ||||||||||| |||||    
T  13432 tcaacttaagggtcaaaa 13415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 116 - 190
Target Start/End: Original strand, 16597031 - 16597106
Alignment:
Q  116 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggt 190  Q
    |||||||||||||||||||||| | ||||| ||||||||||||| | | |||||||||||||||| | ||||||||    
T  16597031 ttccaggttcaatctcattctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggt 16597106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 115 - 190
Target Start/End: Original strand, 3097017 - 3097093
Alignment:
Q  115 attccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggt 190  Q
    ||||||||||||||||||| ||| | ||||| ||||||||||||| | | |||||||||||| ||||| ||||||||    
T  3097017 attccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcgaaaacatctaaggt 3097093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 37 - 159
Target Start/End: Original strand, 15091203 - 15091326
Alignment:
Q  37 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaa-atccattcttaaactattccaggttcaatctcattc 135  Q
    |||||| |||||||||||||  |||||| |||||| ||||||||||||||   | | ||||||  | |||||| |||   ||||||||||||||||||||    
T  15091203 ctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagatttccaaaagtttcattctaaaatccttccaggttcaatctcattc 15091302  T
Q  136 tagaatcttttctaatcattatta 159  Q
    || | ||||| ||||||| |||||    
T  15091303 tacattctttcctaatcaatatta 15091326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 93 - 159
Target Start/End: Complemental strand, 12287891 - 12287825
Alignment:
Q  93 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattatta 159  Q
    |||||||||||||| ||||||| | ||||||||||||||| |||| || |||  |||||||||||||    
T  12287891 cccaaaaatccatttttaaactttcccaggttcaatctcaatctaaaaacttgcctaatcattatta 12287825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 37 - 189
Target Start/End: Original strand, 14038955 - 14039109
Alignment:
Q  37 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatc-cattcttaaactattccaggttcaatctcattc 135  Q
    |||||| |||||||||||||  |||||| |||||| |||||||||| |||   | | |||||| |  |||||| |||   ||| ||||||||||||||||    
T  14038955 ctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttctggtcagatttccaaaagtttcattctaaaatctttctaggttcaatctcattc 14039054  T
Q  136 tagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 189  Q
    || | ||||| | ||||||||||| | | |||||||||||||||| | |||||||    
T  14039055 tacattctttccaaatcattattagacatgttcaggcactcaaaagcatctaagg 14039109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 28 - 86
Target Start/End: Original strand, 44102508 - 44102566
Alignment:
Q  28 attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggt 86  Q
    ||||||||| | ||| |||||||||||||  |||||| |||||||||||||||||||||    
T  44102508 attctgtaaataggtcactcgcgaggcgagagcctctgctcgccatggcgagttcaggt 44102566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 159
Target Start/End: Complemental strand, 53081854 - 53081789
Alignment:
Q  94 ccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattatta 159  Q
    ||||||||||||| ||||||| ||||||||||||||||| |||| || |||   ||||||||||||    
T  53081854 ccaaaaatccatttttaaacttttccaggttcaatctcaatctaaaaacttgcttaatcattatta 53081789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 84
Target Start/End: Complemental strand, 13656 - 13616
Alignment:
Q  44 actcgcgaggcgatggcctctactcgccatggcgagttcag 84  Q
    ||||||||||||| ||||||||||||| |||||||||||||    
T  13656 actcgcgaggcgagggcctctactcgctatggcgagttcag 13616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 115 - 178
Target Start/End: Original strand, 12903131 - 12903195
Alignment:
Q  115 attccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaa 178  Q
    ||||||||||||||||||| ||| | ||||| ||||||||||||| | | |||||||||||||||    
T  12903131 attccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaa 12903195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 115 - 196
Target Start/End: Complemental strand, 14053049 - 14052967
Alignment:
Q  115 attccaggttcaatctcattctagaatcttttctaatcattatt--acatagttcaggcactcaaaaacctctaaggtccaact 196  Q
    |||||| |||||||||||| ||| | ||||| ||||||||||||  ||||| ||||||||||||||| | |||||||| |||||    
T  14053049 attccaagttcaatctcatcctacattctttcctaatcattattagacata-ttcaggcactcaaaagcatctaaggttcaact 14052967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 86
Target Start/End: Original strand, 7089185 - 7089232
Alignment:
Q  39 gggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggt 86  Q
    |||| |||||||||||||  |||||| |||||||||||||||||||||    
T  7089185 gggtcactcgcgaggcgagagcctctgctcgccatggcgagttcaggt 7089232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 189
Target Start/End: Complemental strand, 16239728 - 16239653
Alignment:
Q  116 ttccaggttcaatctcattctaga-atcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 189  Q
    |||||||||||||||||||||| |  ||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  16239728 ttccaggttcaatctcattctacatttctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 16239653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 86
Target Start/End: Complemental strand, 17047885 - 17047838
Alignment:
Q  39 gggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggt 86  Q
    |||| |||||||||||||  |||||| |||||||||||||||||||||    
T  17047885 gggtcactcgcgaggcgagagcctctgctcgccatggcgagttcaggt 17047838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 189
Target Start/End: Original strand, 6190819 - 6190893
Alignment:
Q  116 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 189  Q
    |||||||||||||||||| ||| | ||| | ||||||||||||| | | |||||||||||||||| | |||||||    
T  6190819 ttccaggttcaatctcatcctacattctctcctaatcattattaaacatgttcaggcactcaaaagcatctaagg 6190893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 176
Target Start/End: Original strand, 7089251 - 7089313
Alignment:
Q  115 attccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactca 176  Q
    ||||||||||||||||||| ||| | ||||| ||||||||||||| | | |||||||||||||    
T  7089251 attccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactca 7089313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 86
Target Start/End: Original strand, 3096949 - 3096998
Alignment:
Q  37 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggt 86  Q
    |||||| |||||||||||||  |||||| |||||| ||||||||||||||    
T  3096949 ctgggtcactcgcgaggcgagagcctctgctcgccttggcgagttcaggt 3096998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 86
Target Start/End: Original strand, 7799003 - 7799052
Alignment:
Q  37 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggt 86  Q
    |||||| |||||||||||||  |||||| |||||| ||||||||||||||    
T  7799003 ctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 7799052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 86
Target Start/End: Original strand, 12903063 - 12903112
Alignment:
Q  37 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggt 86  Q
    |||||| ||||||||||||   ||||||||||||| ||||||||||||||    
T  12903063 ctgggtcactcgcgaggcgggagcctctactcgccgtggcgagttcaggt 12903112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 116 - 196
Target Start/End: Original strand, 15552199 - 15552280
Alignment:
Q  116 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 196  Q
    |||||||| ||||||||| ||| | ||||| ||||||||||||| | | |||||||||||||||| | | |||||| |||||    
T  15552199 ttccaggtccaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatataaggttcaact 15552280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 116 - 196
Target Start/End: Original strand, 24029127 - 24029208
Alignment:
Q  116 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 196  Q
    |||||||||||||||||| ||| | |||||  |||||| ||||| | | ||||||||||||||| || |||||||| |||||    
T  24029127 ttccaggttcaatctcatcctacattctttcataatcaatattagacatgttcaggcactcaaagacatctaaggttcaact 24029208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 105; Significance: 1e-52; HSPs: 2)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 45 - 196
Target Start/End: Complemental strand, 43590 - 43438
Alignment:
Q  45 ctcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatctt 144  Q
    ||||||||||||  ||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  43590 ctcgcgaggcgagagcctctactcgtcatggcgagtacaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcaatctagaatctt 43491  T
Q  145 ttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 196  Q
    |||||||||| |||| | | |||||||||||||||||| |||||||| |||||    
T  43490 ttctaatcataattagacatgttcaggcactcaaaaacatctaaggttcaact 43438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #2
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 45 - 196
Target Start/End: Complemental strand, 47510 - 47358
Alignment:
Q  45 ctcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatctt 144  Q
    ||||||||||||  ||||||||||| |||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  47510 ctcgcgaggcgagagcctctactcgtcatggctagtacaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcaatctagaatctt 47411  T
Q  145 ttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 196  Q
    |||||||||| |||| | | |||||||||||||||||| |||||||| |||||    
T  47410 ttctaatcataattagacatgttcaggcactcaaaaacatctaaggttcaact 47358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 105; Significance: 1e-52; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 28 - 199
Target Start/End: Complemental strand, 15653 - 15481
Alignment:
Q  28 attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaa 127  Q
    ||||||||||||| || |||||||||||| |||||||||||||||||||||||||| |||||| ||| ||||||||||||||||||||||||||||||||    
T  15653 attctgtaactggttagctcgcgaggcgagggcctctactcgccatggcgagttcatgtgtaattccgaaaaatccattcttaaactattccaggttcaa 15554  T
Q  128 tctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaacttaa 199  Q
    ||||| |||| ||||||| |||||||| |||| | | ||| |||||||||||||| |||||||| ||||||||    
T  15553 tctcaatctataatctttcctaatcatcattatacatgtttaggcactcaaaaacatctaaggttcaacttaa 15481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 103; Significance: 2e-51; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 6 - 212
Target Start/End: Original strand, 39834107 - 39834315
Alignment:
Q  6 atcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatcca 104  Q
    |||||||||||| ||| ||| | ||||||||| |||||| ||||||||||||  ||||||||||||||||||||||||||||| ||||| |||| || ||    
T  39834107 atcgcatttaacttaaacaaggtattctgtaaatgggtagctcgcgaggcgagagcctctactcgccatggcgagttcaggtgcaactcacaaagattca 39834206  T
Q  105 ttcttaaactattccaggttcaatctcattctagaatcttttctaatcattat--tacatagttcaggcactcaaaaacctctaaggtccaacttaaggg 202  Q
    |||||||||||||||||||||||||||| |||| ||||||| |||||||||||  |||| |||| |||||||||||||| |||||||| | |||||| ||    
T  39834207 ttcttaaactattccaggttcaatctcaatctacaatctttcctaatcattatcataca-agtttaggcactcaaaaacatctaaggttcgacttaaagg 39834305  T
Q  203 gcaaaactac 212  Q
     |||||||||    
T  39834306 tcaaaactac 39834315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 6 - 208
Target Start/End: Original strand, 6520644 - 6520847
Alignment:
Q  6 atcgcatttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccat 105  Q
    ||||||||||||||||||||| ||||||||| |||| |  | ||||||||| ||||||||||||||||||||| ||||||| |||||| |||||||||||    
T  6520644 atcgcatttaacctaacaaagcattctgtaattgggcagtttgcgaggcgagggcctctactcgccatggcgaattcaggtctaactctcaaaaatccat 6520743  T
Q  106 tcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaacttaaggggc 204  Q
    |||||||||||| |||||||| ||| | |||  ||||||| ||||| ||||||| | | |||||| ||||||||||| |||||||| |||||||| || |    
T  6520744 tcttaaactatttcaggttcagtcttaatctccaatctttcctaattattattagacatgttcagacactcaaaaacatctaaggttcaacttaaaggtc 6520843  T
Q  205 aaaa 208  Q
    ||||    
T  6520844 aaaa 6520847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 12 - 208
Target Start/End: Complemental strand, 38855090 - 38854893
Alignment:
Q  12 tttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattctta 110  Q
    |||||||||| ||| | |||||||||||||| || ||||||||||| |||||||||||||||||||||||||||||||||||| | ||||| | ||||||    
T  38855090 tttaacctaagcaaggcattctgtaactgggcaattcgcgaggcgagggcctctactcgccatggcgagttcaggtgtaactctc-aaaattcgttctta 38854992  T
Q  111 aactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaacttaaggggcaaaa 208  Q
    |||||||||||||| ||||| | |||  ||||||| ||||||||||||| | | |||||||||||||||||| |||||||| |||||||| || |||||    
T  38854991 aactattccaggttaaatcttaatctccaatctttcctaatcattattagacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaaa 38854893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 6 - 121
Target Start/End: Original strand, 21285874 - 21285989
Alignment:
Q  6 atcgcatttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccat 105  Q
    ||||||||||||||||||||| |||||||||||||| |||| ||||||||| |||||||||||||||| ||||||||||||||||||||||||||| |||    
T  21285874 atcgcatttaacctaacaaagcattctgtaactgggcaacttgcgaggcgagggcctctactcgccatagcgagttcaggtgtaactcccaaaaattcat 21285973  T
Q  106 tcttaaactattccag 121  Q
    ||||||||||||||||    
T  21285974 tcttaaactattccag 21285989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 6 - 181
Target Start/End: Original strand, 21673980 - 21674157
Alignment:
Q  6 atcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatcca 104  Q
    |||||||||| ||||| ||| | ||||||||||  |  || ||||||||||| |||||||||||||||||||||||||||||| ||||| |||| || ||    
T  21673980 atcgcatttatcctaaacaaggcattctgtaacaagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactcacaaatattca 21674079  T
Q  105 ttcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaac 181  Q
    |||| |||   |||||||||||||||||||||  ||||||| ||||||||||||| | | ||||||||||||||||||    
T  21674080 ttctaaaatctttccaggttcaatctcattctccaatctttcctaatcattattagacatgttcaggcactcaaaaac 21674157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 44 - 176
Target Start/End: Complemental strand, 19801234 - 19801101
Alignment:
Q  44 actcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatct 143  Q
    ||||||||||||| | ||||||||||||||||||||||||||| ||||||||| || | | |||||||||||||||||||||||||| |||||  | |||    
T  19801234 actcgcgaggcgaggacctctactcgccatggcgagttcaggtataactcccacaagttcgttcttaaactattccaggttcaatcttattctctagtct 19801135  T
Q  144 tttctaatcattattacata-gttcaggcactca 176  Q
    || ||||||||||||| | | |||||||||||||    
T  19801134 ttcctaatcattattagacatgttcaggcactca 19801101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 6 - 181
Target Start/End: Complemental strand, 23760685 - 23760509
Alignment:
Q  6 atcgcatttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccat 105  Q
    |||||||||| |||||||| | ||| ||||||| |  || ||||||||||| |||||||||||||| |||| ||||||||| ||||||||| || | | |    
T  23760685 atcgcatttatcctaacaaggcattttgtaactagtcaattcgcgaggcgagggcctctactcgccttggcaagttcaggtataactcccacaagttcgt 23760586  T
Q  106 tcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaac 181  Q
    ||||||||||||||||||||||||||| | |  ||| ||| ||||||||||||| | | ||||||| ||||||||||    
T  23760585 tcttaaactattccaggttcaatctcaatatccaatatttcctaatcattattagacatgttcaggaactcaaaaac 23760509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 28 - 189
Target Start/End: Original strand, 41598482 - 41598644
Alignment:
Q  28 attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaa 127  Q
    ||||||||||| ||| |||||||||||||  |||||| |||||||||||||||||||||   | |||||||  | |||||| |||   ||||||||||||    
T  41598482 attctgtaactaggtcactcgcgaggcgagagcctctgctcgccatggcgagttcaggtcagattcccaaagtttcattctaaaatctttccaggttcaa 41598581  T
Q  128 tctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 189  Q
    |||||||||| | |||||  |||||||||||| | | |||||||||||||||| | |||||||    
T  41598582 tctcattctacattctttcataatcattattagacatgttcaggcactcaaaagcatctaagg 41598644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 6 - 181
Target Start/End: Complemental strand, 26355544 - 26355367
Alignment:
Q  6 atcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatcca 104  Q
    |||||||||||| ||| ||| | ||||||||||| | || |||| |||||||  |||||||||||||||||| |||||||||  || || ||||||| ||    
T  26355544 atcgcatttaacataaacaaggcattctgtaactagttagctcgtgaggcgagagcctctactcgccatggcaagttcaggtacaattcacaaaaattca 26355445  T
Q  105 ttcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaac 181  Q
    |||| ||    ||||||||||||||||| |||  ||||| | ||||||||||||| | | ||||||||||||||||||    
T  26355444 ttctaaagtctttccaggttcaatctcaatcttcaatctctcctaatcattattagacatgttcaggcactcaaaaac 26355367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 95 - 202
Target Start/End: Complemental strand, 13507765 - 13507657
Alignment:
Q  95 caaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattat--tacatagttcaggcactcaaaaacctctaaggtcc 192  Q
    |||||||||||| ||||||| | ||||||||| ||||| |||| || ||| ||||||||||||  |||||| ||||||||||||||| | |||||||| |    
T  13507765 caaaaatccatttttaaactttcccaggttcagtctcaatctaaaaacttgtctaatcattattatacata-ttcaggcactcaaaatcatctaaggttc 13507667  T
Q  193 aacttaaggg 202  Q
    ||||||||||    
T  13507666 aacttaaggg 13507657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 95 - 202
Target Start/End: Complemental strand, 13597297 - 13597189
Alignment:
Q  95 caaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattat--tacatagttcaggcactcaaaaacctctaaggtcc 192  Q
    |||||||||||| ||||||| | ||||||||| ||||| |||| || ||| ||||||||||||  |||||| ||||||||||||||| | |||||||| |    
T  13597297 caaaaatccatttttaaactttcccaggttcagtctcaatctaaaaacttgtctaatcattattatacata-ttcaggcactcaaaatcatctaaggttc 13597199  T
Q  193 aacttaaggg 202  Q
    ||||||||||    
T  13597198 aacttaaggg 13597189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 94 - 212
Target Start/End: Original strand, 20499024 - 20499143
Alignment:
Q  94 ccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtcc 192  Q
    ||||||||||||| ||||||| |  |||||||||||||| |||| || |||  ||||||||||||| | | |||||||||||||||| | ||||| || |    
T  20499024 ccaaaaatccatttttaaactttctcaggttcaatctcaatctaaaaacttacctaatcattattatacatgttcaggcactcaaaatcatctaaagttc 20499123  T
Q  193 aacttaaggggcaaaactac 212  Q
    |||| ||||| |||||||||    
T  20499124 aactcaagggtcaaaactac 20499143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 37 - 159
Target Start/End: Original strand, 22875372 - 22875494
Alignment:
Q  37 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattct 136  Q
    |||||| |||||||||||||  |||||| |||| ||||||||||||||||   | |||||||  | |||||| |||   |||||||||||| ||| ||||    
T  22875372 ctgggtcactcgcgaggcgagagcctctgctcgtcatggcgagttcaggtcagattcccaaagtttcattctaaaatctttccaggttcaacctcgttct 22875471  T
Q  137 agaatcttttctaatcattatta 159  Q
    | ||||||| |||||||||||||    
T  22875472 acaatctttcctaatcattatta 22875494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 37 - 196
Target Start/End: Original strand, 20536514 - 20536675
Alignment:
Q  37 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactccca-aaaatccattcttaaactattccaggttcaatctcattc 135  Q
    |||||| |||||||||||||  ||||||||||||| ||||||||||||||   | ||||| ||  | ||||||  ||   |||||||||||||||||| |    
T  20536514 ctgggtcactcgcgaggcgagagcctctactcgccgtggcgagttcaggtcagaatcccataagtttcattctacaatctttccaggttcaatctcatcc 20536613  T
Q  136 tagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 196  Q
    || | ||||| ||||||||||| | | | |||||||||||||||| | |||||||| |||||    
T  20536614 tacattctttcctaatcattatcagacatgttcaggcactcaaaagcatctaaggttcaact 20536675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 199
Target Start/End: Original strand, 21491382 - 21491462
Alignment:
Q  120 aggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaacttaa 199  Q
    |||||||||||||||||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||| ||||||||    
T  21491382 aggttcaatctcattctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaacttaa 21491462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 189
Target Start/End: Original strand, 23406665 - 23406841
Alignment:
Q  15 aacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactccca-aaaatccattcttaaac 113  Q
    |||||||||| | | |||||  |||||| |||||||||||||  ||||||||||||| ||||||||||||||   | ||||| ||  | ||||||  ||     
T  23406665 aacctaacaaggcactctgtttctgggtcactcgcgaggcgagagcctctactcgccgtggcgagttcaggtcagaatcccacaagtttcattctacaat 23406764  T
Q  114 tattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 189  Q
      |||||||| ||||||||| ||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  23406765 ctttccaggtccaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 23406841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 119 - 196
Target Start/End: Complemental strand, 5866009 - 5865931
Alignment:
Q  119 caggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 196  Q
    ||||||||||||||||||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||| |||||    
T  5866009 caggttcaatctcattctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaact 5865931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 37 - 189
Target Start/End: Original strand, 6759563 - 6759717
Alignment:
Q  37 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatc-cattcttaaactattccaggttcaatctcattc 135  Q
    |||||| |||||||||||||  |||||| |||||| ||||||||||||||   | | |||||| |  |||||| |||   ||||| ||||||||||||||    
T  6759563 ctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagatttccaaaagtttcattctaaaatatttccaagttcaatctcattc 6759662  T
Q  136 tagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 189  Q
    || | ||||| ||||||||||||| | | ||||| |||||||||| | |||||||    
T  6759663 tacattctttcctaatcattattagacatgttcaagcactcaaaagcatctaagg 6759717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 119 - 196
Target Start/End: Original strand, 17141302 - 17141380
Alignment:
Q  119 caggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 196  Q
    ||||||||||||||||||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||| |||||    
T  17141302 caggttcaatctcattctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaact 17141380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 115 - 190
Target Start/End: Complemental strand, 45130767 - 45130691
Alignment:
Q  115 attccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggt 190  Q
    ||||||||||||||||||| ||| | ||||| ||||||||||||| | | |||||||||||||||| | ||||||||    
T  45130767 attccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggt 45130691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 93 - 201
Target Start/End: Complemental strand, 17266674 - 17266565
Alignment:
Q  93 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattat--tacatagttcaggcactcaaaaacctctaaggt 190  Q
    |||||||||||||| ||||||| |   ||||||||||||| |||| || |||  |||||||||||  |||||| ||||||||||||||||| ||||| ||    
T  17266674 cccaaaaatccatttttaaactttcgtaggttcaatctcaatctaaaaacttgcctaatcattattatacata-ttcaggcactcaaaaacatctaaagt 17266576  T
Q  191 ccaacttaagg 201  Q
     | ||||||||    
T  17266575 tcgacttaagg 17266565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 116 - 189
Target Start/End: Complemental strand, 18878972 - 18878898
Alignment:
Q  116 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 189  Q
    |||||||||||||||||| ||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  18878972 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 18878898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 201
Target Start/End: Complemental strand, 983084 - 982975
Alignment:
Q  93 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtc 191  Q
    |||||||||||||| ||||||| |  |||||||||||||| |||| || |||| ||||||| || || | | |||||| ||||||||| | ||||| ||     
T  983084 cccaaaaatccatttttaaactttctcaggttcaatctcaatctaaaaactttcctaatcactaatatacatgttcagacactcaaaatcatctaaagtt 982985  T
Q  192 caacttaagg 201  Q
    ||||||||||    
T  982984 caacttaagg 982975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 179
Target Start/End: Complemental strand, 17439187 - 17439100
Alignment:
Q  93 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattat--tacatagttcaggcactcaaaa 179  Q
    |||||||||||||| ||||||| | |||||||||||| || |||| || |||  |||||||||||  |||||| |||||||||||||||    
T  17439187 cccaaaaatccatttttaaactttcccaggttcaatcccaatctaaaaacttgcctaatcattattgtacata-ttcaggcactcaaaa 17439100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 164 - 235
Target Start/End: Original strand, 21286656 - 21286724
Alignment:
Q  164 gttcaggcactcaaaaacctctaaggtccaacttaaggggcaaaactactacgaaaccatgtcgactctctg 235  Q
    ||||||||||| |||||| |||||||| ||||||||||| ||||   ||||||||| ||||| |||||||||    
T  21286656 gttcaggcacttaaaaacatctaaggttcaacttaagggtcaaa---actacgaaatcatgttgactctctg 21286724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 116 - 196
Target Start/End: Complemental strand, 21918745 - 21918664
Alignment:
Q  116 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 196  Q
    |||||||||||||||| | ||| | ||||||||||||||||||| | | |||||||||||| ||| | |||||||| |||||    
T  21918745 ttccaggttcaatctcttcctacattcttttctaatcattattagacatgttcaggcactccaaagcatctaaggttcaact 21918664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 179
Target Start/End: Original strand, 24353463 - 24353550
Alignment:
Q  93 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattat--tacatagttcaggcactcaaaa 179  Q
    ||||||||||||||  |||||| | ||||||||||||||| |||| || |||  |||||||||||  |||||| |||||||||||||||    
T  24353463 cccaaaaatccatttataaactttcccaggttcaatctcaatctaaaaacttgcctaatcattattatacata-ttcaggcactcaaaa 24353550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 190
Target Start/End: Complemental strand, 21415049 - 21414887
Alignment:
Q  29 ttctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaat 128  Q
    |||||||| |||  ||||||||||||||  | |||||||||||||||||||||  |||  ||  | ||  | |||||| | || ||| |||  |||||||    
T  21415049 ttctgtaattggacaactcgcgaggcgagaggctctactcgccatggcgagttagggtaaaatactcaccattccattttgaagctaatccgagttcaat 21414950  T
Q  129 ctcattctagaatcttttctaatcatta--ttacatagttcaggcactcaaaaacctctaaggt 190  Q
    ||||||||| ||||||| ||||||||||   | |||  ||||||||||||||||| ||||||||    
T  21414949 ctcattctacaatctttcctaatcattagtgtgcat-cttcaggcactcaaaaacatctaaggt 21414887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 189
Target Start/End: Original strand, 7373135 - 7373209
Alignment:
Q  116 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 189  Q
    ||||||||||||| |||| ||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  7373135 ttccaggttcaatttcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 7373209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 189
Target Start/End: Complemental strand, 18818145 - 18818071
Alignment:
Q  116 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 189  Q
    |||||||||||||||||| ||| | | ||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  18818145 ttccaggttcaatctcatcctacattttttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 18818071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 86
Target Start/End: Complemental strand, 21918808 - 21918766
Alignment:
Q  44 actcgcgaggcgatggcctctactcgccatggcgagttcaggt 86  Q
    |||||||||||||  |||||| |||||||||||||||||||||    
T  21918808 actcgcgaggcgagagcctctgctcgccatggcgagttcaggt 21918766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 189
Target Start/End: Original strand, 22627125 - 22627195
Alignment:
Q  120 aggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 189  Q
    |||||||||||||| ||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  22627125 aggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 22627195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 196
Target Start/End: Original strand, 31971629 - 31971711
Alignment:
Q  115 attccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 196  Q
    ||||||||||||||||||| ||| |  |||| ||||||||||||| | | |||||||||| ||||| | |||||||| |||||    
T  31971629 attccaggttcaatctcatcctacatcctttcctaatcattattagacatgttcaggcacacaaaagcatctaaggttcaact 31971711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 86
Target Start/End: Complemental strand, 18818224 - 18818175
Alignment:
Q  37 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggt 86  Q
    |||||| |||||||||||||  |||||| |||||| ||||||||||||||    
T  18818224 ctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 18818175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 116 - 196
Target Start/End: Original strand, 21255605 - 21255686
Alignment:
Q  116 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 196  Q
    |||||||||||||||||| ||| | ||||| ||||||||||||| | | |||  ||||||||||| | |||||||| |||||    
T  21255605 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgtttgggcactcaaaagcatctaaggttcaact 21255686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 179
Target Start/End: Original strand, 37116787 - 37116874
Alignment:
Q  93 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattat--tacatagttcaggcactcaaaa 179  Q
    |||||||||||||| ||| ||| |  |||||||||||||| |||| || |||  |||||||||||  |||||| |||||||||||||||    
T  37116787 cccaaaaatccatttttatactttctcaggttcaatctcaatctaaaaacttgcctaatcattattatacata-ttcaggcactcaaaa 37116874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 159
Target Start/End: Complemental strand, 25362887 - 25362843
Alignment:
Q  115 attccaggttcaatctcattctagaatcttttctaatcattatta 159  Q
    ||||||||||||||||||| ||| | ||||| |||||||||||||    
T  25362887 attccaggttcaatctcatcctacattctttcctaatcattatta 25362843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 85
Target Start/End: Original strand, 37116664 - 37116704
Alignment:
Q  45 ctcgcgaggcgatggcctctactcgccatggcgagttcagg 85  Q
    ||||||||||||  |||||||||||| ||||||||||||||    
T  37116664 ctcgcgaggcgagagcctctactcgctatggcgagttcagg 37116704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 98; Significance: 2e-48; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 28 - 212
Target Start/End: Complemental strand, 23708441 - 23708257
Alignment:
Q  28 attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaa 127  Q
    |||||||||||||||||||||| ||||||  |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| | |||||    
T  23708441 attctgtaactgggtaactcgcaaggcgagagcctctactcgctatggcgagttcaggtgtaactcccaaaaatccattcttaaactattcc-gattcaa 23708343  T
Q  128 tctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaacttaaggggcaaaactac 212  Q
    ||||| ||||  | |||| |||||||||| |||||| |||||| ||||||||||| ||||| |  ||||| ||||| |||||||||    
T  23708342 tctcaatctacgaactttcctaatcattaatacatatgttcagacactcaaaaacatctaaagatcaactcaagggtcaaaactac 23708257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 28 - 196
Target Start/End: Original strand, 25176140 - 25176309
Alignment:
Q  28 attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaa 127  Q
    |||||||||||| | |  ||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||||  |||||||||||||||||||||||    
T  25176140 attctgtaactgcgcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtctaactctcaaaaatctgttcttaaactattccaggttcaa 25176239  T
Q  128 tctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 196  Q
    ||||| |||  || |||| |||||||| |||| | | |||||||||||||||||| |||||||| |||||    
T  25176240 tctcaatctccaacctttcctaatcataattagacatgttcaggcactcaaaaacatctaaggttcaact 25176309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 15 - 199
Target Start/End: Original strand, 23076726 - 23076910
Alignment:
Q  15 aacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaact 114  Q
    |||||||||| | | |||||  ||||||||||||||||||||  ||||||||||||| ||||||||||||||   | | |||||  | |||||| || ||    
T  23076726 aacctaacaaggcactctgtttctgggtaactcgcgaggcgagagcctctactcgccgtggcgagttcaggtcagaattccaaagtttcattctaaatct 23076825  T
Q  115 attccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaacttaa 199  Q
     |||||||| ||||||||| ||| | ||||| ||||| ||||||| | | |||||||||||||||| | |||||||  ||||||||    
T  23076826 -ttccaggtccaatctcatcctacattctttcctaattattattagacatgttcaggcactcaaaagcatctaaggatcaacttaa 23076910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 15 - 189
Target Start/End: Original strand, 23660307 - 23660482
Alignment:
Q  15 aacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaact 114  Q
    |||||||||| | | |||||  |||||| |||| ||||||||  |||||| |||||| ||||||||||||||   | ||| |||  | |||||| |||      
T  23660307 aacctaacaaggcactctgtttctgggtcactcacgaggcgagagcctctgctcgccgtggcgagttcaggtcagattccaaaagtttcattctaaaatc 23660406  T
Q  115 attccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 189  Q
     |||||||||||||||||||||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  23660407 tttccaggttcaatctcattctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 23660482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 37 - 189
Target Start/End: Complemental strand, 298629 - 298476
Alignment:
Q  37 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatc-cattcttaaactattccaggttcaatctcattc 135  Q
    |||||| |||||||||||||  ||||||||||||| ||||||||||||||   | ||||| || |  |||||| || || |||||||||||||||||| |    
T  298629 ctgggtcactcgcgaggcgagagcctctactcgccgtggcgagttcaggtcagaatcccacaagtttcattctaaatct-ttccaggttcaatctcatcc 298531  T
Q  136 tagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 189  Q
    || | ||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  298530 tatattctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 298476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 10 - 85
Target Start/End: Original strand, 23207559 - 23207634
Alignment:
Q  10 catttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcagg 85  Q
    ||||||||||||||| |  ||||||||||||| ||||||| ||||||  |||||||||||| ||||||||||||||    
T  23207559 catttaacctaacaaggtgttctgtaactgggcaactcgcaaggcgagagcctctactcgctatggcgagttcagg 23207634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 48 - 179
Target Start/End: Original strand, 28406297 - 28406429
Alignment:
Q  48 gcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttc 147  Q
    |||||||||  ||||||||||||||||||||||||||||  |  || ||||| |  ||||| |||   || ||||||||||||||||||  ||||||| |    
T  28406297 gcgaggcgagagcctctactcgccatggcgagttcaggttcagttcacaaaattttattctaaaatctttacaggttcaatctcattctccaatctttcc 28406396  T
Q  148 taatcattattacata-gttcaggcactcaaaa 179  Q
    |||| ||||||| | | ||||||||||||||||    
T  28406397 taattattattagacatgttcaggcactcaaaa 28406429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 119 - 196
Target Start/End: Complemental strand, 23071695 - 23071617
Alignment:
Q  119 caggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 196  Q
    ||||||||||||||||||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||| |||||    
T  23071695 caggttcaatctcattctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaact 23071617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 93 - 212
Target Start/End: Complemental strand, 18786566 - 18786446
Alignment:
Q  93 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtc 191  Q
    |||||||||||||| ||||||| |  |||||||||||||| |||| || |||  ||||||| || || |   |||||||||||||||| | ||||| ||     
T  18786566 cccaaaaatccatttttaaactttctcaggttcaatctcaatctaaaaacttgcctaatcaataatatacgtgttcaggcactcaaaatcatctaaagtt 18786467  T
Q  192 caacttaaggggcaaaactac 212  Q
    ||||||||||| |||||||||    
T  18786466 caacttaagggtcaaaactac 18786446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 37 - 159
Target Start/End: Original strand, 22337422 - 22337544
Alignment:
Q  37 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggt-gtaactcccaaaaatccattcttaaactattccaggttcaatctcattc 135  Q
    |||||| |||||||||||||  ||||||||||||| |||||| |||||||   |||||  |||  | |||||| || || |||||||||||||||||| |    
T  22337422 ctgggtcactcgcgaggcgagagcctctactcgccgtggcgaattcaggtcagaactcaaaaagtttcattctaaatct-ttccaggttcaatctcatcc 22337520  T
Q  136 tagaatcttttctaatcattatta 159  Q
    || | ||||| |||||||||||||    
T  22337521 tacattctttcctaatcattatta 22337544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 120 - 189
Target Start/End: Complemental strand, 22133948 - 22133878
Alignment:
Q  120 aggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 189  Q
    |||||||||||||||||  ||||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  22133948 aggttcaatctcattctccaatctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 22133878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 93 - 176
Target Start/End: Complemental strand, 22412817 - 22412733
Alignment:
Q  93 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattat--tacatagttcaggcactca 176  Q
    |||||||||||||| ||||||| | ||||||||||||||| |||| || |||  |||||||||||  ||||| |||||||||||||    
T  22412817 cccaaaaatccatttttaaactttcccaggttcaatctcaatctaaaaacttgcctaatcattatcatacat-gttcaggcactca 22412733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 116 - 189
Target Start/End: Complemental strand, 22730968 - 22730894
Alignment:
Q  116 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 189  Q
    |||||||||||||||||| ||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  22730968 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 22730894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 120 - 189
Target Start/End: Complemental strand, 22737911 - 22737841
Alignment:
Q  120 aggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 189  Q
    |||||||||||||| ||| | ||||| ||||||||||||| ||| |||||||||||||||| | |||||||    
T  22737911 aggttcaatctcatcctacattctttcctaatcattattagatatgttcaggcactcaaaagcatctaagg 22737841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 115 - 196
Target Start/End: Complemental strand, 23654146 - 23654064
Alignment:
Q  115 attccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 196  Q
    ||||||||||||||||||| ||| | ||||| ||||||||||||| | | ||||||||| |||||| | |||||||| |||||    
T  23654146 attccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcagtcaaaagcatctaaggttcaact 23654064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 85
Target Start/End: Complemental strand, 22412953 - 22412900
Alignment:
Q  32 tgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcagg 85  Q
    |||||||||| ||||| ||||||||  |||||||||||| ||||||||||||||    
T  22412953 tgtaactgggcaactcacgaggcgagagcctctactcgctatggcgagttcagg 22412900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 176
Target Start/End: Original strand, 23207717 - 23207801
Alignment:
Q  93 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactca 176  Q
    |||||||||||||| ||||||| | | ||||||||||||| |||| || |||  ||||||||||||| | | |||||||||||||    
T  23207717 cccaaaaatccatttttaaactttcctaggttcaatctcaatctaaaaacttgcctaatcattattatacatgttcaggcactca 23207801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 196
Target Start/End: Original strand, 23286235 - 23286317
Alignment:
Q  115 attccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 196  Q
    |||||| |||||||||||| ||| | ||||| ||||||||||||| | | |||||| ||||||||| | |||||||| |||||    
T  23286235 attccatgttcaatctcatcctacattctttcctaatcattattagacatgttcagacactcaaaagcatctaaggttcaact 23286317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 189
Target Start/End: Original strand, 27753961 - 27754035
Alignment:
Q  116 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 189  Q
    |||||||||||||||||| ||| | ||||| ||||||||||||| | | ||| |||||||||||| | |||||||    
T  27753961 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttgaggcactcaaaagcatctaagg 27754035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 189
Target Start/End: Complemental strand, 32451744 - 32451590
Alignment:
Q  37 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactccca-aaaatccattcttaaactattccaggttcaatctcattc 135  Q
    |||||| |||||||||||||  |||||| |||||| ||||||||||||||   | ||||| ||  | ||||||  ||   ||||| |||||||||||| |    
T  32451744 ctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttcattctacaatctttccatgttcaatctcatcc 32451645  T
Q  136 tagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 189  Q
    || | ||| | ||||||||||||| | | |||||||||||||||| | |||||||    
T  32451644 tacattctctcctaatcattattaaacatgttcaggcactcaaaagcatctaagg 32451590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 115 - 190
Target Start/End: Complemental strand, 37863 - 37787
Alignment:
Q  115 attccaggttcaatctcattctagaatcttttc-taatcattattacata-gttcaggcactcaaaaacctctaaggt 190  Q
    ||||||||||||||||||| ||| | ||||||| |||||||||||| | | |||||||||||||||| | ||||||||    
T  37863 attccaggttcaatctcatcctaca-tcttttcctaatcattattagacatgttcaggcactcaaaagcatctaaggt 37787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 85
Target Start/End: Complemental strand, 20520014 - 20519957
Alignment:
Q  28 attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcagg 85  Q
    ||||||||||| || ||||||||||||||  |||||||| ||| ||||||| ||||||    
T  20520014 attctgtaactaggcaactcgcgaggcgagagcctctacacgctatggcgacttcagg 20519957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 159
Target Start/End: Original strand, 20309479 - 20309523
Alignment:
Q  115 attccaggttcaatctcattctagaatcttttctaatcattatta 159  Q
    ||||||||||||||||||| ||| | ||||| |||||||||||||    
T  20309479 attccaggttcaatctcatcctacattctttcctaatcattatta 20309523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 176
Target Start/End: Complemental strand, 20519874 - 20519790
Alignment:
Q  93 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactca 176  Q
    |||||||||||||| || |||| | ||| ||||||||||| |||| || |||  ||||||||||||| | | |||||||||||||    
T  20519874 cccaaaaatccattttttaactttcccatgttcaatctcaatctaaaaacttgcctaatcattattatacatgttcaggcactca 20519790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 81
Target Start/End: Original strand, 31756232 - 31756268
Alignment:
Q  45 ctcgcgaggcgatggcctctactcgccatggcgagtt 81  Q
    ||||||||||||  |||||||||||||||||||||||    
T  31756232 ctcgcgaggcgagagcctctactcgccatggcgagtt 31756268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 94; Significance: 5e-46; HSPs: 3)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 6 - 181
Target Start/End: Original strand, 130182 - 130359
Alignment:
Q  6 atcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatcca 104  Q
    |||||||||| ||||| ||| | ||| ||||||| | || ||||||||||||  |||||| |||||||||||||||| |||||||| |||||||||||||    
T  130182 atcgcatttatcctaaacaaggcattttgtaactagttagctcgcgaggcgagagcctctgctcgccatggcgagtttaggtgtaattcccaaaaatcca 130281  T
Q  105 ttcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaac 181  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||| | || | | ||||||||||||||||||    
T  130282 ttcttaaactattccaggttcaatctcaatctagaatcttttctaatcataactagacatgttcaggcactcaaaaac 130359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 28 - 85
Target Start/End: Complemental strand, 60536 - 60479
Alignment:
Q  28 attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcagg 85  Q
    |||||||||||||| ||||||||||||||  |||||||||||| ||||||||||||||    
T  60536 attctgtaactgggaaactcgcgaggcgagagcctctactcgctatggcgagttcagg 60479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 176
Target Start/End: Complemental strand, 60396 - 60312
Alignment:
Q  93 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactca 176  Q
    |||||||||||||| ||||||| | ||| ||||||||||| |||| || |||  ||||||||||||| | | |||||||||||||    
T  60396 cccaaaaatccatttttaaactttcccatgttcaatctcaatctaaaaacttgcctaatcattattatacatgttcaggcactca 60312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0810 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold0810
Description:

Target: scaffold0810; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 6 - 189
Target Start/End: Original strand, 3207 - 3392
Alignment:
Q  6 atcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatcca 104  Q
    |||||||||||||||| ||| | ||||||||||| |  || || |||||||| ||||||||||||||||||||||||||||| ||||||||| || | |     
T  3207 atcgcatttaacctaaacaaggcattctgtaactagtcaattcacgaggcgagggcctctactcgccatggcgagttcaggtataactcccacaagttcg 3306  T
Q  105 ttcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 189  Q
    |||||||||||||||||||||||||||| |||  ||||||| ||||||||||||| | | |||||||||||||||||| |||||||    
T  3307 ttcttaaactattccaggttcaatctcaatctccaatctttcctaatcattattagacatgttcaggcactcaaaaacatctaagg 3392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 87; Significance: 8e-42; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 6 - 212
Target Start/End: Complemental strand, 28194294 - 28194086
Alignment:
Q  6 atcgcatttaacctaacaaaga-attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatcca 104  Q
    ||||||| ||||||||  |||| ||| ||||| |||||| ||||||||||||  ||||||||| ||||||||||||||||||| ||||| |||| || ||    
T  28194294 atcgcatgtaacctaaacaagacattttgtaaatgggtagctcgcgaggcgagagcctctacttgccatggcgagttcaggtgcaactcacaaagattca 28194195  T
Q  105 ttcttaaactattccaggttcaatctcattctagaatcttttctaatcattat--tacatagttcaggcactcaaaaacctctaaggtccaacttaaggg 202  Q
    ||||||||||||| |||||||||||||| |||| ||||||| |||||||| ||  |||| ||||||||||||||||||| || ||||| | |||||| ||    
T  28194194 ttcttaaactatttcaggttcaatctcaatctacaatctttcctaatcatcatcataca-agttcaggcactcaaaaacatccaaggttcgacttaaagg 28194096  T
Q  203 gcaaaactac 212  Q
     |||||||||    
T  28194095 tcaaaactac 28194086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 6 - 196
Target Start/End: Complemental strand, 22921713 - 22921521
Alignment:
Q  6 atcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatcca 104  Q
    ||||||||||||| || ||| | ||||||||||| || |  |||||||||||  ||||||||||||||||||||||||| || |||||| ||||||| |     
T  22921713 atcgcatttaacccaaacaaggcattctgtaactaggcagttcgcgaggcgagagcctctactcgccatggcgagttcaagtctaactctcaaaaattcg 22921614  T
Q  105 ttcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 196  Q
    ||||||||||||||| |||||||||||| |||  ||||||| ||||||||||||| | | |||||||||||||||||| |||||||| |||||    
T  22921613 ttcttaaactattcctggttcaatctcaatctccaatctttcctaatcattattagacatgttcaggcactcaaaaacatctaaggttcaact 22921521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 6 - 189
Target Start/End: Complemental strand, 52927826 - 52927642
Alignment:
Q  6 atcgcatttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccat 105  Q
    ||||||||||||||||||| | |||||||||||||  || ||||||||||| ||||||||||||||||||||||||||||| |||||   |||||| |||    
T  52927826 atcgcatttaacctaacaaggcattctgtaactggtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggtctaactttaaaaaattcat 52927727  T
Q  106 tcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 189  Q
    ||  |||   |||||||||||||||||||||  |||||||  |||||||||||| | | |||||||||||||||||| |||||||    
T  52927726 tccaaaatctttccaggttcaatctcattctccaatctttcataatcattattagacatgttcaggcactcaaaaacatctaagg 52927642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 6 - 189
Target Start/End: Original strand, 33681284 - 33681469
Alignment:
Q  6 atcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatcca 104  Q
    |||||||||||| ||| ||| | | ||||||||||||||| |||||||||||  |||||| |||||||||||||||||||||| ||||| ||||||| ||    
T  33681284 atcgcatttaacataagcaaggcactctgtaactgggtaattcgcgaggcgagagcctctgctcgccatggcgagttcaggtgcaactcacaaaaattca 33681383  T
Q  105 ttcttaaactattccaggttcaatctcattctagaatcttttctaatcattatt--acatagttcaggcactcaaaaacctctaagg 189  Q
    |||| |||   |||||||||||||||||||||  ||||||| ||||||||||||  ||||| |||||| |||||||||| |||||||    
T  33681384 ttctaaaatctttccaggttcaatctcattctccaatctttcctaatcattattagacata-ttcaggaactcaaaaacatctaagg 33681469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 6 - 212
Target Start/End: Complemental strand, 35981532 - 35981325
Alignment:
Q  6 atcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatcca 104  Q
    ||||| |||||||||| ||| | ||||||||||| | || ||||||||||||  |||||||||| |||||||||||||||||| ||||| || |||| |     
T  35981532 atcgcttttaacctaaacaaggcattctgtaactagttagctcgcgaggcgagagcctctactcaccatggcgagttcaggtgcaactcacataaattcg 35981433  T
Q  105 ttcttaaactattccaggttcaatctcattctagaatcttttctaatcattat--tacatagttcaggcactcaaaaacctctaaggtccaacttaaggg 202  Q
    |||||||||||| ||||||||||||||| |||| ||||||| |||||||| ||  |||| ||||||||||||||||||| || ||||| | |||||| ||    
T  35981432 ttcttaaactatcccaggttcaatctcaatctacaatctttcctaatcatcatcataca-agttcaggcactcaaaaacatc-aaggttcgacttaaagg 35981335  T
Q  203 gcaaaactac 212  Q
     |||||||||    
T  35981334 tcaaaactac 35981325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 6 - 159
Target Start/End: Original strand, 20637125 - 20637279
Alignment:
Q  6 atcgcatttaacctaacaaaga-attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatcca 104  Q
    ||||| ||||||||||  |||| ||||||||||||  || ||||||||||||  ||||||||||||||||||||||||||||| ||||| ||||||| |     
T  20637125 atcgcttttaacctaaacaagacattctgtaactgattagctcgcgaggcgagagcctctactcgccatggcgagttcaggtgcaactcacaaaaattcg 20637224  T
Q  105 ttcttaaactattccaggttcaatctcattctagaatcttttctaatcattatta 159  Q
    |||||||||||||||||||||||||| | |||  ||||||| |||||||| ||||    
T  20637225 ttcttaaactattccaggttcaatcttaatctccaatctttcctaatcatcatta 20637279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 82 - 199
Target Start/End: Original strand, 43697712 - 43697830
Alignment:
Q  82 caggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaa 180  Q
    |||||||||||||| |||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| | || | | |||||||||||||||||    
T  43697712 caggtgtaactcccgaaaatccattcttaaactattccaggttaaatctcaatctagaatcttttctaatcataaatagacatgttcaggcactcaaaaa 43697811  T
Q  181 cctctaaggtccaacttaa 199  Q
    | |||||||| ||||||||    
T  43697812 catctaaggttcaacttaa 43697830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 20248547 - 20248734
Alignment:
Q  1 caagtatcgcatttaacctaacaaaga-attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaa 99  Q
    |||| ||||||||||||||||  |||  ||||||||||| | || ||||||||||||| ||||||||||||||||||||||||||||  |  || |||||    
T  20248547 caagaatcgcatttaacctaaataaggcattctgtaactagttagctcgcgaggcgatagcctctactcgccatggcgagttcaggttcagttcacaaaa 20248646  T
Q  100 atccattcttaaactat-tccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctcta 186  Q
    || ||||| |||| | | ||||||||||||||||||||   |||||| ||||||||||||| | | |||||||||||||||||| ||||    
T  20248647 attcattc-taaagtctctccaggttcaatctcattctccgatctttcctaatcattattagacatgttcaggcactcaaaaacatcta 20248734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 6 - 189
Target Start/End: Original strand, 22237905 - 22238089
Alignment:
Q  6 atcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatcca 104  Q
    |||||||||||||||| ||| | ||||||||||| |  || ||||||||||| |||||||||||||||||||||||||| ||| ||||| ||||| || |    
T  22237905 atcgcatttaacctaaacaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaagtgcaactcacaaaattc-a 22238003  T
Q  105 ttcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 189  Q
    |||  |||   ||||||||| |||||||||||  ||||||| |||| |||||||| | | |||||||||||||||||  |||||||    
T  22238004 ttccaaaatctttccaggtttaatctcattctccaatctttcctaaccattattagacatgttcaggcactcaaaaatatctaagg 22238089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 35 - 189
Target Start/End: Original strand, 433312 - 433467
Alignment:
Q  35 aactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcatt 134  Q
    |||||||| |||||||||||||  |||||| |||||||||||||||||||||   | |||||||  | |||||| |||   |||||||||||||||||||    
T  433312 aactgggtcactcgcgaggcgagagcctctgctcgccatggcgagttcaggtcagattcccaaagtttcattctaaaatctttccaggttcaatctcatt 433411  T
Q  135 ctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 189  Q
    ||| | ||||| |||||||||| || | | |||||| ||||||||| | |||||||    
T  433412 ctacattctttcctaatcattaatagacatgttcagacactcaaaagcatctaagg 433467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 44 - 189
Target Start/End: Original strand, 21754350 - 21754495
Alignment:
Q  44 actcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattcc-aggttcaatctcattctagaatc 142  Q
    |||||||||||||  |||||| |||||||||||||||||||||  |  || ||||| || ||||| ||| | |||| |||||||||||| ||||  ||||    
T  21754350 actcgcgaggcgagagcctctgctcgccatggcgagttcaggttcagttcacaaaattc-attct-aaagtcttcccaggttcaatctctttctccaatc 21754447  T
Q  143 ttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 189  Q
    ||| ||||||||||||| | | |||||||||||||||||| |||||||    
T  21754448 tttcctaatcattattagacatgttcaggcactcaaaaacatctaagg 21754495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 37 - 178
Target Start/End: Complemental strand, 50210027 - 50209885
Alignment:
Q  37 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatc-cattcttaaactattccaggttcaatctcattc 135  Q
    |||||| |||||||||||||  |||||| |||||| ||||||||||||||   | | |||||| |  |||||| || || ||||||||||||||||||||    
T  50210027 ctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaattccaaaagtttcattctaaatct-ttccaggttcaatctcattc 50209929  T
Q  136 tagaatcttttctaatcattattacata-gttcaggcactcaaa 178  Q
    || | ||||| ||||||||||||| | | |||||||||||||||    
T  50209928 tacattctttcctaatcattattagacatgttcaggcactcaaa 50209885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 212
Target Start/End: Complemental strand, 21861250 - 21861132
Alignment:
Q  95 caaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattaca-tagttcaggcactcaaaaacctctaaggtcca 193  Q
    |||||||||||| ||||||| | ||||||||||||||| |||| || |||  ||||||||||||| | | ||||||||||||| || | ||||| |  ||    
T  21861250 caaaaatccatttttaaactttcccaggttcaatctcaatctaaaaacttgcctaatcattattatacttgttcaggcactcagaatcatctaaagatca 21861151  T
Q  194 acttaaggggcaaaactac 212  Q
    ||||||||| |||||||||    
T  21861150 acttaagggtcaaaactac 21861132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 28 - 85
Target Start/End: Original strand, 26065238 - 26065295
Alignment:
Q  28 attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcagg 85  Q
    |||||||||||||| ||||||||||||||  |||||||||||| ||||||||||||||    
T  26065238 attctgtaactgggcaactcgcgaggcgagagcctctactcgctatggcgagttcagg 26065295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 37 - 188
Target Start/End: Original strand, 34510087 - 34510239
Alignment:
Q  37 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattct 136  Q
    |||||| ||||| |||||||  |||||| |||||| ||||||||||||||   | | |||||| | ||||||  ||   |||||||||||||||||| ||    
T  34510087 ctgggtcactcgtgaggcgagagcctctgctcgccgtggcgagttcaggtcagatttccaaaagttcattctacaatctttccaggttcaatctcatcct 34510186  T
Q  137 agaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaag 188  Q
    | | ||||| ||||||||||||| | | |||||||||||||||| | ||||||    
T  34510187 acattctttcctaatcattattagacatgttcaggcactcaaaagcatctaag 34510239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 95 - 212
Target Start/End: Complemental strand, 21895989 - 21895870
Alignment:
Q  95 caaaaatccattctt-aaactattccaggttcaatctcattctagaatcttttctaatcattattaca-tagttcaggcactcaaaaacctctaaggtcc 192  Q
    |||||||||||| || ||||| | ||||||||||||||| |||| || |||| ||||||||||||| | | ||||||||||||| || | ||||| |  |    
T  21895989 caaaaatccattttttaaactttcccaggttcaatctcaatctaaaaactttcctaatcattattatacttgttcaggcactcataatcatctaaagatc 21895890  T
Q  193 aacttaaggggcaaaactac 212  Q
    |||||||||| |||||||||    
T  21895889 aacttaagggtcaaaactac 21895870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 95 - 212
Target Start/End: Original strand, 16759091 - 16759209
Alignment:
Q  95 caaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtcca 193  Q
    |||||||||||  ||||||| |  |||||||||||||| |||| || |||  ||||||||||||| |   ||| |||||||||||||| |||||||| |     
T  16759091 caaaaatccatctttaaactttctcaggttcaatctcaatctaaaaacttgcctaatcattattatacgtgtttaggcactcaaaaacatctaaggttcg 16759190  T
Q  194 acttaaggggcaaaactac 212  Q
    ||||||||| |||||||||    
T  16759191 acttaagggtcaaaactac 16759209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 115 - 196
Target Start/End: Complemental strand, 22355921 - 22355839
Alignment:
Q  115 attccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 196  Q
    ||||||||||||||||||| ||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||| |||||    
T  22355921 attccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaact 22355839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 115 - 196
Target Start/End: Complemental strand, 22357607 - 22357525
Alignment:
Q  115 attccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 196  Q
    ||||||||||||||||||| ||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||| |||||    
T  22357607 attccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaact 22357525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 95 - 212
Target Start/End: Original strand, 21342513 - 21342631
Alignment:
Q  95 caaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattatta--catagttcaggcactcaaaaacctctaaggtcc 192  Q
    |||||||||||| | ||| | | ||||||||| ||||| |||| || |||  |||||||||||||  |||| ||||| ||||||||| | |||||||| |    
T  21342513 caaaaatccattttaaaattttcccaggttcattctcaatctaaaaacttgcctaatcattattatacata-ttcagacactcaaaatcatctaaggttc 21342611  T
Q  193 aacttaaggggcaaaactac 212  Q
    |||||||||| |||||||||    
T  21342612 aacttaagggtcaaaactac 21342631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 95 - 212
Target Start/End: Original strand, 21347378 - 21347496
Alignment:
Q  95 caaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattatta--catagttcaggcactcaaaaacctctaaggtcc 192  Q
    |||||||||||| | ||| | | ||||||||| ||||| |||| || |||  |||||||||||||  |||| ||||| ||||||||| | |||||||| |    
T  21347378 caaaaatccattttaaaattttcccaggttcattctcaatctaaaaacttgcctaatcattattatacata-ttcagacactcaaaatcatctaaggttc 21347476  T
Q  193 aacttaaggggcaaaactac 212  Q
    |||||||||| |||||||||    
T  21347477 aacttaagggtcaaaactac 21347496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 38 - 189
Target Start/End: Original strand, 22532577 - 22532729
Alignment:
Q  38 tgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattcta 137  Q
    ||||| |||||||||||||  |||||| ||| || ||||||||||| ||   | | |||||| | ||||||  ||   |||||||||||||||||| |||    
T  22532577 tgggtcactcgcgaggcgagagcctctgctcaccgtggcgagttcaagtcagatttccaaaagttcattctacaatccttccaggttcaatctcatccta 22532676  T
Q  138 gaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 189  Q
     | ||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  22532677 cattctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 22532729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 93 - 176
Target Start/End: Original strand, 26065357 - 26065441
Alignment:
Q  93 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactca 176  Q
    |||||||||||||| ||||||| | ||||||||||||||| |||| || |||  ||||||||||||| | | |||||||||||||    
T  26065357 cccaaaaatccatttttaaactttcccaggttcaatctcaatctaaaaacttgcctaatcattattatacatgttcaggcactca 26065441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 115 - 196
Target Start/End: Complemental strand, 27250476 - 27250394
Alignment:
Q  115 attccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 196  Q
    ||||||||||||||| ||| ||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||| |||||    
T  27250476 attccaggttcaatcccatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaact 27250394  T

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Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 35260898 - 35260852
Alignment:
Q  32 tgtaactgggtaactcgcgaggcgatggcctctactcgccatggcga 78  Q
    |||||||||| |||||||||||||| ||||||||||||| |||||||    
T  35260898 tgtaactgggaaactcgcgaggcgagggcctctactcgctatggcga 35260852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 79
Target Start/End: Original strand, 49261616 - 49261690
Alignment:
Q  6 atcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgag 79  Q
    ||||| |||||||||| ||| | ||||||||||||| || ||||||||||||  ||||||| |||||||||||||    
T  49261616 atcgcttttaacctaaacaaggcattctgtaactggttagctcgcgaggcgagagcctctattcgccatggcgag 49261690  T

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Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 93 - 159
Target Start/End: Original strand, 50687031 - 50687097
Alignment:
Q  93 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattatta 159  Q
    |||||||||||||| ||||||| | ||||||||||||||| |||| || |||  |||||||||||||    
T  50687031 cccaaaaatccatttttaaactttcccaggttcaatctcaatctaaaaacttgcctaatcattatta 50687097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 179
Target Start/End: Complemental strand, 16367968 - 16367881
Alignment:
Q  93 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattat--tacatagttcaggcactcaaaa 179  Q
    |||||||||||||  ||||||| ||||||||||| ||||| |||| || |||  |||||||||||  |||||| |||||||||||||||    
T  16367968 cccaaaaatccatctttaaacttttccaggttcattctcaatctaaaaacttgcctaatcattattatacata-ttcaggcactcaaaa 16367881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 179
Target Start/End: Original strand, 20918990 - 20919051
Alignment:
Q  119 caggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaa 179  Q
    ||||||||||||||||||| | ||||| ||||||||||||| | | ||||||||||||||||    
T  20918990 caggttcaatctcattctacattctttcctaatcattattagacatgttcaggcactcaaaa 20919051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 84
Target Start/End: Original strand, 16758949 - 16759005
Alignment:
Q  28 attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcag 84  Q
    ||||||||||| || ||||||||||| || |||||||||| || |||||||||||||    
T  16758949 attctgtaactaggcaactcgcgaggtgagggcctctacttgctatggcgagttcag 16759005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 176
Target Start/End: Complemental strand, 35260813 - 35260729
Alignment:
Q  93 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactca 176  Q
    |||||||||||||| ||||||| |  |||||||||||||| |||| || |||  ||||||||||||| | | |||||||||||||    
T  35260813 cccaaaaatccatttttaaactttctcaggttcaatctcaatctaaaaacttgcctaatcattattatacatgttcaggcactca 35260729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 115 - 189
Target Start/End: Complemental strand, 20846966 - 20846891
Alignment:
Q  115 attccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 189  Q
    ||||||||||||||||||| ||| | ||||  ||||||||||||| | | |||||||||||||||| | |||||||    
T  20846966 attccaggttcaatctcatcctacattcttacctaatcattattagacatgttcaggcactcaaaagcatctaagg 20846891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 199
Target Start/End: Complemental strand, 41049726 - 41049619
Alignment:
Q  93 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtc 191  Q
    ||||||||| |||| | ||||| | ||||||||||||||| |||| || |||  |||| |||||||| | | ||||||||||||| |||| ||||||||     
T  41049726 cccaaaaattcattttcaaactttcccaggttcaatctcaatctaaaaacttgcctaaccattattatacatgttcaggcactcagaaacatctaaggtt 41049627  T
Q  192 caacttaa 199  Q
    | ||||||    
T  41049626 cgacttaa 41049619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 196
Target Start/End: Complemental strand, 38801138 - 38801056
Alignment:
Q  115 attccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 196  Q
    ||||||||||||||| ||| ||| | ||||| ||||||||||||| | | ||||||||||||||| || ||||| || |||||    
T  38801138 attccaggttcaatcacatcctacattctttcctaatcattattagacatgttcaggcactcaaagacatctaaagttcaact 38801056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 86
Target Start/End: Complemental strand, 38801199 - 38801157
Alignment:
Q  44 actcgcgaggcgatggcctctactcgccatggcgagttcaggt 86  Q
    |||||||||||||  ||||||||||||| ||||||||||||||    
T  38801199 actcgcgaggcgagagcctctactcgccgtggcgagttcaggt 38801157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 47 - 84
Target Start/End: Complemental strand, 21861372 - 21861335
Alignment:
Q  47 cgcgaggcgatggcctctactcgccatggcgagttcag 84  Q
    |||||||||| ||||||||||||| |||||||||||||    
T  21861372 cgcgaggcgagggcctctactcgctatggcgagttcag 21861335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 86
Target Start/End: Complemental strand, 22354387 - 22354338
Alignment:
Q  37 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggt 86  Q
    |||||| ||| |||||||||  ||||||||||||| ||||||||||||||    
T  22354387 ctgggtcacttgcgaggcgagagcctctactcgccgtggcgagttcaggt 22354338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 95 - 159
Target Start/End: Complemental strand, 16093572 - 16093508
Alignment:
Q  95 caaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattatta 159  Q
    |||||||||||| || |||| ||||||||||||||||| |||| || |||  | |||||||||||    
T  16093572 caaaaatccattttttaacttttccaggttcaatctcaatctaaaaacttgccaaatcattatta 16093508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 157
Target Start/End: Original strand, 24087730 - 24087842
Alignment:
Q  45 ctcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatctt 144  Q
    ||||||||||||  |||||||||||||| ||||||||  |||  ||| | ||| |||||||||| |  |||||||  ||||||||||| |||| ||  ||    
T  24087730 ctcgcgaggcgagagcctctactcgccacggcgagttagggtaaaacactcaagaatccattctgactctattccgagttcaatctcagtctaaaacttt 24087829  T
Q  145 ttctaatcattat 157  Q
      |||||||||||    
T  24087830 gcctaatcattat 24087842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 6 - 212
Target Start/End: Complemental strand, 5967 - 5760
Alignment:
Q  6 atcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatcca 104  Q
    |||||||||||||||| ||| | ||| ||||||||||||| ||||||||||| ||||||||||||| | |||||||||||||| || || | ||||||||    
T  5967 atcgcatttaacctaaacaaggcattatgtaactgggtaattcgcgaggcgagggcctctactcgctaaggcgagttcaggtgcaaatcac-aaaatcca 5869  T
Q  105 ttcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaacttaagggg 203  Q
    | ||||||||||| | |||||||||||| |||| ||| ||| ||||||||||||| | | ||||||| |||||||||| |||||| | |||||||| ||     
T  5868 tccttaaactattactggttcaatctcaatctacaatttttcctaatcattattatacatgttcaggtactcaaaaacatctaagattcaacttaaaggt 5769  T
Q  204 caaaactac 212  Q
    |||| ||||    
T  5768 caaatctac 5760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0530 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0530
Description:

Target: scaffold0530; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 6 - 212
Target Start/End: Complemental strand, 879 - 666
Alignment:
Q  6 atcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatcca 104  Q
    |||||||||||||||| ||| | ||| ||||||||||||| ||||||||||| ||||||||||||| | |||||||||||||| ||||| | ||||||||    
T  879 atcgcatttaacctaaacaaggcattatgtaactgggtaattcgcgaggcgagggcctctactcgctaaggcgagttcaggtgcaactcac-aaaatcca 781  T
Q  105 ttcttaaactattccaggt------tcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaactt 197  Q
    | ||||||||||| |||||      ||||||||| |||| ||||||| ||||||||||||| | | |||||||||||||||||| |||||| | ||||||    
T  780 tccttaaactattacaggttcaatctcaatctcaatctacaatctttcctaatcattattatacatgttcaggcactcaaaaacatctaagattcaactt 681  T
Q  198 aaggggcaaaactac 212  Q
    || || |||| ||||    
T  680 aaaggtcaaatctac 666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1984 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold1984
Description:

Target: scaffold1984; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 6 - 189
Target Start/End: Original strand, 405 - 590
Alignment:
Q  6 atcgcatttaacctaacaaaga-attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatcca 104  Q
    |||||||||||| |||  |||| ||||||||||||||| |||||||||||||  |||||| |||||||||||||||||||||| ||||| ||||||| ||    
T  405 atcgcatttaacataagcaagacattctgtaactgggtcactcgcgaggcgagagcctctgctcgccatggcgagttcaggtgcaactcacaaaaattca 504  T
Q  105 ttcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 189  Q
    |||| |||   ||||| |||||||||||||||  ||||||| ||||||||||||| | | ||| |||||||||||||  |||||||    
T  505 ttctaaaatctttccaagttcaatctcattctccaatctttcctaatcattattagacatgtttaggcactcaaaaaagtctaagg 590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 189
Target Start/End: Original strand, 19536 - 19726
Alignment:
Q  1 caagtatcgcatttaacctaacaaaga-attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaa 99  Q
    |||| |||||||||||| |||  |||| ||||||||||||||| | |||||||||||  |||||| |||||||||||||||||||||| ||| |  ||||    
T  19536 caaggatcgcatttaacataagcaagacattctgtaactgggtcattcgcgaggcgagagcctctgctcgccatggcgagttcaggtgcaacacataaaa 19635  T
Q  100 atccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 189  Q
    || |||||| |||   |||||||||||||||||||||  |||| || ||||||||||||| | | |||||||||||||||||| |||||||    
T  19636 attcattctaaaatctttccaggttcaatctcattctccaatccttcctaatcattattagacatgttcaggcactcaaaaacatctaagg 19726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 6 - 181
Target Start/End: Complemental strand, 2489 - 2313
Alignment:
Q  6 atcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatcca 104  Q
    |||||||||| ||||| ||| | ||||||||||| |  || ||||||||| ||||||||||||||||||||||||||||||| ||||||||| || | |     
T  2489 atcgcatttatcctaaacaaggcattctgtaactagtcaattcgcgaggcaatggcctctactcgccatggcgagttcaggtataactcccacaagtacg 2390  T
Q  105 ttcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaac 181  Q
    ||||| ||||| |||||||||||||||| |||  ||||||| ||||||||||||| | | ||||||||||||||||||    
T  2389 ttctt-aactaatccaggttcaatctcaatctccaatctttcctaatcattattagacatgttcaggcactcaaaaac 2313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0475 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 189
Target Start/End: Original strand, 9347 - 9536
Alignment:
Q  1 caagtatcgcatttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaa 100  Q
    |||| ||||||||||||||| ||| | ||||||||| |||||| ||||||||||||  ||||||||||||||||||||||||||||  |  || ||||||    
T  9347 caaggatcgcatttaacctagcaaggcattctgtaaatgggtagctcgcgaggcgagagcctctactcgccatggcgagttcaggttcagttcacaaaaa 9446  T
Q  101 tccattcttaaact-attccaggttcaatctcattctagaatcttttctaatcattattaca-tagttcaggcactcaaaaacctctaagg 189  Q
    | ||||| ||||||  |||||||| |||||||| |||| | ||||| |||||| |||||| | | |||||||||||||||| | |||||||    
T  9447 ttcattc-taaactctttccaggtccaatctcactctacattctttcctaatcgttattagacttgttcaggcactcaaaagcatctaagg 9536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 66; Significance: 3e-29; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 87 - 179
Target Start/End: Original strand, 227849 - 227942
Alignment:
Q  87 gtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaa 179  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| | | ||| ||||||||||||    
T  227849 gtaactcccaaaaatccattcttaaactattccaggttcaatctcaatctagaatctttcctaatcattattatacatgtttaggcactcaaaa 227942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 92
Target Start/End: Original strand, 225705 - 225769
Alignment:
Q  28 attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaact 92  Q
    |||||||||||  |||||||||||||| | |||||||||| |  ||||||| |||||||||||||    
T  225705 attctgtaactatgtaactcgcgaggcaagggcctctacttgttatggcgatttcaggtgtaact 225769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0320 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 63 - 212
Target Start/End: Original strand, 12329 - 12478
Alignment:
Q  63 ctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacat 162  Q
    |||||||| ||||| | ||||| ||||||||| |||||||||||||||| |||||||||||||||||||| |||| ||||||| ||||||||||||| |     
T  12329 ctactcgctatggcaaattcagttgtaactccaaaaaatccattcttaa-ctattccaggttcaatctcaatctaaaatctttcctaatcattattatac 12427  T
Q  163 a-gttcaggcactcaaaaacctctaaggtccaacttaaggggcaaaactac 212  Q
    | |||||| ||||||||| | |||||    ||||||||||  |||||||||    
T  12428 atgttcagacactcaaaatcatctaaatatcaacttaaggatcaaaactac 12478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 6 - 189
Target Start/End: Complemental strand, 45636 - 45450
Alignment:
Q  6 atcgcatttaacctaacaaaga-attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactc-ccaaaaatcc 103  Q
    |||||||||| |||||  |||| ||||||||||| | || ||||||||||||  ||||||||||||||||||||||||||||  || || | |||||| |    
T  45636 atcgcatttatcctaaacaagacattctgtaactagttagctcgcgaggcgagagcctctactcgccatggcgagttcaggtacaattcacaaaaaattc 45537  T
Q  104 attcttaaactatt-ccaggttcaatctcattctagaatcttttctaatcattatt--acatagttcaggcactcaaaaacctctaagg 189  Q
    |||| |||| | || ||||||||||||||||||   ||||||| ||||||||||||  ||||| ||||||||||||||||| |||||||    
T  45536 attc-taaagtcttaccaggttcaatctcattccccaatctttcctaatcattattagacata-ttcaggcactcaaaaacatctaagg 45450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0839 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 28 - 179
Target Start/End: Complemental strand, 1900 - 1748
Alignment:
Q  28 attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaa 127  Q
    ||||||||||||||| |||||||||||||  |||||| ||||||||||||| |||||||   | | |||||  | |||||| |||   ||||||||||||    
T  1900 attctgtaactgggtcactcgcgaggcgagagcctctgctcgccatggcgaattcaggtcagatttccaaagtttcattctaaaatctttccaggttcaa 1801  T
Q  128 tctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaa 179  Q
    |||||||||| | ||||| ||||||||||||| | | ||||||||||||||||    
T  1800 tctcattctacattctttcctaatcattattagacatgttcaggcactcaaaa 1748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621 (Bit Score: 57; Significance: 7e-24; HSPs: 2)
Name: scaffold0621
Description:

Target: scaffold0621; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 6 - 179
Target Start/End: Original strand, 6811 - 6987
Alignment:
Q  6 atcgcatttaacctaa-caaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactccca-aaaatcc 103  Q
    |||||||||| ||||| ||| | ||| ||||||| |  || |||||||| || |||||| |||||||||||||||||||||| ||||||||| ||  | |    
T  6811 atcgcatttatcctaaacaaggcattttgtaactagtcaattcgcgaggggagggcctccactcgccatggcgagttcaggtataactcccacaagtttc 6910  T
Q  104 attcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaa 179  Q
     |||||||||||||||||||||||||||| |||  ||||||| ||||| ||||||| | | || |||||||||||||    
T  6911 gttcttaaactattccaggttcaatctcaatctccaatctttcctaattattattagacatgtccaggcactcaaaa 6987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 84
Target Start/End: Original strand, 8784 - 8824
Alignment:
Q  44 actcgcgaggcgatggcctctactcgccatggcgagttcag 84  Q
    ||||||||||||| ||||||||||||| |||||||||||||    
T  8784 actcgcgaggcgagggcctctactcgctatggcgagttcag 8824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 55; Significance: 1e-22; HSPs: 3)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 37 - 189
Target Start/End: Original strand, 4814 - 4968
Alignment:
Q  37 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactatt-ccaggttcaatctcattc 135  Q
    |||||| |||||||| ||||  |||||| |||||||||||||||||||||   | |||||||  | |||||| ||| | || ||||||||||||||||||    
T  4814 ctgggtcactcgcgaagcgagagcctctgctcgccatggcgagttcaggtcagattcccaaagtttcattctaaaaatctttccaggttcaatctcattc 4913  T
Q  136 tagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 189  Q
    || | ||||||||||||||||||| | | |||||||||||||||| | |||||||    
T  4914 tacattcttttctaatcattattagacatgttcaggcactcaaaagcatctaagg 4968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 37 - 189
Target Start/End: Original strand, 12396 - 12550
Alignment:
Q  37 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactatt-ccaggttcaatctcattc 135  Q
    |||||| |||||||| ||||  |||||| |||||||||||||||||||||   | |||||||  | |||||| ||| | || ||||||||||||||||||    
T  12396 ctgggtcactcgcgaagcgagagcctctgctcgccatggcgagttcaggtcagattcccaaagtttcattctaaaaatctttccaggttcaatctcattc 12495  T
Q  136 tagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 189  Q
    || | ||||||||||||||||||| | | |||||||||||||||| | |||||||    
T  12496 tacattcttttctaatcattattagacatgttcaggcactcaaaagcatctaagg 12550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 37 - 189
Target Start/End: Original strand, 22348 - 22502
Alignment:
Q  37 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactatt-ccaggttcaatctcattc 135  Q
    |||||| |||||||| ||||  |||||| |||||||||||||||||||||   | |||||||  | |||||| ||| | || ||||||||||||||||||    
T  22348 ctgggtcactcgcgaagcgagagcctctgctcgccatggcgagttcaggtcagattcccaaagtttcattctaaaaatctttccaggttcaatctcattc 22447  T
Q  136 tagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 189  Q
    || | ||||||||||||||||||| | | |||||||||||||||| | |||||||    
T  22448 tacattcttttctaatcattattagacatgttcaggcactcaaaagcatctaagg 22502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 44 - 189
Target Start/End: Original strand, 132967 - 133113
Alignment:
Q  44 actcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatct 143  Q
    |||||||||||||  |||||| |||||||||||||||||||||  |  || ||||| | |||||| ||    |||||||||||||||||||||  |||||    
T  132967 actcgcgaggcgagagcctctgctcgccatggcgagttcaggttcagttcacaaaatttcattctaaagtctttccaggttcaatctcattctccaatct 133066  T
Q  144 tttctaatcattattacata-gttcaggcactcaaaaacctctaagg 189  Q
    || ||||||||||||| | | |||||||||||||||||| |||||||    
T  133067 ttcctaatcattattagacatgttcaggcactcaaaaacatctaagg 133113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 6 - 159
Target Start/End: Complemental strand, 40018 - 39864
Alignment:
Q  6 atcgcatttaacctaacaaaga-attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatcca 104  Q
    ||||||||||||||||  |||  ||| ||||||| | || ||||||||||||  ||||||||| |||||||| ||||||||| ||||||||| || | |     
T  40018 atcgcatttaacctaaataaggcattttgtaactagttagctcgcgaggcgagagcctctacttgccatggcaagttcaggtataactcccacaagttcg 39919  T
Q  105 ttcttaaactattccaggttcaatctcattctagaatcttttctaatcattatta 159  Q
    |||||||||||||||||||| ||| ||| |||  ||||||| |||| ||||||||    
T  39918 ttcttaaactattccaggttgaatgtcaatctccaatctttcctaaccattatta 39864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 117 - 189
Target Start/End: Original strand, 101781 - 101854
Alignment:
Q  117 tccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 189  Q
    ||||||||||||||||||||  ||||||| ||||||||||||| | | |||||||||||||||||| |||||||    
T  101781 tccaggttcaatctcattctccaatctttcctaatcattattagacatgttcaggcactcaaaaacttctaagg 101854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 189
Target Start/End: Original strand, 160964 - 161145
Alignment:
Q  10 catttaacctaacaaaga-attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattct 108  Q
    |||||| |||||| |||| ||||||||||| | || |||| |||| ||  |||||||||||||||||||| |||||||  |  || ||||||| ||||||    
T  160964 catttatcctaaccaagacattctgtaactagttacctcgtgaggtgagagcctctactcgccatggcgacttcaggttcagttcacaaaaattcattct 161063  T
Q  109 taaactat-tccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 189  Q
     ||| | | ||||||||||||||||||||  ||||||| ||||||||||||| | | |||||||||||||||||| |||||||    
T  161064 -aaagtctctccaggttcaatctcattctccaatctttcctaatcattattagacatgttcaggcactcaaaaacatctaagg 161145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0503 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0503
Description:

Target: scaffold0503; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 29 - 189
Target Start/End: Original strand, 12228 - 12388
Alignment:
Q  29 ttctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaat 128  Q
    |||||||| |||| ||||||||||| ||  ||||||||||||||||||||||||||||     ||| |||| | ||||||| || || ||||||||||||    
T  12228 ttctgtaattgggcaactcgcgaggtgagagcctctactcgccatggcgagttcaggtcagtttccaaaaagttcattctt-aattaatccaggttcaat 12326  T
Q  129 ctcattctagaatcttttctaatcattatt--acatagttcaggcactcaaaaacctctaagg 189  Q
    ||||||||| | ||||| ||||||||||||  ||||| ||||| ||||||||| | |||||||    
T  12327 ctcattctacattctttcctaatcattattaaacata-ttcagacactcaaaagcatctaagg 12388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 51; Significance: 2e-20; HSPs: 2)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 6 - 108
Target Start/End: Complemental strand, 10385 - 10283
Alignment:
Q  6 atcgcatttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccat 105  Q
    ||||||||||||||||||| | | | |||||| ||  ||||||||||||||  ||||||||||||  ||||||||||||||||||||| ||||||| |||    
T  10385 atcgcatttaacctaacaaggcagtatgtaacaggacaactcgcgaggcgagagcctctactcgctttggcgagttcaggtgtaactcacaaaaattcat 10286  T
Q  106 tct 108  Q
    |||    
T  10285 tct 10283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 130 - 190
Target Start/End: Complemental strand, 10289 - 10228
Alignment:
Q  130 tcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggt 190  Q
    |||||||| ||||||| ||||||||||||| | | |||||||||||||||||| ||||||||    
T  10289 tcattctaaaatctttactaatcattattagacatgttcaggcactcaaaaacatctaaggt 10228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 44 - 189
Target Start/End: Original strand, 32397 - 32543
Alignment:
Q  44 actcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatct 143  Q
    |||||||||| ||  |||||| |||||||||||||||||||||  |  || ||||| | |||||| ||    |||||||||||||||||||||  |||||    
T  32397 actcgcgaggtgagagcctctgctcgccatggcgagttcaggttcagttcacaaaatttcattctaaagtctttccaggttcaatctcattctccaatct 32496  T
Q  144 tttctaatcattattacata-gttcaggcactcaaaaacctctaagg 189  Q
    || ||||||||||||| | | |||||||||||||||||| |||||||    
T  32497 ttcctaatcattattagacatgttcaggcactcaaaaacatctaagg 32543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 48; Significance: 2e-18; HSPs: 4)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 93 - 211
Target Start/End: Complemental strand, 27400 - 27281
Alignment:
Q  93 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtc 191  Q
    |||||||||||||||||||| | | |||||||||||||||  ||| || |||  ||||||||||||| | | |||||||||||||||| | ||||| ||     
T  27400 cccaaaaatccattcttaaaatttcccaggttcaatctcaaactaaaaacttgcctaatcattattatacatgttcaggcactcaaaatcatctaaagtt 27301  T
Q  192 caacttaaggggcaaaacta 211  Q
    ||||||||||| ||||||||    
T  27300 caacttaagggtcaaaacta 27281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 84
Target Start/End: Complemental strand, 27526 - 27485
Alignment:
Q  43 aactcgcgaggcgatggcctctactcgccatggcgagttcag 84  Q
    |||||||||||||| ||||||||||||| |||||||||||||    
T  27526 aactcgcgaggcgagggcctctactcgctatggcgagttcag 27485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 196
Target Start/End: Original strand, 3855 - 3937
Alignment:
Q  115 attccaggttcaatctcattctagaatcttttctaatcattatta--catagttcaggcactcaaaaacctctaaggtccaact 196  Q
    ||||||||||||||||||| ||| | ||||| |||||||||| ||  ||| |||||||||||||||  | |||||||| |||||    
T  3855 attccaggttcaatctcatcctacattctttcctaatcattactagtcat-gttcaggcactcaaagtcatctaaggttcaact 3937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 196
Target Start/End: Original strand, 7919 - 8001
Alignment:
Q  115 attccaggttcaatctcattctagaatcttttctaatcattatta--catagttcaggcactcaaaaacctctaaggtccaact 196  Q
    ||||||||||||||||||| ||| | ||||| |||||||||| ||  ||| |||||||||||||||  | |||||||| |||||    
T  7919 attccaggttcaatctcatcctacattctttcctaatcattactagtcat-gttcaggcactcaaagtcatctaaggttcaact 8001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 28 - 189
Target Start/End: Original strand, 17078 - 17240
Alignment:
Q  28 attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaa-ctattccaggttca 126  Q
    ||||||||| | ||| |||||||||||||  |||||| |||||||||||||||||||||   | || ||||  |  ||||| ||| |||| |||||||||    
T  17078 attctgtaaataggtcactcgcgaggcgagagcctctgctcgccatggcgagttcaggtcatattctcaaagttttattctaaaatctat-ccaggttca 17176  T
Q  127 atctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 189  Q
    ||||||||||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  17177 atctcattctacattctttcctaatcattattaaacatgttcaggcactcaaaagcatctaagg 17240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 93 - 201
Target Start/End: Complemental strand, 24279 - 24169
Alignment:
Q  93 cccaaaaatcc-attcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggt 190  Q
    ||||||||||| ||| ||||||||||||||||||||||||| |||| || |||  ||||||||||||| |||  ||||||||||||||| | |||||| |    
T  24279 cccaaaaatcccatttttaaactattccaggttcaatctcaatctaaaagcttgcctaatcattattatatatattcaggcactcaaaatcatctaagct 24180  T
Q  191 ccaacttaagg 201  Q
     ||||||||||    
T  24179 tcaacttaagg 24169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 29 - 189
Target Start/End: Complemental strand, 20247 - 20087
Alignment:
Q  29 ttctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaa-tccattcttaaactattccaggttcaa 127  Q
    |||||||| | || |||| |||||||||  ||||||||||||||||||||||||||||  | || ||||||| | ||||||| || || |||||||||||    
T  20247 ttctgtaattaggcaacttgcgaggcgagagcctctactcgccatggcgagttcaggt-cagcttccaaaaagttcattctt-aattaatccaggttcaa 20150  T
Q  128 tctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 189  Q
    |||||||||| | ||||| ||| ||||||||| | | ||||||| |||||||| | |||||||    
T  20149 tctcattctacattctttcctactcattattaaacatgttcaggaactcaaaagcatctaagg 20087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 37 - 189
Target Start/End: Complemental strand, 25879 - 25726
Alignment:
Q  37 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattct 136  Q
    |||||| |||||||||||||  |||||| |||||| ||||||||||||||   | | |||||||| ||||||  ||   || ||||||||||||||| ||    
T  25879 ctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagatttccaaaaattcattctacaatcttttcaggttcaatctcatcct 25780  T
Q  137 agaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 189  Q
    | | ||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  25779 acattctttcctaatcattattagacatgttcaggcactcaaaaccatctaagg 25726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 45; Significance: 9e-17; HSPs: 6)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 82 - 189
Target Start/End: Original strand, 62913 - 63021
Alignment:
Q  82 caggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaa 180  Q
    |||||| ||||| ||||||| |||||| |||   |||||||||||||||||||||  ||||||| ||||||||||||| | | ||||| |||||||||||    
T  62913 caggtgcaactcacaaaaattcattctaaaatatttccaggttcaatctcattctccaatctttcctaatcattattagacatgttcatgcactcaaaaa 63012  T
Q  181 cctctaagg 189  Q
    | |||||||    
T  63013 catctaagg 63021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 85
Target Start/End: Complemental strand, 136207 - 136132
Alignment:
Q  10 catttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcagg 85  Q
    ||||||||||||||| |  |||| ||| |||  ||||||||||||||  |||||||||||| ||||||||||||||    
T  136207 catttaacctaacaaggtgttctataaatggacaactcgcgaggcgagagcctctactcgctatggcgagttcagg 136132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 85
Target Start/End: Complemental strand, 144915 - 144840
Alignment:
Q  10 catttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcagg 85  Q
    ||||||||||||||| |  |||| ||| |||  ||||||||||||||  |||||||||||| ||||||||||||||    
T  144915 catttaacctaacaaggtgttctataaatggacaactcgcgaggcgagagcctctactcgctatggcgagttcagg 144840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 199
Target Start/End: Complemental strand, 136049 - 135942
Alignment:
Q  93 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtc 191  Q
    ||||||||| |||| ||||||| | ||||||||||||||| |||| || |||  ||||||||||||| | | ||||| ||||||| |  ||||||||||     
T  136049 cccaaaaattcatttttaaactttcccaggttcaatctcaatctaaaaacttgcctaatcattattatacatgttcaagcactcagagtcctctaaggtt 135950  T
Q  192 caacttaa 199  Q
    | ||||||    
T  135949 cgacttaa 135942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 199
Target Start/End: Complemental strand, 144757 - 144650
Alignment:
Q  93 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtc 191  Q
    ||||||||| |||| ||||||| | ||||||||||||||| |||| || |||  ||||||||||||| | | ||||| ||||||| |  ||||||||||     
T  144757 cccaaaaattcatttttaaactttcccaggttcaatctcaatctaaaaacttgcctaatcattattatacatgttcaagcactcagagtcctctaaggtt 144658  T
Q  192 caacttaa 199  Q
    | ||||||    
T  144657 cgacttaa 144650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 86
Target Start/End: Original strand, 124891 - 124940
Alignment:
Q  37 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggt 86  Q
    |||||| |||||||||||||  |||||| |||||| ||||||||||||||    
T  124891 ctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 124940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 45; Significance: 9e-17; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 39 - 189
Target Start/End: Original strand, 2159 - 2311
Alignment:
Q  39 gggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactccca-aaaatccattcttaaactattccaggttcaatctcattcta 137  Q
    |||| ||||| |||||||| ||||||||||||||||||||||||||||   | ||||| ||  | ||||||  ||   |||||||||||||||||| |||    
T  2159 gggtcactcgtgaggcgatagcctctactcgccatggcgagttcaggtcagaatcccacaagtttcattctacaatctttccaggttcaatctcatccta 2258  T
Q  138 gaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 189  Q
     | ||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  2259 cattctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 2311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 201
Target Start/End: Complemental strand, 119280 - 119200
Alignment:
Q  122 gttcaatctcattctagaatcttttctaatcattat--tacatagttcaggcactcaaaaacctctaaggtccaacttaagg 201  Q
    ||||||||||| |||| || ||| ||||||||||||  |||||| ||||||||||||||| | ||||| || ||||||||||    
T  119280 gttcaatctcaatctaaaaacttgtctaatcattattatacata-ttcaggcactcaaaatcatctaatgttcaacttaagg 119200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 103 - 189
Target Start/End: Original strand, 5966 - 6053
Alignment:
Q  103 cattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattaca-tagttcaggcactcaaaaacctctaagg 189  Q
    |||||||||||||||||| ||||||||||| |||  ||||||| ||||||||||||| |   |||||||||||||||||| |||||||    
T  5966 cattcttaaactattccaagttcaatctcaatctccaatctttcctaatcattattagacctgttcaggcactcaaaaacatctaagg 6053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 6 - 85
Target Start/End: Complemental strand, 7920 - 7841
Alignment:
Q  6 atcgcatttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcagg 85  Q
    |||||||||| |||||||| | ||| |||||||||| ||||||||||||||  |||| ||||||| ||||||||||||||    
T  7920 atcgcatttaccctaacaaggcattttgtaactgggcaactcgcgaggcgagagcctttactcgctatggcgagttcagg 7841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 120 - 195
Target Start/End: Complemental strand, 29011 - 28935
Alignment:
Q  120 aggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaac 195  Q
    |||||||||||||||||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||| ||||    
T  29011 aggttcaatctcattctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaac 28935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 44 - 189
Target Start/End: Complemental strand, 28616 - 28470
Alignment:
Q  44 actcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattcc-aggttcaatctcattctagaatc 142  Q
    |||||||||||||  |||||| |||||||||||||||||||||  |  || ||||| | |||||| ||| | |||  |||||||||||||||||  ||||    
T  28616 actcgcgaggcgagagcctctgctcgccatggcgagttcaggttcagttcacaaaatttcattct-aaagtcttcgtaggttcaatctcattctccaatc 28518  T
Q  143 ttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 189  Q
    ||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  28517 tttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 28470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 3)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 37 - 189
Target Start/End: Complemental strand, 17029 - 16876
Alignment:
Q  37 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatc-cattcttaaactattccaggttcaatctcattc 135  Q
    |||||| |||||||||||||  |||||| ||| || ||||||||||||||   | | |||||| |  |||||| || || ||||||||||||||||||||    
T  17029 ctgggtcactcgcgaggcgagagcctctgctctccgtggcgagttcaggtcagaattccaaaagtttcattctaaatct-ttccaggttcaatctcattc 16931  T
Q  136 tagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 189  Q
    || | ||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  16930 tacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 16876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 117 - 196
Target Start/End: Complemental strand, 79096 - 79016
Alignment:
Q  117 tccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 196  Q
    ||||||||||||||||||||| | || || ||||||||||||| | | ||||| |||||||||| | |||||||| |||||    
T  79096 tccaggttcaatctcattctacattccttcctaatcattattaaacatgttcatgcactcaaaagcatctaaggttcaact 79016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 73
Target Start/End: Complemental strand, 79151 - 79107
Alignment:
Q  29 ttctgtaactgggtaactcgcgaggcgatggcctctactcgccat 73  Q
    |||||||| |||| ||||||||||||||  |||||||||||||||    
T  79151 ttctgtaattgggcaactcgcgaggcgagagcctctactcgccat 79107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 44 - 189
Target Start/End: Complemental strand, 15422 - 15276
Alignment:
Q  44 actcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaa-ctattccaggttcaatctcattctagaatc 142  Q
    |||||||||||||  |||||| ||||| |||||||||||||||   | |||||||  | |||||| ||| |||| |||| ||||||||||||||| | ||    
T  15422 actcgcgaggcgagagcctctgctcgctatggcgagttcaggtcagattcccaaagtttcattctaaaatctat-ccagattcaatctcattctacattc 15324  T
Q  143 ttttctaatcattatt--acatagttcaggcactcaaaaacctctaagg 189  Q
    ||| ||||||||||||  ||||| ||||||||||||||| | |||||||    
T  15323 tttcctaatcattattaaacata-ttcaggcactcaaaagcatctaagg 15276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 93 - 209
Target Start/End: Original strand, 13007 - 13124
Alignment:
Q  93 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtc 191  Q
    |||||||||||||| ||||||| |  |||||||||||||| |||| || |||  |||||||||| || | | | |||||||||||||| | ||||| ||     
T  13007 cccaaaaatccatttttaaactttctcaggttcaatctcaatctaaaaacttgcctaatcattaatatacatggtcaggcactcaaaatcatctaaagtt 13106  T
Q  192 caacttaaggggcaaaac 209  Q
    ||||||||||| ||||||    
T  13107 caacttaagggtcaaaac 13124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 37 - 189
Target Start/End: Original strand, 649 - 802
Alignment:
Q  37 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattct 136  Q
    |||||| |||||||||||||  |||||||||||||  ||||||||||| |   | ||| |||  | |||||| ||    ||| |||||||||||||||||    
T  649 ctgggtcactcgcgaggcgagagcctctactcgccgcggcgagttcagttcagattccaaaagtttcattctaaattctttctaggttcaatctcattct 748  T
Q  137 agaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 189  Q
    | | ||||||||||||||||||| | | |||||||||||||||| | |||||||    
T  749 acattcttttctaatcattattagacatgttcaggcactcaaaagcatctaagg 802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 179
Target Start/End: Original strand, 3777 - 3920
Alignment:
Q  38 tgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatcc-attcttaaactattccaggttcaatctcattct 136  Q
    ||||| |||||||||||||  |||||| |||||| ||||||||||||||   | ||||| || |   |||||  ||  ||||||||||||||||||| ||    
T  3777 tgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttgattctacaatcattccaggttcaatctcatcct 3876  T
Q  137 agaatcttttctaatcattattacata-gttcaggcactcaaaa 179  Q
    | | ||||| ||||||||||||| | | |||||| |||||||||    
T  3877 acattctttcctaatcattattagacatgttcagacactcaaaa 3920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 95 - 209
Target Start/End: Original strand, 14004 - 14119
Alignment:
Q  95 caaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattatta--catagttcaggcactcaaaaacctctaaggtcc 192  Q
    |||||||||||| ||||||  | |||||| |||||||| |||| || |||  |||||||||||||  |||| ||||||||||||||| | |||||||| |    
T  14004 caaaaatccatttttaaacattaccaggtccaatctcaatctaaaaacttacctaatcattattatacata-ttcaggcactcaaaatcatctaaggttc 14102  T
Q  193 aacttaaggggcaaaac 209  Q
    |||||||||| ||||||    
T  14103 aacttaagggacaaaac 14119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 115 - 196
Target Start/End: Complemental strand, 11260 - 11178
Alignment:
Q  115 attccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 196  Q
    ||||||||||||||||||| ||| | ||||| ||||||||||||| | | ||||||||||||||||   |||||||| |||||    
T  11260 attccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagaatctaaggttcaact 11178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 38 - 189
Target Start/End: Complemental strand, 16413 - 16260
Alignment:
Q  38 tgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatc-cattcttaaactattccaggttcaatctcattct 136  Q
    ||||| |||||||||||||  |||||| |||||||||||||||||||||   | | |||||  |  |||||  |||   |||||||||||||||||||||    
T  16413 tgggtcactcgcgaggcgagagcctctgctcgccatggcgagttcaggttagatttccaaacgtttcattcgaaaatctttccaggttcaatctcattct 16314  T
Q  137 agaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 189  Q
    | | ||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  16313 aaattctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 16260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 37 - 189
Target Start/End: Original strand, 39067 - 39219
Alignment:
Q  37 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattct 136  Q
    |||||| |||||||||||||  |||||| |||||| ||||||||||||||   | |||  ||  | |||||  || || |||||||||||||||||||||    
T  39067 ctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatccacaagtttcattcaaaatct-ttccaggttcaatctcattct 39165  T
Q  137 agaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 189  Q
    | | ||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  39166 acattctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 39219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 3)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 93 - 208
Target Start/End: Complemental strand, 53230 - 53113
Alignment:
Q  93 cccaaaaatccattctt-aaactattccaggttcaatctcattctagaatcttttctaatcattattaca-tagttcaggcactcaaaaacctctaaggt 190  Q
    |||||||||||||| || ||||| | ||||||||||||||| |||| || |||  ||||||||||||| | | |||||||||||||||| | ||||| ||    
T  53230 cccaaaaatccattttttaaactttcccaggttcaatctcaatctaaaaacttgcctaatcattattatacttgttcaggcactcaaaatcatctaaagt 53131  T
Q  191 ccaacttaaggggcaaaa 208  Q
     ||||||||||| |||||    
T  53130 tcaacttaagggtcaaaa 53113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 84
Target Start/End: Complemental strand, 53354 - 53314
Alignment:
Q  44 actcgcgaggcgatggcctctactcgccatggcgagttcag 84  Q
    ||||||||||||| ||||||||||||| |||||||||||||    
T  53354 actcgcgaggcgagggcctctactcgctatggcgagttcag 53314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 116 - 196
Target Start/End: Complemental strand, 8029 - 7948
Alignment:
Q  116 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 196  Q
    |||||||||||||||||| ||| | ||||| ||||||| ||||| | | |||||||||||||||  | |||||||| |||||    
T  8029 ttccaggttcaatctcatcctacattctttcctaatcaatattagacatgttcaggcactcaaaggcatctaaggttcaact 7948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 3)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 28 - 83
Target Start/End: Complemental strand, 15921 - 15866
Alignment:
Q  28 attctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttca 83  Q
    |||||||||||||| |||||||||||||| ||||| ||||||| ||||||||||||    
T  15921 attctgtaactgggcaactcgcgaggcgagggcctatactcgctatggcgagttca 15866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 93 - 159
Target Start/End: Original strand, 13570 - 13636
Alignment:
Q  93 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattatta 159  Q
    |||||||||||||||||||||| | ||||||||||||||| |||| || |||  |||||||||||||    
T  13570 cccaaaaatccattcttaaactttcccaggttcaatctcaatctaaaaacttgcctaatcattatta 13636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 93 - 190
Target Start/End: Original strand, 3133 - 3231
Alignment:
Q  93 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattat--tacatagttcaggcactcaaaaacctctaaggt 190  Q
    |||||||||||||| ||||||| | ||| ||||||||||| |||| || |||  |||||||||||  |||||| ||||||||||||||| | ||||||||    
T  3133 cccaaaaatccatttttaaactttcccaagttcaatctcaatctaaaaacttgcctaatcattattgtacata-ttcaggcactcaaaatcatctaaggt 3231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 2)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 10 - 85
Target Start/End: Complemental strand, 19724 - 19649
Alignment:
Q  10 catttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcagg 85  Q
    ||||||||||||||| |  ||||||||||||| ||||| ||||||||  |||||||||| | ||||||||||||||    
T  19724 catttaacctaacaaggtgttctgtaactgggcaactcacgaggcgagagcctctactccctatggcgagttcagg 19649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 16 - 86
Target Start/End: Original strand, 40198 - 40268
Alignment:
Q  16 acctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggt 86  Q
    ||||||||| | | |||||  |||||| |||||||||||||  ||||||||||||| ||||||||||||||    
T  40198 acctaacaaggtactctgtttctgggtcactcgcgaggcgagagcctctactcgccgtggcgagttcaggt 40268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 2)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 93 - 199
Target Start/End: Complemental strand, 103341 - 103234
Alignment:
Q  93 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtc 191  Q
    ||||||||| |||| ||||||| | ||||||||||||||| |||| || |||  ||||||||||||| | | ||||||||||||| || ||||||||||     
T  103341 cccaaaaattcatttttaaactttcccaggttcaatctcaatctaaaaacttgcctaatcattattatacatgttcaggcactcagaatcctctaaggtt 103242  T
Q  192 caacttaa 199  Q
    | ||||||    
T  103241 cgacttaa 103234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 85
Target Start/End: Complemental strand, 103478 - 103403
Alignment:
Q  10 catttaacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcagg 85  Q
    ||||||||||||||| |  |||||||| |||  |||||| |||||||  |||||||||||| ||||||||||||||    
T  103478 catttaacctaacaaggtgttctgtaaatggacaactcgtgaggcgagagcctctactcgctatggcgagttcagg 103403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 93 - 179
Target Start/End: Original strand, 80701 - 80788
Alignment:
Q  93 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaa 179  Q
    |||||||||||||| ||||||| | ||||||||||||||| |||| || |||  ||||||||||||| | | ||||||||||||||||    
T  80701 cccaaaaatccatttttaaactttcccaggttcaatctcaatctaaaaacttgcctaatcattattatacatgttcaggcactcaaaa 80788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 85
Target Start/End: Complemental strand, 128775 - 128735
Alignment:
Q  45 ctcgcgaggcgatggcctctactcgccatggcgagttcagg 85  Q
    ||||||||||||  |||||||||||| ||||||||||||||    
T  128775 ctcgcgaggcgagagcctctactcgctatggcgagttcagg 128735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 44 - 189
Target Start/End: Complemental strand, 2609 - 2464
Alignment:
Q  44 actcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatct 143  Q
    |||||||||||||  |||||||||||||||||||||||||||| | | | |  ||| | |||||| |||   || ||||||||| ||||||||  |||||    
T  2609 actcgcgaggcgagagcctctactcgccatggcgagttcaggt-tcagttcacaaatttcattctaaaatctttacaggttcaaactcattctccaatct 2511  T
Q  144 tttctaatcattattacata-gttcaggcactcaaaaacctctaagg 189  Q
    || ||||||||||||| | | ||||||| |||||||| | |||||||    
T  2510 ttcctaatcattattagacatgttcaggtactcaaaagcatctaagg 2464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0627 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0627
Description:

Target: scaffold0627; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 37 - 181
Target Start/End: Original strand, 211 - 356
Alignment:
Q  37 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgt-aactcccaaaaatccattcttaaactattccaggttcaatctcattc 135  Q
    |||||| ||||||| |||||  ||||||||||||  ||||||||||||||   |||||  |||  | |||||| || || |||||||||||||||||| |    
T  211 ctgggtcactcgcgtggcgagagcctctactcgctgtggcgagttcaggtcagaactcaaaaagtttcattctaaatct-ttccaggttcaatctcatcc 309  T
Q  136 tagaatcttttctaatcattattacata-gttcaggcactcaaaaac 181  Q
    || | ||||| ||||||||||||| | | ||||||||||||||||||    
T  310 tacattctttcctaatcattattagacatgttcaggcactcaaaaac 356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 119 - 196
Target Start/End: Original strand, 34509 - 34587
Alignment:
Q  119 caggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 196  Q
    ||||||||||||||||||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||| |||||    
T  34509 caggttcaatctcattctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaact 34587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 86
Target Start/End: Original strand, 13398 - 13447
Alignment:
Q  37 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggt 86  Q
    |||||| |||||||||||||  |||||| |||||| ||||||||||||||    
T  13398 ctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 13447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 119 - 196
Target Start/End: Complemental strand, 2177 - 2099
Alignment:
Q  119 caggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 196  Q
    ||||||||||||||||||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||| |||||    
T  2177 caggttcaatctcattctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaact 2099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 3)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 37 - 189
Target Start/End: Original strand, 52218 - 52372
Alignment:
Q  37 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatc-cattcttaaactattccaggttcaatctcattc 135  Q
    |||||| |||||||||||||  |||||| |||||| ||||||||||||||   | ||||| || |  ||||||  ||   |||||||||||||||||| |    
T  52218 ctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttcattctacaatctttccaggttcaatctcatcc 52317  T
Q  136 tagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 189  Q
    || | ||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  52318 tacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 52372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 167721 - 167644
Alignment:
Q  120 aggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 196  Q
    |||||||||||||| ||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||| |||||    
T  167721 aggttcaatctcatcctaaattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaact 167644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 86
Target Start/End: Complemental strand, 167794 - 167745
Alignment:
Q  37 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggt 86  Q
    |||||| |||||||||||||  |||||| |||||| ||||||||||||||    
T  167794 ctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 167745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0876 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0876
Description:

Target: scaffold0876; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 116 - 196
Target Start/End: Complemental strand, 2820 - 2739
Alignment:
Q  116 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 196  Q
    |||||||||||||||||| ||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||| |||||    
T  2820 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaact 2739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 45 - 158
Target Start/End: Complemental strand, 8298 - 8185
Alignment:
Q  45 ctcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatctt 144  Q
    ||||||||| ||  |||||||||||||| ||||| ||  |||  ||| | ||| |||||||||| | ||||||||| |||||||||||||||| || |||    
T  8298 ctcgcgaggtgagagcctctactcgccacggcgatttagggtaaaacactcaagaatccattctgacactattccaagttcaatctcattctaaaacctt 8199  T
Q  145 ttctaatcattatt 158  Q
      ||||||||||||    
T  8198 gcctaatcattatt 8185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 118 - 189
Target Start/End: Complemental strand, 695 - 623
Alignment:
Q  118 ccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 189  Q
    |||||||||||||| ||||| ||||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  695 ccaggttcaatctcgttctacaatctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 93 - 209
Target Start/End: Complemental strand, 1461 - 1344
Alignment:
Q  93 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtc 191  Q
    |||||||||||||| ||||||| |  |||||||||||||| |||| || ||| ||||||||||| || | | |||||||||||||||| | ||| | ||     
T  1461 cccaaaaatccatttttaaactttctcaggttcaatctcaatctaaaaacttgtctaatcattaatatacatgttcaggcactcaaaatcatctgaagtt 1362  T
Q  192 caacttaaggggcaaaac 209  Q
    |||||| |||| ||||||    
T  1361 caactttagggtcaaaac 1344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 189
Target Start/End: Original strand, 28924 - 28996
Alignment:
Q  118 ccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 189  Q
    |||||||||||||||||||| | ||||| ||||||||||||| | | ||||||| |||||||| | |||||||    
T  28924 ccaggttcaatctcattctacattctttcctaatcattattagacatgttcaggaactcaaaagcatctaagg 28996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 38; Significance: 0.000000000001; HSPs: 3)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 38 - 190
Target Start/End: Complemental strand, 32772 - 32619
Alignment:
Q  38 tgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattcta 137  Q
    ||||| ||||||||||||   |||||| |||||  |||||||||  |||| ||||| ||||||| |||||| |||   || ||||||||||||||||||     
T  32772 tgggtcactcgcgaggcgggagcctctcctcgctgtggcgagttagggtgcaactcacaaaaattcattctaaaatctttacaggttcaatctcattctc 32673  T
Q  138 gaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggt 190  Q
     | || || ||||||||||||| | | |||||| ||||||||| | ||||||||    
T  32672 cagtccttcctaatcattattagacatgttcagacactcaaaagcatctaaggt 32619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 38 - 190
Target Start/End: Original strand, 46233 - 46386
Alignment:
Q  38 tgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattcta 137  Q
    ||||| ||||||||||||   |||||| |||||  |||||||||  |||| ||||| ||||||| |||||| |||   || ||||||||||||||||||     
T  46233 tgggtcactcgcgaggcgggagcctctcctcgctgtggcgagttagggtgcaactcacaaaaattcattctaaaatctttacaggttcaatctcattctc 46332  T
Q  138 gaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggt 190  Q
     | || || ||||||||||||| | | |||||| ||||||||| | ||||||||    
T  46333 cagtccttcctaatcattattagacatgttcagacactcaaaagcatctaaggt 46386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 179
Target Start/End: Original strand, 16473 - 16537
Alignment:
Q  116 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaa 179  Q
    |||||||||||||||| | ||| | ||||| ||||||||||||| | | ||||||||||||||||    
T  16473 ttccaggttcaatctcgtcctacattctttcctaatcattattagacatgttcaggcactcaaaa 16537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0647 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0647
Description:

Target: scaffold0647; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 118 - 189
Target Start/End: Complemental strand, 5854 - 5782
Alignment:
Q  118 ccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 189  Q
    |||||||||||||||| ||| ||||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  5854 ccaggttcaatctcatcctacaatctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 5782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0601 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 95 - 212
Target Start/End: Original strand, 7095 - 7213
Alignment:
Q  95 caaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattat--tacatagttcaggcactcaaaaacctctaaggtcc 192  Q
    |||||||||||| ||||||| | ||||||||||||||| |||| || |||  |||||||||||  |||||| ||||| ||||||||| | |||||  | |    
T  7095 caaaaatccatttttaaactttcccaggttcaatctcaatctaaaaacttgcctaatcattattatacata-ttcagtcactcaaaatcatctaaaattc 7193  T
Q  193 aacttaaggggcaaaactac 212  Q
    |||||||||  |||||||||    
T  7194 aacttaaggttcaaaactac 7213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 115 - 196
Target Start/End: Complemental strand, 799 - 717
Alignment:
Q  115 attccaggttcaatctcattctagaatcttttctaatcattatt--acatagttcaggcactcaaaaacctctaaggtccaact 196  Q
    ||||||||||||||||||| ||| | ||||| ||||||||||||  ||||| ||||||||||||||| | |||||||| |||||    
T  799 attccaggttcaatctcatcctacattctttcctaatcattattagacata-ttcaggcactcaaaagcatctaaggttcaact 717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 86
Target Start/End: Complemental strand, 867 - 818
Alignment:
Q  37 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggt 86  Q
    |||||| |||||||||||||  |||||| |||||| ||||||||||||||    
T  867 ctgggttactcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 115 - 190
Target Start/End: Complemental strand, 10173 - 10097
Alignment:
Q  115 attccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggt 190  Q
    ||||||||||||||||||| ||| | ||||| ||||||||||||| | | |||||||||||||||| | ||||||||    
T  10173 attccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggt 10097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 43 - 189
Target Start/End: Original strand, 20425 - 20572
Alignment:
Q  43 aactcgcgaggcgatggcctctactcgccatggcgagttcaggtgt-aactcccaaaaatccattcttaaactattccaggttcaatctcattctagaat 141  Q
    ||||||||||||||  |||||| |||| | ||||||| ||||||   |||||| |||  | |||||| || || ||||||||||||||| |||||| | |    
T  20425 aactcgcgaggcgagagcctctgctcgtcgtggcgagctcaggtcagaactccaaaagtttcattctaaatct-ttccaggttcaatcttattctacatt 20523  T
Q  142 cttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 189  Q
    |||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  20524 ctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 20572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0305 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0305
Description:

Target: scaffold0305; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 189
Target Start/End: Original strand, 20717 - 20863
Alignment:
Q  45 ctcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatc-cattct-taaactattccaggttcaatctcattctagaatc 142  Q
    ||||||||||||  |||||| |||||| ||||||||||||||   | ||||| || |  |||||| ||| || |||||||||||||||||| ||| | ||    
T  20717 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttcattctataatct-ttccaggttcaatctcatcctacattc 20815  T
Q  143 ttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 189  Q
    ||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  20816 tttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 20863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 93 - 179
Target Start/End: Original strand, 25545 - 25632
Alignment:
Q  93 cccaaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaa 179  Q
    |||||||||||||| ||||||| ||||| ||||||||||| |||| || |||  ||||||||||||| | |  |||||||||||||||    
T  25545 cccaaaaatccatttttaaacttttccaagttcaatctcaatctaaaaacttgcctaatcattattatacattttcaggcactcaaaa 25632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0718 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0718
Description:

Target: scaffold0718; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 115 - 196
Target Start/End: Complemental strand, 4878 - 4796
Alignment:
Q  115 attccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 196  Q
    ||||||||||||||||||| ||| | ||||| ||||||||||||| | | |||||||||||||||  | |||||||| |||||    
T  4878 attccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaggcatctaaggttcaact 4796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0427 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0427
Description:

Target: scaffold0427; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 115 - 196
Target Start/End: Original strand, 13869 - 13951
Alignment:
Q  115 attccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 196  Q
    ||||||||||||||||||| ||| |  |||| ||||||||||||| | | |||||||||||||||| | |||||||| |||||    
T  13869 attccaggttcaatctcatgctacatcctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaact 13951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358 (Bit Score: 35; Significance: 0.00000000009; HSPs: 4)
Name: scaffold0358
Description:

Target: scaffold0358; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 115 - 196
Target Start/End: Original strand, 310 - 392
Alignment:
Q  115 attccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 196  Q
    ||||||| ||||||||||| ||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||| |||||    
T  310 attccagattcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaact 392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 115 - 196
Target Start/End: Original strand, 5086 - 5168
Alignment:
Q  115 attccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 196  Q
    ||||||| ||||||||||| ||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||| |||||    
T  5086 attccagattcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaact 5168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 86
Target Start/End: Original strand, 243 - 291
Alignment:
Q  38 tgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggt 86  Q
    ||||| ||| |||||||||  |||||| |||||||||||||||||||||    
T  243 tgggtcacttgcgaggcgagagcctctgctcgccatggcgagttcaggt 291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 86
Target Start/End: Original strand, 5019 - 5067
Alignment:
Q  38 tgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggt 86  Q
    ||||| ||| |||||||||  |||||| |||||||||||||||||||||    
T  5019 tgggtcacttgcgaggcgagagcctctgctcgccatggcgagttcaggt 5067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 117 - 190
Target Start/End: Complemental strand, 17742 - 17668
Alignment:
Q  117 tccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggt 190  Q
    ||||||||||||||||| ||| | ||||| ||||||||||||| | | |||||||||||||||| | ||||||||    
T  17742 tccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggt 17668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 116 - 189
Target Start/End: Complemental strand, 18693 - 18619
Alignment:
Q  116 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 189  Q
    |||||||||||||||||| ||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||    
T  18693 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 18619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 118 - 207
Target Start/End: Original strand, 29149 - 29239
Alignment:
Q  118 ccaggttcaatctcattctagaatcttttctaatcattattacatag-ttcaggcactcaaaaacctctaaggtccaacttaaggggcaaa 207  Q
    |||||| |||||||| |||| || |||  ||||||||||||| |||  ||||||||||||||| | |||||||| ||||||||||| ||||    
T  29149 ccaggtccaatctcaatctaaaaacttgcctaatcattattatatatattcaggcactcaaaatcatctaaggttcaacttaagggacaaa 29239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1842 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold1842
Description:

Target: scaffold1842; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 791 - 714
Alignment:
Q  120 aggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 196  Q
    |||||||||||||| ||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||| |||||    
T  791 aggttcaatctcatcctaaattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaact 714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1842; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 86
Target Start/End: Complemental strand, 864 - 815
Alignment:
Q  37 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggt 86  Q
    |||||| |||||||||||||  |||||| |||||| ||||||||||||||    
T  864 ctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0351 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0351
Description:

Target: scaffold0351; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 199
Target Start/End: Original strand, 16657 - 16738
Alignment:
Q  119 caggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaacttaa 199  Q
    ||||||||||||| | ||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||| ||||||||    
T  16657 caggttcaatctcgtcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaacttaa 16738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 189
Target Start/End: Original strand, 16047 - 16118
Alignment:
Q  119 caggttcaatctcattctagaatcttttctaatcattatt--acatagttcaggcactcaaaaacctctaagg 189  Q
    ||||||||||||||||||| | ||||| ||||||||||||  ||||| ||||||||||||||| | |||||||    
T  16047 caggttcaatctcattctacattctttcctaatcattattagacata-ttcaggcactcaaaagcatctaagg 16118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 207
Target Start/End: Complemental strand, 18021 - 17909
Alignment:
Q  96 aaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattat--tacatagttcaggcactcaaaaacctctaaggtcca 193  Q
    ||||||||||| ||||||  | |||||| |||||||| |||| || |||  |||||||||||  |||||| |||| ||||||||||   |||||||| ||    
T  18021 aaaaatccatttttaaaccttcccaggtccaatctcaatctaaaaacttgcctaatcattattatacata-ttcatgcactcaaaattatctaaggttca 17923  T
Q  194 acttaaggggcaaa 207  Q
    ||||||||| ||||    
T  17922 acttaagggacaaa 17909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1419 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1419
Description:

Target: scaffold1419; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 81
Target Start/End: Original strand, 338 - 374
Alignment:
Q  45 ctcgcgaggcgatggcctctactcgccatggcgagtt 81  Q
    |||||||||||| ||||||||||||||||||||||||    
T  338 ctcgcgaggcgagggcctctactcgccatggcgagtt 374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 179
Target Start/End: Complemental strand, 8267 - 8203
Alignment:
Q  116 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaa 179  Q
    |||||||||||||||||| ||| | ||||| ||||||||||||| | | ||||||||||||||||    
T  8267 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaa 8203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 199
Target Start/End: Complemental strand, 15213 - 15127
Alignment:
Q  114 tattccaggttcaatctcattctagaatcttttctaatcattatt--acatagttcaggcactcaaaaacctctaaggtccaacttaa 199  Q
    |||||||||||||||||||| ||| | ||||| ||||||||||||  ||||| || |||||||||||| | |||| ||| ||||||||    
T  15213 tattccaggttcaatctcatcctacattctttcctaatcattattagacata-ttaaggcactcaaaagcatctacggttcaacttaa 15127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 85
Target Start/End: Complemental strand, 1633 - 1562
Alignment:
Q  14 taacctaacaaagaattctgtaactgggtaactcgcgaggcgatggcctctactcgccatggcgagttcagg 85  Q
    ||||||||||| |  |||||||| |||| | ||| ||||||||  |||||||||||| ||||||||||||||    
T  1633 taacctaacaaggtgttctgtaattgggcatctcacgaggcgagagcctctactcgctatggcgagttcagg 1562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0540 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0540
Description:

Target: scaffold0540; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 37 - 179
Target Start/End: Complemental strand, 827 - 684
Alignment:
Q  37 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattct 136  Q
    |||||| |||||||||||||  |||||  ||| || ||||||||||||||   | | |||||| | ||||||  ||   || ||| ||||||||||||||    
T  827 ctgggtcactcgcgaggcgagagcctccgctcaccgtggcgagttcaggtcagatttccaaaagttcattctacaatcttttcagattcaatctcattct 728  T
Q  137 agaatcttttctaatcattattacata-gttcaggcactcaaaa 179  Q
    | | ||||| ||||||||||||| | | ||||||||||||||||    
T  727 acattctttcctaatcattattagacatgttcaggcactcaaaa 684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 212
Target Start/End: Complemental strand, 35625 - 35508
Alignment:
Q  96 aaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattatta--catagttcaggcactcaaaaacctctaaggtcca 193  Q
    ||||||||| | ||||||| |  ||||| | |||||| |||| || |||  |||||||||||||  |||| ||||||||||||||| | | |||||| ||    
T  35625 aaaaatccacttttaaactttctcaggtccgatctcaatctaaaaacttgcctaatcattattatacata-ttcaggcactcaaaatcatttaaggttca 35527  T
Q  194 acttaaggggcaaaactac 212  Q
    ||||||||| |||||||||    
T  35526 acttaagggacaaaactac 35508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 159
Target Start/End: Original strand, 268094 - 268157
Alignment:
Q  96 aaaaatccattcttaaactattccaggttcaatctcattctagaatcttttctaatcattatta 159  Q
    ||||||||||| ||||||| | ||||||||||||||| |||| || |||  |||||||||||||    
T  268094 aaaaatccatttttaaactttcccaggttcaatctcaatctaaaaacttgcctaatcattatta 268157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1137 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1137
Description:

Target: scaffold1137; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 189
Target Start/End: Complemental strand, 2108 - 1962
Alignment:
Q  44 actcgcgaggcgatggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcattctagaatct 143  Q
    |||||||||||||  |||||| || ||||||||||||||||||  |  || ||||| | |||||| ||    ||  | |||||||||||||||  |||||    
T  2108 actcgcgaggcgagagcctctgcttgccatggcgagttcaggttcagttcacaaaatttcattctaaagtctttttatgttcaatctcattctccaatct 2009  T
Q  144 tttctaatcattattacata-gttcaggcactcaaaaacctctaagg 189  Q
    || ||||||||||||| | | ||||||  |||||||||| |||||||    
T  2008 ttcctaatcattattagacatgttcagtgactcaaaaacatctaagg 1962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0484 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0484
Description:

Target: scaffold0484; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 196
Target Start/End: Original strand, 1288 - 1370
Alignment:
Q  115 attccaggttcaatctcattctagaatcttttctaatcattatta-catagttcaggcactcaaaaacctctaaggtccaact 196  Q
    ||||||||||||||||||| ||| | ||||| |||||||||||||  |  |||||||||||||||  | |||||||| |||||    
T  1288 attccaggttcaatctcatcctacattctttcctaatcattattagtaatgttcaggcactcaaaggcatctaaggttcaact 1370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0403 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0403
Description:

Target: scaffold0403; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 196
Target Start/End: Original strand, 5222 - 5304
Alignment:
Q  115 attccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 196  Q
    ||||||||||||||||||| ||| | ||||| ||||||||||||| | |  |||| |||||||||| | |||||||| |||||    
T  5222 attccaggttcaatctcatcctacattctttcctaatcattattagacatcttcatgcactcaaaagcatctaaggttcaact 5304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0389 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 196
Target Start/End: Complemental strand, 13340 - 13262
Alignment:
Q  119 caggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 196  Q
    |||| |||||||||| ||| | ||||| ||||||||||||| | | |||||||||||||||| | |||||||| |||||    
T  13340 caggctcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaact 13262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 196
Target Start/End: Original strand, 32438 - 32520
Alignment:
Q  115 attccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 196  Q
    ||||||||||||||||||| | | | ||||| ||| ||||||||| | | |||||||||||||||| | |||||||| |||||    
T  32438 attccaggttcaatctcatcccacattctttcctagtcattattagacatgttcaggcactcaaaagcatctaaggttcaact 32520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 196
Target Start/End: Original strand, 21275 - 21357
Alignment:
Q  115 attccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaaggtccaact 196  Q
    ||||||||| ||||||||| ||| | |||||  |||||||||||| | | ||||||||||| |||||| |||||||| |||||    
T  21275 attccaggtacaatctcatcctacattctttcataatcattattagacatgttcaggcactaaaaaacatctaaggttcaact 21357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 189
Target Start/End: Complemental strand, 39666 - 39592
Alignment:
Q  116 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaaacctctaagg 189  Q
    |||||||||||||||||||||| | ||||| |||||||||| || | | ||||||| |||||||| | |||||||    
T  39666 ttccaggttcaatctcattctacattctttcctaatcattaatagacatgttcaggtactcaaaagcatctaagg 39592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 179
Target Start/End: Original strand, 40242 - 40306
Alignment:
Q  116 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaa 179  Q
    |||||||||||||||||| ||  | ||||| ||||||||||||| | | ||||||||||||||||    
T  40242 ttccaggttcaatctcatcctccattctttcctaatcattattagacatgttcaggcactcaaaa 40306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 86
Target Start/End: Original strand, 39783 - 39832
Alignment:
Q  37 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggt 86  Q
    |||||| |||||||||||||  |||||| |||||| ||||||||||||||    
T  39783 ctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 39832  T

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Target: scaffold0049 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 86
Target Start/End: Complemental strand, 75029 - 74980
Alignment:
Q  37 ctgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggt 86  Q
    |||||| |||||||||||||  |||||| |||||| ||||||||||||||    
T  75029 ctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 74980  T

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Target: scaffold0309 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 86
Target Start/End: Original strand, 6917 - 6965
Alignment:
Q  38 tgggtaactcgcgaggcgatggcctctactcgccatggcgagttcaggt 86  Q
    ||||| |||||||||||||  |||||| |||||| ||||||||||||||    
T  6917 tgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 6965  T

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Target: scaffold0064 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 196
Target Start/End: Original strand, 47360 - 47442
Alignment:
Q  115 attccaggttcaatctcattctagaatcttttctaatcattatt--acatagttcaggcactcaaaaacctctaaggtccaact 196  Q
    ||||||||||||||||||| ||| | || || ||||||||||||  ||||| ||||| ||||||||| | |||||||| |||||    
T  47360 attccaggttcaatctcatcctacattcattcctaatcattattagacata-ttcagacactcaaaagcatctaaggttcaact 47442  T

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Target: scaffold0042 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 179
Target Start/End: Complemental strand, 24037 - 23973
Alignment:
Q  116 ttccaggttcaatctcattctagaatcttttctaatcattattacata-gttcaggcactcaaaa 179  Q
    |||||||||||||||||| ||| | | ||| ||||||||||||| | | ||||||||||||||||    
T  24037 ttccaggttcaatctcatcctacattttttcctaatcattattagacatgttcaggcactcaaaa 23973  T

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Target: scaffold0032 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 178
Target Start/End: Original strand, 51953 - 52017
Alignment:
Q  115 attccaggttcaatctcattctagaatcttttctaatcattattaca-tagttcaggcactcaaa 178  Q
    ||||||||||||||||| | ||| | ||||| ||||||||||||| | | |||||||||||||||    
T  51953 attccaggttcaatctcgtcctacattctttcctaatcattattagacttgttcaggcactcaaa 52017  T

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