View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20416_low_3 (Length: 342)
Name: NF20416_low_3
Description: NF20416
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20416_low_3 |
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Alignment Details
Target: chr4 (Bit Score: 74; Significance: 7e-34; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 70 - 162
Target Start/End: Original strand, 2167131 - 2167224
Alignment:
| Q |
70 |
aaagatatatattaaatgacatcacaaaaacatttcattgcttccatgag-gatgagcaacaaattaaatatcaaaatctgaattttgcataaa |
162 |
Q |
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||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2167131 |
aaagataaagattaaatgacatcacaaaaacatttcattgcttccatgatcgatgagcaacaaattaaatatcaaaatctgaattttgcataaa |
2167224 |
T |
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