View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20419_low_8 (Length: 239)
Name: NF20419_low_8
Description: NF20419
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20419_low_8 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 239; Significance: 1e-132; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 36723300 - 36723538
Alignment:
| Q |
1 |
caaaggactgaatgtttctcaaaaggaatagtttcccacgtacaagcacaacatgactttcgacaaataaggtgatagtagagagcaaccaaagaaggaa |
100 |
Q |
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| T |
36723300 |
caaaggactgaatgtttctcaaaaggaatagtttcccacgtacaagcacaacatgactttcgacaaataaggtgatagtagagagcaaccaaagaaggaa |
36723399 |
T |
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| Q |
101 |
caaaagatagtaatatatgcaaccaattgaggttgccattatattttgtgctgaaggcatacagatctatgagtattaggaagtgtttcttttatagtgg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36723400 |
caaaagatagtaatatatgcaaccaattgaggttgccattatattttgtgctgaaggcatacagatctatgagtattaggaagtgtttcttttatagtgg |
36723499 |
T |
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| Q |
201 |
cttgtcaaccatggaaaatgcaaacatgtgctaatatgt |
239 |
Q |
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||||||||||||||||||||||||||||||||||||||| |
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| T |
36723500 |
cttgtcaaccatggaaaatgcaaacatgtgctaatatgt |
36723538 |
T |
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