View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2041_high_6 (Length: 354)
Name: NF2041_high_6
Description: NF2041
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2041_high_6 |
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Alignment Details
Target: chr7 (Bit Score: 244; Significance: 1e-135; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 20 - 334
Target Start/End: Complemental strand, 30321599 - 30321286
Alignment:
| Q |
20 |
aggtccacactaatttcccttgtttttattactttttacaggaacagtaaatgatactaacaagataaaacaattacattttttgttgttgatataaata |
119 |
Q |
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| T |
30321599 |
aggtccacactaatttcccttgtttttattactttttacaggaacagtaaatgatactaacaagataaaacaattacattttttgttgttgatataaata |
30321500 |
T |
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| Q |
120 |
taaattttaattgacgtgttctggtaattactttaatcagtgtaaaaatatctaagatttnnnnnnnnnnnnnnnnnntatctttcacacattttactct |
219 |
Q |
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| T |
30321499 |
gaaattttaattgacgtgttctggtaattactttaatcagtgtaaaaatatctaagattt-aaaaaataaacaaaaaatatctctcacacattttactct |
30321401 |
T |
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| Q |
220 |
cttggatttaatcctttctagtctatatctattctctttgataaaattttagctctaaattaatttatggatcaaatttatcaaaattcaatcttttaag |
319 |
Q |
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| T |
30321400 |
cttggatttaatcctttctagtctatatctattctctttgataaaattttagctctaaattaatttatggatcaaatttatcaaaattcaatcttttaat |
30321301 |
T |
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| Q |
320 |
aatctaaactaagat |
334 |
Q |
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| T |
30321300 |
aatctaaactaagat |
30321286 |
T |
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