View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2041_low_7 (Length: 336)

Name: NF2041_low_7
Description: NF2041
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2041_low_7
NF2041_low_7
[»] chr7 (5 HSPs)
chr7 (24-212)||(18261986-18262174)
chr7 (20-212)||(33632060-33632252)
chr7 (209-336)||(18262827-18262954)
chr7 (209-336)||(33632906-33633033)
chr7 (20-155)||(7478725-7478860)
[»] chr4 (4 HSPs)
chr4 (20-212)||(3938844-3939036)
chr4 (209-294)||(3939679-3939764)
chr4 (118-212)||(5669533-5669627)
chr4 (49-122)||(5673251-5673324)
[»] chr5 (7 HSPs)
chr5 (20-212)||(41100239-41100431)
chr5 (20-155)||(7279436-7279571)
chr5 (24-180)||(39045837-39045993)
chr5 (25-201)||(13940687-13940863)
chr5 (130-212)||(7279342-7279424)
chr5 (70-201)||(27180342-27180474)
chr5 (230-314)||(27181154-27181238)
[»] scaffold0240 (1 HSPs)
scaffold0240 (20-212)||(16944-17135)
[»] chr3 (3 HSPs)
chr3 (20-212)||(30281078-30281270)
chr3 (209-336)||(3424242-3424369)
chr3 (209-336)||(30281923-30282050)
[»] chr2 (2 HSPs)
chr2 (209-336)||(35167925-35168052)
chr2 (125-212)||(35167186-35167272)
[»] chr6 (2 HSPs)
chr6 (20-212)||(23122638-23122830)
chr6 (20-212)||(1160713-1160905)


Alignment Details
Target: chr7 (Bit Score: 185; Significance: 1e-100; HSPs: 5)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 24 - 212
Target Start/End: Original strand, 18261986 - 18262174
Alignment:
Q  24 tgtttgaataagttttagaaccttctgaggaagcacaaaaacctgactccaataagtttgaacaccaaacaagactgatttgataagttgtaacctacca 123  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18261986 tgtttgaataagttttagaaccttctgaggaagcacaaaaacctgactccaataagtttgaacaccaaacaagactgatttgataagttgtaacctacca 18262085  T
Q  124 gcatacgataacaacttagaagaccaattttcgattctacaaatgatcctcttcaccaaaggttgacactgaataacagataatttttt 212  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18262086 gcatacgataacaacttaggagaccaattttcgattctacaaatgatcctcttcaccaaaggttgacactgaataacagataatttttt 18262174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 20 - 212
Target Start/End: Original strand, 33632060 - 33632252
Alignment:
Q  20 aagctgtttgaataagttttagaaccttctgaggaagcacaaaaacctgactccaataagtttgaacaccaaacaagactgatttgataagttgtaacct 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33632060 aagctgtttgaataagttttagaaccttctgaggaagcacaaaaacctgactccaataagtttgaacaccaaacaagactgatttgataagttgtaacct 33632159  T
Q  120 accagcatacgataacaacttagaagaccaattttcgattctacaaatgatcctcttcaccaaaggttgacactgaataacagataatttttt 212  Q
    ||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  33632160 accagcatacgataagaacttagaagaccaattttcgattctataaatgatcctcttcacctaaggttgacactgaataacaaataatttttt 33632252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 209 - 336
Target Start/End: Original strand, 18262827 - 18262954
Alignment:
Q  209 ttttcacttacaatactatttaagactccttgcattctgcttgttaaaattttagagataatcttataaatcactgtacaacaagcaatgggcctaaaat 308  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  18262827 ttttcacttacaacactatttaagactccttgcattctgcttgttaaaattttagaaataatcttataaatcactgaacaacaagcaatgggcctaaaat 18262926  T
Q  309 tcttaactgatgtaacattaacttcttt 336  Q
    ||||||||||||||||||||||||||||    
T  18262927 tcttaactgatgtaacattaacttcttt 18262954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 209 - 336
Target Start/End: Original strand, 33632906 - 33633033
Alignment:
Q  209 ttttcacttacaatactatttaagactccttgcattctgcttgttaaaattttagagataatcttataaatcactgtacaacaagcaatgggcctaaaat 308  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  33632906 ttttcacttacaacactatttaagactccttgcattctgcttgttaaaattttagaaataatcttataaatcactgaacaacaagcaatgggcctaaaat 33633005  T
Q  309 tcttaactgatgtaacattaacttcttt 336  Q
    ||||||||||||||||||||||||||||    
T  33633006 tcttaactgatgtaacattaacttcttt 33633033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 155
Target Start/End: Original strand, 7478725 - 7478860
Alignment:
Q  20 aagctgtttgaataagttttagaaccttctgaggaagcacaaaaacctgactccaataagtttgaacaccaaacaagactgatttgataagttgtaacct 119  Q
    |||| |||||||||||||| | ||| || | ||||||   ||| || || |||||||||||||| |||||||| || ||||| || ||||||||||| ||    
T  7478725 aagcagtttgaataagtttcaaaacttttttaggaagggtaaagacttggctccaataagtttgcacaccaaataacactgacttaataagttgtaatct 7478824  T
Q  120 accagcatacgataacaacttagaagaccaattttc 155  Q
     || ||||| ||||||||||| || ||||| |||||    
T  7478825 tccggcataagataacaactttgatgaccagttttc 7478860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 181; Significance: 9e-98; HSPs: 4)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 181; E-Value: 9e-98
Query Start/End: Original strand, 20 - 212
Target Start/End: Original strand, 3938844 - 3939036
Alignment:
Q  20 aagctgtttgaataagttttagaaccttctgaggaagcacaaaaacctgactccaataagtttgaacaccaaacaagactgatttgataagttgtaacct 119  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3938844 aagctgtttgaataagttttagcaccttctgaggaagcacaaaaacctgactccaataagtttgaacaccaaacaagactgatttgataagttgtaacct 3938943  T
Q  120 accagcatacgataacaacttagaagaccaattttcgattctacaaatgatcctcttcaccaaaggttgacactgaataacagataatttttt 212  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3938944 accagcatacgataacaacttagaatgccaattttcgattctacaaatgatcctcttcaccaaaggttgacactgaataacagataatttttt 3939036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 209 - 294
Target Start/End: Original strand, 3939679 - 3939764
Alignment:
Q  209 ttttcacttacaatactatttaagactccttgcattctgcttgttaaaattttagagataatcttataaatcactgtacaacaagc 294  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||    
T  3939679 ttttcacttacaacactatttaagactccttgcattctgcttgttaaaattttagaaataatcttatatatcactgaacaacaagc 3939764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 118 - 212
Target Start/End: Complemental strand, 5669627 - 5669533
Alignment:
Q  118 ctaccagcatacgataacaacttagaagaccaattttcgattctacaaatgatcctcttcaccaaaggttgacactgaataacagataatttttt 212  Q
    ||||||||||| |||||||||||||| ||||||||||| || |||| ||| ||||||||||| ||||| | ||| || |||||||| | ||||||    
T  5669627 ctaccagcatatgataacaacttagaggaccaattttcaatcctactaattatcctcttcactaaaggctaacattgcataacagacagtttttt 5669533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 122
Target Start/End: Complemental strand, 5673324 - 5673251
Alignment:
Q  49 tgaggaagcacaaaaacctgactccaataagtttgaacaccaaacaagactgatttgataagttgtaacctacc 122  Q
    ||||||||  |||| || || |||||||||||||| ||||||||||| ||||| || |||||||| || |||||    
T  5673324 tgaggaagagcaaatacttggctccaataagtttgcacaccaaacaacactgacttaataagttgcaatctacc 5673251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 177; Significance: 2e-95; HSPs: 7)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 20 - 212
Target Start/End: Original strand, 41100239 - 41100431
Alignment:
Q  20 aagctgtttgaataagttttagaaccttctgaggaagcacaaaaacctgactccaataagtttgaacaccaaacaagactgatttgataagttgtaacct 119  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41100239 aagctgtttgaataagttttagaaccttctgaggaagtacaaaaacctgactccaataagtttgaacaccaaacaagactgatttgataagttgtaacct 41100338  T
Q  120 accagcatacgataacaacttagaagaccaattttcgattctacaaatgatcctcttcaccaaaggttgacactgaataacagataatttttt 212  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  41100339 actagcatacgataacaacttagaagaccaattttcgattctacaaatgatcctcttcaccagaggttgacactgaataacaaataatttttt 41100431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 20 - 155
Target Start/End: Complemental strand, 7279571 - 7279436
Alignment:
Q  20 aagctgtttgaataagttttagaaccttctgaggaagcacaaaaacctgactccaataagtttgaacaccaaacaagactgatttgataagttgtaacct 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7279571 aagctgtttgaataagttttagaaccttctgaggaagcacaaaaacctgactccaataagtttgaacaccaaacaagactgatttgataagttgtaacct 7279472  T
Q  120 accagcatacgataacaacttagaagaccaattttc 155  Q
     |||||||||||||||||||| ||||||||||||||    
T  7279471 tccagcatacgataacaacttggaagaccaattttc 7279436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 24 - 180
Target Start/End: Original strand, 39045837 - 39045993
Alignment:
Q  24 tgtttgaataagttttagaaccttctgaggaagcacaaaaacctgactccaataagtttgaacaccaaacaagactgatttgataagttgtaacctacca 123  Q
    ||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||| ||||||||||||||||||   ||||||||||||||| ||||||    
T  39045837 tgtttgaataagttttataactttctaaggaagcacaaaaacctgactccaataaggttgaacaccaaacaagacaattttgataagttgtaagctacca 39045936  T
Q  124 gcatacgataacaacttagaagaccaattttcgattctacaaatgatcctcttcacc 180  Q
    ||||| ||||||||||||||||| |||||||| ||||||||||||||| ||||||||    
T  39045937 gcataagataacaacttagaagatcaattttcaattctacaaatgatcttcttcacc 39045993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 25 - 201
Target Start/End: Complemental strand, 13940863 - 13940687
Alignment:
Q  25 gtttgaataagttttagaaccttctgaggaagcacaaaaacctgactccaataagtttgaacaccaaacaagactgatttgataagttgtaacctaccag 124  Q
    |||||||| | ||| || || |||||||||||   ||| || || |||||||||||||| ||||||||||| ||||| || |||||||| || ||||||     
T  13940863 gtttgaattaatttaaggactttctgaggaagagaaaatacttggctccaataagtttgcacaccaaacaacactgacttaataagttgcaatctaccaa 13940764  T
Q  125 catacgataacaacttagaagaccaattttcgattctacaaatgatcctcttcaccaaaggttgacactgaataaca 201  Q
    |||| |||||||||||||| ||||||||||| || |||| ||| || |||||||| |||||||||||||| ||||||    
T  13940763 cataggataacaacttagaggaccaattttcaatcctactaattattctcttcactaaaggttgacactgcataaca 13940687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 130 - 212
Target Start/End: Complemental strand, 7279424 - 7279342
Alignment:
Q  130 gataacaacttagaagaccaattttcgattctacaaatgatcctcttcaccaaaggttgacactgaataacagataatttttt 212  Q
    ||||||||||| |||||||||||||| ||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||    
T  7279424 gataacaacttggaagaccaattttcaattctacaaatgatcttcttcgccaaaggttgacactgaataacaaataatttttt 7279342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 70 - 201
Target Start/End: Original strand, 27180342 - 27180474
Alignment:
Q  70 ctccaataagtttgaacaccaaacaagactgatttgataagttgtaacctaccagcatacgataacaacttagaagaccaattttcgattctacaaatga 169  Q
    |||||||| ||||| ||||||||||| ||| | || |||||||| || ||||||||||| |||||||||||| | ||||||||||| || |||| ||| |    
T  27180342 ctccaatatgtttgcacaccaaacaacactaacttaataagttgcaatctaccagcataggataacaacttaaaggaccaattttcaatcctactaatta 27180441  T
Q  170 tcctcttcac-caaaggttgacactgaataaca 201  Q
    | ||||||||  ||||| |||||||| ||||||    
T  27180442 ttctcttcactaaaaggctgacactgcataaca 27180474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 230 - 314
Target Start/End: Original strand, 27181154 - 27181238
Alignment:
Q  230 aagactccttgcattctgcttgttaaaattttagagataatcttataaatcactgtacaacaagcaatgggcctaaaattcttaa 314  Q
    ||||| |||||||||||  |||||| ||||||||||||||||||||||||||| |  |||||||| || || ||||| |||||||    
T  27181154 aagacaccttgcattctatttgttataattttagagataatcttataaatcacagagcaacaagctataggtctaaagttcttaa 27181238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 173; Significance: 5e-93; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 20 - 212
Target Start/End: Complemental strand, 17135 - 16944
Alignment:
Q  20 aagctgtttgaataagttttagaaccttctgaggaagcacaaaaacctgactccaataagtttgaacaccaaacaagactgatttgataagttgtaacct 119  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17135 aagctgtttgaataagttttagaaccttatgaggaagcacaaaaacctgactccaataagtttgaacaccaaacaagactgatttgataagttgtaacct 17036  T
Q  120 accagcatacgataacaacttagaagaccaattttcgattctacaaatgatcctcttcaccaaaggttgacactgaataacagataatttttt 212  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  17035 accagcatac-ataacaacctagaagaccaattttcgattctacaaataatcctcttcaccaaaggttgacactgaataacagataatttttt 16944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 173; Significance: 5e-93; HSPs: 3)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 20 - 212
Target Start/End: Original strand, 30281078 - 30281270
Alignment:
Q  20 aagctgtttgaataagttttagaaccttctgaggaagcacaaaaacctgactccaataagtttgaacaccaaacaagactgatttgataagttgtaacct 119  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30281078 aagctgtttgaataagttttagcaccttctgaggaagcacaaaaacctgactccaataagtttgaacaccaaacaagactgatttgataagttgtaacct 30281177  T
Q  120 accagcatacgataacaacttagaagaccaattttcgattctacaaatgatcctcttcaccaaaggttgacactgaataacagataatttttt 212  Q
    ||||||||||||||||| |||||||  ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  30281178 accagcatacgataacatcttagaattccaattttcgattctacaaattatcctcttcaccaaaggttgacactgaataacagataatttttt 30281270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 209 - 336
Target Start/End: Original strand, 3424242 - 3424369
Alignment:
Q  209 ttttcacttacaatactatttaagactccttgcattctgcttgttaaaattttagagataatcttataaatcactgtacaacaagcaatgggcctaaaat 308  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  3424242 ttttcacttacaacactatttaagactccttgcattctgcttgttaaaattttagaaataatcttataaatcactgaacaacaagcaatgggcctaaaat 3424341  T
Q  309 tcttaactgatgtaacattaacttcttt 336  Q
    ||||||||||||||||||||||||||||    
T  3424342 tcttaactgatgtaacattaacttcttt 3424369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 209 - 336
Target Start/End: Original strand, 30281923 - 30282050
Alignment:
Q  209 ttttcacttacaatactatttaagactccttgcattctgcttgttaaaattttagagataatcttataaatcactgtacaacaagcaatgggcctaaaat 308  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| |||||||||||||    
T  30281923 ttttcacttacaacactatttaagactccttgcattctgcttgttaaaattttagaaataatcttataaatcactgaacaacaagctatgggcctaaaat 30282022  T
Q  309 tcttaactgatgtaacattaacttcttt 336  Q
    ||||||||||||||||||||||||||||    
T  30282023 tcttaactgatgtaacattaacttcttt 30282050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 80; Significance: 2e-37; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 209 - 336
Target Start/End: Original strand, 35167925 - 35168052
Alignment:
Q  209 ttttcacttacaatactatttaagactccttgcattctgcttgttaaaattttagagataatcttataaatcactgtacaacaagcaatgggcctaaaat 308  Q
    |||||||| |||| |||||||||||||||||||||||  ||||||| |||||| || ||||||||||| ||||||| |||||| ||||||||||||||||    
T  35167925 ttttcactaacaacactatttaagactccttgcattcaacttgttagaattttggaaataatcttatatatcactgaacaacaggcaatgggcctaaaat 35168024  T
Q  309 tcttaactgatgtaacattaacttcttt 336  Q
    |||||||||||||| ||||| |||||||    
T  35168025 tcttaactgatgtatcattagcttcttt 35168052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 125 - 212
Target Start/End: Original strand, 35167186 - 35167272
Alignment:
Q  125 catacgataacaacttagaagaccaattttcgattctacaaatgatcctcttcaccaaaggttgacactgaataacagataatttttt 212  Q
    ||||||||| ||| || |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||    
T  35167186 catacgata-caaattggaagaccaattttcaattctacaaatgatcttcttcaccaaaggttgacactgaataacatataatttttt 35167272  T

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Target: chr6 (Bit Score: 49; Significance: 5e-19; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 20 - 212
Target Start/End: Complemental strand, 23122830 - 23122638
Alignment:
Q  20 aagctgtttgaataagttttagaaccttctgaggaagcacaaaaacctgactccaataagtttgaacaccaaacaagactgatttgataagttgtaacct 119  Q
    |||| |||||||||||||| | ||| || | ||||||  |||| || || |||||||||||||| |||||||| || ||||| || ||||||||||| ||    
T  23122830 aagccgtttgaataagtttcaaaacttttttaggaagggcaaagacttggctccaataagtttgcacaccaaataacactgacttaataagttgtaatct 23122731  T
Q  120 accagcatacgataacaacttagaagaccaattttcgattctacaaatgatcctcttcaccaaaggttgacactgaataacagataatttttt 212  Q
     || ||||| ||||||||||| || ||||| ||||| || || |  || ||  |||| |||||||||||||| || |||| || |||||||||    
T  23122730 tccggcataagataacaactttgatgaccagttttcaatcctgctgataattttctttaccaaaggttgacattgcataatagttaatttttt 23122638  T

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Target: chr6; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 212
Target Start/End: Complemental strand, 1160905 - 1160713
Alignment:
Q  20 aagctgtttgaataagttttagaaccttctgaggaagcacaaaaacctgactccaataagtttgaacaccaaacaagactgatttgataagttgtaacct 119  Q
    |||| |||||||||||||| | ||| || | ||||||   ||| || || || ||||||||||| |||||||| || ||||| || ||||||||||| ||    
T  1160905 aagcagtttgaataagtttcaaaacttttttaggaaggggaaagacttggctgcaataagtttgcacaccaaataacactgacttaataagttgtaatct 1160806  T
Q  120 accagcatacgataacaacttagaagaccaattttcgattctacaaatgatcctcttcaccaaaggttgacactgaataacagataatttttt 212  Q
     || ||||| ||||||||||| || ||||| ||||| || || |  || ||  |||| |||||||||||||| || ||||||| |||||||||    
T  1160805 tccggcataagataacaactttgatgaccagttttcaatcctgctgataattttctttaccaaaggttgacattgcataacagttaatttttt 1160713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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