View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20420_low_27 (Length: 247)
Name: NF20420_low_27
Description: NF20420
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20420_low_27 |
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Alignment Details
Target: chr8 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 36333615 - 36333381
Alignment:
| Q |
1 |
ggggtccaccgaaatcggatcggagggaggtcatgagcttggtaaggcggtcgcgtacgtcttctggtgggatcgcccacactgaatacacctccttctt |
100 |
Q |
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| T |
36333615 |
ggggtccaccgaaatcggatcggagggaggtcatgagcttggtaaggcggtcgcgtacgtcttccggtgggatcgcccacactgaatacacctccttctt |
36333516 |
T |
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| Q |
101 |
tgttgatgatgttgccatttggaatatcaatcacctccttcttgtcgattgtcacagtcacagtcacagggtttctttctttcccttaaaacatgtgaat |
200 |
Q |
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| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36333515 |
tattgatgatgttgccatttggaatatcaatcacctccttcttgtcgattgtcacagtcacagtcacagggtttctttctttcccttaaaacatgtgaat |
36333416 |
T |
|
| Q |
201 |
agtccatgtgccacatgctccgcatattccctctc |
235 |
Q |
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||||||||||||||||||||||||||||||||||| |
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| T |
36333415 |
agtccatgtgccacatgctccgcatattccctctc |
36333381 |
T |
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