View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20420_low_38 (Length: 201)

Name: NF20420_low_38
Description: NF20420
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20420_low_38
NF20420_low_38
[»] chr2 (26 HSPs)
chr2 (1-184)||(7201519-7201701)
chr2 (2-50)||(38835240-38835288)
chr2 (1-60)||(4417181-4417240)
chr2 (1-50)||(2256983-2257032)
chr2 (3-59)||(23407008-23407065)
chr2 (1-49)||(12124696-12124744)
chr2 (1-60)||(22558989-22559049)
chr2 (1-60)||(33063998-33064058)
chr2 (2-50)||(41187457-41187505)
chr2 (1-49)||(41668667-41668715)
chr2 (1-36)||(7350558-7350593)
chr2 (1-32)||(18789427-18789458)
chr2 (1-56)||(25598556-25598611)
chr2 (2-32)||(24579686-24579716)
chr2 (1-43)||(34977216-34977258)
chr2 (1-50)||(24593388-24593437)
chr2 (1-50)||(38603964-38604013)
chr2 (1-50)||(40896509-40896558)
chr2 (11-47)||(4056812-4056848)
chr2 (1-60)||(6765622-6765682)
chr2 (1-49)||(12124557-12124605)
chr2 (1-33)||(15462889-15462921)
chr2 (12-59)||(17142853-17142901)
chr2 (1-59)||(19976165-19976225)
chr2 (4-59)||(20455906-20455962)
chr2 (1-60)||(41778933-41778993)
[»] chr3 (22 HSPs)
chr3 (2-50)||(46483260-46483308)
chr3 (1-50)||(41817511-41817560)
chr3 (1-49)||(10498696-10498744)
chr3 (1-44)||(977947-977990)
chr3 (1-32)||(2153519-2153550)
chr3 (1-59)||(7827520-7827579)
chr3 (1-32)||(9321423-9321454)
chr3 (1-36)||(24428487-24428522)
chr3 (1-59)||(53996311-53996370)
chr3 (12-50)||(46226025-46226063)
chr3 (1-50)||(4601856-4601905)
chr3 (12-60)||(7824830-7824879)
chr3 (13-50)||(14160278-14160315)
chr3 (1-50)||(25441500-25441549)
chr3 (11-60)||(25505691-25505740)
chr3 (1-50)||(32843262-32843311)
chr3 (1-50)||(35191817-35191866)
chr3 (1-50)||(38130959-38131008)
chr3 (1-50)||(44579648-44579697)
chr3 (11-59)||(47039449-47039498)
chr3 (1-49)||(14741806-14741854)
chr3 (1-60)||(52575959-52576019)
[»] chr8 (17 HSPs)
chr8 (1-50)||(38763515-38763564)
chr8 (1-50)||(32051532-32051581)
chr8 (1-44)||(6447201-6447244)
chr8 (1-59)||(29376913-29376972)
chr8 (1-32)||(43240346-43240377)
chr8 (1-58)||(27718885-27718943)
chr8 (10-48)||(44602618-44602656)
chr8 (1-50)||(7433152-7433201)
chr8 (1-50)||(8461836-8461885)
chr8 (1-50)||(12748913-12748962)
chr8 (1-50)||(30623305-30623354)
chr8 (12-49)||(32223880-32223917)
chr8 (13-50)||(42367753-42367790)
chr8 (1-56)||(4830020-4830076)
chr8 (1-60)||(12800889-12800949)
chr8 (2-50)||(22775641-22775689)
chr8 (2-50)||(32192907-32192955)
[»] chr7 (22 HSPs)
chr7 (1-56)||(47342427-47342483)
chr7 (11-50)||(34809367-34809406)
chr7 (1-59)||(10244739-10244797)
chr7 (1-50)||(27263353-27263402)
chr7 (1-49)||(27270247-27270295)
chr7 (1-32)||(19626543-19626574)
chr7 (1-44)||(23413052-23413095)
chr7 (1-59)||(37624555-37624614)
chr7 (1-50)||(7872748-7872797)
chr7 (13-50)||(9139477-9139514)
chr7 (1-50)||(19599157-19599206)
chr7 (1-50)||(27462436-27462485)
chr7 (11-48)||(33610927-33610964)
chr7 (1-58)||(40808151-40808208)
chr7 (1-50)||(46987098-46987147)
chr7 (11-59)||(48527212-48527261)
chr7 (13-60)||(3671848-3671896)
chr7 (1-49)||(7670446-7670494)
chr7 (1-60)||(10026006-10026066)
chr7 (1-29)||(34448631-34448659)
chr7 (1-60)||(35142138-35142198)
chr7 (1-49)||(45200205-45200253)
[»] chr6 (6 HSPs)
chr6 (1-36)||(3358403-3358438)
chr6 (1-50)||(2726417-2726466)
chr6 (1-50)||(655749-655798)
chr6 (1-50)||(9111059-9111108)
chr6 (1-50)||(20744150-20744199)
chr6 (1-29)||(9677247-9677275)
[»] chr5 (16 HSPs)
chr5 (1-44)||(20688052-20688095)
chr5 (11-59)||(8544979-8545028)
chr5 (1-50)||(37932342-37932391)
chr5 (1-59)||(33645681-33645738)
chr5 (1-50)||(5846041-5846090)
chr5 (1-50)||(6624788-6624837)
chr5 (1-50)||(18489076-18489125)
chr5 (1-50)||(24408507-24408556)
chr5 (1-50)||(26409265-26409314)
chr5 (1-50)||(26655476-26655525)
chr5 (1-50)||(26927061-26927110)
chr5 (15-59)||(7713558-7713602)
chr5 (4-59)||(12611025-12611081)
chr5 (1-49)||(17239382-17239430)
chr5 (1-49)||(31708147-31708195)
chr5 (1-60)||(32283591-32283651)
[»] chr4 (25 HSPs)
chr4 (1-60)||(8020638-8020696)
chr4 (1-50)||(675930-675979)
chr4 (1-50)||(2649733-2649782)
chr4 (1-50)||(14577507-14577556)
chr4 (1-50)||(52132302-52132351)
chr4 (2-50)||(21991247-21991295)
chr4 (1-59)||(11949753-11949812)
chr4 (1-59)||(24664981-24665040)
chr4 (1-59)||(32180842-32180901)
chr4 (1-32)||(55421587-55421618)
chr4 (1-47)||(12698609-12698655)
chr4 (1-50)||(3936639-3936688)
chr4 (1-50)||(20383500-20383549)
chr4 (1-50)||(44221459-44221508)
chr4 (1-50)||(49473657-49473706)
chr4 (1-49)||(6459925-6459973)
chr4 (1-60)||(9946439-9946499)
chr4 (1-49)||(19854577-19854625)
chr4 (1-60)||(29681446-29681506)
chr4 (1-49)||(29908068-29908116)
chr4 (11-39)||(36489399-36489427)
chr4 (2-50)||(38374970-38375018)
chr4 (2-50)||(47806256-47806304)
chr4 (1-49)||(48955304-48955352)
chr4 (11-51)||(49308842-49308882)
[»] chr1 (20 HSPs)
chr1 (2-60)||(32944749-32944808)
chr1 (1-58)||(13590122-13590179)
chr1 (1-50)||(26803451-26803500)
chr1 (1-50)||(42045372-42045421)
chr1 (11-50)||(29987112-29987151)
chr1 (11-49)||(64679-64717)
chr1 (1-58)||(5279361-5279419)
chr1 (11-49)||(9639818-9639856)
chr1 (15-60)||(10356704-10356749)
chr1 (1-50)||(14520956-14521005)
chr1 (1-50)||(18166614-18166663)
chr1 (1-50)||(25532985-25533034)
chr1 (2-59)||(40661746-40661802)
chr1 (1-50)||(42888587-42888636)
chr1 (1-49)||(10132445-10132493)
chr1 (12-60)||(29251777-29251825)
chr1 (1-49)||(30382508-30382556)
chr1 (12-59)||(32864315-32864363)
chr1 (13-60)||(32950750-32950798)
chr1 (1-49)||(34521191-34521239)
[»] scaffold0005 (1 HSPs)
scaffold0005 (1-50)||(239819-239868)
[»] scaffold0735 (1 HSPs)
scaffold0735 (1-50)||(1540-1589)
[»] scaffold0012 (1 HSPs)
scaffold0012 (1-58)||(118831-118888)
[»] scaffold0743 (1 HSPs)
scaffold0743 (1-60)||(1408-1468)
[»] scaffold0118 (1 HSPs)
scaffold0118 (1-49)||(45424-45472)


Alignment Details
Target: chr2 (Bit Score: 120; Significance: 1e-61; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 7201519 - 7201701
Alignment:
Q  1 cagttggtttggacaatgcataatatatgcaaagtcaggagttcgaacccgaccaccaccnnnnnnnngttctgggctccaaactcggacaaaactttga 100  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||        ||| ||||||||||| ||||||||| ||||||    
T  7201519 cagttggtttgaacaatgcataatatatgcaaagtctggagttcgaacccgaccaccaccaaaaaaaagttttgggctccaaattcggacaaa-ctttga 7201617  T
Q  101 ccgcaggtagcaagacaactctctaagcttttgttgggccgaaaagatagggttatttttcatacttttctattgtcctatgaa 184  Q
    ||||| ||||||| |||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  7201618 ccgcaagtagcaaaacaactctctaagcttttgtcgggccgaaaagatagggtcatttttcatacttttctattgtcctatgaa 7201701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 38835288 - 38835240
Alignment:
Q  2 agttggtttggacaatgcataatatatgcaaagtcaggagttcgaaccc 50  Q
    |||||||  ||||||||||||||||||||||||||||||||| ||||||    
T  38835288 agttggtaaggacaatgcataatatatgcaaagtcaggagtttgaaccc 38835240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 4417181 - 4417240
Alignment:
Q  1 cagttggtttggacaatgcataatatatgcaaagtcaggagttcgaacccgaccaccacc 60  Q
    ||||| |||||||||||||||||||||| ||| ||| | |||||||| ||||||||||||    
T  4417181 cagttcgtttggacaatgcataatatatacaatgtctgaagttcgaatccgaccaccacc 4417240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 2256983 - 2257032
Alignment:
Q  1 cagttggtttggacaatgcataatatatgcaaagtcaggagttcgaaccc 50  Q
    |||||||| ||||||||||||||||||||||| ||| || ||||||||||    
T  2256983 cagttggtatggacaatgcataatatatgcaaggtctggggttcgaaccc 2257032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 59
Target Start/End: Complemental strand, 23407065 - 23407008
Alignment:
Q  3 gttggtttggacaatgcataatatatgcaaagtcaggagttcgaaccc-gaccaccac 59  Q
    |||||||||||||||||||||||||||||| ||| || |||| ||||| |||||||||    
T  23407065 gttggtttggacaatgcataatatatgcaaggtctggggttcaaaccctgaccaccac 23407008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 12124696 - 12124744
Alignment:
Q  1 cagttggtttggacaatgcataatatatgcaaagtcaggagttcgaacc 49  Q
    ||||||||  |||||||||||||||||||||| ||| ||||||||||||    
T  12124696 cagttggtaaggacaatgcataatatatgcaaggtccggagttcgaacc 12124744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 22558989 - 22559049
Alignment:
Q  1 cagttggtttggacaatgcataatatatgcaaagtcaggagttc-gaacccgaccaccacc 60  Q
    ||||||||||||||||||||||| |||| ||| ||| |||||||  |||||||||||||||    
T  22558989 cagttggtttggacaatgcataaaatatacaaggtctggagttcaaaacccgaccaccacc 22559049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 33063998 - 33064058
Alignment:
Q  1 cagttggtttggacaatgcataatatatgcaaagtcaggagttcgaac-ccgaccaccacc 60  Q
    |||||| | ||||||||||||||||||||||| ||| ||||||||||| ||| ||||||||    
T  33063998 cagttgatatggacaatgcataatatatgcaaggtccggagttcgaactccggccaccacc 33064058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 41187505 - 41187457
Alignment:
Q  2 agttggtttggacaatgcataatatatgcaaagtcaggagttcgaaccc 50  Q
    ||||||| |||||||||||||| |||||||||||| || ||||||||||    
T  41187505 agttggtatggacaatgcataaaatatgcaaagtccggggttcgaaccc 41187457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 41668667 - 41668715
Alignment:
Q  1 cagttggtttggacaatgcataatatatgcaaagtcaggagttcgaacc 49  Q
    |||||||| || |||||||||||||||||||||||| || |||||||||    
T  41668667 cagttggtatgaacaatgcataatatatgcaaagtctggcgttcgaacc 41668715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 7350558 - 7350593
Alignment:
Q  1 cagttggtttggacaatgcataatatatgcaaagtc 36  Q
    |||||||| |||||||||||||||||||||||||||    
T  7350558 cagttggtatggacaatgcataatatatgcaaagtc 7350593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 18789427 - 18789458
Alignment:
Q  1 cagttggtttggacaatgcataatatatgcaa 32  Q
    ||||||||||||||||||||||||||||||||    
T  18789427 cagttggtttggacaatgcataatatatgcaa 18789458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 25598611 - 25598556
Alignment:
Q  1 cagttggtttggacaatgcataatatatgcaaagtcaggagttcgaacccgaccac 56  Q
    |||||||| ||||||||||||||||||||||| |||  | ||||||||||| ||||    
T  25598611 cagttggtatggacaatgcataatatatgcaaggtccagggttcgaacccggccac 25598556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 32
Target Start/End: Complemental strand, 24579716 - 24579686
Alignment:
Q  2 agttggtttggacaatgcataatatatgcaa 32  Q
    |||||||||||||||||||||||||||||||    
T  24579716 agttggtttggacaatgcataatatatgcaa 24579686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 34977216 - 34977258
Alignment:
Q  1 cagttggtttggacaatgcataatatatgcaaagtcaggagtt 43  Q
    |||||||| ||||||||||||||||||||||| ||| ||||||    
T  34977216 cagttggtatggacaatgcataatatatgcaaggtccggagtt 34977258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 24593388 - 24593437
Alignment:
Q  1 cagttggtttggacaatgcataatatatgcaaagtcaggagttcgaaccc 50  Q
    ||||||||  |||||||||||||||||||||| ||| || ||||||||||    
T  24593388 cagttggtaaggacaatgcataatatatgcaaggtccggggttcgaaccc 24593437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 38604013 - 38603964
Alignment:
Q  1 cagttggtttggacaatgcataatatatgcaaagtcaggagttcgaaccc 50  Q
    ||||||||| |||||||| |||| |||||||| ||||||||||| |||||    
T  38604013 cagttggttgggacaatgtataaaatatgcaaggtcaggagttcaaaccc 38603964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 40896558 - 40896509
Alignment:
Q  1 cagttggtttggacaatgcataatatatgcaaagtcaggagttcgaaccc 50  Q
    |||||||| | ||||||||||||||||| ||||||| | |||||||||||    
T  40896558 cagttggtatagacaatgcataatatatacaaagtctgaagttcgaaccc 40896509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 47
Target Start/End: Original strand, 4056812 - 4056848
Alignment:
Q  11 ggacaatgcataatatatgcaaagtcaggagttcgaa 47  Q
    |||||||||||||||||||||| ||| ||||||||||    
T  4056812 ggacaatgcataatatatgcaaggtccggagttcgaa 4056848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 6765622 - 6765682
Alignment:
Q  1 cagttggtttggacaatgcataatatatgcaaagtcaggagttcgaacc-cgaccaccacc 60  Q
    |||||||| |||||||||||||| ||||| || ||| || ||||||||| |||||||||||    
T  6765622 cagttggtatggacaatgcataaaatatgtaaggtccggggttcgaaccacgaccaccacc 6765682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 12124557 - 12124605
Alignment:
Q  1 cagttggtttggacaatgcataatatatgcaaagtcaggagttcgaacc 49  Q
    ||||||||  |||||||||||||||||||||| ||| || |||||||||    
T  12124557 cagttggtaaggacaatgcataatatatgcaaggtccggggttcgaacc 12124605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 15462889 - 15462921
Alignment:
Q  1 cagttggtttggacaatgcataatatatgcaaa 33  Q
    |||||||| ||||||||||||||||||||||||    
T  15462889 cagttggtatggacaatgcataatatatgcaaa 15462921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 59
Target Start/End: Original strand, 17142853 - 17142901
Alignment:
Q  12 gacaatgcataatatatgcaaagtcaggagttcgaa-cccgaccaccac 59  Q
    ||||||| ||||||||||||||||| ||||||| || ||||||||||||    
T  17142853 gacaatgtataatatatgcaaagtctggagttcaaaccccgaccaccac 17142901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 19976165 - 19976225
Alignment:
Q  1 cagttggtttggacaatgcataat-atatgcaaagtcaggagttcgaacc-cgaccaccac 59  Q
    |||||||| ||||||||||||||| |||||||| ||| || ||||||||| ||||||||||    
T  19976165 cagttggtatggacaatgcataataatatgcaaggtccggggttcgaacctcgaccaccac 19976225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 59
Target Start/End: Original strand, 20455906 - 20455962
Alignment:
Q  4 ttggtttggacaatgcataatatatgcaaagtcaggagttcgaa-cccgaccaccac 59  Q
    ||||| ||||||||||||||||||||||| ||| || ||||||| |||| |||||||    
T  20455906 ttggtatggacaatgcataatatatgcaaggtccggggttcgaatcccggccaccac 20455962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 41778993 - 41778933
Alignment:
Q  1 cagttggtttggacaatgcataatatatgcaaagtcaggagttcgaa-cccgaccaccacc 60  Q
    |||||| ||||||||||||||||||||||||| ||| |  ||||||| |||| ||||||||    
T  41778993 cagttgatttggacaatgcataatatatgcaaggtccgaggttcgaatcccggccaccacc 41778933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 46483260 - 46483308
Alignment:
Q  2 agttggtttggacaatgcataatatatgcaaagtcaggagttcgaaccc 50  Q
    ||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  46483260 agttggtatggacaatgcataatatatgcaaagtccggagttcgaaccc 46483308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 41817511 - 41817560
Alignment:
Q  1 cagttggtttggacaatgcataatatatgcaaagtcaggagttcgaaccc 50  Q
    |||||||||||||||||||||||||||||||| ||| || |||| |||||    
T  41817511 cagttggtttggacaatgcataatatatgcaaggtccggggttcaaaccc 41817560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 10498744 - 10498696
Alignment:
Q  1 cagttggtttggacaatgcataatatatgcaaagtcaggagttcgaacc 49  Q
    |||||||| ||||||||||||||||||||||| |||| |||||| ||||    
T  10498744 cagttggtatggacaatgcataatatatgcaaggtcatgagttcaaacc 10498696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 977990 - 977947
Alignment:
Q  1 cagttggtttggacaatgcataatatatgcaaagtcaggagttc 44  Q
    |||||||| ||||||||||||||||||||||| ||| |||||||    
T  977990 cagttggtatggacaatgcataatatatgcaaggtccggagttc 977947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 2153550 - 2153519
Alignment:
Q  1 cagttggtttggacaatgcataatatatgcaa 32  Q
    ||||||||||||||||||||||||||||||||    
T  2153550 cagttggtttggacaatgcataatatatgcaa 2153519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 7827520 - 7827579
Alignment:
Q  1 cagttggtttggacaatgcataatatatgcaaagtcaggagttcg-aacccgaccaccac 59  Q
    |||||| | |||||||||||||||||||| || ||| |||||||| ||||||||||||||    
T  7827520 cagttgatatggacaatgcataatatatgtaaggtctggagttcgaaacccgaccaccac 7827579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 9321454 - 9321423
Alignment:
Q  1 cagttggtttggacaatgcataatatatgcaa 32  Q
    ||||||||||||||||||||||||||||||||    
T  9321454 cagttggtttggacaatgcataatatatgcaa 9321423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 24428522 - 24428487
Alignment:
Q  1 cagttggtttggacaatgcataatatatgcaaagtc 36  Q
    |||||||| |||||||||||||||||||||||||||    
T  24428522 cagttggtatggacaatgcataatatatgcaaagtc 24428487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 53996311 - 53996370
Alignment:
Q  1 cagttggtttggacaatgcataatatatgcaaagtcaggagttcgaa-cccgaccaccac 59  Q
    |||||||| ||||||||||||||||||||||| ||| || ||||||| |||| |||||||    
T  53996311 cagttggtatggacaatgcataatatatgcaaggtctggggttcgaatcccggccaccac 53996370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 50
Target Start/End: Complemental strand, 46226063 - 46226025
Alignment:
Q  12 gacaatgcataatatatgcaaagtcaggagttcgaaccc 50  Q
    ||||||||||||||||||||| ||| |||||||||||||    
T  46226063 gacaatgcataatatatgcaaggtccggagttcgaaccc 46226025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 4601856 - 4601905
Alignment:
Q  1 cagttggtttggacaatgcataatatatgcaaagtcaggagttcgaaccc 50  Q
    ||||||||||||||||||||||||| |||||| ||| || |||| |||||    
T  4601856 cagttggtttggacaatgcataataaatgcaaggtccggggttcaaaccc 4601905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 12 - 60
Target Start/End: Original strand, 7824830 - 7824879
Alignment:
Q  12 gacaatgcataatatatgcaaagtcaggagttcg-aacccgaccaccacc 60  Q
    |||||| |||||||||||||| ||| |||||||| |||||||||||||||    
T  7824830 gacaatacataatatatgcaaggtctggagttcgaaacccgaccaccacc 7824879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 13 - 50
Target Start/End: Complemental strand, 14160315 - 14160278
Alignment:
Q  13 acaatgcataatatatgcaaagtcaggagttcgaaccc 50  Q
    |||||||||||||||||||||||| || ||||||||||    
T  14160315 acaatgcataatatatgcaaagtccggggttcgaaccc 14160278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 25441549 - 25441500
Alignment:
Q  1 cagttggtttggacaatgcataatatatgcaaagtcaggagttcgaaccc 50  Q
    |||||||| ||||||||||||||||||||||| ||| || |||| |||||    
T  25441549 cagttggtatggacaatgcataatatatgcaaggtctggggttcaaaccc 25441500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 11 - 60
Target Start/End: Complemental strand, 25505740 - 25505691
Alignment:
Q  11 ggacaatgcataatatatgcaaagtcaggagttcgaacccgaccaccacc 60  Q
    |||||||||||||||||||||| ||| || |||||||||||  |||||||    
T  25505740 ggacaatgcataatatatgcaaggtctggggttcgaacccggacaccacc 25505691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 32843311 - 32843262
Alignment:
Q  1 cagttggtttggacaatgcataatatatgcaaagtcaggagttcgaaccc 50  Q
    ||||||||||||||||||||||| |||||||| ||| || |||| |||||    
T  32843311 cagttggtttggacaatgcataaaatatgcaaggtctggggttcaaaccc 32843262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 35191866 - 35191817
Alignment:
Q  1 cagttggtttggacaatgcataatatatgcaaagtcaggagttcgaaccc 50  Q
    ||||||||  |||||||||||||||||||||| ||| || ||||||||||    
T  35191866 cagttggtaaggacaatgcataatatatgcaaggtctggggttcgaaccc 35191817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 38131008 - 38130959
Alignment:
Q  1 cagttggtttggacaatgcataatatatgcaaagtcaggagttcgaaccc 50  Q
    |||||||| ||||||||||||||||||||||| ||| || |||| |||||    
T  38131008 cagttggtatggacaatgcataatatatgcaaggtccggggttcaaaccc 38130959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 44579648 - 44579697
Alignment:
Q  1 cagttggtttggacaatgcataatatatgcaaagtcaggagttcgaaccc 50  Q
    |||||||| |||||||||||||| |||||||| ||| || ||||||||||    
T  44579648 cagttggtatggacaatgcataaaatatgcaaggtccggggttcgaaccc 44579697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 11 - 59
Target Start/End: Original strand, 47039449 - 47039498
Alignment:
Q  11 ggacaatgcataatatatgcaaagtcaggagttcgaa-cccgaccaccac 59  Q
    |||||||||||||||||||||||||  || ||||||| ||||||||||||    
T  47039449 ggacaatgcataatatatgcaaagttcggggttcgaatcccgaccaccac 47039498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 14741806 - 14741854
Alignment:
Q  1 cagttggtttggacaatgcataatatatgcaaagtcaggagttcgaacc 49  Q
    ||||||||  |||||||||||||||||||||| ||  ||||||||||||    
T  14741806 cagttggtaaggacaatgcataatatatgcaaggtttggagttcgaacc 14741854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 52575959 - 52576019
Alignment:
Q  1 cagttggtttggacaatgcataatatatgcaaagtcaggagttcgaa-cccgaccaccacc 60  Q
    |||||||| || ||||||||||| |||||||| ||| || ||||||| |||||||||||||    
T  52575959 cagttggtatgaacaatgcataaaatatgcaaggtctggggttcgaatcccgaccaccacc 52576019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 38; Significance: 0.000000000001; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 38763564 - 38763515
Alignment:
Q  1 cagttggtttggacaatgcataatatatgcaaagtcaggagttcgaaccc 50  Q
    |||||||||||||||||||||||||||||||| ||| || ||||||||||    
T  38763564 cagttggtttggacaatgcataatatatgcaaggtctggggttcgaaccc 38763515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 32051581 - 32051532
Alignment:
Q  1 cagttggtttggacaatgcataatatatgcaaagtcaggagttcgaaccc 50  Q
    |||||||||||||||||||||||||||||||| ||| || |||| |||||    
T  32051581 cagttggtttggacaatgcataatatatgcaaggtccggggttcaaaccc 32051532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 6447201 - 6447244
Alignment:
Q  1 cagttggtttggacaatgcataatatatgcaaagtcaggagttc 44  Q
    |||||||| ||||||||||||||||||||||| ||| |||||||    
T  6447201 cagttggtatggacaatgcataatatatgcaaggtccggagttc 6447244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 29376913 - 29376972
Alignment:
Q  1 cagttggtttggacaatgcataatatatgcaaagtcaggagttcgaa-cccgaccaccac 59  Q
    |||||||| |||||||||| |||||||||||| ||| ||||||| || ||||||||||||    
T  29376913 cagttggtatggacaatgcgtaatatatgcaaggtctggagttcaaaccccgaccaccac 29376972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 43240346 - 43240377
Alignment:
Q  1 cagttggtttggacaatgcataatatatgcaa 32  Q
    ||||||||||||||||||||||||||||||||    
T  43240346 cagttggtttggacaatgcataatatatgcaa 43240377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 27718943 - 27718885
Alignment:
Q  1 cagttggtttggacaatgcataatatatgcaaagtcaggagttcgaac-ccgaccacca 58  Q
    |||||| | ||||||||||||||||||||||| ||| ||||||| ||| ||||||||||    
T  27718943 cagttgatatggacaatgcataatatatgcaaggtccggagttcaaactccgaccacca 27718885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 48
Target Start/End: Original strand, 44602618 - 44602656
Alignment:
Q  10 tggacaatgcataatatatgcaaagtcaggagttcgaac 48  Q
    ||||||||||||||||||||||| ||| |||||||||||    
T  44602618 tggacaatgcataatatatgcaaggtccggagttcgaac 44602656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 7433152 - 7433201
Alignment:
Q  1 cagttggtttggacaatgcataatatatgcaaagtcaggagttcgaaccc 50  Q
    ||||||||||||||||||||||||||||| || ||| ||  |||||||||    
T  7433152 cagttggtttggacaatgcataatatatgtaaggtctgggattcgaaccc 7433201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 8461885 - 8461836
Alignment:
Q  1 cagttggtttggacaatgcataatatatgcaaagtcaggagttcgaaccc 50  Q
    ||||||||| ||||||||||||| |||||||| ||| ||||||| |||||    
T  8461885 cagttggttgggacaatgcataaaatatgcaaggtccggagttcaaaccc 8461836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 12748913 - 12748962
Alignment:
Q  1 cagttggtttggacaatgcataatatatgcaaagtcaggagttcgaaccc 50  Q
    |||||||| ||||||||||||||||||||||| ||| || |||| |||||    
T  12748913 cagttggtatggacaatgcataatatatgcaaggtccggggttcaaaccc 12748962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 30623305 - 30623354
Alignment:
Q  1 cagttggtttggacaatgcataatatatgcaaagtcaggagttcgaaccc 50  Q
    ||||||||  |||||||||||||||||||||| ||| || ||||||||||    
T  30623305 cagttggtaaggacaatgcataatatatgcaaggtctggggttcgaaccc 30623354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 12 - 49
Target Start/End: Complemental strand, 32223917 - 32223880
Alignment:
Q  12 gacaatgcataatatatgcaaagtcaggagttcgaacc 49  Q
    ||||||||||||||||||||||||| ||||||| ||||    
T  32223917 gacaatgcataatatatgcaaagtctggagttcaaacc 32223880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 13 - 50
Target Start/End: Original strand, 42367753 - 42367790
Alignment:
Q  13 acaatgcataatatatgcaaagtcaggagttcgaaccc 50  Q
    ||||||||||||||||| |||||| |||||||||||||    
T  42367753 acaatgcataatatatgaaaagtccggagttcgaaccc 42367790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 4830020 - 4830076
Alignment:
Q  1 cagttggtttggacaatgcataatatatgcaaagtcaggagttcgaa-cccgaccac 56  Q
    |||||||| ||||||||||||||||||||||| ||  || ||||||| |||||||||    
T  4830020 cagttggtatggacaatgcataatatatgcaaggttcggggttcgaatcccgaccac 4830076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 12800949 - 12800889
Alignment:
Q  1 cagttggtttggacaatgcataatatatgcaaagtcaggagttcgaa-cccgaccaccacc 60  Q
    |||||||| |||||||| |||||||||||||| ||| || |||| || |||||||||||||    
T  12800949 cagttggtatggacaatacataatatatgcaaggtccggggttcaaaccccgaccaccacc 12800889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 22775641 - 22775689
Alignment:
Q  2 agttggtttggacaatgcataatatatgcaaagtcaggagttcgaaccc 50  Q
    ||||||||||||||||||||||| ||||||| ||| || |||| |||||    
T  22775641 agttggtttggacaatgcataatttatgcaaggtccggggttcaaaccc 22775689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 32192907 - 32192955
Alignment:
Q  2 agttggtttggacaatgcataatatatgcaaagtcaggagttcgaaccc 50  Q
    ||||||| ||||||||||||||||||||||| ||  || ||||||||||    
T  32192907 agttggtatggacaatgcataatatatgcaaggttcggggttcgaaccc 32192955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 37; Significance: 0.000000000004; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 47342483 - 47342427
Alignment:
Q  1 cagttggtttggacaatgcataatatatgcaaagtcaggagttcgaac-ccgaccac 56  Q
    |||||||||||||||||||||||||||||||| ||| ||||||| ||| ||||||||    
T  47342483 cagttggtttggacaatgcataatatatgcaaggtccggagttcaaactccgaccac 47342427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 50
Target Start/End: Original strand, 34809367 - 34809406
Alignment:
Q  11 ggacaatgcataatatatgcaaagtcaggagttcgaaccc 50  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  34809367 ggacaatgcataatatatgtaaagtcaggagttcgaaccc 34809406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 10244739 - 10244797
Alignment:
Q  1 cagttggtttggacaatgcataatatatgcaaagtcaggagttcgaacccgaccaccac 59  Q
    |||||||| ||||||||||||||||||||||| ||| || |||| |||||| |||||||    
T  10244739 cagttggtatggacaatgcataatatatgcaaggtccggggttcaaacccggccaccac 10244797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 27263353 - 27263402
Alignment:
Q  1 cagttggtttggacaatgcataatatatgcaaagtcaggagttcgaaccc 50  Q
    |||||||| ||||||||||||||||||||||| ||  |||||||||||||    
T  27263353 cagttggtatggacaatgcataatatatgcaaggttcggagttcgaaccc 27263402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 27270247 - 27270295
Alignment:
Q  1 cagttggtttggacaatgcataatatatgcaaagtcaggagttcgaacc 49  Q
    |||||||| ||||||||||||||||||||||| ||  ||||||||||||    
T  27270247 cagttggtatggacaatgcataatatatgcaaggttcggagttcgaacc 27270295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 19626574 - 19626543
Alignment:
Q  1 cagttggtttggacaatgcataatatatgcaa 32  Q
    ||||||||||||||||||||||||||||||||    
T  19626574 cagttggtttggacaatgcataatatatgcaa 19626543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 23413095 - 23413052
Alignment:
Q  1 cagttggtttggacaatgcataatatatgcaaagtcaggagttc 44  Q
    |||||||| ||||||||||||||||||||||| ||| |||||||    
T  23413095 cagttggtatggacaatgcataatatatgcaaggtcgggagttc 23413052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 37624555 - 37624614
Alignment:
Q  1 cagttggtttggacaatgcataatatatgcaaagtcaggagttcgaa-cccgaccaccac 59  Q
    |||||||| ||||||||||||||||||||||| ||| || ||||||| |||| |||||||    
T  37624555 cagttggtatggacaatgcataatatatgcaaggtcgggggttcgaatcccggccaccac 37624614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 7872797 - 7872748
Alignment:
Q  1 cagttggtttggacaatgcataatatatgcaaagtcaggagttcgaaccc 50  Q
    ||||||||  |||||||||||||||||||||| ||| || ||||||||||    
T  7872797 cagttggtaaggacaatgcataatatatgcaaggtctggggttcgaaccc 7872748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 13 - 50
Target Start/End: Original strand, 9139477 - 9139514
Alignment:
Q  13 acaatgcataatatatgcaaagtcaggagttcgaaccc 50  Q
    ||||||||||||||||| |||||| |||||||||||||    
T  9139477 acaatgcataatatatgtaaagtctggagttcgaaccc 9139514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 19599157 - 19599206
Alignment:
Q  1 cagttggtttggacaatgcataatatatgcaaagtcaggagttcgaaccc 50  Q
    |||||||| ||||||||||||||||||||||| ||| || |||| |||||    
T  19599157 cagttggtatggacaatgcataatatatgcaaggtccggggttcaaaccc 19599206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 27462485 - 27462436
Alignment:
Q  1 cagttggtttggacaatgcataatatatgcaaagtcaggagttcgaaccc 50  Q
    |||||||| ||||||||||||||||||||||| ||| || |||| |||||    
T  27462485 cagttggtatggacaatgcataatatatgcaaggtccggggttcaaaccc 27462436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 11 - 48
Target Start/End: Complemental strand, 33610964 - 33610927
Alignment:
Q  11 ggacaatgcataatatatgcaaagtcaggagttcgaac 48  Q
    |||||||||||||||||||||| ||| |||||||||||    
T  33610964 ggacaatgcataatatatgcaaggtccggagttcgaac 33610927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 40808208 - 40808151
Alignment:
Q  1 cagttggtttggacaatgcataatatatgcaaagtcaggagttcgaacccgaccacca 58  Q
    ||||||||||||||| ||||||| |||||||| ||| || |||| |||||| ||||||    
T  40808208 cagttggtttggacagtgcataaaatatgcaaggtccggggttcaaacccgcccacca 40808151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 46987098 - 46987147
Alignment:
Q  1 cagttggtttggacaatgcataatatatgcaaagtcaggagttcgaaccc 50  Q
    ||||||||  |||||||||||||||||||||| ||| || ||||||||||    
T  46987098 cagttggtaaggacaatgcataatatatgcaaggtccggggttcgaaccc 46987147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 11 - 59
Target Start/End: Original strand, 48527212 - 48527261
Alignment:
Q  11 ggacaatgcataatatatgcaaagtcaggagttcgaa-cccgaccaccac 59  Q
    |||||||||||||||||||||| ||| |||||||||| |||| |||||||    
T  48527212 ggacaatgcataatatatgcaaggtccggagttcgaatcccggccaccac 48527261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 60
Target Start/End: Original strand, 3671848 - 3671896
Alignment:
Q  13 acaatgcataatatatgcaaagtcaggagttcgaa-cccgaccaccacc 60  Q
    |||||||||||||||||||| ||| ||||||| || |||||||||||||    
T  3671848 acaatgcataatatatgcaaggtctggagttcaaaccccgaccaccacc 3671896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 7670446 - 7670494
Alignment:
Q  1 cagttggtttggacaatgcataatatatgcaaagtcaggagttcgaacc 49  Q
    ||||||||||| |||||||||||||||||||| ||| || |||| ||||    
T  7670446 cagttggtttgaacaatgcataatatatgcaaggtccggggttcaaacc 7670494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 10026006 - 10026066
Alignment:
Q  1 cagttggtttggacaatgcataatatatgcaaagtcaggagttcgaa-cccgaccaccacc 60  Q
    ||||||||||||||||||||||| |||||||| ||  || |||| || |||||||||||||    
T  10026006 cagttggtttggacaatgcataaaatatgcaaggtatggggttcaaaccccgaccaccacc 10026066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 34448659 - 34448631
Alignment:
Q  1 cagttggtttggacaatgcataatatatg 29  Q
    |||||||||||||||||||||||||||||    
T  34448659 cagttggtttggacaatgcataatatatg 34448631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 35142198 - 35142138
Alignment:
Q  1 cagttggtttggacaatgcataatatatgcaaagtcaggagttcgaa-cccgaccaccacc 60  Q
    |||||| | ||||||||||||||||||||||||||  |  ||||||| |||||||||||||    
T  35142198 cagttgatatggacaatgcataatatatgcaaagtttgaggttcgaaccccgaccaccacc 35142138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 45200205 - 45200253
Alignment:
Q  1 cagttggtttggacaatgcataatatatgcaaagtcaggagttcgaacc 49  Q
    |||||| | |||||||||||||||| ||||||| || ||||||||||||    
T  45200205 cagttgatatggacaatgcataatacatgcaaaatctggagttcgaacc 45200253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 36; Significance: 0.00000000002; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 3358403 - 3358438
Alignment:
Q  1 cagttggtttggacaatgcataatatatgcaaagtc 36  Q
    ||||||||||||||||||||||||||||||||||||    
T  3358403 cagttggtttggacaatgcataatatatgcaaagtc 3358438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 2726466 - 2726417
Alignment:
Q  1 cagttggtttggacaatgcataatatatgcaaagtcaggagttcgaaccc 50  Q
    |||||||| ||||||||||||||||||||||| ||| || ||||||||||    
T  2726466 cagttggtatggacaatgcataatatatgcaaggtccggggttcgaaccc 2726417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 655798 - 655749
Alignment:
Q  1 cagttggtttggacaatgcataatatatgcaaagtcaggagttcgaaccc 50  Q
    |||||||| | ||||||||||||||||||||| ||| || ||||||||||    
T  655798 cagttggtatcgacaatgcataatatatgcaaggtccggggttcgaaccc 655749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 9111059 - 9111108
Alignment:
Q  1 cagttggtttggacaatgcataatatatgcaaagtcaggagttcgaaccc 50  Q
    |||||||| || |||||||||||||||||||| ||| || ||||||||||    
T  9111059 cagttggtatgaacaatgcataatatatgcaaggtccggggttcgaaccc 9111108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 20744150 - 20744199
Alignment:
Q  1 cagttggtttggacaatgcataatatatgcaaagtcaggagttcgaaccc 50  Q
    |||||||| ||||||||||||||||||||||| ||| || |||| |||||    
T  20744150 cagttggtatggacaatgcataatatatgcaaggtctggggttcaaaccc 20744199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 9677247 - 9677275
Alignment:
Q  1 cagttggtttggacaatgcataatatatg 29  Q
    |||||||||||||||||||||||||||||    
T  9677247 cagttggtttggacaatgcataatatatg 9677275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 36; Significance: 0.00000000002; HSPs: 16)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 20688052 - 20688095
Alignment:
Q  1 cagttggtttggacaatgcataatatatgcaaagtcaggagttc 44  Q
    |||||||||||||||||||||||||||||||| ||| |||||||    
T  20688052 cagttggtttggacaatgcataatatatgcaaggtccggagttc 20688095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 59
Target Start/End: Complemental strand, 8545028 - 8544979
Alignment:
Q  11 ggacaatgcataatatatgcaaagtcaggagttcgaac-ccgaccaccac 59  Q
    |||||||||||||||||||||| ||| ||||||||||| |||||||||||    
T  8545028 ggacaatgcataatatatgcaaggtccggagttcgaactccgaccaccac 8544979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 37932342 - 37932391
Alignment:
Q  1 cagttggtttggacaatgcataatatatgcaaagtcaggagttcgaaccc 50  Q
    |||||||| ||||||||||||||||||||||| ||| || ||||||||||    
T  37932342 cagttggtatggacaatgcataatatatgcaaggtccggggttcgaaccc 37932391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 33645738 - 33645681
Alignment:
Q  1 cagttggtttggacaatgcataatatatgcaaagtcaggagttcgaacccgaccaccac 59  Q
    |||||||| ||||||||| ||||||||||||| ||| || |||||||||| ||||||||    
T  33645738 cagttggtatggacaatgtataatatatgcaaggtc-ggggttcgaacccaaccaccac 33645681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 5846041 - 5846090
Alignment:
Q  1 cagttggtttggacaatgcataatatatgcaaagtcaggagttcgaaccc 50  Q
    ||||||||  |||||||||||||||||||||||||| || |||| |||||    
T  5846041 cagttggtaaggacaatgcataatatatgcaaagtctggggttcaaaccc 5846090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 6624788 - 6624837
Alignment:
Q  1 cagttggtttggacaatgcataatatatgcaaagtcaggagttcgaaccc 50  Q
    |||||||  ||||||||||||||||||||||| ||| || ||||||||||    
T  6624788 cagttggcatggacaatgcataatatatgcaaggtccggggttcgaaccc 6624837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 18489125 - 18489076
Alignment:
Q  1 cagttggtttggacaatgcataatatatgcaaagtcaggagttcgaaccc 50  Q
    |||||||| | ||||||||||||||||||||| ||| |||||| ||||||    
T  18489125 cagttggtatagacaatgcataatatatgcaaggtctggagtttgaaccc 18489076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 24408507 - 24408556
Alignment:
Q  1 cagttggtttggacaatgcataatatatgcaaagtcaggagttcgaaccc 50  Q
    |||||||||||||| ||||||||||||||||| ||| || |||| |||||    
T  24408507 cagttggtttggacgatgcataatatatgcaaggtctggggttcaaaccc 24408556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 26409265 - 26409314
Alignment:
Q  1 cagttggtttggacaatgcataatatatgcaaagtcaggagttcgaaccc 50  Q
    |||||||| |||||||||||||||||||| || ||| || ||||||||||    
T  26409265 cagttggtatggacaatgcataatatatgtaaggtccggggttcgaaccc 26409314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 26655476 - 26655525
Alignment:
Q  1 cagttggtttggacaatgcataatatatgcaaagtcaggagttcgaaccc 50  Q
    |||||||| |||||||||||||||||||| || ||| || ||||||||||    
T  26655476 cagttggtatggacaatgcataatatatgtaaggtccggggttcgaaccc 26655525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 26927061 - 26927110
Alignment:
Q  1 cagttggtttggacaatgcataatatatgcaaagtcaggagttcgaaccc 50  Q
    |||||||| |||||||||||||||||||| || ||| || ||||||||||    
T  26927061 cagttggtatggacaatgcataatatatgtaaggtccggggttcgaaccc 26927110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 59
Target Start/End: Original strand, 7713558 - 7713602
Alignment:
Q  15 aatgcataatatatgcaaagtcaggagttcgaacccgaccaccac 59  Q
    |||||||||||||||||| ||  ||||||| ||||||||||||||    
T  7713558 aatgcataatatatgcaaggtttggagttcaaacccgaccaccac 7713602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 59
Target Start/End: Complemental strand, 12611081 - 12611025
Alignment:
Q  4 ttggtttggacaatgcataatatatgcaaagtcaggagttcgaacc-cgaccaccac 59  Q
    ||||| |||||||||||||| |||||||| ||| || ||||||||| ||||||||||    
T  12611081 ttggtatggacaatgcataaaatatgcaaggtctggggttcgaacctcgaccaccac 12611025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 17239430 - 17239382
Alignment:
Q  1 cagttggtttggacaatgcataatatatgcaaagtcaggagttcgaacc 49  Q
    |||||||| |||||||||||||||||||| || | | ||||||||||||    
T  17239430 cagttggtatggacaatgcataatatatgtaagggccggagttcgaacc 17239382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 31708195 - 31708147
Alignment:
Q  1 cagttggtttggacaatgcataatatatgcaaagtcaggagttcgaacc 49  Q
    |||||||| || |||||||||||||||||||| ||| || |||||||||    
T  31708195 cagttggtatgaacaatgcataatatatgcaaggtctggggttcgaacc 31708147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 32283591 - 32283651
Alignment:
Q  1 cagttggtttggacaatgcataat-atatgcaaagtcaggagttcgaacccgaccaccacc 60  Q
    |||||||| ||||||||||||||| ||||| || ||| | |||||||| ||||||||||||    
T  32283591 cagttggtatggacaatgcataataatatgtaaggtctgaagttcgaatccgaccaccacc 32283651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 36; Significance: 0.00000000002; HSPs: 25)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 8020696 - 8020638
Alignment:
Q  1 cagttggtttggacaatgcataatatatgcaaagtcaggagttcgaacccgaccaccacc 60  Q
    |||||||||||||||||||||||||||||||| ||| |  ||||||||||| ||||||||    
T  8020696 cagttggtttggacaatgcataatatatgcaaggtc-gaggttcgaacccggccaccacc 8020638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 675930 - 675979
Alignment:
Q  1 cagttggtttggacaatgcataatatatgcaaagtcaggagttcgaaccc 50  Q
    |||||||||||||||||||||||||||||||| ||| || |||| |||||    
T  675930 cagttggtttggacaatgcataatatatgcaaggtccggggttcaaaccc 675979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 2649782 - 2649733
Alignment:
Q  1 cagttggtttggacaatgcataatatatgcaaagtcaggagttcgaaccc 50  Q
    ||||||||  |||||||||||||||||||||| ||| |||||||||||||    
T  2649782 cagttggtagggacaatgcataatatatgcaaggtccggagttcgaaccc 2649733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 14577556 - 14577507
Alignment:
Q  1 cagttggtttggacaatgcataatatatgcaaagtcaggagttcgaaccc 50  Q
    ||||||||  |||||||||||||||||||||||||| ||||||| |||||    
T  14577556 cagttggtaaggacaatgcataatatatgcaaagtccggagttcaaaccc 14577507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 52132351 - 52132302
Alignment:
Q  1 cagttggtttggacaatgcataatatatgcaaagtcaggagttcgaaccc 50  Q
    |||||||||||||||||||||||||||||||| ||| |  ||||||||||    
T  52132351 cagttggtttggacaatgcataatatatgcaaggtctgtggttcgaaccc 52132302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 21991295 - 21991247
Alignment:
Q  2 agttggtttggacaatgcataatatatgcaaagtcaggagttcgaaccc 50  Q
    ||||||| |||||||||||||| |||||||| ||| |||||||||||||    
T  21991295 agttggtatggacaatgcataaaatatgcaaggtccggagttcgaaccc 21991247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 11949812 - 11949753
Alignment:
Q  1 cagttggtttggacaatgcataatatatgcaaagtcaggagttcgaa-cccgaccaccac 59  Q
    |||||||| ||||||||||||||||||||||| ||| || |||| || ||||||||||||    
T  11949812 cagttggtatggacaatgcataatatatgcaaggtccggggttcaaaccccgaccaccac 11949753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 24665040 - 24664981
Alignment:
Q  1 cagttggtttggacaatgcataatatatgcaaagtcaggagttcgaa-cccgaccaccac 59  Q
    |||||||| |||| |||||||||||||||||| ||| || ||||||| ||||||||||||    
T  24665040 cagttggtatggagaatgcataatatatgcaaggtccggggttcgaaccccgaccaccac 24664981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 32180842 - 32180901
Alignment:
Q  1 cagttggtttggacaatgcataatatatgcaaagtcaggagttcgaa-cccgaccaccac 59  Q
    |||||||| | |||||||||||| |||||||||||| || ||||||| ||||||||||||    
T  32180842 cagttggtatagacaatgcataaaatatgcaaagtctggggttcgaaccccgaccaccac 32180901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 55421618 - 55421587
Alignment:
Q  1 cagttggtttggacaatgcataatatatgcaa 32  Q
    ||||||||||||||||||||||||||||||||    
T  55421618 cagttggtttggacaatgcataatatatgcaa 55421587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 12698609 - 12698655
Alignment:
Q  1 cagttggtttggacaatgcataatatatgcaaagtcaggagttcgaa 47  Q
    |||||| ||||||||||||||||||||||||| ||| || |||||||    
T  12698609 cagttgatttggacaatgcataatatatgcaaggtctggggttcgaa 12698655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 3936639 - 3936688
Alignment:
Q  1 cagttggtttggacaatgcataatatatgcaaagtcaggagttcgaaccc 50  Q
    |||||||| || |||||||||||||||||||| ||| || ||||||||||    
T  3936639 cagttggtatgaacaatgcataatatatgcaaggtccggggttcgaaccc 3936688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 20383500 - 20383549
Alignment:
Q  1 cagttggtttggacaatgcataatatatgcaaagtcaggagttcgaaccc 50  Q
    |||||||| ||||||||||||||||||||||| ||| || |||| |||||    
T  20383500 cagttggtatggacaatgcataatatatgcaaggtccggggttcaaaccc 20383549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 44221459 - 44221508
Alignment:
Q  1 cagttggtttggacaatgcataatatatgcaaagtcaggagttcgaaccc 50  Q
    |||||||| ||||||||||||||||||||||| ||| |  ||||||||||    
T  44221459 cagttggtatggacaatgcataatatatgcaaggtctgaggttcgaaccc 44221508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 49473657 - 49473706
Alignment:
Q  1 cagttggtttggacaatgcataatatatgcaaagtcaggagttcgaaccc 50  Q
    ||||||||  |||||||||||||||||||||| ||| || ||||||||||    
T  49473657 cagttggtaaggacaatgcataatatatgcaaggtccggggttcgaaccc 49473706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 6459973 - 6459925
Alignment:
Q  1 cagttggtttggacaatgcataatatatgcaaagtcaggagttcgaacc 49  Q
    |||||| | |||||||||||||||||||| || ||| ||||||||||||    
T  6459973 cagttgatatggacaatgcataatatatgtaaggtccggagttcgaacc 6459925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 9946439 - 9946499
Alignment:
Q  1 cagttggtttggacaatgcataatatatgcaaagtcaggagttcgaa-cccgaccaccacc 60  Q
    |||||||| |||||||||||||| |||||||| ||| || |||| || |||||||||||||    
T  9946439 cagttggtatggacaatgcataaaatatgcaaggtccggggttcaaaccccgaccaccacc 9946499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 19854577 - 19854625
Alignment:
Q  1 cagttggtttggacaatgcataatatatgcaaagtcaggagttcgaacc 49  Q
    |||||||| |||||||||||||||||||||||  || || |||||||||    
T  19854577 cagttggtatggacaatgcataatatatgcaagatccggggttcgaacc 19854625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 29681506 - 29681446
Alignment:
Q  1 cagttggtttggacaatgcataatatatgcaaagtcaggagttcgaacc-cgaccaccacc 60  Q
    |||||||| |||||||||||||| |||||||| ||| |  ||||||||| |||||||||||    
T  29681506 cagttggtatggacaatgcataaaatatgcaatgtctgaggttcgaacctcgaccaccacc 29681446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 29908068 - 29908116
Alignment:
Q  1 cagttggtttggacaatgcataatatatgcaaagtcaggagttcgaacc 49  Q
    ||||||||  |||||||||||||||||||||| ||| ||||||| ||||    
T  29908068 cagttggtaaggacaatgcataatatatgcaaggtccggagttcaaacc 29908116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 39
Target Start/End: Complemental strand, 36489427 - 36489399
Alignment:
Q  11 ggacaatgcataatatatgcaaagtcagg 39  Q
    |||||||||||||||||||||||||||||    
T  36489427 ggacaatgcataatatatgcaaagtcagg 36489399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 38374970 - 38375018
Alignment:
Q  2 agttggtttggacaatgcataatatatgcaaagtcaggagttcgaaccc 50  Q
    |||||||  |||||||||||||||||||||| ||| ||||||| |||||    
T  38374970 agttggtagggacaatgcataatatatgcaaggtctggagttcaaaccc 38375018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 47806304 - 47806256
Alignment:
Q  2 agttggtttggacaatgcataatatatgcaaagtcaggagttcgaaccc 50  Q
    |||||||  |||||||||||||||||||||| ||| || ||||||||||    
T  47806304 agttggtgaggacaatgcataatatatgcaaggtctggggttcgaaccc 47806256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 48955304 - 48955352
Alignment:
Q  1 cagttggtttggacaatgcataatatatgcaaagtcaggagttcgaacc 49  Q
    ||||||||  ||||||||| |||||||||||||||| || |||||||||    
T  48955304 cagttggtaaggacaatgcgtaatatatgcaaagtccggggttcgaacc 48955352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 51
Target Start/End: Original strand, 49308842 - 49308882
Alignment:
Q  11 ggacaatgcataatatatgcaaagtcaggagttcgaacccg 51  Q
    |||||||||||||||||||||| ||| || |||||||||||    
T  49308842 ggacaatgcataatatatgcaaggtctggggttcgaacccg 49308882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 36; Significance: 0.00000000002; HSPs: 20)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 60
Target Start/End: Original strand, 32944749 - 32944808
Alignment:
Q  2 agttggtttggacaatgcataatatatgcaaagtcaggagttcgaa-cccgaccaccacc 60  Q
    ||||||| ||||||||||||||||||||||| ||| || ||||||| |||||||||||||    
T  32944749 agttggtatggacaatgcataatatatgcaacgtctggggttcgaaccccgaccaccacc 32944808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 13590122 - 13590179
Alignment:
Q  1 cagttggtttggacaatgcataatatatgcaaagtcaggagttcgaacccgaccacca 58  Q
    ||||||||||||||||||||||| ||||| || ||  ||||||| |||||||||||||    
T  13590122 cagttggtttggacaatgcataaaatatgtaaggttcggagttcaaacccgaccacca 13590179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 26803500 - 26803451
Alignment:
Q  1 cagttggtttggacaatgcataatatatgcaaagtcaggagttcgaaccc 50  Q
    |||||||| ||||||||||||||||||||||||||| || |||| |||||    
T  26803500 cagttggtatggacaatgcataatatatgcaaagtccggggttcaaaccc 26803451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 42045421 - 42045372
Alignment:
Q  1 cagttggtttggacaatgcataatatatgcaaagtcaggagttcgaaccc 50  Q
    |||||||| ||||||||||||||||||||||| ||| ||||||| |||||    
T  42045421 cagttggtatggacaatgcataatatatgcaaggtctggagttcaaaccc 42045372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 11 - 50
Target Start/End: Complemental strand, 29987151 - 29987112
Alignment:
Q  11 ggacaatgcataatatatgcaaagtcaggagttcgaaccc 50  Q
    |||||||||||||||||||||| ||| |||||||||||||    
T  29987151 ggacaatgcataatatatgcaaggtctggagttcgaaccc 29987112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 49
Target Start/End: Complemental strand, 64717 - 64679
Alignment:
Q  11 ggacaatgcataatatatgcaaagtcaggagttcgaacc 49  Q
    |||||||||||||||||||||||||| ||||||| ||||    
T  64717 ggacaatgcataatatatgcaaagtccggagttcaaacc 64679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 5279419 - 5279361
Alignment:
Q  1 cagttggtttggacaatgcataatatatgcaaagtcaggagttcgaacc-cgaccacca 58  Q
    |||| ||| ||||||||||||||||||||||| ||| ||||||| |||| |||||||||    
T  5279419 cagtcggtatggacaatgcataatatatgcaatgtctggagttcaaacctcgaccacca 5279361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 49
Target Start/End: Complemental strand, 9639856 - 9639818
Alignment:
Q  11 ggacaatgcataatatatgcaaagtcaggagttcgaacc 49  Q
    |||||||||||||||||||||| ||| ||||||||||||    
T  9639856 ggacaatgcataatatatgcaaggtccggagttcgaacc 9639818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 15 - 60
Target Start/End: Complemental strand, 10356749 - 10356704
Alignment:
Q  15 aatgcataatatatgcaaagtcaggagttcgaacccgaccaccacc 60  Q
    |||||||||||||||||| ||| || |||| |||||||||||||||    
T  10356749 aatgcataatatatgcaaggtctggggttcaaacccgaccaccacc 10356704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 14520956 - 14521005
Alignment:
Q  1 cagttggtttggacaatgcataatatatgcaaagtcaggagttcgaaccc 50  Q
    |||||||| |||||||||||||| |||||||||||  || ||||||||||    
T  14520956 cagttggtatggacaatgcataaaatatgcaaagtttggggttcgaaccc 14521005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 18166614 - 18166663
Alignment:
Q  1 cagttggtttggacaatgcataatatatgcaaagtcaggagttcgaaccc 50  Q
    |||||||| | ||||||||||||||||||||||||| || |||| |||||    
T  18166614 cagttggtatagacaatgcataatatatgcaaagtccggggttcaaaccc 18166663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 25532985 - 25533034
Alignment:
Q  1 cagttggtttggacaatgcataatatatgcaaagtcaggagttcgaaccc 50  Q
    |||||||| ||||||||||||||||||||||| ||| || |||| |||||    
T  25532985 cagttggtatggacaatgcataatatatgcaaggtccggggttcaaaccc 25533034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 59
Target Start/End: Complemental strand, 40661802 - 40661746
Alignment:
Q  2 agttggtttggacaatgcataatatatgcaaagtcaggagttcgaacccgaccaccac 59  Q
    ||||||| ||||||| ||||||||||||||| ||| || ||||||||||| |||||||    
T  40661802 agttggtatggacaaagcataatatatgcaaggtc-ggggttcgaacccggccaccac 40661746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 42888587 - 42888636
Alignment:
Q  1 cagttggtttggacaatgcataatatatgcaaagtcaggagttcgaaccc 50  Q
    |||||||| |||||||||||||| |||||||| ||| || ||||||||||    
T  42888587 cagttggtatggacaatgcataaaatatgcaaggtccggggttcgaaccc 42888636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 10132493 - 10132445
Alignment:
Q  1 cagttggtttggacaatgcataatatatgcaaagtcaggagttcgaacc 49  Q
    ||||||||  |||||||||||||||||||||| ||| || |||||||||    
T  10132493 cagttggtaaggacaatgcataatatatgcaaggtctggggttcgaacc 10132445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 60
Target Start/End: Original strand, 29251777 - 29251825
Alignment:
Q  12 gacaatgcataatatatgcaaagtcaggagttcgaacccgaccaccacc 60  Q
    ||||||||||||||||||||| ||| |  ||||||||||| ||||||||    
T  29251777 gacaatgcataatatatgcaaggtctgaggttcgaacccggccaccacc 29251825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 30382508 - 30382556
Alignment:
Q  1 cagttggtttggacaatgcataatatatgcaaagtcaggagttcgaacc 49  Q
    ||||||||||||||||||||||| |||||||| ||| || |||| ||||    
T  30382508 cagttggtttggacaatgcataaaatatgcaaggtctggcgttcaaacc 30382556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 59
Target Start/End: Original strand, 32864315 - 32864363
Alignment:
Q  12 gacaatgcataatatatgcaaagtcaggagttcgaac-ccgaccaccac 59  Q
    ||||||||||||||||||||||||| || |||||| | |||||||||||    
T  32864315 gacaatgcataatatatgcaaagtccggggttcgagctccgaccaccac 32864363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 60
Target Start/End: Complemental strand, 32950798 - 32950750
Alignment:
Q  13 acaatgcataatatatgcaaagtcaggagttcgaacc-cgaccaccacc 60  Q
    |||||||||||||||||||| ||| ||||||| |||| |||||||||||    
T  32950798 acaatgcataatatatgcaaggtccggagttcaaacctcgaccaccacc 32950750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 34521239 - 34521191
Alignment:
Q  1 cagttggtttggacaatgcataatatatgcaaagtcaggagttcgaacc 49  Q
    |||||||| ||||||||||||||||||||||| ||| || |||| ||||    
T  34521239 cagttggtatggacaatgcataatatatgcaaggtccggggttcaaacc 34521191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 239819 - 239868
Alignment:
Q  1 cagttggtttggacaatgcataatatatgcaaagtcaggagttcgaaccc 50  Q
    ||||||||  |||||||||||||||||||||||||| ||||||| |||||    
T  239819 cagttggtaaggacaatgcataatatatgcaaagtccggagttcaaaccc 239868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0735 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0735
Description:

Target: scaffold0735; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 1540 - 1589
Alignment:
Q  1 cagttggtttggacaatgcataatatatgcaaagtcaggagttcgaaccc 50  Q
    |||||||| |||||||||||||| |||||||| ||| || ||||||||||    
T  1540 cagttggtatggacaatgcataaaatatgcaaggtccggggttcgaaccc 1589  T

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Target: scaffold0012 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 118831 - 118888
Alignment:
Q  1 cagttggtttggacaatgcataatatatgcaaagtcaggagttcgaacccgaccacca 58  Q
    ||||||||||| ||||||||||| ||||| || ||| ||||||| |||||| ||||||    
T  118831 cagttggtttgaacaatgcataaaatatgtaaggtctggagttcaaacccggccacca 118888  T

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Target: scaffold0743 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0743
Description:

Target: scaffold0743; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 1468 - 1408
Alignment:
Q  1 cagttggtttggacaatgcataat-atatgcaaagtcaggagttcgaacccgaccaccacc 60  Q
    |||||||| ||||||||||||||| |||||||| ||| || ||||||||||  ||||||||    
T  1468 cagttggtatggacaatgcataataatatgcaacgtctggggttcgaaccccgccaccacc 1408  T

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Target: scaffold0118 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 45424 - 45472
Alignment:
Q  1 cagttggtttggacaatgcataatatatgcaaagtcaggagttcgaacc 49  Q
    ||||||||||||||||| |||||||||||||| ||| || ||| |||||    
T  45424 cagttggtttggacaatacataatatatgcaaggtccggggtttgaacc 45472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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