View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20424_high_18 (Length: 331)
Name: NF20424_high_18
Description: NF20424
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20424_high_18 |
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Alignment Details
Target: chr4 (Bit Score: 256; Significance: 1e-142; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 13 - 312
Target Start/End: Complemental strand, 26847354 - 26847057
Alignment:
| Q |
13 |
aaaattgcatagaaattctagataaaaattgtaaatggataagaaaacaaatgatgggagannnnnnnaacagatttttacagaagtttattaacgagtg |
112 |
Q |
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| T |
26847354 |
aaaattgcatagaaattctagataaaaattgtaaacggataagaaaacaaatgatgggagatttttttaacagatttttacagaagtttattaacgagtg |
26847255 |
T |
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| Q |
113 |
cctctacattgtttgatgaatgaaggactagttgaaggaactttgtatccttcaacagcttttgtatgttgcattttcataaccccatctaaagaatcaa |
212 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26847254 |
cctctacattgtttgatgaatgaaggactagttgaaggaactttgtatccttcaacagcttttgtatgttgcattttcataaccccatctaaagaatcaa |
26847155 |
T |
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| Q |
213 |
tctggggaacattcgaattagcactaagctgagggaatctaacttgagattgtggtacccagtcagacatgtttataacttgaagatcttggttccgttc |
312 |
Q |
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| T |
26847154 |
--ttgggaacattcgaattagcactaagctgagggaatctaacttgagattgtggtacccagtcagacatgtttataacttgaagatcttggttctgttc |
26847057 |
T |
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