View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20424_low_20 (Length: 327)
Name: NF20424_low_20
Description: NF20424
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20424_low_20 |
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Alignment Details
Target: chr8 (Bit Score: 246; Significance: 1e-136; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 20 - 309
Target Start/End: Complemental strand, 36050860 - 36050571
Alignment:
| Q |
20 |
ataaataaaatattgattcggataagaagtcgatgtttcagtctaaaacaaagaagactttaaatttaaagaatactccctttaaaaatattagctagtc |
119 |
Q |
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| T |
36050860 |
ataaataaattattgattcagataagaagtcgatgtttcaatctaaaacaaagaagactttaaatttaaagaatactccctttaaaaatattagcgagtc |
36050761 |
T |
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| Q |
120 |
gaacatcaaacctccttattcaaaaatatagtttagttgaatgagtgcccatcaactgaacacatacgactatactaatgttgggtgataaggggtcttg |
219 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || ||||| ||||||||||||||||||||| || |
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| T |
36050760 |
gaacatcaaacctccttattcaaaaatatagtttagttgaatgagtgtccatcaactgaacacatatgattataccaatgttgggtgataaggggtcctg |
36050661 |
T |
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| Q |
220 |
ggtatcatcatattgagttttcaacaacaaataaaatttgcgatcacactttaatccaaaatcttatggtagggtggatagatttctaac |
309 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||| |
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| T |
36050660 |
ggtatcatcatattgagttttcaacaacaaataaaatttgcgatcacactttaatccaaaattttatggtagggtggatcgatttctaac |
36050571 |
T |
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