View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20425_high_12 (Length: 362)
Name: NF20425_high_12
Description: NF20425
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20425_high_12 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 317; Significance: 1e-179; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 317; E-Value: 1e-179
Query Start/End: Original strand, 1 - 362
Target Start/End: Original strand, 53306503 - 53306864
Alignment:
| Q |
1 |
gatcccaaatctgcacaatgggccgtaacattgaccgatgtttctgaaggttcatctggctggggaatgagtcttgggggaataggggcgaaacattttc |
100 |
Q |
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| T |
53306503 |
gatcccaaatctgcacaatgggccgtaacattgaccgatgtttctgaaggttcatctggctggggaatgagtcttgggggaataggggcgaaacattttc |
53306602 |
T |
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| Q |
101 |
aagctgaatcctatctaaaattcaacatgggtgataaattttgcttgaagccaggtcttgtatacgccacagatggagattccaaaatagcttctttaat |
200 |
Q |
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| T |
53306603 |
aagctgaatcctatctaaaattcaacatgggtgataaattttgcttgaagccaggtcttgtatacgccacagatggagattccaaaatagcttctttaat |
53306702 |
T |
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| Q |
201 |
gcttcgatctaattggtctttgtgatgannnnnnnnnnncttttctggttgctattattagcctgtttgatttttcctttggaaagcttgaaaccatgat |
300 |
Q |
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| T |
53306703 |
gcttcgatctgattggtctttgtgatgatttttttttttcttttctgtttgctattattagcctgtttgatttttcctttggaaagcttgaaaccatgat |
53306802 |
T |
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| Q |
301 |
tttggattctgaagagaaatctcaacatgcactgtgtacttttaagtttgttcatattctaa |
362 |
Q |
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| T |
53306803 |
tttggattctgaagagaaatctcaacatgcactatgtacttttaagtttgttcatattctaa |
53306864 |
T |
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