View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20425_high_25 (Length: 248)
Name: NF20425_high_25
Description: NF20425
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20425_high_25 |
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Alignment Details
Target: chr4 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 78818 - 79048
Alignment:
| Q |
1 |
tgaaactgttgatatgatttgaaacaaaacattaacaaacatgaaaataaatgataagatgaagaggaaaaaggtagaaaagcattcatcaatcaatcaa |
100 |
Q |
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| T |
78818 |
tgaaactgttgatatgatttgaaacaaaacattaacaaacatgaaaataaatgataagatgaggaggaaaaaggtagaaaagcattcatca----atcaa |
78913 |
T |
|
| Q |
101 |
tcatcaccaaccatcttgggaagaggttttgcattgtactgaggcggttgagatcaaaacaataatccacaaccacgagaggttgtggttgagatgcatc |
200 |
Q |
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| T |
78914 |
tcatcaccaaccatcttgggaggaggttttgcattgtactgaggcggttgagatcaaaacaataatccacaaccacgagaggttgtggttgatatgcatc |
79013 |
T |
|
| Q |
201 |
ttcttcctcaatgatgccaaaacgcagcacaaatc |
235 |
Q |
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||||||||||||||||||||||||||||||||||| |
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| T |
79014 |
ttcttcctcaatgatgccaaaacgcagcacaaatc |
79048 |
T |
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