View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20425_low_4 (Length: 639)

Name: NF20425_low_4
Description: NF20425
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20425_low_4
NF20425_low_4
[»] chr3 (27 HSPs)
chr3 (22-389)||(383742-384108)
chr3 (548-626)||(383664-383742)
chr3 (551-626)||(44647834-44647909)
chr3 (551-622)||(50363089-50363160)
chr3 (549-622)||(54425927-54426000)
chr3 (550-626)||(51263140-51263216)
chr3 (551-622)||(35055848-35055919)
chr3 (551-613)||(20945273-20945335)
chr3 (549-622)||(22659642-22659715)
chr3 (553-622)||(28243821-28243890)
chr3 (558-623)||(39931942-39932007)
chr3 (549-626)||(48901488-48901565)
chr3 (549-626)||(48903054-48903131)
chr3 (17-77)||(387616-387675)
chr3 (551-623)||(31474485-31474557)
chr3 (551-622)||(831333-831404)
chr3 (555-622)||(2421146-2421213)
chr3 (551-622)||(12077716-12077787)
chr3 (551-622)||(13084331-13084402)
chr3 (551-622)||(26517188-26517259)
chr3 (551-622)||(54555897-54555968)
chr3 (551-613)||(41308749-41308811)
chr3 (554-626)||(38668499-38668572)
chr3 (583-623)||(8818132-8818172)
chr3 (554-622)||(14645865-14645933)
chr3 (551-599)||(31531101-31531149)
chr3 (551-623)||(33287927-33287999)
[»] chr4 (24 HSPs)
chr4 (549-626)||(5168038-5168115)
chr4 (551-622)||(16070494-16070565)
chr4 (547-626)||(37625092-37625171)
chr4 (551-622)||(52226082-52226153)
chr4 (550-622)||(29584957-29585029)
chr4 (551-626)||(20291399-20291474)
chr4 (551-622)||(22750813-22750884)
chr4 (551-622)||(25477288-25477359)
chr4 (551-622)||(39197005-39197076)
chr4 (551-626)||(41459646-41459721)
chr4 (551-622)||(43509144-43509215)
chr4 (551-622)||(43800871-43800942)
chr4 (549-622)||(13096511-13096584)
chr4 (549-622)||(20262363-20262436)
chr4 (549-626)||(20293806-20293883)
chr4 (551-618)||(21121034-21121101)
chr4 (551-622)||(38136418-38136489)
chr4 (551-622)||(40411314-40411385)
chr4 (549-623)||(52676082-52676157)
chr4 (557-622)||(14602632-14602697)
chr4 (549-622)||(20185625-20185698)
chr4 (549-622)||(20540034-20540106)
chr4 (551-620)||(56217024-56217093)
chr4 (552-623)||(3684159-3684231)
[»] chr5 (21 HSPs)
chr5 (551-626)||(4857464-4857539)
chr5 (551-622)||(5845239-5845310)
chr5 (554-626)||(16088-16160)
chr5 (551-622)||(25017644-25017715)
chr5 (551-622)||(600828-600899)
chr5 (551-622)||(8717929-8718000)
chr5 (551-622)||(20946150-20946221)
chr5 (547-626)||(27587897-27587976)
chr5 (548-613)||(10934078-10934143)
chr5 (551-611)||(11980790-11980850)
chr5 (551-619)||(29866255-29866323)
chr5 (555-626)||(4738689-4738760)
chr5 (551-622)||(40979182-40979253)
chr5 (568-626)||(19089008-19089066)
chr5 (581-623)||(41521250-41521292)
chr5 (549-622)||(3558995-3559068)
chr5 (549-622)||(36177355-36177428)
chr5 (549-618)||(36750744-36750813)
chr5 (549-622)||(38972095-38972168)
chr5 (549-622)||(42644446-42644519)
chr5 (551-607)||(1558084-1558140)
[»] chr2 (20 HSPs)
chr2 (547-626)||(11459212-11459291)
chr2 (551-623)||(2917072-2917144)
chr2 (551-626)||(2654360-2654435)
chr2 (550-622)||(17250931-17251003)
chr2 (551-622)||(23464746-23464817)
chr2 (551-622)||(41665773-41665844)
chr2 (553-622)||(34330065-34330134)
chr2 (551-623)||(42250850-42250922)
chr2 (551-622)||(375316-375387)
chr2 (551-626)||(16808794-16808869)
chr2 (551-626)||(16848075-16848150)
chr2 (551-622)||(28190661-28190732)
chr2 (551-622)||(44424658-44424729)
chr2 (551-622)||(45214788-45214859)
chr2 (550-616)||(40533128-40533194)
chr2 (553-622)||(24774928-24774997)
chr2 (549-622)||(37355099-37355172)
chr2 (551-623)||(3326786-3326858)
chr2 (551-603)||(13534487-13534539)
chr2 (558-626)||(44421508-44421576)
[»] chr1 (21 HSPs)
chr1 (551-626)||(291605-291680)
chr1 (547-622)||(4817872-4817947)
chr1 (547-622)||(4829672-4829747)
chr1 (549-626)||(47643598-47643675)
chr1 (549-622)||(51390505-51390578)
chr1 (549-613)||(34012558-34012622)
chr1 (551-626)||(8984631-8984706)
chr1 (551-622)||(23982562-23982633)
chr1 (551-622)||(32152220-32152291)
chr1 (550-599)||(1596220-1596269)
chr1 (550-622)||(35365953-35366025)
chr1 (547-622)||(51997017-51997093)
chr1 (551-622)||(3143465-3143536)
chr1 (551-622)||(20564837-20564908)
chr1 (551-622)||(32144373-32144444)
chr1 (551-626)||(40612929-40613004)
chr1 (551-622)||(47070931-47071002)
chr1 (551-622)||(48721838-48721909)
chr1 (551-601)||(34028471-34028521)
chr1 (551-613)||(44652831-44652893)
chr1 (554-622)||(5321996-5322064)
[»] scaffold0116 (1 HSPs)
scaffold0116 (553-626)||(5866-5939)
[»] chr6 (13 HSPs)
chr6 (549-626)||(1763872-1763949)
chr6 (551-623)||(197423-197495)
chr6 (551-623)||(3729484-3729556)
chr6 (551-626)||(31152960-31153035)
chr6 (551-622)||(31945884-31945955)
chr6 (551-622)||(16327186-16327258)
chr6 (551-622)||(16350584-16350656)
chr6 (551-622)||(15981857-15981928)
chr6 (551-622)||(31536075-31536146)
chr6 (549-626)||(29643979-29644055)
chr6 (549-622)||(30465938-30466011)
chr6 (551-616)||(31039215-31039280)
chr6 (551-603)||(30248944-30248996)
[»] chr7 (19 HSPs)
chr7 (550-626)||(21388301-21388377)
chr7 (551-622)||(1324771-1324842)
chr7 (551-626)||(21809618-21809693)
chr7 (551-622)||(33181358-33181429)
chr7 (551-622)||(37048098-37048169)
chr7 (551-613)||(26200939-26201001)
chr7 (565-626)||(6376118-6376179)
chr7 (550-623)||(42983584-42983657)
chr7 (551-622)||(27162874-27162946)
chr7 (554-622)||(43601139-43601207)
chr7 (551-622)||(4089471-4089542)
chr7 (551-626)||(10408539-10408614)
chr7 (551-622)||(13907714-13907785)
chr7 (551-622)||(40263774-40263845)
chr7 (551-613)||(28038859-28038921)
chr7 (549-622)||(2276546-2276619)
chr7 (582-626)||(23876096-23876140)
chr7 (590-626)||(26830132-26830168)
chr7 (551-599)||(39102750-39102798)
[»] chr8 (23 HSPs)
chr8 (551-622)||(36309568-36309639)
chr8 (551-626)||(12762901-12762976)
chr8 (551-626)||(23399749-23399824)
chr8 (551-622)||(30262510-30262581)
chr8 (551-622)||(38761330-38761401)
chr8 (551-626)||(43191449-43191524)
chr8 (551-608)||(7727321-7727378)
chr8 (549-622)||(45185237-45185310)
chr8 (551-622)||(2562701-2562773)
chr8 (551-626)||(27624-27699)
chr8 (551-622)||(24276529-24276600)
chr8 (551-622)||(31746377-31746448)
chr8 (555-622)||(36437564-36437631)
chr8 (551-622)||(40517803-40517874)
chr8 (560-622)||(45183842-45183904)
chr8 (549-622)||(885524-885597)
chr8 (551-620)||(25888660-25888729)
chr8 (549-614)||(33385317-33385382)
chr8 (549-622)||(40337161-40337234)
chr8 (549-622)||(41087037-41087110)
chr8 (550-622)||(3113504-3113576)
chr8 (554-622)||(40790851-40790919)
chr8 (551-619)||(45203824-45203892)
[»] scaffold0699 (1 HSPs)
scaffold0699 (554-622)||(7640-7708)
[»] scaffold0012 (1 HSPs)
scaffold0012 (551-622)||(99788-99859)
[»] scaffold0005 (1 HSPs)
scaffold0005 (557-622)||(214681-214746)
[»] scaffold0013 (1 HSPs)
scaffold0013 (551-623)||(61253-61325)


Alignment Details
Target: chr3 (Bit Score: 301; Significance: 1e-169; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 301; E-Value: 1e-169
Query Start/End: Original strand, 22 - 389
Target Start/End: Complemental strand, 384108 - 383742
Alignment:
Q  22 tggcatgcatccattcataaaatgctcactatttttgcagtgatcattagttaaagtgtgtataaagagatatgaatatgggcacctgattctattataa 121  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| ||||    
T  384108 tggcatgcatccattcataaaatgctcactatttttgctgtgatcattagttaaagtgtgtataaagagatatgaatatgggaacctggttctatcataa 384009  T
Q  122 atactaagggtcccctaatatggacctcttgcttaatggtagaagcatggtatttattagcttattgcttggtcccccaaatttagccagcaataagtat 221  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  384008 atactaagggtcccctaatatggacctcttgcttaatggtacaagcatggtatttattagcttattgcttggtccccc-aatttagccagcaataagtat 383910  T
Q  222 gtaccttacctcaaaaacaaacaaaaatagtgtatgacccttttctgcttttgaaaagccagtttctttgtttattaattattaaataggtcatgctaac 321  Q
    ||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  383909 gtaccttacctcaaaaacaaacaaaaatagtgtatgaccctttt-agcttttgaaaagccagtttctttgtttattgattattaaataggtcatgctaac 383811  T
Q  322 taacttgtgttttaaagacatatattagtaacttaaaaa-taaaaatattcttttgaattttgtacatt 389  Q
    |||||||||||||||| |||||| ||| ||||||||||| ||||||||||||||| |||||||||||||    
T  383810 taacttgtgttttaaaaacatatcttaataacttaaaaagtaaaaatattcttttaaattttgtacatt 383742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 548 - 626
Target Start/End: Complemental strand, 383742 - 383664
Alignment:
Q  548 tcttaattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaatttagta 626  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  383742 tcttaattaatactactaacttgtattagaatgtgaaaagttaaattaaatacacatataaacaaatgataatttagta 383664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 551 - 626
Target Start/End: Complemental strand, 44647909 - 44647834
Alignment:
Q  551 taattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaatttagta 626  Q
    ||||||||||||  ||||||||||| ||| |||||||| |||||||||||| ||||||||||||||||||||||||    
T  44647909 taattaatactatcaacttgtattacaatatgaaaagtcaaattaaatacacatataaacaaatgacaatttagta 44647834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 551 - 622
Target Start/End: Complemental strand, 50363160 - 50363089
Alignment:
Q  551 taattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaattt 622  Q
    ||||||||||||||||||||| ||  ||| |||||||| ||||| |||||| ||| ||||||||||||||||    
T  50363160 taattaatactactaacttgtcttgaaatatgaaaagtcaaatttaatacacatacaaacaaatgacaattt 50363089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 549 - 622
Target Start/End: Original strand, 54425927 - 54426000
Alignment:
Q  549 cttaattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaattt 622  Q
    |||||||||||||||||||  |  ||| ||| |||||| ||||||| |||||| ||||||||||||||||||||    
T  54425927 cttaattaatactactaaccagacttaaaatatgaaaaattaaatttaatacacatataaacaaatgacaattt 54426000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 550 - 626
Target Start/End: Complemental strand, 51263216 - 51263140
Alignment:
Q  550 ttaattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaatttagta 626  Q
    |||||||||||||||||||| | ||  ||| |||||||| ||||| |||||| ||| ||||||| ||||||||||||    
T  51263216 ttaattaatactactaacttatctttaaatatgaaaagtcaaatttaatacacatacaaacaaaggacaatttagta 51263140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 551 - 622
Target Start/End: Complemental strand, 35055919 - 35055848
Alignment:
Q  551 taattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaattt 622  Q
    ||||||||||||||||||||||||  ||| | |||||| ||||| |||||| ||| || |||||||||||||    
T  35055919 taattaatactactaacttgtattgaaatataaaaagtcaaatttaatacacatacaagcaaatgacaattt 35055848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 551 - 613
Target Start/End: Original strand, 20945273 - 20945335
Alignment:
Q  551 taattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaa 613  Q
    ||||||||||||||||||||| ||| ||| |||||||| ||||| |||||| ||| |||||||    
T  20945273 taattaatactactaacttgtcttaaaatatgaaaagtcaaatttaatacacatacaaacaaa 20945335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 549 - 622
Target Start/End: Complemental strand, 22659715 - 22659642
Alignment:
Q  549 cttaattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaattt 622  Q
    |||||||||||||||||| |||| ||  ||| |||||||||||||| |||||| ||| ||||||| || |||||    
T  22659715 cttaattaatactactaatttgttttgaaatatgaaaagttaaatttaatacacatacaaacaaaagataattt 22659642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 553 - 622
Target Start/End: Complemental strand, 28243890 - 28243821
Alignment:
Q  553 attaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaattt 622  Q
    ||||||||||||||||| ||||  ||| | |||||||||||| |||||| | ||||||||| ||||||||    
T  28243890 attaatactactaacttatattgaaatataaaaagttaaatttaatacacacataaacaaaggacaattt 28243821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 558 - 623
Target Start/End: Complemental strand, 39932007 - 39931942
Alignment:
Q  558 tactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaattta 623  Q
    |||||||||||||| ||| ||| |||||| | ||||| |||||| ||| |||||||||||||||||    
T  39932007 tactactaacttgtcttaaaatatgaaaactaaaatttaatacacatacaaacaaatgacaattta 39931942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 549 - 626
Target Start/End: Original strand, 48901488 - 48901565
Alignment:
Q  549 cttaattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaatttagta 626  Q
    |||||||||||||| ||| || | ||| ||| | |||||| ||||| |||| ||||| ||||||||||||||||||||    
T  48901488 cttaattaatactattaatttttcttaaaatattaaaagtcaaatttaatatatatacaaacaaatgacaatttagta 48901565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 549 - 626
Target Start/End: Original strand, 48903054 - 48903131
Alignment:
Q  549 cttaattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaatttagta 626  Q
    |||||||||||||||||| || | ||  ||| | |||||| ||||| |||| ||||| ||||||||||||||||||||    
T  48903054 cttaattaatactactaatttttcttgaaatattaaaagtcaaatttaatatatatacaaacaaatgacaatttagta 48903131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 77
Target Start/End: Complemental strand, 387675 - 387616
Alignment:
Q  17 atatatggcatgcatccattcataaaatgctcactatttttgcagtgatcattagttaaag 77  Q
    ||||||| |||||||| ||||||||| ||||||||| |||| | |||||||||||||||||    
T  387675 atatatgacatgcatctattcataaa-tgctcactagttttcctgtgatcattagttaaag 387616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 551 - 623
Target Start/End: Complemental strand, 31474557 - 31474485
Alignment:
Q  551 taattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaattta 623  Q
    |||||||||||||||| |||| ||| ||| ||||||  |||||| |||||| ||| |||||||||| ||||||    
T  31474557 taattaatactactaatttgtcttaaaatttgaaaaactaaatttaatacacatacaaacaaatgataattta 31474485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 551 - 622
Target Start/End: Original strand, 831333 - 831404
Alignment:
Q  551 taattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaattt 622  Q
    |||||||||||| |||||| ||||  ||| |||||| | ||||| |||||| ||||||||||| ||||||||    
T  831333 taattaatactaataacttatattgaaatatgaaaaatcaaatttaatacacatataaacaaaggacaattt 831404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 555 - 622
Target Start/End: Complemental strand, 2421213 - 2421146
Alignment:
Q  555 taatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaattt 622  Q
    ||||||||||||||||| || |||| | |||||| ||||| |||| | ||| ||||||||||||||||    
T  2421213 taatactactaacttgtctttgaatataaaaagtcaaatttaatatacatacaaacaaatgacaattt 2421146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 551 - 622
Target Start/End: Original strand, 12077716 - 12077787
Alignment:
Q  551 taattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaattt 622  Q
    ||||||||||| ||| ||||| ||  ||| |||||||| ||||| |||||| ||| ||||||||||||||||    
T  12077716 taattaatacttctatcttgttttgaaatatgaaaagtcaaatttaatacacatacaaacaaatgacaattt 12077787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 551 - 622
Target Start/End: Original strand, 13084331 - 13084402
Alignment:
Q  551 taattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaattt 622  Q
    |||||||| |||||||||||| ||| ||| |||||||| ||||| |||||| ||| ||||||| || |||||    
T  13084331 taattaatgctactaacttgtgttaaaatttgaaaagtcaaatttaatacacatacaaacaaaagataattt 13084402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 551 - 622
Target Start/End: Original strand, 26517188 - 26517259
Alignment:
Q  551 taattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaattt 622  Q
    ||||||||||||||||||||| ||  ||| |||||||| ||||| |||||| ||| ||| ||| ||||||||    
T  26517188 taattaatactactaacttgtcttgaaatatgaaaagtcaaatttaatacacatacaaataaaggacaattt 26517259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 551 - 622
Target Start/End: Original strand, 54555897 - 54555968
Alignment:
Q  551 taattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaattt 622  Q
    |||||||||||||||| |||| ||| | | |||||||||||| | |||| | |||||||||||||| |||||    
T  54555897 taattaatactactaatttgtcttaaagtatgaaaagttaaaattaatatacatataaacaaatgataattt 54555968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 551 - 613
Target Start/End: Original strand, 41308749 - 41308811
Alignment:
Q  551 taattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaa 613  Q
    ||||||||||||||||||||| ||  ||| |||||||  ||||| |||||| |||||||||||    
T  41308749 taattaatactactaacttgtcttgaaatatgaaaagccaaatttaatacacatataaacaaa 41308811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 554 - 626
Target Start/End: Original strand, 38668499 - 38668572
Alignment:
Q  554 ttaatactactaactt-gtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaatttagta 626  Q
    ||||||||||||| || || || ||||  ||||||  |||||||||||| ||||||| ||||||||||||||||    
T  38668499 ttaatactactaattttgttttggaatacgaaaagacaaattaaatacacatataaataaatgacaatttagta 38668572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 583 - 623
Target Start/End: Original strand, 8818132 - 8818172
Alignment:
Q  583 aaaagttaaattaaatacatatataaacaaatgacaattta 623  Q
    |||||| ||||| |||| |||||||||||||||||||||||    
T  8818132 aaaagtcaaatttaatatatatataaacaaatgacaattta 8818172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 554 - 622
Target Start/End: Original strand, 14645865 - 14645933
Alignment:
Q  554 ttaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaattt 622  Q
    |||||||||||||||||| ||  ||| |||||| | ||||| |||||| ||| |||||||| |||||||    
T  14645865 ttaatactactaacttgtcttgaaatttgaaaaatcaaatttaatacacatacaaacaaataacaattt 14645933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 551 - 599
Target Start/End: Original strand, 31531101 - 31531149
Alignment:
Q  551 taattaatactactaacttgtattagaatgtgaaaagttaaattaaata 599  Q
    ||||||||||||||||||||| ||  ||| |||||||||||||| ||||    
T  31531101 taattaatactactaacttgtcttgaaatttgaaaagttaaatttaata 31531149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 551 - 623
Target Start/End: Complemental strand, 33287999 - 33287927
Alignment:
Q  551 taattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaattta 623  Q
    ||||||||||||||||||||| ||  ||| | |||||| ||||| |||||| | | ||||||| |||||||||    
T  33287999 taattaatactactaacttgtcttgaaatataaaaagtcaaatttaatacacaaacaaacaaaggacaattta 33287927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 6e-17; HSPs: 24)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 549 - 626
Target Start/End: Complemental strand, 5168115 - 5168038
Alignment:
Q  549 cttaattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaatttagta 626  Q
    ||||||||||||||||| ||||||||  ||| |||||| ||||||| |||||| ||| ||||||||||||||||||||    
T  5168115 cttaattaatactactagcttgtattgaaatatgaaaaattaaatttaatacacatacaaacaaatgacaatttagta 5168038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 551 - 622
Target Start/End: Complemental strand, 16070565 - 16070494
Alignment:
Q  551 taattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaattt 622  Q
    ||||||||||||||||||||||||  ||| |||||||| ||||| |||||||||||||||||| || |||||    
T  16070565 taattaatactactaacttgtattgaaatatgaaaagtcaaatttaatacatatataaacaaaagataattt 16070494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 547 - 626
Target Start/End: Original strand, 37625092 - 37625171
Alignment:
Q  547 ctcttaattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaatttagta 626  Q
    ||||||||||||||||||||||  | ||  ||| |||||||| ||||| |||||| |||||||||||||| |||||||||    
T  37625092 ctcttaattaatactactaactaatcttgaaatatgaaaagtcaaatttaatacacatataaacaaatgataatttagta 37625171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 551 - 622
Target Start/End: Complemental strand, 52226153 - 52226082
Alignment:
Q  551 taattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaattt 622  Q
    ||||||||||||||||||||| ||  ||| |||||||| ||||| |||||| ||||||||||| ||||||||    
T  52226153 taattaatactactaacttgtcttgaaatatgaaaagtcaaatttaatacacatataaacaaaggacaattt 52226082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 550 - 622
Target Start/End: Complemental strand, 29585029 - 29584957
Alignment:
Q  550 ttaattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaattt 622  Q
    ||||||||||||| |||||||| ||| ||| | |||||| ||||| |||||| ||| ||||||||||||||||    
T  29585029 ttaattaatactattaacttgtcttaaaatataaaaagtcaaatttaatacacatacaaacaaatgacaattt 29584957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 551 - 626
Target Start/End: Complemental strand, 20291474 - 20291399
Alignment:
Q  551 taattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaatttagta 626  Q
    ||||||||||||||||||| | ||  ||| |||||||| ||||| |||||| ||| |||||||||| |||||||||    
T  20291474 taattaatactactaacttatcttgaaatatgaaaagtcaaatttaatacacatacaaacaaatgataatttagta 20291399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 551 - 622
Target Start/End: Original strand, 22750813 - 22750884
Alignment:
Q  551 taattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaattt 622  Q
    |||||||||||||||| |||| ||  ||| |||||||| ||||| |||||| ||| ||||||||||||||||    
T  22750813 taattaatactactaagttgtcttgaaatatgaaaagtcaaatttaatacacatacaaacaaatgacaattt 22750884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 551 - 622
Target Start/End: Complemental strand, 25477359 - 25477288
Alignment:
Q  551 taattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaattt 622  Q
    ||||||||||||||| ||||| ||  ||| |||||||| ||||| |||||| ||| ||||||||||||||||    
T  25477359 taattaatactactatcttgtcttgaaatatgaaaagtcaaatttaatacacatacaaacaaatgacaattt 25477288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 551 - 622
Target Start/End: Original strand, 39197005 - 39197076
Alignment:
Q  551 taattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaattt 622  Q
    ||||||||| ||||||||||| ||| ||| |||||||| ||||| |||||| ||| ||||||| ||||||||    
T  39197005 taattaataatactaacttgttttaaaatttgaaaagtcaaatttaatacacatacaaacaaaagacaattt 39197076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 551 - 626
Target Start/End: Complemental strand, 41459721 - 41459646
Alignment:
Q  551 taattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaatttagta 626  Q
    |||||||||||||||||||||  |  ||| |||||||| ||||| |||||| ||||||| ||| ||||||||||||    
T  41459721 taattaatactactaacttgtcatgaaatatgaaaagtcaaatttaatacacatataaataaaagacaatttagta 41459646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 551 - 622
Target Start/End: Complemental strand, 43509215 - 43509144
Alignment:
Q  551 taattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaattt 622  Q
    |||||||||||||||| |||| ||  ||| |||||||||||||| |||||| ||| ||||||| ||||||||    
T  43509215 taattaatactactaatttgtcttgaaatttgaaaagttaaatttaatacacatacaaacaaaagacaattt 43509144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 551 - 622
Target Start/End: Complemental strand, 43800942 - 43800871
Alignment:
Q  551 taattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaattt 622  Q
    ||||||||||||| ||||||| ||  ||| |||||||| |||||||||||| ||| ||||||| ||||||||    
T  43800942 taattaatactaccaacttgtcttgaaatatgaaaagtcaaattaaatacacatacaaacaaaggacaattt 43800871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 549 - 622
Target Start/End: Original strand, 13096511 - 13096584
Alignment:
Q  549 cttaattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaattt 622  Q
    |||||||||||||| |||||||| ||| ||| ||||||||||| ||  || || ||| ||||||||||||||||    
T  13096511 cttaattaatactagtaacttgtcttaaaatatgaaaagttaatttttatgcacatagaaacaaatgacaattt 13096584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 549 - 622
Target Start/End: Original strand, 20262363 - 20262436
Alignment:
Q  549 cttaattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaattt 622  Q
    ||||||||||||||||| ||||| ||  ||| |||||||| ||||| |||||| ||| |||||||| |||||||    
T  20262363 cttaattaatactactatcttgttttgaaatatgaaaagtcaaatttaatacacatacaaacaaataacaattt 20262436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 549 - 626
Target Start/End: Complemental strand, 20293883 - 20293806
Alignment:
Q  549 cttaattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaatttagta 626  Q
    |||| |||||||||||||||||||||  ||| |||| ||| ||||| |||||| ||| ||||||| ||||||| ||||    
T  20293883 cttacttaatactactaacttgtattgaaatatgaatagtcaaatttaatacaaatacaaacaaaagacaattcagta 20293806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 551 - 618
Target Start/End: Complemental strand, 21121101 - 21121034
Alignment:
Q  551 taattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgaca 618  Q
    ||||||||||||||||||||| ||| ||| | |||||||||||| |||||  ||| ||||||| ||||    
T  21121101 taattaatactactaacttgtcttaaaatataaaaagttaaatttaatacgcatacaaacaaaagaca 21121034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 551 - 622
Target Start/End: Complemental strand, 38136489 - 38136418
Alignment:
Q  551 taattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaattt 622  Q
    ||||||||||||||||||||  ||  ||| |||||| | ||||||| |||| ||| ||||||||||||||||    
T  38136489 taattaatactactaacttgccttgaaatatgaaaaatcaaattaattacacatacaaacaaatgacaattt 38136418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 551 - 622
Target Start/End: Original strand, 40411314 - 40411385
Alignment:
Q  551 taattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaattt 622  Q
    ||||||||| || || ||||| ||  ||| |||||||||||||| |||||| ||| ||||||||||||||||    
T  40411314 taattaatattattatcttgtcttgaaatatgaaaagttaaatttaatacacatacaaacaaatgacaattt 40411385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 549 - 623
Target Start/End: Complemental strand, 52676157 - 52676082
Alignment:
Q  549 cttaattaatactactaacttgtattag-aatgtgaaaagttaaattaaatacatatataaacaaatgacaattta 623  Q
    |||||||||||||| |||||||| || | ||| |||||||| ||||| |||||| ||||||| ||| |||||||||    
T  52676157 cttaattaatactattaacttgtctttgaaatttgaaaagtcaaatttaatacacatataaataaaggacaattta 52676082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 557 - 622
Target Start/End: Original strand, 14602632 - 14602697
Alignment:
Q  557 atactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaattt 622  Q
    ||||||||||||| | ||| ||| | |||||| ||||| |||||| ||| ||||||||||||||||    
T  14602632 atactactaacttatcttaaaatataaaaagtcaaatttaatacacatacaaacaaatgacaattt 14602697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 549 - 622
Target Start/End: Original strand, 20185625 - 20185698
Alignment:
Q  549 cttaattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaattt 622  Q
    |||||||||||||||||| |||| ||  ||| |||||||| ||||| |||||| ||| ||||||| | ||||||    
T  20185625 cttaattaatactactaatttgtcttgaaatatgaaaagtcaaatttaatacaaatacaaacaaaaggcaattt 20185698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 549 - 622
Target Start/End: Complemental strand, 20540106 - 20540034
Alignment:
Q  549 cttaattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaattt 622  Q
    |||||||||||||| |||||||||||| ||| || ||||| ||||| |||||| ||| |||||||  |||||||    
T  20540106 cttaattaatactagtaacttgtattaaaatatg-aaagtcaaatttaatacacatacaaacaaagaacaattt 20540034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 551 - 620
Target Start/End: Original strand, 56217024 - 56217093
Alignment:
Q  551 taattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaat 620  Q
    ||||||||||||||| ||| | ||  ||| |||||||||||||| |||||| ||| ||||||| ||||||    
T  56217024 taattaatactactatcttatcttgaaatatgaaaagttaaatttaatacaaatacaaacaaaggacaat 56217093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 552 - 623
Target Start/End: Original strand, 3684159 - 3684231
Alignment:
Q  552 aattaatactactaacttgtattagaatgtgaaaa-gttaaattaaatacatatataaacaaatgacaattta 623  Q
    |||||||||||||||||| | ||  ||| |||||| |||||||| |||| | |||||||||||||| ||||||    
T  3684159 aattaatactactaacttatcttgaaatatgaaaacgttaaatttaatatacatataaacaaatgataattta 3684231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 551 - 626
Target Start/End: Original strand, 4857464 - 4857539
Alignment:
Q  551 taattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaatttagta 626  Q
    ||||||||||||||||||| | ||| ||| |||||||| ||||| |||||| ||| ||||||||||||||||||||    
T  4857464 taattaatactactaacttatcttaaaatatgaaaagtcaaatttaatacacatacaaacaaatgacaatttagta 4857539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 551 - 622
Target Start/End: Complemental strand, 5845310 - 5845239
Alignment:
Q  551 taattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaattt 622  Q
    ||||||||||||||||||||||||  ||| |||||||| ||||| |||||| ||| ||||||||||||||||    
T  5845310 taattaatactactaacttgtattgaaatatgaaaagtcaaatttaatacacatacaaacaaatgacaattt 5845239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 554 - 626
Target Start/End: Original strand, 16088 - 16160
Alignment:
Q  554 ttaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaatttagta 626  Q
    |||||||||||||||||| ||  |||||||||||| ||||| |||||| ||| ||||||| ||||||||||||    
T  16088 ttaatactactaacttgtcttgaaatgtgaaaagtcaaatttaatacaaatacaaacaaaggacaatttagta 16160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 551 - 622
Target Start/End: Original strand, 25017644 - 25017715
Alignment:
Q  551 taattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaattt 622  Q
    |||||||||||| |||||||| ||| ||| |||||||| ||||| |||||| ||| ||||||||||||||||    
T  25017644 taattaatactattaacttgtcttaaaatatgaaaagtcaaatttaatacacatacaaacaaatgacaattt 25017715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 551 - 622
Target Start/End: Complemental strand, 600899 - 600828
Alignment:
Q  551 taattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaattt 622  Q
    ||||||||| ||||||||||| ||| ||| | |||| | ||||| |||||||||| ||||||||||||||||    
T  600899 taattaatattactaacttgtcttaaaatataaaaaatcaaatttaatacatatacaaacaaatgacaattt 600828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 551 - 622
Target Start/End: Original strand, 8717929 - 8718000
Alignment:
Q  551 taattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaattt 622  Q
    ||||||||| ||| ||||||| ||  ||| |||||||| ||||| |||||||||| ||||||||||||||||    
T  8717929 taattaataatacgaacttgtcttgaaatatgaaaagtcaaatttaatacatatacaaacaaatgacaattt 8718000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 551 - 622
Target Start/End: Complemental strand, 20946221 - 20946150
Alignment:
Q  551 taattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaattt 622  Q
    |||||| |||||||||||||| ||  ||| |||||||| ||||| |||||| ||| ||||||||||||||||    
T  20946221 taattagtactactaacttgttttgaaatatgaaaagtcaaatttaatacacatacaaacaaatgacaattt 20946150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 547 - 626
Target Start/End: Complemental strand, 27587976 - 27587897
Alignment:
Q  547 ctcttaattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaatttagta 626  Q
    ||||||| ||||||||||||||||||||  ||| |||||| | ||||| |||||| ||| | ||||| ||||||||||||    
T  27587976 ctcttaaataatactactaacttgtattgaaatttgaaaaatcaaatttaatacacatacatacaaaggacaatttagta 27587897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 548 - 613
Target Start/End: Complemental strand, 10934143 - 10934078
Alignment:
Q  548 tcttaattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaa 613  Q
    |||||||||||| ||||||||||||||  ||| |||||||| ||||| |||||| ||| |||||||    
T  10934143 tcttaattaatattactaacttgtattgaaatatgaaaagtcaaatttaatacacatacaaacaaa 10934078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 551 - 611
Target Start/End: Complemental strand, 11980850 - 11980790
Alignment:
Q  551 taattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaaca 611  Q
    ||||||||||||||||| ||| ||| ||| |||||||| ||||| |||||| |||||||||    
T  11980850 taattaatactactaacatgtcttaaaatatgaaaagtcaaatttaatacacatataaaca 11980790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 551 - 619
Target Start/End: Complemental strand, 29866323 - 29866255
Alignment:
Q  551 taattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaa 619  Q
    ||||||||||||||||||||| ||  ||| |||||||| ||||| |||||| ||| ||||||| |||||    
T  29866323 taattaatactactaacttgtcttgaaatatgaaaagtcaaatttaatacacatacaaacaaaggacaa 29866255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 555 - 626
Target Start/End: Complemental strand, 4738760 - 4738689
Alignment:
Q  555 taatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaatttagta 626  Q
    ||||||||||||||||| ||  ||| |||||||| ||||| |||||| ||| ||||||| | ||||||||||    
T  4738760 taatactactaacttgtcttgaaatatgaaaagtcaaatttaatacacataaaaacaaaggtcaatttagta 4738689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 551 - 622
Target Start/End: Original strand, 40979182 - 40979253
Alignment:
Q  551 taattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaattt 622  Q
    ||||||||||||||| ||||| ||  ||| |||||||| ||||| |||||| ||| ||||||| ||||||||    
T  40979182 taattaatactactatcttgtctttaaatatgaaaagtcaaatttaatacacatacaaacaaaggacaattt 40979253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 568 - 626
Target Start/End: Original strand, 19089008 - 19089066
Alignment:
Q  568 ttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaatttagta 626  Q
    |||| ||| ||| |||||||| ||||| |||||| ||| ||||||||||||||||||||    
T  19089008 ttgttttaaaatatgaaaagtcaaatttaatacaaatacaaacaaatgacaatttagta 19089066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 581 - 623
Target Start/End: Complemental strand, 41521292 - 41521250
Alignment:
Q  581 tgaaaagttaaattaaatacatatataaacaaatgacaattta 623  Q
    |||||||| ||||| |||||| |||||||||||||||||||||    
T  41521292 tgaaaagtcaaatttaatacacatataaacaaatgacaattta 41521250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 549 - 622
Target Start/End: Original strand, 3558995 - 3559068
Alignment:
Q  549 cttaattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaattt 622  Q
    |||||| |||||||||||||| | ||  ||| |||||||| ||||| |||||| ||| ||||||| ||||||||    
T  3558995 cttaataaatactactaacttatcttgaaatatgaaaagtcaaatttaatacacatacaaacaaaggacaattt 3559068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 549 - 622
Target Start/End: Complemental strand, 36177428 - 36177355
Alignment:
Q  549 cttaattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaattt 622  Q
    ||||||||||||||||   |||| ||  ||| |||||||| ||||| |||||| ||| ||||||||||||||||    
T  36177428 cttaattaatactacttttttgttttgaaatatgaaaagtcaaatttaatacacatacaaacaaatgacaattt 36177355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 549 - 618
Target Start/End: Original strand, 36750744 - 36750813
Alignment:
Q  549 cttaattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgaca 618  Q
    ||||||||||||| ||||||||| ||  ||| | |||||| ||||| |||||| ||||||||||| ||||    
T  36750744 cttaattaatactgctaacttgttttgaaatataaaaagtcaaatttaatacacatataaacaaaggaca 36750813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 549 - 622
Target Start/End: Original strand, 38972095 - 38972168
Alignment:
Q  549 cttaattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaattt 622  Q
    ||||||||||||||||||||| | ||  ||| | |||||| ||||| |||||| ||| ||||||| ||||||||    
T  38972095 cttaattaatactactaacttatcttgaaatataaaaagtcaaatttaatacacatacaaacaaaggacaattt 38972168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 549 - 622
Target Start/End: Original strand, 42644446 - 42644519
Alignment:
Q  549 cttaattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaattt 622  Q
    |||||||||||| |||||||||| ||  ||| |||||||  ||||| |||| | ||| ||||||||||||||||    
T  42644446 cttaattaatacaactaacttgtcttgaaatatgaaaagacaaatttaatatacatacaaacaaatgacaattt 42644519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 551 - 607
Target Start/End: Complemental strand, 1558140 - 1558084
Alignment:
Q  551 taattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatata 607  Q
    ||||||||| || |||||| | ||| ||| |||||||||||||| ||||||||||||    
T  1558140 taattaatattattaacttattttaaaatatgaaaagttaaatttaatacatatata 1558084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 547 - 626
Target Start/End: Complemental strand, 11459291 - 11459212
Alignment:
Q  547 ctcttaattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaatttagta 626  Q
    ||||||||||||||||||||||||| ||  ||| |||||| | ||||| |||||||||| ||||||| ||||||||||||    
T  11459291 ctcttaattaatactactaacttgtcttgaaatttgaaaaatcaaatttaatacatatacaaacaaaggacaatttagta 11459212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 551 - 623
Target Start/End: Original strand, 2917072 - 2917144
Alignment:
Q  551 taattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaattta 623  Q
    ||||||||||||||||||||| ||| ||| | |||||||||||| |||||| ||| ||||||| |||||||||    
T  2917072 taattaatactactaacttgtcttaaaatataaaaagttaaatttaatacacatacaaacaaaagacaattta 2917144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 551 - 626
Target Start/End: Complemental strand, 2654435 - 2654360
Alignment:
Q  551 taattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaatttagta 626  Q
    |||||||||||| |||||| | ||| ||| |||||| | |||||||||||| ||||||||||| ||||||||||||    
T  2654435 taattaatactattaacttatcttaaaatatgaaaaatcaaattaaatacacatataaacaaaagacaatttagta 2654360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 550 - 622
Target Start/End: Original strand, 17250931 - 17251003
Alignment:
Q  550 ttaattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaattt 622  Q
    |||||||||||||||| ||||| ||  ||| |||||||| || ||||||||| ||| ||||||||||||||||    
T  17250931 ttaattaatactactatcttgtcttgaaatatgaaaagtcaatttaaatacacatacaaacaaatgacaattt 17251003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 551 - 622
Target Start/End: Complemental strand, 23464817 - 23464746
Alignment:
Q  551 taattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaattt 622  Q
    ||||||||||||||||||||| ||  ||| |||||||| ||||| |||||||||| ||| ||| ||||||||    
T  23464817 taattaatactactaacttgttttgaaatatgaaaagtcaaatttaatacatatacaaataaaggacaattt 23464746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 551 - 622
Target Start/End: Complemental strand, 41665844 - 41665773
Alignment:
Q  551 taattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaattt 622  Q
    |||||||||||| |||||||| ||  ||| |||||||||||||| |||||| ||| ||||||| ||||||||    
T  41665844 taattaatactattaacttgtcttgaaatatgaaaagttaaatttaatacacatacaaacaaaggacaattt 41665773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 553 - 622
Target Start/End: Complemental strand, 34330134 - 34330065
Alignment:
Q  553 attaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaattt 622  Q
    ||||||||||||| ||||| ||  ||| |||||||||||||| |||||| ||| ||||||| ||||||||    
T  34330134 attaatactactatcttgtcttgaaatatgaaaagttaaatttaatacacatacaaacaaaggacaattt 34330065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 551 - 623
Target Start/End: Original strand, 42250850 - 42250922
Alignment:
Q  551 taattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaattta 623  Q
    |||||||||||| |||||||| ||  ||| | |||||| ||||| |||||| ||||||| |||||||||||||    
T  42250850 taattaatactattaacttgtcttgaaatataaaaagtcaaatttaatacacatataaataaatgacaattta 42250922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 551 - 622
Target Start/End: Original strand, 375316 - 375387
Alignment:
Q  551 taattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaattt 622  Q
    |||| |||||||||||||||| ||  ||| |||||| | ||||| |||||| ||| ||||||||||||||||    
T  375316 taatcaatactactaacttgtcttgaaatatgaaaaatcaaatttaatacacatacaaacaaatgacaattt 375387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 551 - 626
Target Start/End: Original strand, 16808794 - 16808869
Alignment:
Q  551 taattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaatttagta 626  Q
    ||||| ||||||||||||||| ||  ||| |||||| |||| || |||| | ||| ||||||||||||||||||||    
T  16808794 taatttatactactaacttgtcttgaaatatgaaaaattaattttaatatacatacaaacaaatgacaatttagta 16808869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 551 - 626
Target Start/End: Original strand, 16848075 - 16848150
Alignment:
Q  551 taattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaatttagta 626  Q
    ||||| ||||||||||||||| ||  ||| |||||| |||| || |||| | ||| ||||||||||||||||||||    
T  16848075 taatttatactactaacttgtcttgaaatatgaaaaattaattttaatatacatacaaacaaatgacaatttagta 16848150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 551 - 622
Target Start/End: Complemental strand, 28190732 - 28190661
Alignment:
Q  551 taattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaattt 622  Q
    |||||| ||||||||| |||| ||  ||| |||||| ||||| | |||||||||| ||||||||||||||||    
T  28190732 taattattactactaaattgtcttgaaatatgaaaaattaaacttaatacatatacaaacaaatgacaattt 28190661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 551 - 622
Target Start/End: Complemental strand, 44424729 - 44424658
Alignment:
Q  551 taattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaattt 622  Q
    ||||||||||||||| ||||| ||  ||| |||||||| ||||| |||||| ||| ||||||| ||||||||    
T  44424729 taattaatactactatcttgtcttgaaatatgaaaagtcaaatttaatacacatacaaacaaaggacaattt 44424658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 551 - 622
Target Start/End: Complemental strand, 45214859 - 45214788
Alignment:
Q  551 taattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaattt 622  Q
    |||||||||||||||| || | ||| ||| |||||||||||||| |||||| ||| ||||||| | ||||||    
T  45214859 taattaatactactaatttatcttaaaatatgaaaagttaaatttaatacacatacaaacaaagggcaattt 45214788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 550 - 616
Target Start/End: Complemental strand, 40533194 - 40533128
Alignment:
Q  550 ttaattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatga 616  Q
    |||||||||||||||||||  | ||| ||| | |||||| |||||||||||| ||||||| ||||||    
T  40533194 ttaattaatactactaactcttcttaaaatataaaaagtcaaattaaatacaaatataaataaatga 40533128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 553 - 622
Target Start/End: Complemental strand, 24774997 - 24774928
Alignment:
Q  553 attaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaattt 622  Q
    |||| |||||||||||||| ||  ||| |||||||| ||||| |||||| ||| ||||||| ||||||||    
T  24774997 attagtactactaacttgtcttgaaatatgaaaagtcaaatttaatacacatacaaacaaaagacaattt 24774928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 549 - 622
Target Start/End: Complemental strand, 37355172 - 37355099
Alignment:
Q  549 cttaattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaattt 622  Q
    |||||||||||||  || ||||| ||  ||| |||||||| ||||| |||||| ||| ||||||||||||||||    
T  37355172 cttaattaatacttttatcttgtcttgaaatatgaaaagtcaaatttaatacacatacaaacaaatgacaattt 37355099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 551 - 623
Target Start/End: Complemental strand, 3326858 - 3326786
Alignment:
Q  551 taattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaattta 623  Q
    |||||||||||||||  || | ||  ||| ||||||||||||||  ||||| ||||||||||| |||||||||    
T  3326858 taattaatactactacgttatcttgaaatatgaaaagttaaattttatacacatataaacaaaggacaattta 3326786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 551 - 603
Target Start/End: Complemental strand, 13534539 - 13534487
Alignment:
Q  551 taattaatactactaacttgtattagaatgtgaaaagttaaattaaatacata 603  Q
    ||||||||||||||||||||| ||  ||| |||||||| ||||| ||||||||    
T  13534539 taattaatactactaacttgtcttgaaatatgaaaagtcaaatttaatacata 13534487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 558 - 626
Target Start/End: Complemental strand, 44421576 - 44421508
Alignment:
Q  558 tactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaatttagta 626  Q
    |||||||||||||| ||| ||| | ||||   ||||| |||||| ||| ||||||||||||||||||||    
T  44421576 tactactaacttgtcttaaaatttaaaaaaacaaatttaatacacatacaaacaaatgacaatttagta 44421508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 551 - 626
Target Start/End: Original strand, 291605 - 291680
Alignment:
Q  551 taattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaatttagta 626  Q
    ||||||||||||||||||| | ||| ||| | |||||||||||| |||||| ||| ||||||||||||||||||||    
T  291605 taattaatactactaacttatcttaaaatataaaaagttaaatttaatacaaatacaaacaaatgacaatttagta 291680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 547 - 622
Target Start/End: Original strand, 4817872 - 4817947
Alignment:
Q  547 ctcttaattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaattt 622  Q
    ||||||||||||||||||||||||| ||  ||| |||||||| ||||| |||||| ||| ||||||| ||||||||    
T  4817872 ctcttaattaatactactaacttgtcttgaaatttgaaaagtcaaatttaatacacatacaaacaaaagacaattt 4817947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 547 - 622
Target Start/End: Original strand, 4829672 - 4829747
Alignment:
Q  547 ctcttaattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaattt 622  Q
    ||||||||||||||||||||||||| ||  ||| |||||||| ||||| |||||| ||| ||||||| ||||||||    
T  4829672 ctcttaattaatactactaacttgtcttgaaatttgaaaagtcaaatttaatacacatacaaacaaaagacaattt 4829747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 549 - 626
Target Start/End: Complemental strand, 47643675 - 47643598
Alignment:
Q  549 cttaattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaatttagta 626  Q
    ||||||||||||||||||||||| ||  ||| |||||||| ||||| |||||| ||  ||||||| ||||||||||||    
T  47643675 cttaattaatactactaacttgtcttgaaatttgaaaagtcaaatttaatacacatgcaaacaaaggacaatttagta 47643598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 549 - 622
Target Start/End: Original strand, 51390505 - 51390578
Alignment:
Q  549 cttaattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaattt 622  Q
    ||||||||| ||||||||||||| ||  ||| |||||||| ||||| |||||| ||| ||||||||||||||||    
T  51390505 cttaattaaaactactaacttgtcttgaaatatgaaaagtcaaatttaatacacatacaaacaaatgacaattt 51390578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 549 - 613
Target Start/End: Complemental strand, 34012622 - 34012558
Alignment:
Q  549 cttaattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaa 613  Q
    ||||||||||||||||| ||||| ||  ||| |||||||||||||| |||||| |||||||||||    
T  34012622 cttaattaatactactatcttgtcttgaaatatgaaaagttaaatttaatacacatataaacaaa 34012558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 551 - 626
Target Start/End: Original strand, 8984631 - 8984706
Alignment:
Q  551 taattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaatttagta 626  Q
    |||||||||||||||| || | ||  ||| |||||||| ||||| |||||| ||| ||||||||||||||||||||    
T  8984631 taattaatactactaatttatcttgaaatatgaaaagtcaaatttaatacacatacaaacaaatgacaatttagta 8984706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 551 - 622
Target Start/End: Original strand, 23982562 - 23982633
Alignment:
Q  551 taattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaattt 622  Q
    ||||||||||||||||||| | ||  ||| |||||||| ||||| |||||||||| ||||||||| ||||||    
T  23982562 taattaatactactaacttatcttgaaatatgaaaagtcaaatttaatacatatacaaacaaatgtcaattt 23982633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 551 - 622
Target Start/End: Complemental strand, 32152291 - 32152220
Alignment:
Q  551 taattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaattt 622  Q
    ||||||||||||||||||| | ||| ||| |||||||| ||||| |||||| ||| |||||||| |||||||    
T  32152291 taattaatactactaacttatcttaaaatatgaaaagtcaaatttaatacacatacaaacaaataacaattt 32152220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 550 - 599
Target Start/End: Original strand, 1596220 - 1596269
Alignment:
Q  550 ttaattaatactactaacttgtattagaatgtgaaaagttaaattaaata 599  Q
    |||||||||||||| ||||||| || ||||||||||||||||||| ||||    
T  1596220 ttaattaatactaccaacttgttttggaatgtgaaaagttaaattcaata 1596269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 550 - 622
Target Start/End: Original strand, 35365953 - 35366025
Alignment:
Q  550 ttaattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaattt 622  Q
    ||||||||||||  |||||||| ||| ||| |||||||| ||||| |||||| ||| ||||||| ||||||||    
T  35365953 ttaattaatactgttaacttgtcttaaaatatgaaaagtcaaatttaatacacatacaaacaaaagacaattt 35366025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 547 - 622
Target Start/End: Complemental strand, 51997093 - 51997017
Alignment:
Q  547 ctcttaattaatactactaacttgtattag-aatgtgaaaagttaaattaaatacatatataaacaaatgacaattt 622  Q
    ||||||||||||||||||||||||| || | ||| |||||||| ||||| |||||| ||| ||||||| ||| ||||    
T  51997093 ctcttaattaatactactaacttgtctttgaaatttgaaaagtcaaatttaatacacatacaaacaaaggacgattt 51997017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 551 - 622
Target Start/End: Complemental strand, 3143536 - 3143465
Alignment:
Q  551 taattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaattt 622  Q
    ||||||||||||||| ||||| ||  ||| |||||||| ||||| |||||| ||| ||||||| ||||||||    
T  3143536 taattaatactactatcttgtcttgaaatatgaaaagtcaaatttaatacacataaaaacaaaagacaattt 3143465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 551 - 622
Target Start/End: Complemental strand, 20564908 - 20564837
Alignment:
Q  551 taattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaattt 622  Q
    ||||||||||||||||||||| ||  ||| |||||||| ||||| |||||| ||  ||||||| ||||||||    
T  20564908 taattaatactactaacttgtcttgaaatatgaaaagtcaaatttaatacacattcaaacaaaagacaattt 20564837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 551 - 622
Target Start/End: Complemental strand, 32144444 - 32144373
Alignment:
Q  551 taattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaattt 622  Q
    ||||||||| || |||||||| ||| ||| |||||||| |||||  ||||| ||| ||||||||||||||||    
T  32144444 taattaatattattaacttgtcttaaaatatgaaaagtcaaattttatacacatacaaacaaatgacaattt 32144373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 551 - 626
Target Start/End: Original strand, 40612929 - 40613004
Alignment:
Q  551 taattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaatttagta 626  Q
    ||||||||||||||||||| || |  ||| |||||||| |||||||||||| || ||||||||  | |||||||||    
T  40612929 taattaatactactaacttataatgaaatatgaaaagtcaaattaaatacacatttaaacaaagaataatttagta 40613004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 551 - 622
Target Start/End: Original strand, 47070931 - 47071002
Alignment:
Q  551 taattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaattt 622  Q
    ||||||||||||||||||||| ||  ||| |||||| | ||||| |||||  ||| ||||||||||||||||    
T  47070931 taattaatactactaacttgtcttgaaatatgaaaaatcaaatttaatacgcatacaaacaaatgacaattt 47071002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 551 - 622
Target Start/End: Original strand, 48721838 - 48721909
Alignment:
Q  551 taattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaattt 622  Q
    ||||||||||||||| ||||| ||  ||| |||||||| ||||| |||||| ||| ||||||| ||||||||    
T  48721838 taattaatactactatcttgtcttgaaatatgaaaagtcaaatttaatacacatacaaacaaaggacaattt 48721909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 551 - 601
Target Start/End: Original strand, 34028471 - 34028521
Alignment:
Q  551 taattaatactactaacttgtattagaatgtgaaaagttaaattaaataca 601  Q
    ||||||||||||||||||||  || |||| |||||||| ||||||||||||    
T  34028471 taattaatactactaacttgccttggaatatgaaaagtcaaattaaataca 34028521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 551 - 613
Target Start/End: Original strand, 44652831 - 44652893
Alignment:
Q  551 taattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaa 613  Q
    ||||||||||||||||||||| ||  ||| |||||||| ||||| |||||| ||| |||||||    
T  44652831 taattaatactactaacttgttttgaaatatgaaaagtcaaatttaatacacatacaaacaaa 44652893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 554 - 622
Target Start/End: Original strand, 5321996 - 5322064
Alignment:
Q  554 ttaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaattt 622  Q
    |||||||||||| ||||| ||  ||| |||||||| || || |||||||||| |||||||| |||||||    
T  5321996 ttaatactactatcttgtcttgaaatatgaaaagtcaattttaatacatatacaaacaaataacaattt 5322064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 553 - 626
Target Start/End: Original strand, 5866 - 5939
Alignment:
Q  553 attaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaatttagta 626  Q
    ||||||||||||||||||||||| | | |||||||| |||||||||||| |||| ||||||  |||||||||||    
T  5866 attaatactactaacttgtattaaattatgaaaagtcaaattaaatacacatatgaacaaagaacaatttagta 5939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 549 - 626
Target Start/End: Complemental strand, 1763949 - 1763872
Alignment:
Q  549 cttaattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaatttagta 626  Q
    ||||||||||||||||||||||| ||  ||| |||||||| ||||| |||||| ||| ||||||| ||||||||||||    
T  1763949 cttaattaatactactaacttgtcttgaaatttgaaaagtcaaatttaatacacatacaaacaaaggacaatttagta 1763872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 551 - 623
Target Start/End: Original strand, 197423 - 197495
Alignment:
Q  551 taattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaattta 623  Q
    ||||||||||||||||||||| ||| |||   |||| ||||||| |||||| ||| |||||||||||||||||    
T  197423 taattaatactactaacttgtcttaaaattgaaaaaattaaatttaatacacatacaaacaaatgacaattta 197495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 551 - 623
Target Start/End: Complemental strand, 3729556 - 3729484
Alignment:
Q  551 taattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaattta 623  Q
    ||||||||| ||||||||||| ||  ||| || ||||||||||| |||||| ||| |||||||||||||||||    
T  3729556 taattaatattactaacttgtcttgaaatatgtaaagttaaatttaatacacatacaaacaaatgacaattta 3729484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 551 - 626
Target Start/End: Original strand, 31152960 - 31153035
Alignment:
Q  551 taattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaatttagta 626  Q
    ||||||||| || |||||||| ||| ||| |||||||| ||||| |||||| ||| |||||||| |||||||||||    
T  31152960 taattaatattattaacttgttttaaaatatgaaaagtcaaatttaatacacatacaaacaaataacaatttagta 31153035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 551 - 622
Target Start/End: Original strand, 31945884 - 31945955
Alignment:
Q  551 taattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaattt 622  Q
    ||||||||||||||||||||| ||  ||| || ||||| ||||| |||||| ||||||||||| ||||||||    
T  31945884 taattaatactactaacttgtcttgaaatatgtaaagtcaaatttaatacacatataaacaaacgacaattt 31945955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 551 - 622
Target Start/End: Complemental strand, 16327258 - 16327186
Alignment:
Q  551 taattaatactac-taacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaattt 622  Q
    ||||||||||||  |||||||| ||  ||| |||||||||||||| |||||| ||| ||||||||||||||||    
T  16327258 taattaatactaaataacttgtcttgaaatatgaaaagttaaatttaatacaaatacaaacaaatgacaattt 16327186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 551 - 622
Target Start/End: Complemental strand, 16350656 - 16350584
Alignment:
Q  551 taattaatactac-taacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaattt 622  Q
    ||||||||||||  |||||||| ||  ||| |||||||||||||| |||||| ||| ||||||||||||||||    
T  16350656 taattaatactaaataacttgtcttgaaatatgaaaagttaaatttaatacaaatacaaacaaatgacaattt 16350584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 551 - 622
Target Start/End: Complemental strand, 15981928 - 15981857
Alignment:
Q  551 taattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaattt 622  Q
    |||||||||||| |||||||| ||  ||| |||||||||||||| || ||| ||| |||| |||||||||||    
T  15981928 taattaatactattaacttgtcttgaaatatgaaaagttaaatttaagacacatacaaactaatgacaattt 15981857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 551 - 622
Target Start/End: Complemental strand, 31536146 - 31536075
Alignment:
Q  551 taattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaattt 622  Q
    ||||||||||||||||||| | ||  ||| |||||||| ||||| |||||| ||||||||||| || |||||    
T  31536146 taattaatactactaacttatcttgaaatatgaaaagtcaaatttaatacacatataaacaaaagataattt 31536075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 549 - 626
Target Start/End: Complemental strand, 29644055 - 29643979
Alignment:
Q  549 cttaattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaatttagta 626  Q
    |||||||||||||| ||| ||| ||| |||| |||||| | |||||||||||| ||| ||||||| |||||| |||||    
T  29644055 cttaattaatactaataatttgcattggaatatgaaaaatcaaattaaataca-atacaaacaaaagacaatatagta 29643979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 549 - 622
Target Start/End: Original strand, 30465938 - 30466011
Alignment:
Q  549 cttaattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaattt 622  Q
    ||||||||||||||||||||| | ||  ||| |||||||| ||||| |||||| ||| ||||||| || |||||    
T  30465938 cttaattaatactactaacttatcttgaaatatgaaaagtcaaatttaatacacatacaaacaaaagataattt 30466011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 551 - 616
Target Start/End: Complemental strand, 31039280 - 31039215
Alignment:
Q  551 taattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatga 616  Q
    |||| |||||||||||||||| ||  ||| |||||||| ||||||||| || ||| ||||||||||    
T  31039280 taatcaatactactaacttgtcttgaaatatgaaaagtcaaattaaatgcacatacaaacaaatga 31039215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 551 - 603
Target Start/End: Complemental strand, 30248996 - 30248944
Alignment:
Q  551 taattaatactactaacttgtattagaatgtgaaaagttaaattaaatacata 603  Q
    ||||||||||||||||||||| ||  ||| |||||||| ||||| ||||||||    
T  30248996 taattaatactactaacttgtcttgaaatatgaaaagtcaaatttaatacata 30248944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 19)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 550 - 626
Target Start/End: Complemental strand, 21388377 - 21388301
Alignment:
Q  550 ttaattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaatttagta 626  Q
    |||||||||||||||||||| | ||| ||| |||||||| ||||| |||||| ||| ||||||| ||||||||||||    
T  21388377 ttaattaatactactaacttatcttaaaatttgaaaagtcaaatttaatacacatacaaacaaaggacaatttagta 21388301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 551 - 622
Target Start/End: Complemental strand, 1324842 - 1324771
Alignment:
Q  551 taattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaattt 622  Q
    ||||||||||||||||||||| ||  ||| |||||||| ||||| |||||| ||| ||||||||||||||||    
T  1324842 taattaatactactaacttgtcttgaaatatgaaaagtcaaatttaatacacatacaaacaaatgacaattt 1324771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 551 - 626
Target Start/End: Original strand, 21809618 - 21809693
Alignment:
Q  551 taattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaatttagta 626  Q
    ||||||||||||||||||||| ||  ||| |||||||| ||||| |||||| ||| ||||||| ||||||||||||    
T  21809618 taattaatactactaacttgttttgaaatatgaaaagtcaaatttaatacacatacaaacaaaggacaatttagta 21809693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 551 - 622
Target Start/End: Complemental strand, 33181429 - 33181358
Alignment:
Q  551 taattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaattt 622  Q
    ||||||||| ||||||||||| ||| | | |||||||||||||| |||||| ||| ||||||||||||||||    
T  33181429 taattaatattactaacttgtcttaaagtatgaaaagttaaatttaatacacatacaaacaaatgacaattt 33181358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 551 - 622
Target Start/End: Complemental strand, 37048169 - 37048098
Alignment:
Q  551 taattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaattt 622  Q
    ||||||||||||||||||||||||  ||| |||| ||||||||| |||||| ||| ||||||| ||||||||    
T  37048169 taattaatactactaacttgtattgaaatatgaatagttaaatttaatacacatacaaacaaaggacaattt 37048098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 551 - 613
Target Start/End: Original strand, 26200939 - 26201001
Alignment:
Q  551 taattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaa 613  Q
    ||||||||||||||||||||| ||| ||| |||||||||||||| |||||| ||| |||||||    
T  26200939 taattaatactactaacttgttttaaaatatgaaaagttaaatttaatacacatacaaacaaa 26201001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 565 - 626
Target Start/End: Original strand, 6376118 - 6376179
Alignment:
Q  565 aacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaatttagta 626  Q
    ||||||| ||| ||| |||||||||||||| |||||| ||| ||||||||||||||||||||    
T  6376118 aacttgtcttaaaatttgaaaagttaaatttaatacacatacaaacaaatgacaatttagta 6376179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 550 - 623
Target Start/End: Original strand, 42983584 - 42983657
Alignment:
Q  550 ttaattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaattta 623  Q
    |||||||||||||||||||||| ||  ||| |||||||| ||||| |||||| ||| ||||| | |||||||||    
T  42983584 ttaattaatactactaacttgtcttgaaatatgaaaagtcaaatttaatacacatacaaacataagacaattta 42983657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 551 - 622
Target Start/End: Original strand, 27162874 - 27162946
Alignment:
Q  551 taattaatactactaacttgtattagaatgtgaaaa-gttaaattaaatacatatataaacaaatgacaattt 622  Q
    |||||||||||| |||||||| ||  ||| |||||| |||||||| |||||| ||| ||||||||||||||||    
T  27162874 taattaatactattaacttgtcttgaaatatgaaaaagttaaatttaatacacatacaaacaaatgacaattt 27162946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 554 - 622
Target Start/End: Original strand, 43601139 - 43601207
Alignment:
Q  554 ttaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaattt 622  Q
    |||||| ||||||||||| ||  ||| |||||||| ||||| |||||| ||||||||||| ||||||||    
T  43601139 ttaatattactaacttgtcttgaaatatgaaaagtcaaatttaatacacatataaacaaaggacaattt 43601207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 551 - 622
Target Start/End: Original strand, 4089471 - 4089542
Alignment:
Q  551 taattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaattt 622  Q
    ||||||||||||||| ||||| ||  ||| |||||||| ||||| |||||||||| ||||||| || |||||    
T  4089471 taattaatactactatcttgtcttgaaatatgaaaagtcaaatttaatacatatacaaacaaaagataattt 4089542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 551 - 626
Target Start/End: Original strand, 10408539 - 10408614
Alignment:
Q  551 taattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaatttagta 626  Q
    |||||||||||||||||||| |||  ||| |||||| | ||||| |||||| ||| ||||||| ||||| ||||||    
T  10408539 taattaatactactaacttgcattgaaatatgaaaaatcaaatttaatacacatacaaacaaaggacaaattagta 10408614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 551 - 622
Target Start/End: Original strand, 13907714 - 13907785
Alignment:
Q  551 taattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaattt 622  Q
    ||||||||||||||||||||| ||  ||| |||||||| ||||| | || | ||| ||||||||||||||||    
T  13907714 taattaatactactaacttgtctttaaatatgaaaagtcaaatttattaaacatacaaacaaatgacaattt 13907785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 551 - 622
Target Start/End: Complemental strand, 40263845 - 40263774
Alignment:
Q  551 taattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaattt 622  Q
    ||||||||||||||| ||| | ||  ||| |||||||| ||||| |||||| ||| ||||||||||||||||    
T  40263845 taattaatactactatcttatcttgaaatatgaaaagtcaaatttaatacacatacaaacaaatgacaattt 40263774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 551 - 613
Target Start/End: Original strand, 28038859 - 28038921
Alignment:
Q  551 taattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaa 613  Q
    ||||||||||| ||||||||| ||  ||| |||||||||||||| |||||| ||| |||||||    
T  28038859 taattaatactgctaacttgtcttgaaatatgaaaagttaaatttaatacaaatacaaacaaa 28038921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 549 - 622
Target Start/End: Original strand, 2276546 - 2276619
Alignment:
Q  549 cttaattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaattt 622  Q
    |||||||||||||| |||||| | ||  ||| |||||||| ||||| |||||| ||| ||||||| ||||||||    
T  2276546 cttaattaatactagtaacttatcttgaaatttgaaaagtcaaatttaatacacatacaaacaaaggacaattt 2276619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 582 - 626
Target Start/End: Complemental strand, 23876140 - 23876096
Alignment:
Q  582 gaaaagttaaattaaatacatatataaacaaatgacaatttagta 626  Q
    ||||||||||||| |||||| ||| ||||||| ||||||||||||    
T  23876140 gaaaagttaaatttaatacacatacaaacaaaagacaatttagta 23876096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 590 - 626
Target Start/End: Original strand, 26830132 - 26830168
Alignment:
Q  590 aaattaaatacatatataaacaaatgacaatttagta 626  Q
    |||||||||||| |||||||||||||| |||||||||    
T  26830132 aaattaaatacacatataaacaaatgataatttagta 26830168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 551 - 599
Target Start/End: Original strand, 39102750 - 39102798
Alignment:
Q  551 taattaatactactaacttgtattagaatgtgaaaagttaaattaaata 599  Q
    ||||||||||||||||||||| || |||| | |||||| ||||||||||    
T  39102750 taattaatactactaacttgtcttggaatataaaaagtcaaattaaata 39102798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 551 - 622
Target Start/End: Original strand, 36309568 - 36309639
Alignment:
Q  551 taattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaattt 622  Q
    ||||||||| ||||||||||| ||| ||| |||||||| ||||| |||||| ||| ||||||||||||||||    
T  36309568 taattaataatactaacttgtcttaaaatatgaaaagtcaaatttaatacacatacaaacaaatgacaattt 36309639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 551 - 626
Target Start/End: Complemental strand, 12762976 - 12762901
Alignment:
Q  551 taattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaatttagta 626  Q
    ||||||||| ||||||||||| ||  ||| |||||||| ||||| |||||| ||| ||||||| ||||||||||||    
T  12762976 taattaatattactaacttgtcttgaaatatgaaaagtcaaatttaatacacatacaaacaaaggacaatttagta 12762901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 551 - 626
Target Start/End: Original strand, 23399749 - 23399824
Alignment:
Q  551 taattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaatttagta 626  Q
    ||||||||||||||||||||  ||  ||| |||||||| ||||| |||||| ||| ||||||| ||||||||||||    
T  23399749 taattaatactactaacttggtttgaaatatgaaaagtcaaatttaatacacatacaaacaaaggacaatttagta 23399824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 551 - 622
Target Start/End: Original strand, 30262510 - 30262581
Alignment:
Q  551 taattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaattt 622  Q
    ||||||||||||||||||||| ||  ||| |||||||||| ||| || ||| ||| ||||||||||||||||    
T  30262510 taattaatactactaacttgtcttgaaatttgaaaagttagatttaagacacatacaaacaaatgacaattt 30262581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 551 - 622
Target Start/End: Original strand, 38761330 - 38761401
Alignment:
Q  551 taattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaattt 622  Q
    ||||||||||||||| ||||| ||  ||| |||||||| ||||| |||||| ||| ||||||||||||||||    
T  38761330 taattaatactactatcttgtcttgaaatatgaaaagtcaaatttaatacacatacaaacaaatgacaattt 38761401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 551 - 626
Target Start/End: Original strand, 43191449 - 43191524
Alignment:
Q  551 taattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaatttagta 626  Q
    |||||||| |||||||||| | ||  ||| |||||| ||||||| |||||| ||| ||||||||||||||||||||    
T  43191449 taattaatcctactaacttatcttgaaatatgaaaatttaaatttaatacacatacaaacaaatgacaatttagta 43191524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 551 - 608
Target Start/End: Original strand, 7727321 - 7727378
Alignment:
Q  551 taattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataa 608  Q
    ||||||||||||||||||||| || |||| |||||||| |||| ||||||| ||||||    
T  7727321 taattaatactactaacttgtcttggaatatgaaaagtcaaatgaaatacacatataa 7727378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 549 - 622
Target Start/End: Original strand, 45185237 - 45185310
Alignment:
Q  549 cttaattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaattt 622  Q
    |||||| |||||||||||||||| ||| ||| |||||||| ||| | |||||| ||| ||||||| ||||||||    
T  45185237 cttaatcaatactactaacttgtcttaaaatttgaaaagtcaaaatgaatacacatacaaacaaaggacaattt 45185310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 551 - 622
Target Start/End: Original strand, 2562701 - 2562773
Alignment:
Q  551 taattaatactactaacttgtattag-aatgtgaaaagttaaattaaatacatatataaacaaatgacaattt 622  Q
    ||||||||||||||| ||||| |||| ||| |||||||| ||||| |||||| ||| ||||||| ||||||||    
T  2562701 taattaatactactatcttgtcttagtaatatgaaaagtcaaatttaatacacatacaaacaaaggacaattt 2562773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 551 - 626
Target Start/End: Complemental strand, 27699 - 27624
Alignment:
Q  551 taattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaatttagta 626  Q
    |||||||| ||||||| |||| ||  ||| | |||| | ||||| |||||||| ||||||||||||||||||||||    
T  27699 taattaattctactaatttgttttgtaatataaaaaatcaaatttaatacatacataaacaaatgacaatttagta 27624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 551 - 622
Target Start/End: Original strand, 24276529 - 24276600
Alignment:
Q  551 taattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaattt 622  Q
    ||||||||| ||||||||||| ||  ||| || ||||| ||||| |||||| ||| ||||||||||||||||    
T  24276529 taattaatattactaacttgttttgaaatatgtaaagtaaaatttaatacacatacaaacaaatgacaattt 24276600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 551 - 622
Target Start/End: Original strand, 31746377 - 31746448
Alignment:
Q  551 taattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaattt 622  Q
    ||||||||| ||||||||||  ||  ||| |||||||| ||||| |||||| ||| ||||||||||||||||    
T  31746377 taattaataatactaacttgctttgaaatatgaaaagtcaaatttaatacacatacaaacaaatgacaattt 31746448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 555 - 622
Target Start/End: Complemental strand, 36437631 - 36437564
Alignment:
Q  555 taatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaattt 622  Q
    ||||||||||||||||| ||  ||| |||||||| ||||| |||||| ||| ||||||| ||||||||    
T  36437631 taatactactaacttgtcttgaaatatgaaaagtcaaatttaatacacatacaaacaaaggacaattt 36437564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 551 - 622
Target Start/End: Complemental strand, 40517874 - 40517803
Alignment:
Q  551 taattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaattt 622  Q
    ||||||||||||||||||||| ||  ||| | |||||| ||||| |||||| ||| ||||||| ||||||||    
T  40517874 taattaatactactaacttgtcttgaaatttaaaaagtcaaatttaatacacatacaaacaaaggacaattt 40517803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 560 - 622
Target Start/End: Original strand, 45183842 - 45183904
Alignment:
Q  560 ctactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaattt 622  Q
    |||||||||||| ||  ||| |||||||| ||||| |||||| ||||||||||| ||||||||    
T  45183842 ctactaacttgtcttcaaatttgaaaagtcaaatttaatacacatataaacaaaggacaattt 45183904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 549 - 622
Target Start/End: Complemental strand, 885597 - 885524
Alignment:
Q  549 cttaattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaattt 622  Q
    |||||||||||| ||||| |||| ||  ||| |||||||| ||||| |||||| ||| ||||||| ||||||||    
T  885597 cttaattaataccactaatttgtcttgaaatttgaaaagtcaaatttaatacacatacaaacaaaggacaattt 885524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 551 - 620
Target Start/End: Complemental strand, 25888729 - 25888660
Alignment:
Q  551 taattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaat 620  Q
    ||||||||| |||||| |||| ||| ||| |||||| | ||||| |||||| ||| ||||||||||||||    
T  25888729 taattaatagtactaatttgtcttaaaatatgaaaaatcaaatttaatacacatacaaacaaatgacaat 25888660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 549 - 614
Target Start/End: Complemental strand, 33385382 - 33385317
Alignment:
Q  549 cttaattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaat 614  Q
    ||||||||||||||||||||||| ||  |||  ||||||| ||||| |||| | ||||||||||||    
T  33385382 cttaattaatactactaacttgtcttgaaatacgaaaagtcaaatttaatatacatataaacaaat 33385317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 549 - 622
Target Start/End: Original strand, 40337161 - 40337234
Alignment:
Q  549 cttaattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaattt 622  Q
    |||||||||||||| || ||||| ||  ||| |||||||| || ||||||||| ||| ||||||| ||||||||    
T  40337161 cttaattaatactattatcttgtcttgaaatatgaaaagtcaatttaaatacacatacaaacaaaggacaattt 40337234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 549 - 622
Target Start/End: Complemental strand, 41087110 - 41087037
Alignment:
Q  549 cttaattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaattt 622  Q
    ||||||||||||||||||||||| ||  ||| |||||| | ||||| |||||| ||| ||||||| || |||||    
T  41087110 cttaattaatactactaacttgtcttgaaatatgaaaaatcaaatttaatacacatacaaacaaaggaaaattt 41087037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 550 - 622
Target Start/End: Original strand, 3113504 - 3113576
Alignment:
Q  550 ttaattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaattt 622  Q
    |||||||||||||  ||||| | ||  ||| |||||| ||||||| |||||| ||||||||||| ||||||||    
T  3113504 ttaattaatactataaacttatcttgaaatatgaaaaattaaatttaatacacatataaacaaaagacaattt 3113576  T

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Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 554 - 622
Target Start/End: Complemental strand, 40790919 - 40790851
Alignment:
Q  554 ttaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaattt 622  Q
    ||||||||||||| |||| ||  ||| |||| ||| ||||| | |||||||| ||||||||||||||||    
T  40790919 ttaatactactaagttgtcttgaaatatgaatagtcaaatttattacatatacaaacaaatgacaattt 40790851  T

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Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 551 - 619
Target Start/End: Complemental strand, 45203892 - 45203824
Alignment:
Q  551 taattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaa 619  Q
    ||||||||||||||||||||| ||  ||| |||||||| ||||| |||||  ||| ||||||| |||||    
T  45203892 taattaatactactaacttgtcttgaaatatgaaaagtcaaatttaatacgcatacaaacaaaggacaa 45203824  T

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Target: scaffold0699 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0699
Description:

Target: scaffold0699; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 554 - 622
Target Start/End: Complemental strand, 7708 - 7640
Alignment:
Q  554 ttaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaattt 622  Q
    |||||| ||||||||||| ||  ||| |||||||| ||||| |||||| ||||||||||| ||||||||    
T  7708 ttaatattactaacttgtcttgaaatatgaaaagtcaaatttaatacacatataaacaaaggacaattt 7640  T

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Target: scaffold0012 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 551 - 622
Target Start/End: Original strand, 99788 - 99859
Alignment:
Q  551 taattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaattt 622  Q
    ||||||||||||||||||||| ||  ||| |||||||| ||||| |||||| ||  ||||||| ||||||||    
T  99788 taattaatactactaacttgtcttgaaatatgaaaagtcaaatttaatacacattcaaacaaaagacaattt 99859  T

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Target: scaffold0005 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 557 - 622
Target Start/End: Complemental strand, 214746 - 214681
Alignment:
Q  557 atactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaattt 622  Q
    ||||||||||||| | ||| ||| | |||||| ||||| |||||| ||| ||||||||||||||||    
T  214746 atactactaacttatcttaaaatataaaaagtcaaatttaatacacatacaaacaaatgacaattt 214681  T

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Target: scaffold0013 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 551 - 623
Target Start/End: Original strand, 61253 - 61325
Alignment:
Q  551 taattaatactactaacttgtattagaatgtgaaaagttaaattaaatacatatataaacaaatgacaattta 623  Q
    ||||||||| |||||| || | ||| | | |||||||||||||| |||||| ||||||| ||| |||||||||    
T  61253 taattaatattactaatttattttaaattatgaaaagttaaatttaatacacatataaataaaggacaattta 61325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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