View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20426_high_11 (Length: 255)
Name: NF20426_high_11
Description: NF20426
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20426_high_11 |
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Alignment Details
Target: chr2 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 19 - 241
Target Start/End: Complemental strand, 32853859 - 32853637
Alignment:
| Q |
19 |
ttagtacttgtacttaaccgaccaggaacaccaacacgtgtctcatttcaccaactggtctctatctatctaatagtacattttctccaacgcatcatca |
118 |
Q |
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| T |
32853859 |
ttagtacttgtacttaaccgaccaggaacaccaacacgtgtctcatttcaccaactggtctctatctatctaatagtacattttctccaacgcatcatca |
32853760 |
T |
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| Q |
119 |
aatccaatatctgaattctgaaacttccattcccttttgaagtgagagaaaatgggaagaatctttgtggttgagctggagggcaggttctatagatgca |
218 |
Q |
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| T |
32853759 |
aattcaatatctgaattctgaaacttccattcccttttgaagtgagagaaaatgggaagaatctttgtggttgagctggagggcaggtcctatagatgca |
32853660 |
T |
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| Q |
219 |
aattctgcagaactcatttggcc |
241 |
Q |
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| T |
32853659 |
aattctgcagaactcatttggcc |
32853637 |
T |
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