View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20426_high_7 (Length: 302)
Name: NF20426_high_7
Description: NF20426
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20426_high_7 |
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Alignment Details
Target: chr7 (Bit Score: 200; Significance: 1e-109; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 83 - 286
Target Start/End: Original strand, 10335274 - 10335477
Alignment:
| Q |
83 |
acataacactcatcgagttccgacgggtcaaaaaactcgtcggaactggtccaacaacctatcctgtaataggttgtttaatatctttctacaagaatcg |
182 |
Q |
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| T |
10335274 |
acataacactcatcgagttccgacgggtcaaaaaactcgtcggaactggtccaacaacctatcctgtaataggttgtttaatatctttctacaagaatcg |
10335373 |
T |
|
| Q |
183 |
ttttcggttgctagactggtataccaagcttttagcccaatcgccaaccaataccatattggttcaacgattaggcgcacgtagaaccattgtaacggca |
282 |
Q |
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||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10335374 |
ttttcggttgctagattggtataccaagcttttagcccaatcgccaaccaataccatattggttcaacgattaggcgcacgtagaaccattgtaacggca |
10335473 |
T |
|
| Q |
283 |
aatc |
286 |
Q |
| |
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|||| |
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| T |
10335474 |
aatc |
10335477 |
T |
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